Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:41:51 (4037968): wrapper (7.7.26015): starting
07:41:51 (4037968): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:41:51] Arguments: --nthreads 8
[2025-06-04 07:41:51] Threads: 8
[2025-06-04 07:41:51] Checking for CVMFS
[2025-06-04 07:41:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:41:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:41:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:41:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:41:52] 2.12.6.0 912492 23252 441868 146779 3 509 28640469 40960000 12475 16776704 0 111567535 99.718 81551065 26933 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:41:52] CVMFS is ok
[2025-06-04 07:41:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:41:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:41:52] Further information can be found at the LHC@home message board.
[2025-06-04 07:41:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:41:52] Checking for apptainer binary...
[2025-06-04 07:41:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:41:52] Running /usr/bin/apptainer --version
[2025-06-04 07:41:52] apptainer version 1.4.1-1.el9
[2025-06-04 07:41:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:41:52] c7-10-12.aglt2.org
[2025-06-04 07:41:52] apptainer works
[2025-06-04 07:41:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:41:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:41:52] Starting ATLAS job with PandaID=6678285472
[2025-06-04 07:41:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:42:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:42:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:42:04]  is_altstaged=None
[2025-06-04 08:42:04]  is_tar=False
[2025-06-04 08:42:04]  lfn=log.45006595._050681.job.log.tgz.1
[2025-06-04 08:42:04]  mtime=0
[2025-06-04 08:42:04]  protocol_id=None
[2025-06-04 08:42:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:42:04]  replicas=None
[2025-06-04 08:42:04]  scope=mc23_13p6TeV
[2025-06-04 08:42:04]  status=None
[2025-06-04 08:42:04]  status_code=0
[2025-06-04 08:42:04]  storage_token=
[2025-06-04 08:42:04]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678285472/log.45006595._050681.job.log.tgz.1
[2025-06-04 08:42:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/2c/log.45006595._050681.job.log.tgz.1
[2025-06-04 08:42:04]  workdir=None
[2025-06-04 08:42:04] ]
[2025-06-04 08:42:04] 2025-06-04 12:41:37,459 | INFO     | transferring file log.45006595._050681.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678285472/log.45006595._050681.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:42:04] 2025-06-04 12:41:37,459 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678285472/log.45006595._050681.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._050681.job
[2025-06-04 08:42:04] 2025-06-04 12:41:37,481 | INFO     | adding to output.list: log.45006595._050681.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/2c/log.45006595._050681.job.log.tg
[2025-06-04 08:42:04] 2025-06-04 12:41:37,482 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:42:04] 2025-06-04 12:41:37,482 | INFO     | summary of transferred files:
[2025-06-04 08:42:04] 2025-06-04 12:41:37,482 | INFO     |  -- lfn=log.45006595._050681.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:42:04] 2025-06-04 12:41:37,482 | INFO     | stage-out finished correctly
[2025-06-04 08:42:04] 2025-06-04 12:41:37,555 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:42:04] 2025-06-04 12:41:37,952 | INFO     | PID=4045492 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 08:42:04] 2025-06-04 12:41:37,952 | INFO     | .. there are 21 such processes running
[2025-06-04 08:42:04] 2025-06-04 12:41:39,318 | INFO     | job 6678285472 has state=finished
[2025-06-04 08:42:04] 2025-06-04 12:41:39,319 | INFO     | preparing for final server update for job 6678285472 in state='finished'
[2025-06-04 08:42:04] 2025-06-04 12:41:39,319 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:42:04] 2025-06-04 12:41:39,319 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:42:04] 2025-06-04 12:41:39,319 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:42:04] 2025-06-04 12:41:39,319 | INFO     | job 6678285472 has finished - writing final server update
[2025-06-04 08:42:04] 2025-06-04 12:41:39,320 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:42:04] 2025-06-04 12:41:39,336 | INFO     | executing command: lscpu
[2025-06-04 08:42:04] 2025-06-04 12:41:39,407 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:42:04] 2025-06-04 12:41:39,768 | INFO     | monitor loop #267: job 0:6678285472 is in state 'finished'
[2025-06-04 08:42:04] 2025-06-04 12:41:39,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:42:04] 2025-06-04 12:41:42,271 | INFO     | monitor loop #268: job 0:6678285472 is in state 'finished'
[2025-06-04 08:42:04] 2025-06-04 12:41:42,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:42:04] 2025-06-04 12:41:43,634 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:42:04] 2025-06-04 12:41:43,634 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678285472/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:42:04] 2025-06-04 12:41:43,635 | INFO     | extracted standard info from prmon json
[2025-06-04 08:42:04] 2025-06-04 12:41:43,635 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:42:04] 2025-06-04 12:41:43,635 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:42:04] 2025-06-04 12:41:43,635 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:42:04] 2025-06-04 12:41:43,635 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:42:04] 2025-06-04 12:41:43,637 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:42:04] 2025-06-04 12:41:43,637 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 08:42:04] 2025-06-04 12:41:43,637 | INFO     | sum of deviations: 539555186.9999998
[2025-06-04 08:42:04] 2025-06-04 12:41:43,637 | INFO     | mean x: 1749039212.5
[2025-06-04 08:42:04] 2025-06-04 12:41:43,637 | INFO     | mean y: 2272013.230769231
[2025-06-04 08:42:04] 2025-06-04 12:41:43,637 | INFO     | -- intersect: -21650205931.425064
[2025-06-04 08:42:04] 2025-06-04 12:41:43,637 | INFO     | intersect: -21650205931.425064
[2025-06-04 08:42:04] 2025-06-04 12:41:43,638 | INFO     | chi2: 0.7244852319833989
[2025-06-04 08:42:04] 2025-06-04 12:41:43,638 | INFO     | -- intersect: -21650205931.425064
[2025-06-04 08:42:04] 2025-06-04 12:41:43,638 | INFO     | current memory leak: 12.38 B/s (using 52 data points, chi2=0.72)
[2025-06-04 08:42:04] 2025-06-04 12:41:43,638 | INFO     | ..............................
[2025-06-04 08:42:04] 2025-06-04 12:41:43,638 | INFO     | . Timing measurements:
[2025-06-04 08:42:04] 2025-06-04 12:41:43,638 | INFO     | . get job = 0 s
[2025-06-04 08:42:04] 2025-06-04 12:41:43,638 | INFO     | . initial setup = 2 s
[2025-06-04 08:42:04] 2025-06-04 12:41:43,638 | INFO     | . payload setup = 7 s
[2025-06-04 08:42:04] 2025-06-04 12:41:43,638 | INFO     | . stage-in = 0 s
[2025-06-04 08:42:04] 2025-06-04 12:41:43,638 | INFO     | . payload execution = 3545 s
[2025-06-04 08:42:04] 2025-06-04 12:41:43,639 | INFO     | . stage-out = 0 s
[2025-06-04 08:42:04] 2025-06-04 12:41:43,639 | INFO     | . log creation = 0 s
[2025-06-04 08:42:04] 2025-06-04 12:41:43,639 | INFO     | ..............................
[2025-06-04 08:42:04] 2025-06-04 12:41:43,711 | INFO     | 
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | job summary report
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | --------------------------------------------------
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | PanDA job id: 6678285472
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | task id: 45006595
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | errors: (none)
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | pilot state: finished 
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | transexitcode: 0
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | exeerrorcode: 0
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | exeerrordiag: 
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | exitcode: 0
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | exitmsg: OK
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | cpuconsumptiontime: 23189 s
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | nevents: 400
[2025-06-04 08:42:04] 2025-06-04 12:41:43,712 | INFO     | neventsw: 0
[2025-06-04 08:42:04] 2025-06-04 12:41:43,713 | INFO     | pid: 4063691
[2025-06-04 08:42:04] 2025-06-04 12:41:43,713 | INFO     | pgrp: 4063691
[2025-06-04 08:42:04] 2025-06-04 12:41:43,713 | INFO     | corecount: 8
[2025-06-04 08:42:04] 2025-06-04 12:41:43,713 | INFO     | event service: False
[2025-06-04 08:42:04] 2025-06-04 12:41:43,713 | INFO     | sizes: {0: 2397290, 5: 2397496, 11: 2397552, 3556: 2423237, 3558: 2432234, 3564: 2432348}
[2025-06-04 08:42:04] 2025-06-04 12:41:43,713 | INFO     | --------------------------------------------------
[2025-06-04 08:42:04] 2025-06-04 12:41:43,713 | INFO     | 
[2025-06-04 08:42:04] 2025-06-04 12:41:43,713 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 08:42:04] 2025-06-04 12:41:43,734 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,735 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,735 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,735 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,735 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,736 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,736 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,736 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,736 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,736 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:42:04] 2025-06-04 12:41:43,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:42:04] 2025-06-04 12:41:43,736 | INFO     | job 6678285472 has completed (purged errors)
[2025-06-04 08:42:04] 2025-06-04 12:41:43,736 | INFO     | overall cleanup function is called
[2025-06-04 08:42:04] 2025-06-04 12:41:44,744 | INFO     | --- collectZombieJob: --- 10, [4063691]
[2025-06-04 08:42:04] 2025-06-04 12:41:44,744 | INFO     | zombie collector waiting for pid 4063691
[2025-06-04 08:42:04] 2025-06-04 12:41:44,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:42:04] 2025-06-04 12:41:44,744 | INFO     | collected zombie processes
[2025-06-04 08:42:04] 2025-06-04 12:41:44,744 | INFO     | will attempt to kill all subprocesses of pid=4063691
[2025-06-04 08:42:04] 2025-06-04 12:41:44,980 | INFO     | process IDs to be killed: [4063691] (in reverse order)
[2025-06-04 08:42:04] 2025-06-04 12:41:45,083 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:42:04] 2025-06-04 12:41:45,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:42:04] 2025-06-04 12:41:45,095 | INFO     | did not find any defunct processes belonging to 4063691
[2025-06-04 08:42:04] 2025-06-04 12:41:45,104 | INFO     | did not find any defunct processes belonging to 4063691
[2025-06-04 08:42:04] 2025-06-04 12:41:45,104 | INFO     | ready for new job
[2025-06-04 08:42:04] 2025-06-04 12:41:45,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:42:04] 2025-06-04 12:41:45,105 | INFO     | **************************************
[2025-06-04 08:42:04] 2025-06-04 12:41:45,105 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:42:04] 2025-06-04 12:41:45,105 | INFO     | **************************************
[2025-06-04 08:42:04] 2025-06-04 12:41:45,105 | INFO     | 
[2025-06-04 08:42:04] 2025-06-04 12:41:45,120 | INFO     | architecture information:
[2025-06-04 08:42:04] 2025-06-04 12:41:45,121 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:42:04] 2025-06-04 12:41:45,137 | INFO     | cat /etc/os-release:
[2025-06-04 08:42:04] NAME="CentOS Linux"
[2025-06-04 08:42:04] VERSION="7 (Core)"
[2025-06-04 08:42:04] ID="centos"
[2025-06-04 08:42:04] ID_LIKE="rhel fedora"
[2025-06-04 08:42:04] VERSION_ID="7"
[2025-06-04 08:42:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:42:04] ANSI_COLOR="0;31"
[2025-06-04 08:42:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:42:04] HOME_URL="https://www.centos.org/"
[2025-06-04 08:42:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:42:04] 
[2025-06-04 08:42:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:42:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:42:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:42:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:42:04] 
[2025-06-04 08:42:04] 2025-06-04 12:41:45,138 | INFO     | **************************************
[2025-06-04 08:42:04] 2025-06-04 12:41:45,640 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 08:42:04] 2025-06-04 12:41:45,655 | INFO     | sufficient remaining disk space (85983232000 B)
[2025-06-04 08:42:04] 2025-06-04 12:41:45,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:42:04] 2025-06-04 12:41:45,655 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:42:04] 2025-06-04 12:41:45,655 | INFO     | update_server=False
[2025-06-04 08:42:04] 2025-06-04 12:41:45,655 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:42:04] 2025-06-04 12:41:45,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:42:04] 2025-06-04 12:41:45,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:42:04] 2025-06-04 12:41:45,683 | INFO     | all payload control threads have been joined
[2025-06-04 08:42:04] 2025-06-04 12:41:45,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:42:04] 2025-06-04 12:41:45,781 | INFO     | aborting loop
[2025-06-04 08:42:04] 2025-06-04 12:41:45,904 | INFO     | all data control threads have been joined
[2025-06-04 08:42:04] 2025-06-04 12:41:45,972 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:42:04] 2025-06-04 12:41:45,973 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:42:04] 2025-06-04 12:41:45,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:42:04] 2025-06-04 12:41:46,169 | INFO     | all job control threads have been joined
[2025-06-04 08:42:04] 2025-06-04 12:41:46,661 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:46,661 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:46,689 | INFO     | [payload] control thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:46,786 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:46,909 | INFO     | [data] control thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:46,966 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:47,175 | INFO     | [job] control thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:47,330 | INFO     | [job] validate thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:47,491 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:47,661 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:47,666 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:47,676 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:47,791 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:47,988 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:48,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:42:04] 2025-06-04 12:41:52,157 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:55,884 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:42:04] 2025-06-04 12:41:56,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:42:04] 2025-06-04 12:41:58,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381959026496)>', '<ExcThread(monitor, started 140381324826368)>']
[2025-06-04 08:42:04] 2025-06-04 12:41:59,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:42:04] 2025-06-04 12:41:59,031 | INFO     | [monitor] control thread has ended
[2025-06-04 08:42:04] 2025-06-04 12:42:00,496 [wrapper] supervise_pilot (15 min periods counter: 5)
[2025-06-04 08:42:04] 2025-06-04 12:42:03,852 | INFO     | all workflow threads have been joined
[2025-06-04 08:42:04] 2025-06-04 12:42:03,852 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:42:04] 2025-06-04 12:42:03,852 | INFO     | traces error code: 0
[2025-06-04 08:42:04] 2025-06-04 12:42:03,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:42:04] 2025-06-04 12:42:04,007 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:42:04] 2025-06-04 12:42:04,011 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:42:04] 2025-06-04 12:42:04,014 [wrapper] pilotpid: 4045492
[2025-06-04 08:42:04] 2025-06-04 12:42:04,017 [wrapper] Pilot exit status: 0
[2025-06-04 08:42:04] 2025-06-04 12:42:04,029 [wrapper] pandaids: 6678285472
[2025-06-04 08:42:04] 2025-06-04 12:42:04,116 [wrapper] cleanup supervisor_pilot  187117 4045493
[2025-06-04 08:42:04] 2025-06-04 12:42:04,120 [wrapper] Test setup, not cleaning
[2025-06-04 08:42:04] 2025-06-04 12:42:04,123 [wrapper] apfmon messages muted
[2025-06-04 08:42:04] 2025-06-04 12:42:04,126 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:42:04] 2025-06-04 12:42:04,129 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:42:04]  *** Error codes and diagnostics ***
[2025-06-04 08:42:04]     "exeErrorCode": 0,
[2025-06-04 08:42:04]     "exeErrorDiag": "",
[2025-06-04 08:42:04]     "pilotErrorCode": 0,
[2025-06-04 08:42:04]     "pilotErrorDiag": "",
[2025-06-04 08:42:04]  *** Listing of results directory ***
[2025-06-04 08:42:04] total 388464
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 21:59 pilot3.tar.gz
[2025-06-04 08:42:04] -rwx------. 1 boincer umatlas     37140 Jun  3 22:24 runpilot2-wrapper.sh
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 22:24 queuedata.json
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:42:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:41 run_atlas
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:41 job.xml
[2025-06-04 08:42:04] -rw-r--r--. 2 boincer umatlas 216548319 Jun  4 07:41 EVNT.45006593._000435.pool.root.1
[2025-06-04 08:42:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:41 start_atlas.sh
[2025-06-04 08:42:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:41 shared
[2025-06-04 08:42:04] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 07:41 input.tar.gz
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:41 boinc_lockfile
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 07:41 pandaJob.out
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas    986812 Jun  4 07:42 agis_schedconf.cvmfs.json
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas   1598969 Jun  4 07:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:42:04] drwx------. 4 boincer umatlas      4096 Jun  4 07:42 pilot3
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas      6897 Jun  4 08:37 init_data.xml
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas 176096223 Jun  4 08:41 HITS.45006595._050681.pool.root.1
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:41 boinc_task_state.xml
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas        95 Jun  4 08:41 pilot_heartbeat.json
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas      1023 Jun  4 08:41 memory_monitor_summary.json
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas    289975 Jun  4 08:41 log.45006595._050681.job.log.tgz.1
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas      7681 Jun  4 08:41 heartbeat.json
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:42 boinc_mmap_file
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:42 wrapper_checkpoint.txt
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas      4425 Jun  4 08:42 pilotlog.txt
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas    363765 Jun  4 08:42 log.45006595._050681.job.log.1
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas       357 Jun  4 08:42 output.list
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:42 runtime_log
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas    675840 Jun  4 08:42 result.tar.gz
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 08:42 runtime_log.err
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas       651 Jun  4 08:42 AtTLDmXysg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaumKDmfq0mpn.diag
[2025-06-04 08:42:04] -rw-r--r--. 1 boincer umatlas     21371 Jun  4 08:42 stderr.txt
[2025-06-04 08:42:04] HITS file was successfully produced:
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas 176096223 Jun  4 08:41 shared/HITS.pool.root.1
[2025-06-04 08:42:04]  *** Contents of shared directory: ***
[2025-06-04 08:42:04] total 384632
[2025-06-04 08:42:04] -rw-r--r--. 2 boincer umatlas 216548319 Jun  4 07:41 ATLAS.root_0
[2025-06-04 08:42:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:41 start_atlas.sh
[2025-06-04 08:42:04] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 07:41 input.tar.gz
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas 176096223 Jun  4 08:41 HITS.pool.root.1
[2025-06-04 08:42:04] -rw-------. 1 boincer umatlas    675840 Jun  4 08:42 result.tar.gz
08:42:06 (4037968): run_atlas exited; CPU time 23224.584757
08:42:06 (4037968): called boinc_finish(0)

</stderr_txt>
]]>

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