Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:36:16 (12310): wrapper (7.7.26015): starting
07:36:16 (12310): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:36:16] Arguments: --nthreads 8
[2025-06-04 07:36:16] Threads: 8
[2025-06-04 07:36:16] Checking for CVMFS
[2025-06-04 07:36:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:36:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:36:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:36:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:36:16] 2.12.6.0 383503 23457 596664 146779 0 197 21366375 32935937 6224 16776704 0 225141053 99.689 180701365 22405 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:36:16] CVMFS is ok
[2025-06-04 07:36:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:36:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:36:16] Further information can be found at the LHC@home message board.
[2025-06-04 07:36:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:36:16] Checking for apptainer binary...
[2025-06-04 07:36:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:36:16] Running /usr/bin/apptainer --version
[2025-06-04 07:36:16] apptainer version 1.4.1-1.el9
[2025-06-04 07:36:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:36:16] c7-2-14.aglt2.org
[2025-06-04 07:36:16] apptainer works
[2025-06-04 07:36:16] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:36:16] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:36:16] Starting ATLAS job with PandaID=6667883036
[2025-06-04 07:36:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:31:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:31:29]  mtime=0
[2025-06-04 08:31:29]  protocol_id=None
[2025-06-04 08:31:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:31:29]  replicas=None
[2025-06-04 08:31:29]  scope=mc23_13p6TeV
[2025-06-04 08:31:29]  status=None
[2025-06-04 08:31:29]  status_code=0
[2025-06-04 08:31:29]  storage_token=
[2025-06-04 08:31:29]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6667883036/log.44871837._076341.job.log.tgz.1
[2025-06-04 08:31:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/3a/log.44871837._076341.job.log.tgz.1
[2025-06-04 08:31:29]  workdir=None
[2025-06-04 08:31:29] ]
[2025-06-04 08:31:29] 2025-06-04 12:31:01,397 | INFO     | transferring file log.44871837._076341.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6667883036/log.44871837._076341.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:31:29] 2025-06-04 12:31:01,397 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6667883036/log.44871837._076341.job.log.tgz.1 /tmp/boinchome/slots/2/log.44871837._076341.job
[2025-06-04 08:31:29] 2025-06-04 12:31:01,410 | INFO     | adding to output.list: log.44871837._076341.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/3a/log.44871837._076341.job.log.tg
[2025-06-04 08:31:29] 2025-06-04 12:31:01,411 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:31:29] 2025-06-04 12:31:01,411 | INFO     | summary of transferred files:
[2025-06-04 08:31:29] 2025-06-04 12:31:01,411 | INFO     |  -- lfn=log.44871837._076341.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:31:29] 2025-06-04 12:31:01,411 | INFO     | stage-out finished correctly
[2025-06-04 08:31:29] 2025-06-04 12:31:01,673 | WARNING  | process 23679 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:31:29] 2025-06-04 12:31:01,673 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6667883036/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:31:29] 2025-06-04 12:31:01,898 | INFO     | number of running child processes to parent process 23679: 1
[2025-06-04 08:31:29] 2025-06-04 12:31:01,898 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:31:29] 2025-06-04 12:31:03,604 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:31:29] 2025-06-04 12:31:04,401 | INFO     | monitor loop #247: job 0:6667883036 is in state 'finished'
[2025-06-04 08:31:29] 2025-06-04 12:31:04,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:31:29] 2025-06-04 12:31:06,200 | INFO     | job 6667883036 has state=finished
[2025-06-04 08:31:29] 2025-06-04 12:31:06,200 | INFO     | preparing for final server update for job 6667883036 in state='finished'
[2025-06-04 08:31:29] 2025-06-04 12:31:06,201 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:31:29] 2025-06-04 12:31:06,201 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:31:29] 2025-06-04 12:31:06,201 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:31:29] 2025-06-04 12:31:06,201 | INFO     | job 6667883036 has finished - writing final server update
[2025-06-04 08:31:29] 2025-06-04 12:31:06,201 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:31:29] 2025-06-04 12:31:06,217 | INFO     | executing command: lscpu
[2025-06-04 08:31:29] 2025-06-04 12:31:06,287 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:31:29] 2025-06-04 12:31:06,904 | INFO     | monitor loop #248: job 0:6667883036 is in state 'finished'
[2025-06-04 08:31:29] 2025-06-04 12:31:06,905 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:31:29] 2025-06-04 12:31:09,143 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:31:29] 2025-06-04 12:31:09,144 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6667883036/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:31:29] 2025-06-04 12:31:09,144 | INFO     | extracted standard info from prmon json
[2025-06-04 08:31:29] 2025-06-04 12:31:09,144 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:31:29] 2025-06-04 12:31:09,144 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:31:29] 2025-06-04 12:31:09,145 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:31:29] 2025-06-04 12:31:09,145 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:31:29] 2025-06-04 12:31:09,146 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:31:29] 2025-06-04 12:31:09,146 | INFO     | sum of square deviations: 32179208.0
[2025-06-04 08:31:29] 2025-06-04 12:31:09,146 | INFO     | sum of deviations: 3152896019.9999995
[2025-06-04 08:31:29] 2025-06-04 12:31:09,146 | INFO     | mean x: 1749038713.0
[2025-06-04 08:31:29] 2025-06-04 12:31:09,146 | INFO     | mean y: 2229756.638297872
[2025-06-04 08:31:29] 2025-06-04 12:31:09,146 | INFO     | -- intersect: -171367345188.8862
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | intersect: -171367345188.8862
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | chi2: 0.7785871488127138
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | -- intersect: -171367345188.8862
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | current memory leak: 97.98 B/s (using 47 data points, chi2=0.78)
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | ..............................
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | . Timing measurements:
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | . get job = 0 s
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | . initial setup = 2 s
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | . payload setup = 4 s
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | . stage-in = 0 s
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | . payload execution = 3256 s
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | . stage-out = 0 s
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | . log creation = 0 s
[2025-06-04 08:31:29] 2025-06-04 12:31:09,147 | INFO     | ..............................
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | 
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | job summary report
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | --------------------------------------------------
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | PanDA job id: 6667883036
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | task id: 44871837
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | errors: (none)
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | pilot state: finished 
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | transexitcode: 0
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | exeerrorcode: 0
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | exeerrordiag: 
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | exitcode: 0
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | exitmsg: OK
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | cpuconsumptiontime: 21740 s
[2025-06-04 08:31:29] 2025-06-04 12:31:09,659 | INFO     | nevents: 400
[2025-06-04 08:31:29] 2025-06-04 12:31:09,660 | INFO     | neventsw: 0
[2025-06-04 08:31:29] 2025-06-04 12:31:09,660 | INFO     | pid: 23679
[2025-06-04 08:31:29] 2025-06-04 12:31:09,660 | INFO     | pgrp: 23679
[2025-06-04 08:31:29] 2025-06-04 12:31:09,660 | INFO     | corecount: 8
[2025-06-04 08:31:29] 2025-06-04 12:31:09,660 | INFO     | event service: False
[2025-06-04 08:31:29] 2025-06-04 12:31:09,660 | INFO     | sizes: {0: 2396564, 1: 2397420, 3: 2397626, 11: 2397654, 3264: 2432055, 3267: 2432055, 3272: 2432353}
[2025-06-04 08:31:29] 2025-06-04 12:31:09,660 | INFO     | --------------------------------------------------
[2025-06-04 08:31:29] 2025-06-04 12:31:09,660 | INFO     | 
[2025-06-04 08:31:29] 2025-06-04 12:31:09,660 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 08:31:29] 2025-06-04 12:31:09,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,674 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,674 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,674 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,674 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,674 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,674 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,675 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:31:29] 2025-06-04 12:31:09,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,675 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:31:29] 2025-06-04 12:31:09,675 | INFO     | job 6667883036 has completed (purged errors)
[2025-06-04 08:31:29] 2025-06-04 12:31:09,675 | INFO     | overall cleanup function is called
[2025-06-04 08:31:29] 2025-06-04 12:31:10,682 | INFO     | --- collectZombieJob: --- 10, [23679]
[2025-06-04 08:31:29] 2025-06-04 12:31:10,682 | INFO     | zombie collector waiting for pid 23679
[2025-06-04 08:31:29] 2025-06-04 12:31:10,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:31:29] 2025-06-04 12:31:10,682 | INFO     | collected zombie processes
[2025-06-04 08:31:29] 2025-06-04 12:31:10,682 | INFO     | will attempt to kill all subprocesses of pid=23679
[2025-06-04 08:31:29] 2025-06-04 12:31:10,918 | INFO     | process IDs to be killed: [23679] (in reverse order)
[2025-06-04 08:31:29] 2025-06-04 12:31:10,998 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:31:29] 2025-06-04 12:31:10,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:31:29] 2025-06-04 12:31:11,009 | INFO     | did not find any defunct processes belonging to 23679
[2025-06-04 08:31:29] 2025-06-04 12:31:11,018 | INFO     | did not find any defunct processes belonging to 23679
[2025-06-04 08:31:29] 2025-06-04 12:31:11,018 | INFO     | ready for new job
[2025-06-04 08:31:29] 2025-06-04 12:31:11,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:31:29] 2025-06-04 12:31:11,019 | INFO     | **************************************
[2025-06-04 08:31:29] 2025-06-04 12:31:11,019 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:31:29] 2025-06-04 12:31:11,019 | INFO     | **************************************
[2025-06-04 08:31:29] 2025-06-04 12:31:11,020 | INFO     | 
[2025-06-04 08:31:29] 2025-06-04 12:31:11,034 | INFO     | architecture information:
[2025-06-04 08:31:29] 2025-06-04 12:31:11,034 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:31:29] 2025-06-04 12:31:11,044 | INFO     | cat /etc/os-release:
[2025-06-04 08:31:29] NAME="CentOS Linux"
[2025-06-04 08:31:29] VERSION="7 (Core)"
[2025-06-04 08:31:29] ID="centos"
[2025-06-04 08:31:29] ID_LIKE="rhel fedora"
[2025-06-04 08:31:29] VERSION_ID="7"
[2025-06-04 08:31:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:31:29] ANSI_COLOR="0;31"
[2025-06-04 08:31:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:31:29] HOME_URL="https://www.centos.org/"
[2025-06-04 08:31:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:31:29] 
[2025-06-04 08:31:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:31:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:31:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:31:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:31:29] 
[2025-06-04 08:31:29] 2025-06-04 12:31:11,044 | INFO     | **************************************
[2025-06-04 08:31:29] 2025-06-04 12:31:11,546 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 08:31:29] 2025-06-04 12:31:11,555 | INFO     | sufficient remaining disk space (75456577536 B)
[2025-06-04 08:31:29] 2025-06-04 12:31:11,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:31:29] 2025-06-04 12:31:11,555 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:31:29] 2025-06-04 12:31:11,555 | INFO     | update_server=False
[2025-06-04 08:31:29] 2025-06-04 12:31:11,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:31:29] 2025-06-04 12:31:11,555 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:31:29] 2025-06-04 12:31:11,556 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:31:29] 2025-06-04 12:31:11,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:31:29] 2025-06-04 12:31:11,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:31:29] 2025-06-04 12:31:11,633 | INFO     | all job control threads have been joined
[2025-06-04 08:31:29] 2025-06-04 12:31:11,896 | INFO     | all data control threads have been joined
[2025-06-04 08:31:29] 2025-06-04 12:31:11,911 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:31:29] 2025-06-04 12:31:11,911 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:31:29] 2025-06-04 12:31:11,911 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:31:29] 2025-06-04 12:31:11,911 | INFO     | will abort loop
[2025-06-04 08:31:29] 2025-06-04 12:31:11,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:31:29] 2025-06-04 12:31:12,560 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:12,589 | INFO     | all payload control threads have been joined
[2025-06-04 08:31:29] 2025-06-04 12:31:12,639 | INFO     | [job] control thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:12,901 | INFO     | [data] control thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:12,916 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:13,196 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:13,522 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:13,594 | INFO     | [payload] control thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:13,812 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:13,818 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:13,881 | INFO     | [job] validate thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:13,924 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:13,966 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:13,979 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:14,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:31:29] 2025-06-04 12:31:14,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:31:29] 2025-06-04 12:31:15,203 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:18,157 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:22,039 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:31:29] 2025-06-04 12:31:23,045 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:31:29] 2025-06-04 12:31:24,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139980251551552)>', '<ExcThread(monitor, started 139979627951872)>']
[2025-06-04 08:31:29] 2025-06-04 12:31:25,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:31:29] 2025-06-04 12:31:25,626 | INFO     | [monitor] control thread has ended
[2025-06-04 08:31:29] 2025-06-04 12:31:29,733 | INFO     | all workflow threads have been joined
[2025-06-04 08:31:29] 2025-06-04 12:31:29,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:31:29] 2025-06-04 12:31:29,734 | INFO     | traces error code: 0
[2025-06-04 08:31:29] 2025-06-04 12:31:29,734 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:31:29] 2025-06-04 12:31:29,821 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:31:29] 2025-06-04 12:31:29,823 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:31:29] 2025-06-04 12:31:29,824 [wrapper] pilotpid: 16457
[2025-06-04 08:31:29] 2025-06-04 12:31:29,826 [wrapper] Pilot exit status: 0
[2025-06-04 08:31:29] 2025-06-04 12:31:29,833 [wrapper] pandaids: 6667883036
[2025-06-04 08:31:29] 2025-06-04 12:31:29,892 [wrapper] cleanup supervisor_pilot  169662 16458
[2025-06-04 08:31:29] 2025-06-04 12:31:29,894 [wrapper] Test setup, not cleaning
[2025-06-04 08:31:29] 2025-06-04 12:31:29,895 [wrapper] apfmon messages muted
[2025-06-04 08:31:29] 2025-06-04 12:31:29,897 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:31:29] 2025-06-04 12:31:29,898 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:31:29]  *** Error codes and diagnostics ***
[2025-06-04 08:31:29]     "exeErrorCode": 0,
[2025-06-04 08:31:29]     "exeErrorDiag": "",
[2025-06-04 08:31:29]     "pilotErrorCode": 0,
[2025-06-04 08:31:29]     "pilotErrorDiag": "",
[2025-06-04 08:31:29]  *** Listing of results directory ***
[2025-06-04 08:31:29] total 411956
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas    495897 May 27 20:38 pilot3.tar.gz
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas      5111 May 27 21:06 queuedata.json
[2025-06-04 08:31:29] -rwx------. 1 boincer umatlas     37140 May 27 21:08 runpilot2-wrapper.sh
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:31:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:36 run_atlas
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:36 job.xml
[2025-06-04 08:31:29] -rw-r--r--. 2 boincer umatlas 225296107 Jun  4 07:36 EVNT.44871834._002986.pool.root.1
[2025-06-04 08:31:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:36 start_atlas.sh
[2025-06-04 08:31:29] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:36 shared
[2025-06-04 08:31:29] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 07:36 input.tar.gz
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:36 boinc_lockfile
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 07:36 pandaJob.out
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas    986812 Jun  4 07:36 agis_schedconf.cvmfs.json
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas   1598969 Jun  4 07:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:31:29] drwx------. 4 boincer umatlas      4096 Jun  4 07:36 pilot3
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas        95 Jun  4 08:30 pilot_heartbeat.json
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas      6934 Jun  4 08:30 init_data.xml
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas 191465846 Jun  4 08:30 HITS.44871837._076341.pool.root.1
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:30 boinc_task_state.xml
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas      1022 Jun  4 08:30 memory_monitor_summary.json
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas    286060 Jun  4 08:31 log.44871837._076341.job.log.tgz.1
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas      7673 Jun  4 08:31 heartbeat.json
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:31 boinc_mmap_file
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:31 wrapper_checkpoint.txt
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas      4734 Jun  4 08:31 pilotlog.txt
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas    338212 Jun  4 08:31 log.44871837._076341.job.log.1
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas       357 Jun  4 08:31 output.list
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:31 runtime_log
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas    645120 Jun  4 08:31 result.tar.gz
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 08:31 runtime_log.err
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas       649 Jun  4 08:31 K5FMDmgSKe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUsaKDmFQGggm.diag
[2025-06-04 08:31:29] -rw-r--r--. 1 boincer umatlas     21611 Jun  4 08:31 stderr.txt
[2025-06-04 08:31:29] HITS file was successfully produced:
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas 191465846 Jun  4 08:30 shared/HITS.pool.root.1
[2025-06-04 08:31:29]  *** Contents of shared directory: ***
[2025-06-04 08:31:29] total 408152
[2025-06-04 08:31:29] -rw-r--r--. 2 boincer umatlas 225296107 Jun  4 07:36 ATLAS.root_0
[2025-06-04 08:31:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:36 start_atlas.sh
[2025-06-04 08:31:29] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 07:36 input.tar.gz
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas 191465846 Jun  4 08:30 HITS.pool.root.1
[2025-06-04 08:31:29] -rw-------. 1 boincer umatlas    645120 Jun  4 08:31 result.tar.gz
08:31:31 (12310): run_atlas exited; CPU time 21788.382595
08:31:31 (12310): called boinc_finish(0)

</stderr_txt>
]]>

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