Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:51:40 (13303): wrapper (7.7.26015): starting
00:51:40 (13303): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 00:51:40] Arguments: --nthreads 8
[2025-06-05 00:51:40] Threads: 8
[2025-06-05 00:51:40] Checking for CVMFS
[2025-06-05 00:51:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:51:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:51:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:51:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:51:43] 2.11.2.0 14321 33846 94076 146797 0 16 17557276 25165825 3906 130560 0 17383426 99.828 18026383 1911 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 00:51:43] CVMFS is ok
[2025-06-05 00:51:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:51:43] Checking for apptainer binary...
[2025-06-05 00:51:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:51:43] Running /usr/bin/apptainer --version
[2025-06-05 00:51:43] apptainer version 1.3.2-1.el7
[2025-06-05 00:51:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:29:21] cg-vwn391.simple-grid.lan
[2025-06-05 01:29:21] apptainer works
[2025-06-05 01:29:21] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:29:21] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:29:21] Starting ATLAS job with PandaID=6678313593
[2025-06-05 01:29:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 10:48:22]  *** The last 200 lines of the pilot log: ***
[2025-06-05 10:48:23] 2025-06-05 03:40:48,597 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 10:48:23] 2025-06-05 03:40:48,598 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 10:48:23] 2025-06-05 03:40:48,598 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 10:48:23] 2025-06-05 03:40:48,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 10:48:23] 2025-06-05 03:40:48,603 | INFO     | fitting pss+swap vs Time
[2025-06-05 10:48:23] 2025-06-05 03:40:48,604 | INFO     | sum of square deviations: 4024149870.0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,606 | INFO     | sum of deviations: 54634867587.00001
[2025-06-05 10:48:23] 2025-06-05 03:40:48,606 | INFO     | mean x: 1749087586.0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,606 | INFO     | mean y: 2449040.974468085
[2025-06-05 10:48:23] 2025-06-05 03:40:48,606 | INFO     | -- intersect: -23744471860.650772
[2025-06-05 10:48:23] 2025-06-05 03:40:48,606 | INFO     | intersect: -23744471860.650772
[2025-06-05 10:48:23] 2025-06-05 03:40:48,607 | INFO     | chi2: 6.1078584161163905
[2025-06-05 10:48:23] 2025-06-05 03:40:48,607 | INFO     | sum of square deviations: 3772712597.5
[2025-06-05 10:48:23] 2025-06-05 03:40:48,609 | INFO     | sum of deviations: 68940626260.99995
[2025-06-05 10:48:23] 2025-06-05 03:40:48,609 | INFO     | mean x: 1749087433.5
[2025-06-05 10:48:23] 2025-06-05 03:40:48,609 | INFO     | mean y: 2457555.8173913043
[2025-06-05 10:48:23] 2025-06-05 03:40:48,609 | INFO     | -- intersect: -31959474325.937912
[2025-06-05 10:48:23] 2025-06-05 03:40:48,609 | INFO     | intersect: -31959474325.937912
[2025-06-05 10:48:23] 2025-06-05 03:40:48,610 | INFO     | chi2: 5.392700371094582
[2025-06-05 10:48:23] 2025-06-05 03:40:48,610 | INFO     | current chi2=5.392700371094582 (change=11.708818317313469 %)
[2025-06-05 10:48:23] 2025-06-05 03:40:48,610 | INFO     | right removable region: 229
[2025-06-05 10:48:23] 2025-06-05 03:40:48,610 | INFO     | sum of square deviations: 3772712597.5
[2025-06-05 10:48:23] 2025-06-05 03:40:48,612 | INFO     | sum of deviations: -23517855454.0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,613 | INFO     | mean x: 1749087738.5
[2025-06-05 10:48:23] 2025-06-05 03:40:48,613 | INFO     | mean y: 2496384.6347826086
[2025-06-05 10:48:23] 2025-06-05 03:40:48,613 | INFO     | -- intersect: 10905736837.582312
[2025-06-05 10:48:23] 2025-06-05 03:40:48,613 | INFO     | intersect: 10905736837.582312
[2025-06-05 10:48:23] 2025-06-05 03:40:48,613 | INFO     | chi2: 1.7144359487820182
[2025-06-05 10:48:23] 2025-06-05 03:40:48,613 | INFO     | current chi2=1.7144359487820182 (change=71.93065339795282 %)
[2025-06-05 10:48:23] 2025-06-05 03:40:48,614 | INFO     | sum of square deviations: 3531973200.0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,616 | INFO     | sum of deviations: -49985154604.0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,616 | INFO     | mean x: 1749087891.0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,616 | INFO     | mean y: 2513004.6
[2025-06-05 10:48:23] 2025-06-05 03:40:48,616 | INFO     | -- intersect: 24755936571.805805
[2025-06-05 10:48:23] 2025-06-05 03:40:48,616 | INFO     | intersect: 24755936571.805805
[2025-06-05 10:48:23] 2025-06-05 03:40:48,616 | INFO     | chi2: 0.9590200909370225
[2025-06-05 10:48:23] 2025-06-05 03:40:48,616 | INFO     | current chi2=0.9590200909370225 (change=44.06206358316644 %)
[2025-06-05 10:48:23] 2025-06-05 03:40:48,617 | INFO     | sum of square deviations: 3301699115.0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,619 | INFO     | sum of deviations: -45327641795.0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,619 | INFO     | mean x: 1749088043.5
[2025-06-05 10:48:23] 2025-06-05 03:40:48,619 | INFO     | mean y: 2509894.0454545454
[2025-06-05 10:48:23] 2025-06-05 03:40:48,619 | INFO     | -- intersect: 24015005746.10476
[2025-06-05 10:48:23] 2025-06-05 03:40:48,619 | INFO     | intersect: 24015005746.10476
[2025-06-05 10:48:23] 2025-06-05 03:40:48,620 | INFO     | chi2: 0.94645712503666
[2025-06-05 10:48:23] 2025-06-05 03:40:48,620 | INFO     | current chi2=0.94645712503666 (change=1.309979427864502 %)
[2025-06-05 10:48:23] 2025-06-05 03:40:48,620 | INFO     | left removable region: 30
[2025-06-05 10:48:23] 2025-06-05 03:40:48,620 | INFO     | sum of square deviations: 2443580700.0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,621 | INFO     | sum of deviations: -6900548506.0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,622 | INFO     | mean x: 1749088318.0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,622 | INFO     | mean y: 2502922.1557788947
[2025-06-05 10:48:23] 2025-06-05 03:40:48,622 | INFO     | -- intersect: 4941840010.403755
[2025-06-05 10:48:23] 2025-06-05 03:40:48,622 | INFO     | intersect: 4941840010.403755
[2025-06-05 10:48:23] 2025-06-05 03:40:48,622 | INFO     | chi2: 0.06979610175489874
[2025-06-05 10:48:23] 2025-06-05 03:40:48,623 | INFO     | -- intersect: 4941840010.403755
[2025-06-05 10:48:23] 2025-06-05 03:40:48,623 | INFO     | current memory leak: -2.82 B/s (using 199 data points, chi2=0.07)
[2025-06-05 10:48:23] 2025-06-05 03:40:48,624 | INFO     | ..............................
[2025-06-05 10:48:23] 2025-06-05 03:40:48,624 | INFO     | . Timing measurements:
[2025-06-05 10:48:23] 2025-06-05 03:40:48,624 | INFO     | . get job = 0 s
[2025-06-05 10:48:23] 2025-06-05 03:40:48,624 | INFO     | . initial setup = 9 s
[2025-06-05 10:48:23] 2025-06-05 03:40:48,624 | INFO     | . payload setup = 165 s
[2025-06-05 10:48:23] 2025-06-05 03:40:48,624 | INFO     | . stage-in = 0 s
[2025-06-05 10:48:23] 2025-06-05 03:40:48,624 | INFO     | . payload execution = 14452 s
[2025-06-05 10:48:23] 2025-06-05 03:40:48,624 | INFO     | . stage-out = 3 s
[2025-06-05 10:48:23] 2025-06-05 03:40:48,624 | INFO     | . log creation = 1 s
[2025-06-05 10:48:23] 2025-06-05 03:40:48,624 | INFO     | ..............................
[2025-06-05 10:48:23] 2025-06-05 03:40:48,779 | INFO     | 
[2025-06-05 10:48:23] 2025-06-05 03:40:48,779 | INFO     | job summary report
[2025-06-05 10:48:23] 2025-06-05 03:40:48,779 | INFO     | --------------------------------------------------
[2025-06-05 10:48:23] 2025-06-05 03:40:48,779 | INFO     | PanDA job id: 6678313593
[2025-06-05 10:48:23] 2025-06-05 03:40:48,779 | INFO     | task id: 45006595
[2025-06-05 10:48:23] 2025-06-05 03:40:48,779 | INFO     | errors: (none)
[2025-06-05 10:48:23] 2025-06-05 03:40:48,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 10:48:23] 2025-06-05 03:40:48,780 | INFO     | pilot state: finished 
[2025-06-05 10:48:23] 2025-06-05 03:40:48,780 | INFO     | transexitcode: 0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,780 | INFO     | exeerrorcode: 0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,780 | INFO     | exeerrordiag: 
[2025-06-05 10:48:23] 2025-06-05 03:40:48,780 | INFO     | exitcode: 0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,780 | INFO     | exitmsg: OK
[2025-06-05 10:48:23] 2025-06-05 03:40:48,780 | INFO     | cpuconsumptiontime: 50304 s
[2025-06-05 10:48:23] 2025-06-05 03:40:48,780 | INFO     | nevents: 400
[2025-06-05 10:48:23] 2025-06-05 03:40:48,780 | INFO     | neventsw: 0
[2025-06-05 10:48:23] 2025-06-05 03:40:48,780 | INFO     | pid: 13919
[2025-06-05 10:48:23] 2025-06-05 03:40:48,781 | INFO     | pgrp: 13919
[2025-06-05 10:48:23] 2025-06-05 03:40:48,781 | INFO     | corecount: 8
[2025-06-05 10:48:23] 2025-06-05 03:40:48,781 | INFO     | event service: False
[2025-06-05 10:48:23] 2025-06-05 03:40:48,781 | INFO     | sizes: {0: 2396514, 1: 2397200, 2: 2397399, 13: 2397399, 24: 2397455, 34: 2397483, 45: 2397639, 56: 2397667, 66: 2397695, 77: 2397723, 81: 2397985, 88: 2398293, 14
[2025-06-05 10:48:23] 2025-06-05 03:40:48,781 | INFO     | --------------------------------------------------
[2025-06-05 10:48:23] 2025-06-05 03:40:48,781 | INFO     | 
[2025-06-05 10:48:23] 2025-06-05 03:40:48,781 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-06-05 10:48:23] 2025-06-05 03:40:49,060 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,060 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,060 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,060 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,061 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,061 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,061 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,061 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,061 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,061 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,061 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,061 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,062 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,062 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 10:48:23] 2025-06-05 03:40:49,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,062 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 10:48:23] 2025-06-05 03:40:49,062 | INFO     | job 6678313593 has completed (purged errors)
[2025-06-05 10:48:23] 2025-06-05 03:40:49,062 | INFO     | overall cleanup function is called
[2025-06-05 10:48:23] 2025-06-05 03:40:50,072 | INFO     | --- collectZombieJob: --- 10, [13919]
[2025-06-05 10:48:23] 2025-06-05 03:40:50,072 | INFO     | zombie collector waiting for pid 13919
[2025-06-05 10:48:23] 2025-06-05 03:40:50,072 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 10:48:23] 2025-06-05 03:40:50,072 | INFO     | collected zombie processes
[2025-06-05 10:48:23] 2025-06-05 03:40:50,073 | INFO     | will attempt to kill all subprocesses of pid=13919
[2025-06-05 10:48:23] 2025-06-05 03:40:50,182 | INFO     | process IDs to be killed: [13919] (in reverse order)
[2025-06-05 10:48:23] 2025-06-05 03:40:50,552 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 10:48:23] 2025-06-05 03:40:50,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 10:48:23] 2025-06-05 03:40:50,556 | INFO     | did not find any defunct processes belonging to 13919
[2025-06-05 10:48:23] 2025-06-05 03:40:50,559 | INFO     | did not find any defunct processes belonging to 13919
[2025-06-05 10:48:23] 2025-06-05 03:40:50,560 | INFO     | ready for new job
[2025-06-05 10:48:23] 2025-06-05 03:40:50,560 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 10:48:23] 2025-06-05 03:40:50,562 | INFO     | **************************************
[2025-06-05 10:48:23] 2025-06-05 03:40:50,562 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 10:48:23] 2025-06-05 03:40:50,562 | INFO     | **************************************
[2025-06-05 10:48:23] 2025-06-05 03:40:50,562 | INFO     | 
[2025-06-05 10:48:23] 2025-06-05 03:40:50,563 | INFO     | pilot is running in a VM
[2025-06-05 10:48:23] 2025-06-05 03:40:50,563 | INFO     | architecture information:
[2025-06-05 10:48:23] 2025-06-05 03:40:50,572 | INFO     | executing command: cat /etc/os-release
[2025-06-05 10:48:23] 2025-06-05 03:40:50,764 | INFO     | cat /etc/os-release:
[2025-06-05 10:48:23] NAME="CentOS Linux"
[2025-06-05 10:48:23] VERSION="7 (Core)"
[2025-06-05 10:48:23] ID="centos"
[2025-06-05 10:48:23] ID_LIKE="rhel fedora"
[2025-06-05 10:48:23] VERSION_ID="7"
[2025-06-05 10:48:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 10:48:23] ANSI_COLOR="0;31"
[2025-06-05 10:48:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 10:48:23] HOME_URL="https://www.centos.org/"
[2025-06-05 10:48:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 10:48:23] 
[2025-06-05 10:48:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 10:48:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 10:48:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 10:48:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 10:48:23] 
[2025-06-05 10:48:23] 2025-06-05 03:40:50,765 | INFO     | **************************************
[2025-06-05 10:48:23] 2025-06-05 03:40:51,273 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-06-05 10:48:23] 2025-06-05 03:40:51,390 | INFO     | sufficient remaining disk space (496864591872 B)
[2025-06-05 10:48:23] 2025-06-05 03:40:51,391 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 10:48:23] 2025-06-05 03:40:51,391 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 10:48:23] 2025-06-05 03:40:51,391 | INFO     | update_server=False
[2025-06-05 10:48:23] 2025-06-05 03:40:51,391 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 10:48:23] 2025-06-05 03:40:51,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 10:48:23] 2025-06-05 03:40:51,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:48:23] 2025-06-05 03:40:51,394 | INFO     | aborting loop
[2025-06-05 10:48:23] 2025-06-05 03:40:51,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 10:48:23] 2025-06-05 03:40:51,651 | INFO     | PID=7305 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-05 10:48:23] 2025-06-05 03:40:51,651 | INFO     | .. there are 9 such processes running
[2025-06-05 10:48:23] 2025-06-05 03:40:51,652 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 10:48:23] 2025-06-05 03:40:51,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 10:48:23] 2025-06-05 03:40:51,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 10:48:23] 2025-06-05 03:40:51,984 | INFO     | all data control threads have been joined
[2025-06-05 10:48:23] 2025-06-05 03:40:52,066 | INFO     | all job control threads have been joined
[2025-06-05 10:48:23] 2025-06-05 03:40:52,396 | INFO     | [job] retrieve thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:52,400 | INFO     | [job] job monitor thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:52,517 | INFO     | all payload control threads have been joined
[2025-06-05 10:48:23] 2025-06-05 03:40:52,698 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:52,700 | INFO     | [job] validate thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:52,818 | INFO     | [data] copytool_in thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:52,991 | INFO     | [data] control thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:53,072 | INFO     | [job] control thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:53,196 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:53,196 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:53,278 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:53,399 | INFO     | [data] copytool_out thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:53,475 | INFO     | [payload] failed_post thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:53,523 | INFO     | [payload] control thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:53,634 | INFO     | [payload] validate_post thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:53,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:48:23] 2025-06-05 03:40:54,800 | INFO     | [job] queue monitor thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:55,618 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 10:48:23] 2025-06-05 03:40:56,744 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140468390446912)>', '<ExcThread(monitor, started 140467643610880)>']
[2025-06-05 10:48:23] 2025-06-05 03:40:57,689 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 10:48:23] 2025-06-05 03:40:57,689 | INFO     | [monitor] control thread has ended
[2025-06-05 10:48:23] 2025-06-05 03:41:01,770 | INFO     | all workflow threads have been joined
[2025-06-05 10:48:23] 2025-06-05 03:41:01,770 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 10:48:23] 2025-06-05 03:41:01,770 | INFO     | traces error code: 0
[2025-06-05 10:48:23] 2025-06-05 03:41:01,771 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 10:48:23] 2025-06-05 03:41:02,138 [wrapper] ==== pilot stdout END ====
[2025-06-05 10:48:23] 2025-06-05 03:41:02,228 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 10:48:23] 2025-06-05 03:41:02,306 [wrapper] pilotpid: 7305
[2025-06-05 10:48:23] 2025-06-05 03:41:02,357 [wrapper] Pilot exit status: 0
[2025-06-05 10:48:23] 2025-06-05 03:41:02,901 [wrapper] pandaids: 6678313593
[2025-06-05 10:48:23] 2025-06-05 03:41:03,577 [wrapper] cleanup supervisor_pilot 25940 7306
[2025-06-05 10:48:23] 2025-06-05 03:41:03,619 [wrapper] Test setup, not cleaning
[2025-06-05 10:48:23] 2025-06-05 03:41:03,708 [wrapper] apfmon messages muted
[2025-06-05 10:48:23] 2025-06-05 03:41:03,761 [wrapper] ==== wrapper stdout END ====
[2025-06-05 10:48:23] 2025-06-05 03:41:03,808 [wrapper] ==== wrapper stderr END ====
[2025-06-05 10:48:23]  *** Error codes and diagnostics ***
[2025-06-05 10:48:23]     "exeErrorCode": 0,
[2025-06-05 10:48:23]     "exeErrorDiag": "",
[2025-06-05 10:48:23]     "pilotErrorCode": 0,
[2025-06-05 10:48:23]     "pilotErrorDiag": "",
[2025-06-05 10:48:23]  *** Listing of results directory ***
[2025-06-05 10:48:23] total 390796
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc      5111 Jun  4 06:29 queuedata.json
[2025-06-05 10:48:23] -rwx------. 1 boinc boinc     37140 Jun  4 06:29 runpilot2-wrapper.sh
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc       100 Jun  5 00:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 10:48:23] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 00:51 run_atlas
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc       105 Jun  5 00:51 job.xml
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc      6393 Jun  5 00:51 init_data.xml
[2025-06-05 10:48:23] -rw-r--r--. 2 boinc boinc 215879275 Jun  5 00:51 EVNT.45006593._002105.pool.root.1
[2025-06-05 10:48:23] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:51 start_atlas.sh
[2025-06-05 10:48:23] drwxrwx--x. 2 boinc boinc        68 Jun  5 00:51 shared
[2025-06-05 10:48:23] -rw-r--r--. 2 boinc boinc    508875 Jun  5 00:51 input.tar.gz
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc         0 Jun  5 00:51 boinc_lockfile
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc      2525 Jun  5 01:29 pandaJob.out
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc    987117 Jun  5 01:32 agis_schedconf.cvmfs.json
[2025-06-05 10:48:23] drwx------. 4 boinc boinc      4096 Jun  5 01:32 pilot3
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc 177125641 Jun  5 05:37 HITS.45006595._052573.pool.root.1
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc       531 Jun  5 05:38 boinc_task_state.xml
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc      1020 Jun  5 05:39 memory_monitor_summary.json
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc   1598969 Jun  5 05:39 agis_ddmendpoints.agis.ALL.json
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc    400527 Jun  5 05:39 log.45006595._052573.job.log.tgz.1
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc        95 Jun  5 05:40 pilot_heartbeat.json
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc      7696 Jun  5 05:40 heartbeat.json
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc      4808 Jun  5 05:41 pilotlog.txt
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc   1277346 Jun  5 05:41 log.45006595._052573.job.log.1
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc       357 Jun  5 05:41 output.list
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc       620 Jun  5 05:41 runtime_log
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc   1699840 Jun  5 05:41 result.tar.gz
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc       657 Jun  5 05:41 Y9FKDm2vug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVFnKDmiUQulm.diag
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc      8673 Jun  5 05:41 runtime_log.err
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc      8192 Jun  5 10:48 boinc_mmap_file
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc        28 Jun  5 10:48 wrapper_checkpoint.txt
[2025-06-05 10:48:23] -rw-r--r--. 1 boinc boinc     20571 Jun  5 10:48 stderr.txt
[2025-06-05 10:48:23] HITS file was successfully produced:
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc 177125641 Jun  5 05:37 shared/HITS.pool.root.1
[2025-06-05 10:48:23]  *** Contents of shared directory: ***
[2025-06-05 10:48:23] total 385972
[2025-06-05 10:48:23] -rw-r--r--. 2 boinc boinc 215879275 Jun  5 00:51 ATLAS.root_0
[2025-06-05 10:48:23] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:51 start_atlas.sh
[2025-06-05 10:48:23] -rw-r--r--. 2 boinc boinc    508875 Jun  5 00:51 input.tar.gz
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc 177125641 Jun  5 05:37 HITS.pool.root.1
[2025-06-05 10:48:23] -rw-------. 1 boinc boinc   1699840 Jun  5 05:41 result.tar.gz
10:48:24 (13303): run_atlas exited; CPU time 50506.778273
10:48:24 (13303): called boinc_finish(0)

</stderr_txt>
]]>

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