Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:46:17 (39450): wrapper (7.7.26015): starting
07:46:17 (39450): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:46:17] Arguments: --nthreads 8
[2025-06-04 07:46:17] Threads: 8
[2025-06-04 07:46:17] Checking for CVMFS
[2025-06-04 07:46:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:46:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:46:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:46:18] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/patatrack.cern.ch: Transport endpoint is not connected
[2025-06-04 07:46:18] 
[2025-06-04 07:46:18] CVMFS is ok
[2025-06-04 07:46:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:46:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:46:18] Further information can be found at the LHC@home message board.
[2025-06-04 07:46:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:46:18] Checking for apptainer binary...
[2025-06-04 07:46:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:46:18] Running /usr/bin/apptainer --version
[2025-06-04 07:46:18] apptainer version 1.3.2-1.el7
[2025-06-04 07:46:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:46:19] c-211-13.aglt2.org
[2025-06-04 07:46:19] apptainer works
[2025-06-04 07:46:19] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:46:19] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:46:19] Starting ATLAS job with PandaID=6678390211
[2025-06-04 07:46:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:08:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:08:03] 2025-06-04 14:07:47,840 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:08:03] 2025-06-04 14:07:47,840 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:08:03] 2025-06-04 14:07:47,843 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:08:03] 2025-06-04 14:07:47,843 | INFO     | sum of square deviations: 814878534.5
[2025-06-04 10:08:03] 2025-06-04 14:07:47,844 | INFO     | sum of deviations: 15982870226.000004
[2025-06-04 10:08:03] 2025-06-04 14:07:47,844 | INFO     | mean x: 1749041825.5
[2025-06-04 10:08:03] 2025-06-04 14:07:47,844 | INFO     | mean y: 2461606.927536232
[2025-06-04 10:08:03] 2025-06-04 14:07:47,844 | INFO     | -- intersect: -34302907025.669136
[2025-06-04 10:08:03] 2025-06-04 14:07:47,845 | INFO     | intersect: -34302907025.669136
[2025-06-04 10:08:03] 2025-06-04 14:07:47,845 | INFO     | chi2: 1.5675906068465169
[2025-06-04 10:08:03] 2025-06-04 14:07:47,845 | INFO     | sum of square deviations: 729472282.0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,846 | INFO     | sum of deviations: 15264951953.999998
[2025-06-04 10:08:03] 2025-06-04 14:07:47,846 | INFO     | mean x: 1749041673.0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,846 | INFO     | mean y: 2460328.3759398498
[2025-06-04 10:08:03] 2025-06-04 14:07:47,846 | INFO     | -- intersect: -36598021640.161385
[2025-06-04 10:08:03] 2025-06-04 14:07:47,847 | INFO     | intersect: -36598021640.161385
[2025-06-04 10:08:03] 2025-06-04 14:07:47,847 | INFO     | chi2: 1.5697455015495894
[2025-06-04 10:08:03] 2025-06-04 14:07:47,847 | INFO     | current chi2=1.5697455015495894 (change=-0.13746540031950408 %)
[2025-06-04 10:08:03] 2025-06-04 14:07:47,847 | INFO     | right removable region: 132
[2025-06-04 10:08:03] 2025-06-04 14:07:47,847 | INFO     | sum of square deviations: 729472282.0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,848 | INFO     | sum of deviations: -6315600352.000001
[2025-06-04 10:08:03] 2025-06-04 14:07:47,848 | INFO     | mean x: 1749041978.0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,848 | INFO     | mean y: 2500865.203007519
[2025-06-04 10:08:03] 2025-06-04 14:07:47,848 | INFO     | -- intersect: 15145297109.131542
[2025-06-04 10:08:03] 2025-06-04 14:07:47,849 | INFO     | intersect: 15145297109.131542
[2025-06-04 10:08:03] 2025-06-04 14:07:47,849 | INFO     | chi2: 0.042656260845061064
[2025-06-04 10:08:03] 2025-06-04 14:07:47,849 | INFO     | current chi2=0.042656260845061064 (change=97.27886473300119 %)
[2025-06-04 10:08:03] 2025-06-04 14:07:47,849 | INFO     | sum of square deviations: 650252192.0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,850 | INFO     | sum of deviations: -6619282691.0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,850 | INFO     | mean x: 1749042130.5
[2025-06-04 10:08:03] 2025-06-04 14:07:47,850 | INFO     | mean y: 2501371.0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,850 | INFO     | -- intersect: 17806984681.758934
[2025-06-04 10:08:03] 2025-06-04 14:07:47,854 | INFO     | intersect: 17806984681.758934
[2025-06-04 10:08:03] 2025-06-04 14:07:47,855 | INFO     | chi2: 0.029924221622417552
[2025-06-04 10:08:03] 2025-06-04 14:07:47,855 | INFO     | current chi2=0.029924221622417552 (change=29.84799644978185 %)
[2025-06-04 10:08:03] 2025-06-04 14:07:47,855 | INFO     | sum of square deviations: 576985702.0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,856 | INFO     | sum of deviations: -4965705487.999998
[2025-06-04 10:08:03] 2025-06-04 14:07:47,856 | INFO     | mean x: 1749042283.0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,857 | INFO     | mean y: 2497922.7560975607
[2025-06-04 10:08:03] 2025-06-04 14:07:47,858 | INFO     | -- intersect: 15055260639.980494
[2025-06-04 10:08:03] 2025-06-04 14:07:47,859 | INFO     | intersect: 15055260639.980494
[2025-06-04 10:08:03] 2025-06-04 14:07:47,859 | INFO     | chi2: 0.027980703446984723
[2025-06-04 10:08:03] 2025-06-04 14:07:47,861 | INFO     | current chi2=0.027980703446984723 (change=6.4947994302276335 %)
[2025-06-04 10:08:03] 2025-06-04 14:07:47,861 | INFO     | left removable region: 30
[2025-06-04 10:08:03] 2025-06-04 14:07:47,861 | INFO     | sum of square deviations: 329031285.5
[2025-06-04 10:08:03] 2025-06-04 14:07:47,862 | INFO     | sum of deviations: 791181803.4999999
[2025-06-04 10:08:03] 2025-06-04 14:07:47,862 | INFO     | mean x: 1749042557.5
[2025-06-04 10:08:03] 2025-06-04 14:07:47,863 | INFO     | mean y: 2482373.5588235296
[2025-06-04 10:08:03] 2025-06-04 14:07:47,863 | INFO     | -- intersect: -4203229077.0658383
[2025-06-04 10:08:03] 2025-06-04 14:07:47,863 | INFO     | intersect: -4203229077.0658383
[2025-06-04 10:08:03] 2025-06-04 14:07:47,864 | INFO     | chi2: 0.0034833266663163534
[2025-06-04 10:08:03] 2025-06-04 14:07:47,865 | INFO     | -- intersect: -4203229077.0658383
[2025-06-04 10:08:03] 2025-06-04 14:07:47,865 | INFO     | current memory leak: 2.40 B/s (using 102 data points, chi2=0.00)
[2025-06-04 10:08:03] 2025-06-04 14:07:47,865 | INFO     | ..............................
[2025-06-04 10:08:03] 2025-06-04 14:07:47,865 | INFO     | . Timing measurements:
[2025-06-04 10:08:03] 2025-06-04 14:07:47,866 | INFO     | . get job = 0 s
[2025-06-04 10:08:03] 2025-06-04 14:07:47,866 | INFO     | . initial setup = 2 s
[2025-06-04 10:08:03] 2025-06-04 14:07:47,866 | INFO     | . payload setup = 14 s
[2025-06-04 10:08:03] 2025-06-04 14:07:47,866 | INFO     | . stage-in = 0 s
[2025-06-04 10:08:03] 2025-06-04 14:07:47,866 | INFO     | . payload execution = 8412 s
[2025-06-04 10:08:03] 2025-06-04 14:07:47,866 | INFO     | . stage-out = 1 s
[2025-06-04 10:08:03] 2025-06-04 14:07:47,866 | INFO     | . log creation = 0 s
[2025-06-04 10:08:03] 2025-06-04 14:07:47,866 | INFO     | ..............................
[2025-06-04 10:08:03] 2025-06-04 14:07:47,986 | INFO     | 
[2025-06-04 10:08:03] 2025-06-04 14:07:47,986 | INFO     | job summary report
[2025-06-04 10:08:03] 2025-06-04 14:07:47,986 | INFO     | --------------------------------------------------
[2025-06-04 10:08:03] 2025-06-04 14:07:47,986 | INFO     | PanDA job id: 6678390211
[2025-06-04 10:08:03] 2025-06-04 14:07:47,986 | INFO     | task id: 45006595
[2025-06-04 10:08:03] 2025-06-04 14:07:47,986 | INFO     | errors: (none)
[2025-06-04 10:08:03] 2025-06-04 14:07:47,987 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:08:03] 2025-06-04 14:07:47,987 | INFO     | pilot state: finished 
[2025-06-04 10:08:03] 2025-06-04 14:07:47,987 | INFO     | transexitcode: 0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,987 | INFO     | exeerrorcode: 0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,987 | INFO     | exeerrordiag: 
[2025-06-04 10:08:03] 2025-06-04 14:07:47,987 | INFO     | exitcode: 0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,987 | INFO     | exitmsg: OK
[2025-06-04 10:08:03] 2025-06-04 14:07:47,987 | INFO     | cpuconsumptiontime: 48012 s
[2025-06-04 10:08:03] 2025-06-04 14:07:47,988 | INFO     | nevents: 400
[2025-06-04 10:08:03] 2025-06-04 14:07:47,988 | INFO     | neventsw: 0
[2025-06-04 10:08:03] 2025-06-04 14:07:47,988 | INFO     | pid: 5950
[2025-06-04 10:08:03] 2025-06-04 14:07:47,988 | INFO     | pgrp: 5950
[2025-06-04 10:08:03] 2025-06-04 14:07:47,988 | INFO     | corecount: 8
[2025-06-04 10:08:03] 2025-06-04 14:07:47,988 | INFO     | event service: False
[2025-06-04 10:08:03] 2025-06-04 14:07:47,991 | INFO     | sizes: {0: 2396514, 1: 2397370, 10: 2397576, 12: 2397604, 8430: 2425341, 8431: 2425340, 8432: 2434521, 8448: 2434635}
[2025-06-04 10:08:03] 2025-06-04 14:07:47,991 | INFO     | --------------------------------------------------
[2025-06-04 10:08:03] 2025-06-04 14:07:47,991 | INFO     | 
[2025-06-04 10:08:03] 2025-06-04 14:07:47,991 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 10:08:03] 2025-06-04 14:07:48,030 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,031 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,032 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,032 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,032 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:08:03] 2025-06-04 14:07:48,032 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,032 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:08:03] 2025-06-04 14:07:48,032 | INFO     | job 6678390211 has completed (purged errors)
[2025-06-04 10:08:03] 2025-06-04 14:07:48,032 | INFO     | overall cleanup function is called
[2025-06-04 10:08:03] 2025-06-04 14:07:48,280 | INFO     | PID=43453 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 10:08:03] 2025-06-04 14:07:48,280 | INFO     | .. there are 30 such processes running
[2025-06-04 10:08:03] 2025-06-04 14:07:49,040 | INFO     | --- collectZombieJob: --- 10, [5950]
[2025-06-04 10:08:03] 2025-06-04 14:07:49,040 | INFO     | zombie collector waiting for pid 5950
[2025-06-04 10:08:03] 2025-06-04 14:07:49,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:08:03] 2025-06-04 14:07:49,040 | INFO     | collected zombie processes
[2025-06-04 10:08:03] 2025-06-04 14:07:49,040 | INFO     | will attempt to kill all subprocesses of pid=5950
[2025-06-04 10:08:03] 2025-06-04 14:07:49,285 | INFO     | 8470s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 10:08:03] 2025-06-04 14:07:49,454 | INFO     | process IDs to be killed: [5950] (in reverse order)
[2025-06-04 10:08:03] 2025-06-04 14:07:49,586 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:08:03] 2025-06-04 14:07:49,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:08:03] 2025-06-04 14:07:49,596 | INFO     | did not find any defunct processes belonging to 5950
[2025-06-04 10:08:03] 2025-06-04 14:07:49,606 | INFO     | did not find any defunct processes belonging to 5950
[2025-06-04 10:08:03] 2025-06-04 14:07:49,606 | INFO     | ready for new job
[2025-06-04 10:08:03] 2025-06-04 14:07:49,606 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:08:03] 2025-06-04 14:07:49,608 | INFO     | **************************************
[2025-06-04 10:08:03] 2025-06-04 14:07:49,608 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:08:03] 2025-06-04 14:07:49,608 | INFO     | **************************************
[2025-06-04 10:08:03] 2025-06-04 14:07:49,608 | INFO     | 
[2025-06-04 10:08:03] 2025-06-04 14:07:49,611 | INFO     | architecture information:
[2025-06-04 10:08:03] 2025-06-04 14:07:49,615 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:08:03] 2025-06-04 14:07:49,700 | INFO     | cat /etc/os-release:
[2025-06-04 10:08:03] NAME="CentOS Linux"
[2025-06-04 10:08:03] VERSION="7 (Core)"
[2025-06-04 10:08:03] ID="centos"
[2025-06-04 10:08:03] ID_LIKE="rhel fedora"
[2025-06-04 10:08:03] VERSION_ID="7"
[2025-06-04 10:08:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:08:03] ANSI_COLOR="0;31"
[2025-06-04 10:08:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:08:03] HOME_URL="https://www.centos.org/"
[2025-06-04 10:08:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:08:03] 
[2025-06-04 10:08:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:08:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:08:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:08:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:08:03] 
[2025-06-04 10:08:03] 2025-06-04 14:07:49,700 | INFO     | **************************************
[2025-06-04 10:08:03] 2025-06-04 14:07:50,203 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 10:08:03] 2025-06-04 14:07:50,234 | INFO     | sufficient remaining disk space (56668192768 B)
[2025-06-04 10:08:03] 2025-06-04 14:07:50,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:08:03] 2025-06-04 14:07:50,234 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:08:03] 2025-06-04 14:07:50,234 | INFO     | update_server=False
[2025-06-04 10:08:03] 2025-06-04 14:07:50,234 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:08:03] 2025-06-04 14:07:50,291 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:08:03] 2025-06-04 14:07:50,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:08:03] 2025-06-04 14:07:50,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:08:03] 2025-06-04 14:07:50,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:08:03] 2025-06-04 14:07:50,461 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:08:03] 2025-06-04 14:07:50,461 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:08:03] 2025-06-04 14:07:50,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:08:03] 2025-06-04 14:07:50,487 | INFO     | will abort loop
[2025-06-04 10:08:03] 2025-06-04 14:07:51,040 | INFO     | all job control threads have been joined
[2025-06-04 10:08:03] 2025-06-04 14:07:51,151 | INFO     | all data control threads have been joined
[2025-06-04 10:08:03] 2025-06-04 14:07:51,244 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:51,500 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:51,630 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:51,654 | INFO     | all payload control threads have been joined
[2025-06-04 10:08:03] 2025-06-04 14:07:51,734 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:51,931 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:08:03] 2025-06-04 14:07:52,045 | INFO     | [job] control thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:52,110 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:52,156 | INFO     | [data] control thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:52,334 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:52,346 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:52,388 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:52,659 | INFO     | [payload] control thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:52,685 | INFO     | [job] validate thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:52,731 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:52,735 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:52,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:08:03] 2025-06-04 14:07:54,005 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:55,938 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:08:03] 2025-06-04 14:07:56,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139709575624512)>', '<ExcThread(monitor, started 139708768184064)>']
[2025-06-04 10:08:03] 2025-06-04 14:07:57,327 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:08:03] 2025-06-04 14:07:57,327 | INFO     | [monitor] control thread has ended
[2025-06-04 10:08:03] 2025-06-04 14:08:01,943 | INFO     | all workflow threads have been joined
[2025-06-04 10:08:03] 2025-06-04 14:08:01,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:08:03] 2025-06-04 14:08:01,943 | INFO     | traces error code: 0
[2025-06-04 10:08:03] 2025-06-04 14:08:01,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:08:03] 2025-06-04 14:08:02,121 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:08:03] 2025-06-04 14:08:02,123 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:08:03] 2025-06-04 14:08:02,126 [wrapper] pilotpid: 43453
[2025-06-04 10:08:03] 2025-06-04 14:08:02,138 [wrapper] Pilot exit status: 0
[2025-06-04 10:08:03] 2025-06-04 14:08:02,290 [wrapper] pandaids: 6678390211
[2025-06-04 10:08:03] 2025-06-04 14:08:02,441 [wrapper] cleanup supervisor_pilot 28677 43454
[2025-06-04 10:08:03] 2025-06-04 14:08:02,449 [wrapper] Test setup, not cleaning
[2025-06-04 10:08:03] 2025-06-04 14:08:02,496 [wrapper] apfmon messages muted
[2025-06-04 10:08:03] 2025-06-04 14:08:02,539 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:08:03] 2025-06-04 14:08:02,579 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:08:03]  *** Error codes and diagnostics ***
[2025-06-04 10:08:03]     "exeErrorCode": 0,
[2025-06-04 10:08:03]     "exeErrorDiag": "",
[2025-06-04 10:08:03]     "pilotErrorCode": 0,
[2025-06-04 10:08:03]     "pilotErrorDiag": "",
[2025-06-04 10:08:03]  *** Listing of results directory ***
[2025-06-04 10:08:03] total 393548
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:50 queuedata.json
[2025-06-04 10:08:03] -rwx------ 1 boincer umatlas     37140 Jun  4 02:51 runpilot2-wrapper.sh
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:08:03] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:46 run_atlas
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:46 job.xml
[2025-06-04 10:08:03] -rw-r--r-- 2 boincer umatlas 215931932 Jun  4 07:46 EVNT.45006593._002187.pool.root.1
[2025-06-04 10:08:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:46 start_atlas.sh
[2025-06-04 10:08:03] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:46 shared
[2025-06-04 10:08:03] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 07:46 input.tar.gz
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:46 boinc_lockfile
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 07:46 pandaJob.out
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas    986812 Jun  4 07:46 agis_schedconf.cvmfs.json
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas   1598969 Jun  4 07:46 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:08:03] drwx------ 4 boincer umatlas      4096 Jun  4 07:46 pilot3
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas      6047 Jun  4 10:02 init_data.xml
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas 180995060 Jun  4 10:06 HITS.45006595._054662.pool.root.1
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:06 boinc_task_state.xml
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas        95 Jun  4 10:07 pilot_heartbeat.json
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas      1059 Jun  4 10:07 memory_monitor_summary.json
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas    345466 Jun  4 10:07 log.45006595._054662.job.log.tgz.1
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas      7748 Jun  4 10:07 heartbeat.json
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:07 boinc_mmap_file
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:07 wrapper_checkpoint.txt
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas      4539 Jun  4 10:08 pilotlog.txt
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas    772373 Jun  4 10:08 log.45006595._054662.job.log.1
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas       357 Jun  4 10:08 output.list
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:08 runtime_log
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas   1136640 Jun  4 10:08 result.tar.gz
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 10:08 runtime_log.err
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas       658 Jun  4 10:08 27uKDm98wg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuanKDmb6ctQo.diag
[2025-06-04 10:08:03] -rw-r--r-- 1 boincer umatlas     20665 Jun  4 10:08 stderr.txt
[2025-06-04 10:08:03] HITS file was successfully produced:
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas 180995060 Jun  4 10:06 shared/HITS.pool.root.1
[2025-06-04 10:08:03]  *** Contents of shared directory: ***
[2025-06-04 10:08:03] total 389260
[2025-06-04 10:08:03] -rw-r--r-- 2 boincer umatlas 215931932 Jun  4 07:46 ATLAS.root_0
[2025-06-04 10:08:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:46 start_atlas.sh
[2025-06-04 10:08:03] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 07:46 input.tar.gz
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas 180995060 Jun  4 10:06 HITS.pool.root.1
[2025-06-04 10:08:03] -rw------- 1 boincer umatlas   1136640 Jun  4 10:08 result.tar.gz
10:08:04 (39450): run_atlas exited; CPU time 48319.259117
10:08:04 (39450): called boinc_finish(0)

</stderr_txt>
]]>

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