Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:38:08 (217001): wrapper (7.7.26015): starting
07:38:08 (217001): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:38:08] Arguments: --nthreads 8
[2025-06-04 07:38:08] Threads: 8
[2025-06-04 07:38:08] Checking for CVMFS
[2025-06-04 07:38:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:38:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:38:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:38:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:38:08] 2.12.6.0 10346 1280 141392 146779 1 272 17540826 32935936 8386 16776704 0 17918650 99.951 1984330 36498 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:38:08] CVMFS is ok
[2025-06-04 07:38:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:38:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:38:08] Further information can be found at the LHC@home message board.
[2025-06-04 07:38:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:38:08] Checking for apptainer binary...
[2025-06-04 07:38:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:38:08] Running /usr/bin/apptainer --version
[2025-06-04 07:38:08] apptainer version 1.4.1-1.el9
[2025-06-04 07:38:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:38:08] c6-8-25-4.aglt2.org
[2025-06-04 07:38:08] apptainer works
[2025-06-04 07:38:08] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:38:08] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:38:08] Starting ATLAS job with PandaID=6678312599
[2025-06-04 07:38:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:37:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:37:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:37:18]  is_altstaged=None
[2025-06-04 08:37:18]  is_tar=False
[2025-06-04 08:37:18]  lfn=log.45006595._052045.job.log.tgz.1
[2025-06-04 08:37:18]  mtime=0
[2025-06-04 08:37:18]  protocol_id=None
[2025-06-04 08:37:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:37:18]  replicas=None
[2025-06-04 08:37:18]  scope=mc23_13p6TeV
[2025-06-04 08:37:18]  status=None
[2025-06-04 08:37:18]  status_code=0
[2025-06-04 08:37:18]  storage_token=
[2025-06-04 08:37:18]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678312599/log.45006595._052045.job.log.tgz.1
[2025-06-04 08:37:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/97/log.45006595._052045.job.log.tgz.1
[2025-06-04 08:37:18]  workdir=None
[2025-06-04 08:37:18] ]
[2025-06-04 08:37:18] 2025-06-04 12:36:54,282 | INFO     | transferring file log.45006595._052045.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678312599/log.45006595._052045.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:37:18] 2025-06-04 12:36:54,282 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678312599/log.45006595._052045.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._052045.job
[2025-06-04 08:37:18] 2025-06-04 12:36:54,300 | INFO     | adding to output.list: log.45006595._052045.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/97/log.45006595._052045.job.log.tg
[2025-06-04 08:37:18] 2025-06-04 12:36:54,301 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:37:18] 2025-06-04 12:36:54,301 | INFO     | summary of transferred files:
[2025-06-04 08:37:18] 2025-06-04 12:36:54,301 | INFO     |  -- lfn=log.45006595._052045.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:37:18] 2025-06-04 12:36:54,301 | INFO     | stage-out finished correctly
[2025-06-04 08:37:18] 2025-06-04 12:36:55,042 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:37:18] 2025-06-04 12:36:55,140 | INFO     | job 6678312599 has state=finished
[2025-06-04 08:37:18] 2025-06-04 12:36:55,141 | INFO     | preparing for final server update for job 6678312599 in state='finished'
[2025-06-04 08:37:18] 2025-06-04 12:36:55,141 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:37:18] 2025-06-04 12:36:55,142 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:37:18] 2025-06-04 12:36:55,142 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:37:18] 2025-06-04 12:36:55,142 | INFO     | job 6678312599 has finished - writing final server update
[2025-06-04 08:37:18] 2025-06-04 12:36:55,142 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:37:18] 2025-06-04 12:36:55,160 | INFO     | executing command: lscpu
[2025-06-04 08:37:18] 2025-06-04 12:36:55,249 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:37:18] 2025-06-04 12:36:55,443 | INFO     | monitor loop #263: job 0:6678312599 is in state 'finished'
[2025-06-04 08:37:18] 2025-06-04 12:36:55,443 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:37:18] 2025-06-04 12:36:57,946 | INFO     | monitor loop #264: job 0:6678312599 is in state 'finished'
[2025-06-04 08:37:18] 2025-06-04 12:36:57,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:37:18] 2025-06-04 12:36:58,010 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:37:18] 2025-06-04 12:36:58,011 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678312599/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:37:18] 2025-06-04 12:36:58,012 | INFO     | extracted standard info from prmon json
[2025-06-04 08:37:18] 2025-06-04 12:36:58,012 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:37:18] 2025-06-04 12:36:58,012 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:37:18] 2025-06-04 12:36:58,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:37:18] 2025-06-04 12:36:58,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:37:18] 2025-06-04 12:36:58,015 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:37:18] 2025-06-04 12:36:58,015 | INFO     | sum of square deviations: 41117050.0
[2025-06-04 08:37:18] 2025-06-04 12:36:58,016 | INFO     | sum of deviations: 3353786649.000001
[2025-06-04 08:37:18] 2025-06-04 12:36:58,016 | INFO     | mean x: 1749038947.0
[2025-06-04 08:37:18] 2025-06-04 12:36:58,016 | INFO     | mean y: 2235950.3333333335
[2025-06-04 08:37:18] 2025-06-04 12:36:58,016 | INFO     | -- intersect: -142661293389.18933
[2025-06-04 08:37:18] 2025-06-04 12:36:58,016 | INFO     | intersect: -142661293389.18933
[2025-06-04 08:37:18] 2025-06-04 12:36:58,016 | INFO     | chi2: 0.8395071586048917
[2025-06-04 08:37:18] 2025-06-04 12:36:58,017 | INFO     | -- intersect: -142661293389.18933
[2025-06-04 08:37:18] 2025-06-04 12:36:58,017 | INFO     | current memory leak: 81.57 B/s (using 51 data points, chi2=0.84)
[2025-06-04 08:37:18] 2025-06-04 12:36:58,017 | INFO     | ..............................
[2025-06-04 08:37:18] 2025-06-04 12:36:58,018 | INFO     | . Timing measurements:
[2025-06-04 08:37:18] 2025-06-04 12:36:58,018 | INFO     | . get job = 0 s
[2025-06-04 08:37:18] 2025-06-04 12:36:58,018 | INFO     | . initial setup = 2 s
[2025-06-04 08:37:18] 2025-06-04 12:36:58,018 | INFO     | . payload setup = 4 s
[2025-06-04 08:37:18] 2025-06-04 12:36:58,018 | INFO     | . stage-in = 0 s
[2025-06-04 08:37:18] 2025-06-04 12:36:58,018 | INFO     | . payload execution = 3495 s
[2025-06-04 08:37:18] 2025-06-04 12:36:58,018 | INFO     | . stage-out = 0 s
[2025-06-04 08:37:18] 2025-06-04 12:36:58,018 | INFO     | . log creation = 0 s
[2025-06-04 08:37:18] 2025-06-04 12:36:58,018 | INFO     | ..............................
[2025-06-04 08:37:18] 2025-06-04 12:36:58,247 | INFO     | 
[2025-06-04 08:37:18] 2025-06-04 12:36:58,248 | INFO     | job summary report
[2025-06-04 08:37:18] 2025-06-04 12:36:58,248 | INFO     | --------------------------------------------------
[2025-06-04 08:37:18] 2025-06-04 12:36:58,248 | INFO     | PanDA job id: 6678312599
[2025-06-04 08:37:18] 2025-06-04 12:36:58,248 | INFO     | task id: 45006595
[2025-06-04 08:37:18] 2025-06-04 12:36:58,248 | INFO     | errors: (none)
[2025-06-04 08:37:18] 2025-06-04 12:36:58,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:37:18] 2025-06-04 12:36:58,248 | INFO     | pilot state: finished 
[2025-06-04 08:37:18] 2025-06-04 12:36:58,248 | INFO     | transexitcode: 0
[2025-06-04 08:37:18] 2025-06-04 12:36:58,248 | INFO     | exeerrorcode: 0
[2025-06-04 08:37:18] 2025-06-04 12:36:58,248 | INFO     | exeerrordiag: 
[2025-06-04 08:37:18] 2025-06-04 12:36:58,248 | INFO     | exitcode: 0
[2025-06-04 08:37:18] 2025-06-04 12:36:58,248 | INFO     | exitmsg: OK
[2025-06-04 08:37:18] 2025-06-04 12:36:58,249 | INFO     | cpuconsumptiontime: 23246 s
[2025-06-04 08:37:18] 2025-06-04 12:36:58,249 | INFO     | nevents: 400
[2025-06-04 08:37:18] 2025-06-04 12:36:58,249 | INFO     | neventsw: 0
[2025-06-04 08:37:18] 2025-06-04 12:36:58,249 | INFO     | pid: 234780
[2025-06-04 08:37:18] 2025-06-04 12:36:58,249 | INFO     | pgrp: 234780
[2025-06-04 08:37:18] 2025-06-04 12:36:58,249 | INFO     | corecount: 8
[2025-06-04 08:37:18] 2025-06-04 12:36:58,249 | INFO     | event service: False
[2025-06-04 08:37:18] 2025-06-04 12:36:58,249 | INFO     | sizes: {0: 2397291, 3: 2397497, 11: 2397525, 3503: 2423125, 3504: 2423124, 3505: 2432305, 3508: 2432419}
[2025-06-04 08:37:18] 2025-06-04 12:36:58,249 | INFO     | --------------------------------------------------
[2025-06-04 08:37:18] 2025-06-04 12:36:58,249 | INFO     | 
[2025-06-04 08:37:18] 2025-06-04 12:36:58,249 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 08:37:18] 2025-06-04 12:36:58,268 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,268 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,268 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,268 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,269 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 12:36:58,270 | INFO     | job 6678312599 has completed (purged errors)
[2025-06-04 08:37:18] 2025-06-04 12:36:58,270 | INFO     | overall cleanup function is called
[2025-06-04 08:37:18] 2025-06-04 12:36:59,277 | INFO     | --- collectZombieJob: --- 10, [234780]
[2025-06-04 08:37:18] 2025-06-04 12:36:59,277 | INFO     | zombie collector waiting for pid 234780
[2025-06-04 08:37:18] 2025-06-04 12:36:59,277 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:37:18] 2025-06-04 12:36:59,277 | INFO     | collected zombie processes
[2025-06-04 08:37:18] 2025-06-04 12:36:59,277 | INFO     | will attempt to kill all subprocesses of pid=234780
[2025-06-04 08:37:18] 2025-06-04 12:36:59,499 | INFO     | process IDs to be killed: [234780] (in reverse order)
[2025-06-04 08:37:18] 2025-06-04 12:36:59,564 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:37:18] 2025-06-04 12:36:59,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:37:18] 2025-06-04 12:36:59,573 | INFO     | did not find any defunct processes belonging to 234780
[2025-06-04 08:37:18] 2025-06-04 12:36:59,583 | INFO     | did not find any defunct processes belonging to 234780
[2025-06-04 08:37:18] 2025-06-04 12:36:59,583 | INFO     | ready for new job
[2025-06-04 08:37:18] 2025-06-04 12:36:59,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:37:18] 2025-06-04 12:36:59,584 | INFO     | **************************************
[2025-06-04 08:37:18] 2025-06-04 12:36:59,584 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:37:18] 2025-06-04 12:36:59,585 | INFO     | **************************************
[2025-06-04 08:37:18] 2025-06-04 12:36:59,585 | INFO     | 
[2025-06-04 08:37:18] 2025-06-04 12:36:59,601 | INFO     | architecture information:
[2025-06-04 08:37:18] 2025-06-04 12:36:59,601 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:37:18] 2025-06-04 12:36:59,613 | INFO     | cat /etc/os-release:
[2025-06-04 08:37:18] NAME="CentOS Linux"
[2025-06-04 08:37:18] VERSION="7 (Core)"
[2025-06-04 08:37:18] ID="centos"
[2025-06-04 08:37:18] ID_LIKE="rhel fedora"
[2025-06-04 08:37:18] VERSION_ID="7"
[2025-06-04 08:37:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:37:18] ANSI_COLOR="0;31"
[2025-06-04 08:37:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:37:18] HOME_URL="https://www.centos.org/"
[2025-06-04 08:37:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:37:18] 
[2025-06-04 08:37:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:37:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:37:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:37:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:37:18] 
[2025-06-04 08:37:18] 2025-06-04 12:36:59,613 | INFO     | **************************************
[2025-06-04 08:37:18] 2025-06-04 12:37:00,115 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 08:37:18] 2025-06-04 12:37:00,131 | INFO     | sufficient remaining disk space (75576115200 B)
[2025-06-04 08:37:18] 2025-06-04 12:37:00,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:37:18] 2025-06-04 12:37:00,132 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:37:18] 2025-06-04 12:37:00,132 | INFO     | update_server=False
[2025-06-04 08:37:18] 2025-06-04 12:37:00,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:37:18] 2025-06-04 12:37:00,132 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:37:18] 2025-06-04 12:37:00,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:37:18] 2025-06-04 12:37:00,133 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:37:18] 2025-06-04 12:37:00,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:37:18] 2025-06-04 12:37:00,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:37:18] 2025-06-04 12:37:00,450 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:37:18] 2025-06-04 12:37:00,450 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:37:18] 2025-06-04 12:37:00,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:37:18] 2025-06-04 12:37:00,450 | INFO     | will abort loop
[2025-06-04 08:37:18] 2025-06-04 12:37:00,613 | INFO     | all payload control threads have been joined
[2025-06-04 08:37:18] 2025-06-04 12:37:00,796 | INFO     | all data control threads have been joined
[2025-06-04 08:37:18] 2025-06-04 12:37:00,796 | INFO     | all job control threads have been joined
[2025-06-04 08:37:18] 2025-06-04 12:37:01,137 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:01,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:37:18] 2025-06-04 12:37:01,455 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:01,618 | INFO     | [payload] control thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:01,783 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:01,801 | INFO     | [data] control thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:01,802 | INFO     | [job] control thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:01,880 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:02,139 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:02,271 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:02,478 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:02,522 | INFO     | [job] validate thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:02,553 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:02,611 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:03,126 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:37:18] 2025-06-04 12:37:04,132 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:05,147 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:11,180 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:37:18] 2025-06-04 12:37:12,185 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:37:18] 2025-06-04 12:37:13,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140316803884864)>', '<ExcThread(monitor, started 140316162119424)>']
[2025-06-04 08:37:18] 2025-06-04 12:37:14,196 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:37:18] 2025-06-04 12:37:14,196 | INFO     | [monitor] control thread has ended
[2025-06-04 08:37:18] 2025-06-04 12:37:18,267 | INFO     | all workflow threads have been joined
[2025-06-04 08:37:18] 2025-06-04 12:37:18,267 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:37:18] 2025-06-04 12:37:18,268 | INFO     | traces error code: 0
[2025-06-04 08:37:18] 2025-06-04 12:37:18,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:37:18] 2025-06-04 12:37:18,446 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:37:18] 2025-06-04 12:37:18,448 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:37:18] 2025-06-04 12:37:18,451 [wrapper] pilotpid: 221014
[2025-06-04 08:37:18] 2025-06-04 12:37:18,454 [wrapper] Pilot exit status: 0
[2025-06-04 08:37:18] 2025-06-04 12:37:18,462 [wrapper] pandaids: 6678312599
[2025-06-04 08:37:18] 2025-06-04 12:37:18,534 [wrapper] cleanup supervisor_pilot  399166 221015
[2025-06-04 08:37:18] 2025-06-04 12:37:18,536 [wrapper] Test setup, not cleaning
[2025-06-04 08:37:18] 2025-06-04 12:37:18,538 [wrapper] apfmon messages muted
[2025-06-04 08:37:18] 2025-06-04 12:37:18,539 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:37:18] 2025-06-04 12:37:18,541 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:37:18]  *** Error codes and diagnostics ***
[2025-06-04 08:37:18]     "exeErrorCode": 0,
[2025-06-04 08:37:18]     "exeErrorDiag": "",
[2025-06-04 08:37:18]     "pilotErrorCode": 0,
[2025-06-04 08:37:18]     "pilotErrorDiag": "",
[2025-06-04 08:37:18]  *** Listing of results directory ***
[2025-06-04 08:37:18] total 395452
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 08:37:18] -rwx------. 1 boincer umatlas     37140 Jun  4 00:12 runpilot2-wrapper.sh
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 00:12 queuedata.json
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:37:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:38 run_atlas
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:38 job.xml
[2025-06-04 08:37:18] -rw-r--r--. 2 boincer umatlas 218696823 Jun  4 07:38 EVNT.45006593._002084.pool.root.1
[2025-06-04 08:37:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:38 start_atlas.sh
[2025-06-04 08:37:18] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:38 shared
[2025-06-04 08:37:18] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 07:38 input.tar.gz
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:38 boinc_lockfile
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 07:38 pandaJob.out
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas    986812 Jun  4 07:38 agis_schedconf.cvmfs.json
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas   1598969 Jun  4 07:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:37:18] drwx------. 4 boincer umatlas      4096 Jun  4 07:38 pilot3
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas      6857 Jun  4 08:29 init_data.xml
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas        95 Jun  4 08:36 pilot_heartbeat.json
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas 181102423 Jun  4 08:36 HITS.45006595._052045.pool.root.1
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:36 boinc_task_state.xml
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas      1039 Jun  4 08:36 memory_monitor_summary.json
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas    299765 Jun  4 08:36 log.45006595._052045.job.log.tgz.1
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas      7714 Jun  4 08:36 heartbeat.json
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:37 boinc_mmap_file
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:37 wrapper_checkpoint.txt
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas      4734 Jun  4 08:37 pilotlog.txt
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas    356144 Jun  4 08:37 log.45006595._052045.job.log.1
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas       357 Jun  4 08:37 output.list
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:37 runtime_log
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas    675840 Jun  4 08:37 result.tar.gz
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 08:37 runtime_log.err
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas       651 Jun  4 08:37 nx9NDmkfug7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBfaKDmvwG4Dn.diag
[2025-06-04 08:37:18] -rw-r--r--. 1 boincer umatlas     21325 Jun  4 08:37 stderr.txt
[2025-06-04 08:37:18] HITS file was successfully produced:
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas 181102423 Jun  4 08:36 shared/HITS.pool.root.1
[2025-06-04 08:37:18]  *** Contents of shared directory: ***
[2025-06-04 08:37:18] total 391616
[2025-06-04 08:37:18] -rw-r--r--. 2 boincer umatlas 218696823 Jun  4 07:38 ATLAS.root_0
[2025-06-04 08:37:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:38 start_atlas.sh
[2025-06-04 08:37:18] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 07:38 input.tar.gz
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas 181102423 Jun  4 08:36 HITS.pool.root.1
[2025-06-04 08:37:18] -rw-------. 1 boincer umatlas    675840 Jun  4 08:37 result.tar.gz
08:37:20 (217001): run_atlas exited; CPU time 23366.221408
08:37:20 (217001): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN