Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:37:49 (3690069): wrapper (7.7.26015): starting
07:37:49 (3690069): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:37:49] Arguments: --nthreads 8
[2025-06-04 07:37:49] Threads: 8
[2025-06-04 07:37:49] Checking for CVMFS
[2025-06-04 07:37:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:37:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:37:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:37:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:37:49] 2.12.6.0 7995 1287 149280 146779 1 100 26383206 32935937 8061 16776704 0 17610290 99.940 1919077 32899 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:37:49] CVMFS is ok
[2025-06-04 07:37:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:37:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:37:49] Further information can be found at the LHC@home message board.
[2025-06-04 07:37:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:37:49] Checking for apptainer binary...
[2025-06-04 07:37:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:37:49] Running /usr/bin/apptainer --version
[2025-06-04 07:37:50] apptainer version 1.4.1-1.el9
[2025-06-04 07:37:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:37:50] c6-8-25-2.aglt2.org
[2025-06-04 07:37:50] apptainer works
[2025-06-04 07:37:50] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:37:50] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:37:50] Starting ATLAS job with PandaID=6678365344
[2025-06-04 07:37:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:39:17]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:39:17]  lfn=log.45006595._054375.job.log.tgz.1
[2025-06-04 08:39:17]  mtime=0
[2025-06-04 08:39:17]  protocol_id=None
[2025-06-04 08:39:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:39:17]  replicas=None
[2025-06-04 08:39:17]  scope=mc23_13p6TeV
[2025-06-04 08:39:17]  status=None
[2025-06-04 08:39:17]  status_code=0
[2025-06-04 08:39:17]  storage_token=
[2025-06-04 08:39:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678365344/log.45006595._054375.job.log.tgz.1
[2025-06-04 08:39:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/55/log.45006595._054375.job.log.tgz.1
[2025-06-04 08:39:17]  workdir=None
[2025-06-04 08:39:17] ]
[2025-06-04 08:39:17] 2025-06-04 12:39:00,506 | INFO     | transferring file log.45006595._054375.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678365344/log.45006595._054375.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:39:17] 2025-06-04 12:39:00,506 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678365344/log.45006595._054375.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054375.job
[2025-06-04 08:39:17] 2025-06-04 12:39:00,520 | INFO     | adding to output.list: log.45006595._054375.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/55/log.45006595._054375.job.log.tg
[2025-06-04 08:39:17] 2025-06-04 12:39:00,521 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:39:17] 2025-06-04 12:39:00,521 | INFO     | summary of transferred files:
[2025-06-04 08:39:17] 2025-06-04 12:39:00,521 | INFO     |  -- lfn=log.45006595._054375.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:39:17] 2025-06-04 12:39:00,522 | INFO     | stage-out finished correctly
[2025-06-04 08:39:17] 2025-06-04 12:39:00,620 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:39:17] 2025-06-04 12:39:00,717 | INFO     | job 6678365344 has state=finished
[2025-06-04 08:39:17] 2025-06-04 12:39:00,718 | INFO     | preparing for final server update for job 6678365344 in state='finished'
[2025-06-04 08:39:17] 2025-06-04 12:39:00,719 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:39:17] 2025-06-04 12:39:00,719 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:39:17] 2025-06-04 12:39:00,719 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:39:17] 2025-06-04 12:39:00,720 | INFO     | job 6678365344 has finished - writing final server update
[2025-06-04 08:39:17] 2025-06-04 12:39:00,720 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:39:17] 2025-06-04 12:39:00,739 | INFO     | executing command: lscpu
[2025-06-04 08:39:17] 2025-06-04 12:39:00,812 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:39:17] 2025-06-04 12:39:03,317 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:39:17] 2025-06-04 12:39:03,317 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678365344/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:39:17] 2025-06-04 12:39:03,318 | INFO     | extracted standard info from prmon json
[2025-06-04 08:39:17] 2025-06-04 12:39:03,319 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:39:17] 2025-06-04 12:39:03,319 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:39:17] 2025-06-04 12:39:03,319 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:39:17] 2025-06-04 12:39:03,319 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:39:17] 2025-06-04 12:39:03,321 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:39:17] 2025-06-04 12:39:03,321 | INFO     | sum of square deviations: 46147842.0
[2025-06-04 08:39:17] 2025-06-04 12:39:03,322 | INFO     | sum of deviations: 4655153512.000001
[2025-06-04 08:39:17] 2025-06-04 12:39:03,322 | INFO     | mean x: 1749038987.0
[2025-06-04 08:39:17] 2025-06-04 12:39:03,322 | INFO     | mean y: 2210688.6981132077
[2025-06-04 08:39:17] 2025-06-04 12:39:03,322 | INFO     | -- intersect: -176431716231.61105
[2025-06-04 08:39:17] 2025-06-04 12:39:03,322 | INFO     | intersect: -176431716231.61105
[2025-06-04 08:39:17] 2025-06-04 12:39:03,322 | INFO     | chi2: 0.7999122605379435
[2025-06-04 08:39:17] 2025-06-04 12:39:03,322 | INFO     | -- intersect: -176431716231.61105
[2025-06-04 08:39:17] 2025-06-04 12:39:03,322 | INFO     | current memory leak: 100.87 B/s (using 53 data points, chi2=0.80)
[2025-06-04 08:39:17] 2025-06-04 12:39:03,323 | INFO     | ..............................
[2025-06-04 08:39:17] 2025-06-04 12:39:03,323 | INFO     | . Timing measurements:
[2025-06-04 08:39:17] 2025-06-04 12:39:03,323 | INFO     | . get job = 0 s
[2025-06-04 08:39:17] 2025-06-04 12:39:03,323 | INFO     | . initial setup = 2 s
[2025-06-04 08:39:17] 2025-06-04 12:39:03,323 | INFO     | . payload setup = 3 s
[2025-06-04 08:39:17] 2025-06-04 12:39:03,323 | INFO     | . stage-in = 0 s
[2025-06-04 08:39:17] 2025-06-04 12:39:03,323 | INFO     | . payload execution = 3642 s
[2025-06-04 08:39:17] 2025-06-04 12:39:03,323 | INFO     | . stage-out = 0 s
[2025-06-04 08:39:17] 2025-06-04 12:39:03,323 | INFO     | . log creation = 0 s
[2025-06-04 08:39:17] 2025-06-04 12:39:03,323 | INFO     | ..............................
[2025-06-04 08:39:17] 2025-06-04 12:39:03,413 | INFO     | 
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | job summary report
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | --------------------------------------------------
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | PanDA job id: 6678365344
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | task id: 45006595
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | errors: (none)
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | pilot state: finished 
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | transexitcode: 0
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | exeerrorcode: 0
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | exeerrordiag: 
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | exitcode: 0
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | exitmsg: OK
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | cpuconsumptiontime: 23934 s
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | nevents: 400
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | neventsw: 0
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | pid: 3709274
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | pgrp: 3709274
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | corecount: 8
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | event service: False
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 3649: 2423233, 3650: 2423232, 3651: 2432413, 3654: 2432527}
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | --------------------------------------------------
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | 
[2025-06-04 08:39:17] 2025-06-04 12:39:03,414 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:39:17] 2025-06-04 12:39:03,429 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,429 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:39:17] 2025-06-04 12:39:03,429 | INFO     | job 6678365344 has completed (purged errors)
[2025-06-04 08:39:17] 2025-06-04 12:39:03,429 | INFO     | overall cleanup function is called
[2025-06-04 08:39:17] 2025-06-04 12:39:04,435 | INFO     | --- collectZombieJob: --- 10, [3709274]
[2025-06-04 08:39:17] 2025-06-04 12:39:04,436 | INFO     | zombie collector waiting for pid 3709274
[2025-06-04 08:39:17] 2025-06-04 12:39:04,436 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:39:17] 2025-06-04 12:39:04,436 | INFO     | collected zombie processes
[2025-06-04 08:39:17] 2025-06-04 12:39:04,436 | INFO     | will attempt to kill all subprocesses of pid=3709274
[2025-06-04 08:39:17] 2025-06-04 12:39:04,757 | INFO     | process IDs to be killed: [3709274] (in reverse order)
[2025-06-04 08:39:17] 2025-06-04 12:39:04,819 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:39:17] 2025-06-04 12:39:04,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:39:17] 2025-06-04 12:39:04,832 | INFO     | did not find any defunct processes belonging to 3709274
[2025-06-04 08:39:17] 2025-06-04 12:39:04,844 | INFO     | did not find any defunct processes belonging to 3709274
[2025-06-04 08:39:17] 2025-06-04 12:39:04,844 | INFO     | ready for new job
[2025-06-04 08:39:17] 2025-06-04 12:39:04,844 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:39:17] 2025-06-04 12:39:04,846 | INFO     | **************************************
[2025-06-04 08:39:17] 2025-06-04 12:39:04,846 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:39:17] 2025-06-04 12:39:04,846 | INFO     | **************************************
[2025-06-04 08:39:17] 2025-06-04 12:39:04,846 | INFO     | 
[2025-06-04 08:39:17] 2025-06-04 12:39:04,863 | INFO     | architecture information:
[2025-06-04 08:39:17] 2025-06-04 12:39:04,864 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:39:17] 2025-06-04 12:39:04,878 | INFO     | cat /etc/os-release:
[2025-06-04 08:39:17] NAME="CentOS Linux"
[2025-06-04 08:39:17] VERSION="7 (Core)"
[2025-06-04 08:39:17] ID="centos"
[2025-06-04 08:39:17] ID_LIKE="rhel fedora"
[2025-06-04 08:39:17] VERSION_ID="7"
[2025-06-04 08:39:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:39:17] ANSI_COLOR="0;31"
[2025-06-04 08:39:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:39:17] HOME_URL="https://www.centos.org/"
[2025-06-04 08:39:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:39:17] 
[2025-06-04 08:39:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:39:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:39:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:39:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:39:17] 
[2025-06-04 08:39:17] 2025-06-04 12:39:04,878 | INFO     | **************************************
[2025-06-04 08:39:17] 2025-06-04 12:39:05,381 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:39:17] 2025-06-04 12:39:05,397 | INFO     | sufficient remaining disk space (75550949376 B)
[2025-06-04 08:39:17] 2025-06-04 12:39:05,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:39:17] 2025-06-04 12:39:05,397 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:39:17] 2025-06-04 12:39:05,398 | INFO     | update_server=False
[2025-06-04 08:39:17] 2025-06-04 12:39:05,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:39:17] 2025-06-04 12:39:05,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:39:17] 2025-06-04 12:39:05,572 | WARNING  | process 3709274 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:39:17] 2025-06-04 12:39:05,732 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:39:17] 2025-06-04 12:39:05,732 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:39:17] 2025-06-04 12:39:05,733 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6678365344/payload.stdout) since it has not been created yet
[2025-06-04 08:39:17] 2025-06-04 12:39:05,733 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:39:17] 2025-06-04 12:39:05,747 | INFO     | sufficient remaining disk space (75550949376 B)
[2025-06-04 08:39:17] 2025-06-04 12:39:05,747 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-06-04 08:39:17] 2025-06-04 12:39:05,747 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678365344/HITS.45006595._054375.pool.root.1 since it does not exist
[2025-06-04 08:39:17] 2025-06-04 12:39:05,827 | INFO     | all job control threads have been joined
[2025-06-04 08:39:17] 2025-06-04 12:39:05,861 | INFO     | all payload control threads have been joined
[2025-06-04 08:39:17] 2025-06-04 12:39:05,957 | INFO     | all data control threads have been joined
[2025-06-04 08:39:17] 2025-06-04 12:39:06,006 | INFO     | number of running child processes to parent process 3709274: 1
[2025-06-04 08:39:17] 2025-06-04 12:39:06,006 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:39:17] 2025-06-04 12:39:06,006 | INFO     | aborting job monitoring since job object (job id=6678365344) has expired
[2025-06-04 08:39:17] 2025-06-04 12:39:06,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:39:17] 2025-06-04 12:39:06,007 | INFO     | will abort loop
[2025-06-04 08:39:17] 2025-06-04 12:39:06,121 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:39:17] 2025-06-04 12:39:06,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:39:17] 2025-06-04 12:39:06,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:39:17] 2025-06-04 12:39:06,127 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:39:17] 2025-06-04 12:39:06,403 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:06,403 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:06,584 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:06,721 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:39:17] 2025-06-04 12:39:06,766 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:06,833 | INFO     | [job] control thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:06,866 | INFO     | [payload] control thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:06,963 | INFO     | [data] control thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:07,012 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:07,142 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:07,167 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:07,182 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:07,193 | INFO     | [job] validate thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:07,259 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:07,720 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:08,133 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:10,725 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:39:17] 2025-06-04 12:39:12,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313631872832)>', '<ExcThread(monitor, started 140313125435136)>']
[2025-06-04 08:39:17] 2025-06-04 12:39:13,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:39:17] 2025-06-04 12:39:13,151 | INFO     | [monitor] control thread has ended
[2025-06-04 08:39:17] 2025-06-04 12:39:17,308 | INFO     | all workflow threads have been joined
[2025-06-04 08:39:17] 2025-06-04 12:39:17,308 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:39:17] 2025-06-04 12:39:17,308 | INFO     | traces error code: 0
[2025-06-04 08:39:17] 2025-06-04 12:39:17,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:39:17] 2025-06-04 12:39:17,444 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:39:17] 2025-06-04 12:39:17,446 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:39:17] 2025-06-04 12:39:17,449 [wrapper] pilotpid: 3696705
[2025-06-04 08:39:17] 2025-06-04 12:39:17,451 [wrapper] Pilot exit status: 0
[2025-06-04 08:39:17] 2025-06-04 12:39:17,460 [wrapper] pandaids: 6678365344
[2025-06-04 08:39:17] 2025-06-04 12:39:17,530 [wrapper] cleanup supervisor_pilot 3927502 3696706
[2025-06-04 08:39:17] 2025-06-04 12:39:17,532 [wrapper] Test setup, not cleaning
[2025-06-04 08:39:17] 2025-06-04 12:39:17,534 [wrapper] apfmon messages muted
[2025-06-04 08:39:17] 2025-06-04 12:39:17,536 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:39:17] 2025-06-04 12:39:17,538 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:39:17]  *** Error codes and diagnostics ***
[2025-06-04 08:39:17]     "exeErrorCode": 0,
[2025-06-04 08:39:17]     "exeErrorDiag": "",
[2025-06-04 08:39:17]     "pilotErrorCode": 0,
[2025-06-04 08:39:17]     "pilotErrorDiag": "",
[2025-06-04 08:39:17]  *** Listing of results directory ***
[2025-06-04 08:39:17] total 391220
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:35 queuedata.json
[2025-06-04 08:39:17] -rwx------. 1 boincer umatlas     37140 Jun  4 02:35 runpilot2-wrapper.sh
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:39:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:37 run_atlas
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:37 job.xml
[2025-06-04 08:39:17] -rw-r--r--. 2 boincer umatlas 215037831 Jun  4 07:37 EVNT.45006593._002176.pool.root.1
[2025-06-04 08:39:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:37 start_atlas.sh
[2025-06-04 08:39:17] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:37 shared
[2025-06-04 08:39:17] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 07:37 input.tar.gz
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:37 boinc_lockfile
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:37 pandaJob.out
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas    986812 Jun  4 07:37 agis_schedconf.cvmfs.json
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas   1598969 Jun  4 07:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:39:17] drwx------. 4 boincer umatlas      4096 Jun  4 07:37 pilot3
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas      6852 Jun  4 08:37 init_data.xml
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas 180389698 Jun  4 08:38 HITS.45006595._054375.pool.root.1
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:38 boinc_task_state.xml
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas      1037 Jun  4 08:38 memory_monitor_summary.json
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas    299572 Jun  4 08:39 log.45006595._054375.job.log.tgz.1
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas      7723 Jun  4 08:39 heartbeat.json
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas        95 Jun  4 08:39 pilot_heartbeat.json
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:39 boinc_mmap_file
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:39 wrapper_checkpoint.txt
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas      5632 Jun  4 08:39 pilotlog.txt
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas    372617 Jun  4 08:39 log.45006595._054375.job.log.1
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas       357 Jun  4 08:39 output.list
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:39 runtime_log
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas    696320 Jun  4 08:39 result.tar.gz
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas       651 Jun  4 08:39 YQZLDm0twg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqsaKDmkOikQo.diag
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 08:39 runtime_log.err
[2025-06-04 08:39:17] -rw-r--r--. 1 boincer umatlas     21722 Jun  4 08:39 stderr.txt
[2025-06-04 08:39:17] HITS file was successfully produced:
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas 180389698 Jun  4 08:38 shared/HITS.pool.root.1
[2025-06-04 08:39:17]  *** Contents of shared directory: ***
[2025-06-04 08:39:17] total 387368
[2025-06-04 08:39:17] -rw-r--r--. 2 boincer umatlas 215037831 Jun  4 07:37 ATLAS.root_0
[2025-06-04 08:39:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:37 start_atlas.sh
[2025-06-04 08:39:17] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 07:37 input.tar.gz
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas 180389698 Jun  4 08:38 HITS.pool.root.1
[2025-06-04 08:39:17] -rw-------. 1 boincer umatlas    696320 Jun  4 08:39 result.tar.gz
08:39:19 (3690069): run_atlas exited; CPU time 24040.297511
08:39:19 (3690069): called boinc_finish(0)

</stderr_txt>
]]>

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