Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:32:55 (45585): wrapper (7.7.26015): starting
07:32:55 (45585): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:32:55] Arguments: --nthreads 8
[2025-06-04 07:32:55] Threads: 8
[2025-06-04 07:32:55] Checking for CVMFS
[2025-06-04 07:32:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:32:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:32:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:32:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:32:55] 2.11.2.0 29495 107803 306184 146779 3 63 13310281 18432000 5215 130560 0 275350083 98.769 735885281 37227 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 07:32:55] CVMFS is ok
[2025-06-04 07:32:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:32:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:32:55] Further information can be found at the LHC@home message board.
[2025-06-04 07:32:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:32:55] Checking for apptainer binary...
[2025-06-04 07:32:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:32:55] Running /usr/bin/apptainer --version
[2025-06-04 07:32:55] apptainer version 1.3.2-1.el7
[2025-06-04 07:32:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:32:56] c-211-7.aglt2.org
[2025-06-04 07:32:56] apptainer works
[2025-06-04 07:32:56] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:32:56] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:32:56] Starting ATLAS job with PandaID=6678390197
[2025-06-04 07:32:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:18:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:18:25] 2025-06-04 13:18:03,560 | INFO     | number of running child processes to parent process 7506: 1
[2025-06-04 09:18:25] 2025-06-04 13:18:03,560 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:18:25] 2025-06-04 13:18:04,951 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-06-04 09:18:25] 2025-06-04 13:18:05,398 | INFO     | PID=398 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-06-04 09:18:25] 2025-06-04 13:18:05,398 | INFO     | .. there are 9 such processes running
[2025-06-04 09:18:25] 2025-06-04 13:18:06,063 | INFO     | monitor loop #469: job 0:6678390197 is in state 'finished'
[2025-06-04 09:18:25] 2025-06-04 13:18:06,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:18:25] 2025-06-04 13:18:06,378 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:18:25] 2025-06-04 13:18:06,378 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678390197/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:18:25] 2025-06-04 13:18:06,379 | INFO     | extracted standard info from prmon json
[2025-06-04 09:18:25] 2025-06-04 13:18:06,379 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:18:25] 2025-06-04 13:18:06,379 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:18:25] 2025-06-04 13:18:06,379 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:18:25] 2025-06-04 13:18:06,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:18:25] 2025-06-04 13:18:06,381 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:18:25] 2025-06-04 13:18:06,381 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 09:18:25] 2025-06-04 13:18:06,381 | INFO     | sum of deviations: -3876335829.0
[2025-06-04 09:18:25] 2025-06-04 13:18:06,381 | INFO     | mean x: 1749039928.0
[2025-06-04 09:18:25] 2025-06-04 13:18:06,381 | INFO     | mean y: 2542154.281553398
[2025-06-04 09:18:25] 2025-06-04 13:18:06,381 | INFO     | -- intersect: 20013688108.20822
[2025-06-04 09:18:25] 2025-06-04 13:18:06,381 | INFO     | intersect: 20013688108.20822
[2025-06-04 09:18:25] 2025-06-04 13:18:06,381 | INFO     | chi2: 1.5059279203875484
[2025-06-04 09:18:25] 2025-06-04 13:18:06,382 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 09:18:25] 2025-06-04 13:18:06,382 | INFO     | sum of deviations: -2979487538.000001
[2025-06-04 09:18:25] 2025-06-04 13:18:06,382 | INFO     | mean x: 1749039775.5
[2025-06-04 09:18:25] 2025-06-04 13:18:06,382 | INFO     | mean y: 2545067.06122449
[2025-06-04 09:18:25] 2025-06-04 13:18:06,382 | INFO     | -- intersect: 17860422208.546894
[2025-06-04 09:18:25] 2025-06-04 13:18:06,382 | INFO     | intersect: 17860422208.546894
[2025-06-04 09:18:25] 2025-06-04 13:18:06,382 | INFO     | chi2: 1.507965756497374
[2025-06-04 09:18:25] 2025-06-04 13:18:06,382 | INFO     | current chi2=1.507965756497374 (change=-0.13532095940562874 %)
[2025-06-04 09:18:25] 2025-06-04 13:18:06,382 | INFO     | right removable region: 97
[2025-06-04 09:18:25] 2025-06-04 13:18:06,383 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 09:18:25] 2025-06-04 13:18:06,383 | INFO     | sum of deviations: -18385925850.5
[2025-06-04 09:18:25] 2025-06-04 13:18:06,383 | INFO     | mean x: 1749040080.5
[2025-06-04 09:18:25] 2025-06-04 13:18:06,383 | INFO     | mean y: 2588145.4795918367
[2025-06-04 09:18:25] 2025-06-04 13:18:06,383 | INFO     | -- intersect: 110200619866.85513
[2025-06-04 09:18:25] 2025-06-04 13:18:06,383 | INFO     | intersect: 110200619866.85513
[2025-06-04 09:18:25] 2025-06-04 13:18:06,383 | INFO     | chi2: 0.08678984301875219
[2025-06-04 09:18:25] 2025-06-04 13:18:06,383 | INFO     | current chi2=0.08678984301875219 (change=94.23678637976133 %)
[2025-06-04 09:18:25] 2025-06-04 13:18:06,384 | INFO     | sum of square deviations: 249388862.0
[2025-06-04 09:18:25] 2025-06-04 13:18:06,384 | INFO     | sum of deviations: -16558799408.000008
[2025-06-04 09:18:25] 2025-06-04 13:18:06,384 | INFO     | mean x: 1749040233.0
[2025-06-04 09:18:25] 2025-06-04 13:18:06,384 | INFO     | mean y: 2581547.623655914
[2025-06-04 09:18:25] 2025-06-04 13:18:06,384 | INFO     | -- intersect: 116134497554.23582
[2025-06-04 09:18:25] 2025-06-04 13:18:06,384 | INFO     | intersect: 116134497554.23582
[2025-06-04 09:18:25] 2025-06-04 13:18:06,384 | INFO     | chi2: 0.08412985010501703
[2025-06-04 09:18:25] 2025-06-04 13:18:06,384 | INFO     | current chi2=0.08412985010501703 (change=3.0648666032964567 %)
[2025-06-04 09:18:25] 2025-06-04 13:18:06,384 | INFO     | left removable region: 20
[2025-06-04 09:18:25] 2025-06-04 13:18:06,384 | INFO     | sum of square deviations: 141539398.0
[2025-06-04 09:18:25] 2025-06-04 13:18:06,385 | INFO     | sum of deviations: -10611182410.0
[2025-06-04 09:18:25] 2025-06-04 13:18:06,385 | INFO     | mean x: 1749040355.0
[2025-06-04 09:18:25] 2025-06-04 13:18:06,385 | INFO     | mean y: 2567109.3766233767
[2025-06-04 09:18:25] 2025-06-04 13:18:06,385 | INFO     | -- intersect: 131127798045.82693
[2025-06-04 09:18:25] 2025-06-04 13:18:06,385 | INFO     | intersect: 131127798045.82693
[2025-06-04 09:18:25] 2025-06-04 13:18:06,385 | INFO     | chi2: 0.07621294109098325
[2025-06-04 09:18:25] 2025-06-04 13:18:06,385 | INFO     | -- intersect: 131127798045.82693
[2025-06-04 09:18:25] 2025-06-04 13:18:06,385 | INFO     | current memory leak: -74.97 B/s (using 77 data points, chi2=0.08)
[2025-06-04 09:18:25] 2025-06-04 13:18:06,386 | INFO     | ..............................
[2025-06-04 09:18:25] 2025-06-04 13:18:06,386 | INFO     | . Timing measurements:
[2025-06-04 09:18:25] 2025-06-04 13:18:06,386 | INFO     | . get job = 0 s
[2025-06-04 09:18:25] 2025-06-04 13:18:06,386 | INFO     | . initial setup = 2 s
[2025-06-04 09:18:25] 2025-06-04 13:18:06,386 | INFO     | . payload setup = 7 s
[2025-06-04 09:18:25] 2025-06-04 13:18:06,386 | INFO     | . stage-in = 0 s
[2025-06-04 09:18:25] 2025-06-04 13:18:06,386 | INFO     | . payload execution = 6262 s
[2025-06-04 09:18:25] 2025-06-04 13:18:06,386 | INFO     | . stage-out = 0 s
[2025-06-04 09:18:25] 2025-06-04 13:18:06,386 | INFO     | . log creation = 0 s
[2025-06-04 09:18:25] 2025-06-04 13:18:06,386 | INFO     | ..............................
[2025-06-04 09:18:25] 2025-06-04 13:18:06,726 | INFO     | 
[2025-06-04 09:18:25] 2025-06-04 13:18:06,726 | INFO     | job summary report
[2025-06-04 09:18:25] 2025-06-04 13:18:06,726 | INFO     | --------------------------------------------------
[2025-06-04 09:18:25] 2025-06-04 13:18:06,726 | INFO     | PanDA job id: 6678390197
[2025-06-04 09:18:25] 2025-06-04 13:18:06,726 | INFO     | task id: 45006595
[2025-06-04 09:18:25] 2025-06-04 13:18:06,727 | INFO     | errors: (none)
[2025-06-04 09:18:25] 2025-06-04 13:18:06,727 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:18:25] 2025-06-04 13:18:06,727 | INFO     | pilot state: finished 
[2025-06-04 09:18:25] 2025-06-04 13:18:06,727 | INFO     | transexitcode: 0
[2025-06-04 09:18:25] 2025-06-04 13:18:06,727 | INFO     | exeerrorcode: 0
[2025-06-04 09:18:25] 2025-06-04 13:18:06,727 | INFO     | exeerrordiag: 
[2025-06-04 09:18:25] 2025-06-04 13:18:06,727 | INFO     | exitcode: 0
[2025-06-04 09:18:25] 2025-06-04 13:18:06,727 | INFO     | exitmsg: OK
[2025-06-04 09:18:25] 2025-06-04 13:18:06,727 | INFO     | cpuconsumptiontime: 46020 s
[2025-06-04 09:18:25] 2025-06-04 13:18:06,727 | INFO     | nevents: 400
[2025-06-04 09:18:25] 2025-06-04 13:18:06,728 | INFO     | neventsw: 0
[2025-06-04 09:18:25] 2025-06-04 13:18:06,728 | INFO     | pid: 7506
[2025-06-04 09:18:25] 2025-06-04 13:18:06,728 | INFO     | pgrp: 7506
[2025-06-04 09:18:25] 2025-06-04 13:18:06,728 | INFO     | corecount: 8
[2025-06-04 09:18:25] 2025-06-04 13:18:06,728 | INFO     | event service: False
[2025-06-04 09:18:25] 2025-06-04 13:18:06,728 | INFO     | sizes: {0: 2397341, 5: 2397547, 11: 2397603, 6273: 2424526, 6275: 2433467, 6277: 2433523, 6282: 2433821}
[2025-06-04 09:18:25] 2025-06-04 13:18:06,728 | INFO     | --------------------------------------------------
[2025-06-04 09:18:25] 2025-06-04 13:18:06,728 | INFO     | 
[2025-06-04 09:18:25] 2025-06-04 13:18:06,728 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:18:25] 2025-06-04 13:18:06,744 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,744 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,746 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:18:25] 2025-06-04 13:18:06,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,746 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:18:25] 2025-06-04 13:18:06,746 | INFO     | job 6678390197 has completed (purged errors)
[2025-06-04 09:18:25] 2025-06-04 13:18:06,746 | INFO     | overall cleanup function is called
[2025-06-04 09:18:25] 2025-06-04 13:18:07,753 | INFO     | --- collectZombieJob: --- 10, [7506]
[2025-06-04 09:18:25] 2025-06-04 13:18:07,753 | INFO     | zombie collector waiting for pid 7506
[2025-06-04 09:18:25] 2025-06-04 13:18:07,753 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:18:25] 2025-06-04 13:18:07,753 | INFO     | collected zombie processes
[2025-06-04 09:18:25] 2025-06-04 13:18:07,753 | INFO     | will attempt to kill all subprocesses of pid=7506
[2025-06-04 09:18:25] 2025-06-04 13:18:07,903 | INFO     | process IDs to be killed: [7506] (in reverse order)
[2025-06-04 09:18:25] 2025-06-04 13:18:07,983 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:18:25] 2025-06-04 13:18:07,984 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:18:25] 2025-06-04 13:18:07,990 | INFO     | did not find any defunct processes belonging to 7506
[2025-06-04 09:18:25] 2025-06-04 13:18:07,995 | INFO     | did not find any defunct processes belonging to 7506
[2025-06-04 09:18:25] 2025-06-04 13:18:07,995 | INFO     | ready for new job
[2025-06-04 09:18:25] 2025-06-04 13:18:07,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:18:25] 2025-06-04 13:18:07,997 | INFO     | **************************************
[2025-06-04 09:18:25] 2025-06-04 13:18:07,998 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:18:25] 2025-06-04 13:18:07,998 | INFO     | **************************************
[2025-06-04 09:18:25] 2025-06-04 13:18:07,998 | INFO     | 
[2025-06-04 09:18:25] 2025-06-04 13:18:08,000 | INFO     | architecture information:
[2025-06-04 09:18:25] 2025-06-04 13:18:08,001 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:18:25] 2025-06-04 13:18:08,013 | INFO     | cat /etc/os-release:
[2025-06-04 09:18:25] NAME="CentOS Linux"
[2025-06-04 09:18:25] VERSION="7 (Core)"
[2025-06-04 09:18:25] ID="centos"
[2025-06-04 09:18:25] ID_LIKE="rhel fedora"
[2025-06-04 09:18:25] VERSION_ID="7"
[2025-06-04 09:18:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:18:25] ANSI_COLOR="0;31"
[2025-06-04 09:18:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:18:25] HOME_URL="https://www.centos.org/"
[2025-06-04 09:18:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:18:25] 
[2025-06-04 09:18:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:18:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:18:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:18:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:18:25] 
[2025-06-04 09:18:25] 2025-06-04 13:18:08,013 | INFO     | **************************************
[2025-06-04 09:18:25] 2025-06-04 13:18:08,514 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:18:25] 2025-06-04 13:18:08,577 | INFO     | sufficient remaining disk space (56654561280 B)
[2025-06-04 09:18:25] 2025-06-04 13:18:08,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:18:25] 2025-06-04 13:18:08,578 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:18:25] 2025-06-04 13:18:08,578 | INFO     | update_server=False
[2025-06-04 09:18:25] 2025-06-04 13:18:08,578 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:18:25] 2025-06-04 13:18:08,684 | INFO     | all job control threads have been joined
[2025-06-04 09:18:25] 2025-06-04 13:18:08,702 | INFO     | all data control threads have been joined
[2025-06-04 09:18:25] 2025-06-04 13:18:08,746 | INFO     | all payload control threads have been joined
[2025-06-04 09:18:25] 2025-06-04 13:18:09,409 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:18:25] 2025-06-04 13:18:09,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:18:25] 2025-06-04 13:18:09,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:18:25] 2025-06-04 13:18:09,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:18:25] 2025-06-04 13:18:09,572 | INFO     | aborting loop
[2025-06-04 09:18:25] 2025-06-04 13:18:09,583 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:09,593 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:09,687 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:09,689 | INFO     | [job] control thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:09,707 | INFO     | [data] control thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:09,751 | INFO     | [payload] control thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:09,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:18:25] 2025-06-04 13:18:09,802 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:09,968 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:10,460 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:10,573 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:10,734 | INFO     | [job] validate thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:11,011 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:11,451 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:18:25] 2025-06-04 13:18:11,765 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:11,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:18:25] 2025-06-04 13:18:12,456 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:15,911 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:18,761 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:18:25] 2025-06-04 13:18:19,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:18:25] 2025-06-04 13:18:19,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140277843715904)>', '<ExcThread(monitor, started 140277188654848)>']
[2025-06-04 09:18:25] 2025-06-04 13:18:20,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:18:25] 2025-06-04 13:18:20,469 | INFO     | [monitor] control thread has ended
[2025-06-04 09:18:25] 2025-06-04 13:18:24,850 | INFO     | all workflow threads have been joined
[2025-06-04 09:18:25] 2025-06-04 13:18:24,850 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:18:25] 2025-06-04 13:18:24,850 | INFO     | traces error code: 0
[2025-06-04 09:18:25] 2025-06-04 13:18:24,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:18:25] 2025-06-04 13:18:24,941 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:18:25] 2025-06-04 13:18:24,944 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:18:25] 2025-06-04 13:18:24,946 [wrapper] pilotpid: 398
[2025-06-04 09:18:25] 2025-06-04 13:18:24,949 [wrapper] Pilot exit status: 0
[2025-06-04 09:18:25] 2025-06-04 13:18:24,960 [wrapper] pandaids: 6678390197
[2025-06-04 09:18:25] 2025-06-04 13:18:25,017 [wrapper] cleanup supervisor_pilot 40505 399
[2025-06-04 09:18:25] 2025-06-04 13:18:25,019 [wrapper] Test setup, not cleaning
[2025-06-04 09:18:25] 2025-06-04 13:18:25,022 [wrapper] apfmon messages muted
[2025-06-04 09:18:25] 2025-06-04 13:18:25,025 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:18:25] 2025-06-04 13:18:25,027 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:18:25]  *** Error codes and diagnostics ***
[2025-06-04 09:18:25]     "exeErrorCode": 0,
[2025-06-04 09:18:25]     "exeErrorDiag": "",
[2025-06-04 09:18:25]     "pilotErrorCode": 0,
[2025-06-04 09:18:25]     "pilotErrorDiag": "",
[2025-06-04 09:18:25]  *** Listing of results directory ***
[2025-06-04 09:18:25] total 391812
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:48 queuedata.json
[2025-06-04 09:18:25] -rwx------ 1 boincer umatlas     37140 Jun  4 02:48 runpilot2-wrapper.sh
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:18:25] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:32 run_atlas
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:32 job.xml
[2025-06-04 09:18:25] -rw-r--r-- 2 boincer umatlas 214248470 Jun  4 07:32 EVNT.45006593._002186.pool.root.1
[2025-06-04 09:18:25] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:32 start_atlas.sh
[2025-06-04 09:18:25] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:32 shared
[2025-06-04 09:18:25] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 07:32 input.tar.gz
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:32 boinc_lockfile
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 07:32 pandaJob.out
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas    986812 Jun  4 07:33 agis_schedconf.cvmfs.json
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas   1598969 Jun  4 07:33 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:18:25] drwx------ 4 boincer umatlas      4096 Jun  4 07:33 pilot3
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas      6131 Jun  4 09:10 init_data.xml
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas 181270842 Jun  4 09:17 HITS.45006595._054648.pool.root.1
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas       529 Jun  4 09:17 boinc_task_state.xml
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas        95 Jun  4 09:17 pilot_heartbeat.json
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas      1049 Jun  4 09:17 memory_monitor_summary.json
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas    335711 Jun  4 09:17 log.45006595._054648.job.log.tgz.1
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas      7744 Jun  4 09:18 heartbeat.json
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:18 boinc_mmap_file
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas        27 Jun  4 09:18 wrapper_checkpoint.txt
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas      4425 Jun  4 09:18 pilotlog.txt
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas    600401 Jun  4 09:18 log.45006595._054648.job.log.1
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas       357 Jun  4 09:18 output.list
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:18 runtime_log
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas    952320 Jun  4 09:18 result.tar.gz
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 09:18 runtime_log.err
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas       656 Jun  4 09:18 9zsLDmh6wg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmganKDm4XVl3n.diag
[2025-06-04 09:18:25] -rw-r--r-- 1 boincer umatlas     21007 Jun  4 09:18 stderr.txt
[2025-06-04 09:18:25] HITS file was successfully produced:
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas 181270842 Jun  4 09:17 shared/HITS.pool.root.1
[2025-06-04 09:18:25]  *** Contents of shared directory: ***
[2025-06-04 09:18:25] total 387704
[2025-06-04 09:18:25] -rw-r--r-- 2 boincer umatlas 214248470 Jun  4 07:32 ATLAS.root_0
[2025-06-04 09:18:25] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:32 start_atlas.sh
[2025-06-04 09:18:25] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 07:32 input.tar.gz
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas 181270842 Jun  4 09:17 HITS.pool.root.1
[2025-06-04 09:18:25] -rw------- 1 boincer umatlas    952320 Jun  4 09:18 result.tar.gz
09:18:26 (45585): run_atlas exited; CPU time 46119.629162
09:18:26 (45585): called boinc_finish(0)

</stderr_txt>
]]>

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