Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:23:40 (2466990): wrapper (7.7.26015): starting
08:23:40 (2466990): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:23:40] Arguments: --nthreads 12
[2025-06-04 08:23:40] Threads: 12
[2025-06-04 08:23:40] Checking for CVMFS
[2025-06-04 08:23:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:23:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:23:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:23:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:23:41] 2.12.6.0 5616 816 113864 146780 0 183 25192056 32935936 5796 16776704 0 5145467 99.612 3785798 33252 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:23:41] CVMFS is ok
[2025-06-04 08:23:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:23:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:23:41] Further information can be found at the LHC@home message board.
[2025-06-04 08:23:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:23:41] Checking for apptainer binary...
[2025-06-04 08:23:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:23:41] Running /usr/bin/apptainer --version
[2025-06-04 08:23:41] apptainer version 1.4.1-1.el9
[2025-06-04 08:23:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:23:41] c6-1-24-1.aglt2.org
[2025-06-04 08:23:41] apptainer works
[2025-06-04 08:23:41] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:23:41] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:23:41] Starting ATLAS job with PandaID=6678390196
[2025-06-04 08:23:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:16:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:16:40]  guid=4688fd4c-49f6-4d98-9c4c-6e397d50d4ec
[2025-06-04 09:16:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:16:40]  is_altstaged=None
[2025-06-04 09:16:40]  is_tar=False
[2025-06-04 09:16:40]  lfn=log.45006595._054647.job.log.tgz.1
[2025-06-04 09:16:40]  mtime=0
[2025-06-04 09:16:40]  protocol_id=None
[2025-06-04 09:16:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:16:40]  replicas=None
[2025-06-04 09:16:40]  scope=mc23_13p6TeV
[2025-06-04 09:16:40]  status=None
[2025-06-04 09:16:40]  status_code=0
[2025-06-04 09:16:40]  storage_token=
[2025-06-04 09:16:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678390196/log.45006595._054647.job.log.tgz.1
[2025-06-04 09:16:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/e1/log.45006595._054647.job.log.tgz.1
[2025-06-04 09:16:40]  workdir=None
[2025-06-04 09:16:40] ]
[2025-06-04 09:16:40] 2025-06-04 13:16:16,094 | INFO     | transferring file log.45006595._054647.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678390196/log.45006595._054647.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:16:40] 2025-06-04 13:16:16,094 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678390196/log.45006595._054647.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054647.job
[2025-06-04 09:16:40] 2025-06-04 13:16:16,108 | INFO     | adding to output.list: log.45006595._054647.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/e1/log.45006595._054647.job.log.tg
[2025-06-04 09:16:40] 2025-06-04 13:16:16,109 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:16:40] 2025-06-04 13:16:16,109 | INFO     | summary of transferred files:
[2025-06-04 09:16:40] 2025-06-04 13:16:16,109 | INFO     |  -- lfn=log.45006595._054647.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:16:40] 2025-06-04 13:16:16,109 | INFO     | stage-out finished correctly
[2025-06-04 09:16:40] 2025-06-04 13:16:16,257 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:16:40] 2025-06-04 13:16:17,722 | INFO     | job 6678390196 has state=finished
[2025-06-04 09:16:40] 2025-06-04 13:16:17,723 | INFO     | preparing for final server update for job 6678390196 in state='finished'
[2025-06-04 09:16:40] 2025-06-04 13:16:17,723 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:16:40] 2025-06-04 13:16:17,723 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:16:40] 2025-06-04 13:16:17,723 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:16:40] 2025-06-04 13:16:17,723 | INFO     | job 6678390196 has finished - writing final server update
[2025-06-04 09:16:40] 2025-06-04 13:16:17,724 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:16:40] 2025-06-04 13:16:17,740 | INFO     | executing command: lscpu
[2025-06-04 09:16:40] 2025-06-04 13:16:17,806 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:16:40] 2025-06-04 13:16:18,241 | INFO     | monitor loop #240: job 0:6678390196 is in state 'finished'
[2025-06-04 09:16:40] 2025-06-04 13:16:18,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:16:40] 2025-06-04 13:16:20,744 | INFO     | monitor loop #241: job 0:6678390196 is in state 'finished'
[2025-06-04 09:16:40] 2025-06-04 13:16:20,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:16:40] 2025-06-04 13:16:21,735 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:16:40] 2025-06-04 13:16:21,735 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678390196/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:16:40] 2025-06-04 13:16:21,736 | INFO     | extracted standard info from prmon json
[2025-06-04 09:16:40] 2025-06-04 13:16:21,737 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:16:40] 2025-06-04 13:16:21,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:16:40] 2025-06-04 13:16:21,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:16:40] 2025-06-04 13:16:21,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:16:40] 2025-06-04 13:16:21,739 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:16:40] 2025-06-04 13:16:21,739 | INFO     | sum of square deviations: 28242390.0
[2025-06-04 09:16:40] 2025-06-04 13:16:21,739 | INFO     | sum of deviations: 7471125548.0
[2025-06-04 09:16:40] 2025-06-04 13:16:21,740 | INFO     | mean x: 1749041504.0
[2025-06-04 09:16:40] 2025-06-04 13:16:21,740 | INFO     | mean y: 2677449.3777777776
[2025-06-04 09:16:40] 2025-06-04 13:16:21,740 | INFO     | -- intersect: -462681559438.74475
[2025-06-04 09:16:40] 2025-06-04 13:16:21,740 | INFO     | intersect: -462681559438.74475
[2025-06-04 09:16:40] 2025-06-04 13:16:21,740 | INFO     | chi2: 0.7073291644236865
[2025-06-04 09:16:40] 2025-06-04 13:16:21,740 | INFO     | -- intersect: -462681559438.74475
[2025-06-04 09:16:40] 2025-06-04 13:16:21,740 | INFO     | current memory leak: 264.54 B/s (using 45 data points, chi2=0.71)
[2025-06-04 09:16:40] 2025-06-04 13:16:21,741 | INFO     | ..............................
[2025-06-04 09:16:40] 2025-06-04 13:16:21,741 | INFO     | . Timing measurements:
[2025-06-04 09:16:40] 2025-06-04 13:16:21,742 | INFO     | . get job = 0 s
[2025-06-04 09:16:40] 2025-06-04 13:16:21,742 | INFO     | . initial setup = 2 s
[2025-06-04 09:16:40] 2025-06-04 13:16:21,742 | INFO     | . payload setup = 7 s
[2025-06-04 09:16:40] 2025-06-04 13:16:21,742 | INFO     | . stage-in = 0 s
[2025-06-04 09:16:40] 2025-06-04 13:16:21,742 | INFO     | . payload execution = 3118 s
[2025-06-04 09:16:40] 2025-06-04 13:16:21,742 | INFO     | . stage-out = 0 s
[2025-06-04 09:16:40] 2025-06-04 13:16:21,742 | INFO     | . log creation = 0 s
[2025-06-04 09:16:40] 2025-06-04 13:16:21,742 | INFO     | ..............................
[2025-06-04 09:16:40] 2025-06-04 13:16:21,829 | INFO     | 
[2025-06-04 09:16:40] 2025-06-04 13:16:21,830 | INFO     | job summary report
[2025-06-04 09:16:40] 2025-06-04 13:16:21,830 | INFO     | --------------------------------------------------
[2025-06-04 09:16:40] 2025-06-04 13:16:21,830 | INFO     | PanDA job id: 6678390196
[2025-06-04 09:16:40] 2025-06-04 13:16:21,830 | INFO     | task id: 45006595
[2025-06-04 09:16:40] 2025-06-04 13:16:21,830 | INFO     | errors: (none)
[2025-06-04 09:16:40] 2025-06-04 13:16:21,831 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:16:40] 2025-06-04 13:16:21,831 | INFO     | pilot state: finished 
[2025-06-04 09:16:40] 2025-06-04 13:16:21,831 | INFO     | transexitcode: 0
[2025-06-04 09:16:40] 2025-06-04 13:16:21,831 | INFO     | exeerrorcode: 0
[2025-06-04 09:16:40] 2025-06-04 13:16:21,831 | INFO     | exeerrordiag: 
[2025-06-04 09:16:40] 2025-06-04 13:16:21,831 | INFO     | exitcode: 0
[2025-06-04 09:16:40] 2025-06-04 13:16:21,831 | INFO     | exitmsg: OK
[2025-06-04 09:16:40] 2025-06-04 13:16:21,831 | INFO     | cpuconsumptiontime: 29820 s
[2025-06-04 09:16:40] 2025-06-04 13:16:21,831 | INFO     | nevents: 400
[2025-06-04 09:16:40] 2025-06-04 13:16:21,831 | INFO     | neventsw: 0
[2025-06-04 09:16:40] 2025-06-04 13:16:21,832 | INFO     | pid: 2477629
[2025-06-04 09:16:40] 2025-06-04 13:16:21,832 | INFO     | pgrp: 2477629
[2025-06-04 09:16:40] 2025-06-04 13:16:21,832 | INFO     | corecount: 12
[2025-06-04 09:16:40] 2025-06-04 13:16:21,832 | INFO     | event service: False
[2025-06-04 09:16:40] 2025-06-04 13:16:21,832 | INFO     | sizes: {0: 2397170, 1: 2397369, 5: 2397575, 11: 2397631, 3129: 2423019, 3130: 2432144, 3136: 2432258}
[2025-06-04 09:16:40] 2025-06-04 13:16:21,832 | INFO     | --------------------------------------------------
[2025-06-04 09:16:40] 2025-06-04 13:16:21,832 | INFO     | 
[2025-06-04 09:16:40] 2025-06-04 13:16:21,832 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:16:40] 2025-06-04 13:16:21,851 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,851 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,852 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,852 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,852 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,852 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,852 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,852 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,852 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,853 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,853 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,853 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,853 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,853 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,853 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,853 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:16:40] 2025-06-04 13:16:21,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,854 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:16:40] 2025-06-04 13:16:21,854 | INFO     | job 6678390196 has completed (purged errors)
[2025-06-04 09:16:40] 2025-06-04 13:16:21,854 | INFO     | overall cleanup function is called
[2025-06-04 09:16:40] 2025-06-04 13:16:21,909 | INFO     | PID=2470698 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 09:16:40] 2025-06-04 13:16:21,909 | INFO     | .. there are 8 such processes running
[2025-06-04 09:16:40] 2025-06-04 13:16:22,863 | INFO     | --- collectZombieJob: --- 10, [2477629]
[2025-06-04 09:16:40] 2025-06-04 13:16:22,863 | INFO     | zombie collector waiting for pid 2477629
[2025-06-04 09:16:40] 2025-06-04 13:16:22,864 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:16:40] 2025-06-04 13:16:22,864 | INFO     | collected zombie processes
[2025-06-04 09:16:40] 2025-06-04 13:16:22,864 | INFO     | will attempt to kill all subprocesses of pid=2477629
[2025-06-04 09:16:40] 2025-06-04 13:16:23,096 | INFO     | process IDs to be killed: [2477629] (in reverse order)
[2025-06-04 09:16:40] 2025-06-04 13:16:23,171 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:16:40] 2025-06-04 13:16:23,171 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:16:40] 2025-06-04 13:16:23,180 | INFO     | did not find any defunct processes belonging to 2477629
[2025-06-04 09:16:40] 2025-06-04 13:16:23,189 | INFO     | did not find any defunct processes belonging to 2477629
[2025-06-04 09:16:40] 2025-06-04 13:16:23,189 | INFO     | ready for new job
[2025-06-04 09:16:40] 2025-06-04 13:16:23,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:16:40] 2025-06-04 13:16:23,191 | INFO     | **************************************
[2025-06-04 09:16:40] 2025-06-04 13:16:23,191 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:16:40] 2025-06-04 13:16:23,191 | INFO     | **************************************
[2025-06-04 09:16:40] 2025-06-04 13:16:23,192 | INFO     | 
[2025-06-04 09:16:40] 2025-06-04 13:16:23,207 | INFO     | architecture information:
[2025-06-04 09:16:40] 2025-06-04 13:16:23,208 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:16:40] 2025-06-04 13:16:23,224 | INFO     | cat /etc/os-release:
[2025-06-04 09:16:40] NAME="CentOS Linux"
[2025-06-04 09:16:40] VERSION="7 (Core)"
[2025-06-04 09:16:40] ID="centos"
[2025-06-04 09:16:40] ID_LIKE="rhel fedora"
[2025-06-04 09:16:40] VERSION_ID="7"
[2025-06-04 09:16:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:16:40] ANSI_COLOR="0;31"
[2025-06-04 09:16:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:16:40] HOME_URL="https://www.centos.org/"
[2025-06-04 09:16:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:16:40] 
[2025-06-04 09:16:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:16:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:16:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:16:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:16:40] 
[2025-06-04 09:16:40] 2025-06-04 13:16:23,225 | INFO     | **************************************
[2025-06-04 09:16:40] 2025-06-04 13:16:23,728 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:16:40] 2025-06-04 13:16:23,748 | INFO     | sufficient remaining disk space (76298584064 B)
[2025-06-04 09:16:40] 2025-06-04 13:16:23,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:16:40] 2025-06-04 13:16:23,748 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:16:40] 2025-06-04 13:16:23,748 | INFO     | update_server=False
[2025-06-04 09:16:40] 2025-06-04 13:16:23,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:16:40] 2025-06-04 13:16:23,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:16:40] 2025-06-04 13:16:23,754 | INFO     | all job control threads have been joined
[2025-06-04 09:16:40] 2025-06-04 13:16:23,915 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:16:40] 2025-06-04 13:16:23,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:16:40] 2025-06-04 13:16:23,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:16:40] 2025-06-04 13:16:23,988 | INFO     | all data control threads have been joined
[2025-06-04 09:16:40] 2025-06-04 13:16:24,153 | INFO     | all payload control threads have been joined
[2025-06-04 09:16:40] 2025-06-04 13:16:24,170 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:16:40] 2025-06-04 13:16:24,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:16:40] 2025-06-04 13:16:24,257 | INFO     | aborting loop
[2025-06-04 09:16:40] 2025-06-04 13:16:24,750 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:24,753 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:24,759 | INFO     | [job] control thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:24,813 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:24,994 | INFO     | [data] control thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:25,158 | INFO     | [payload] control thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:25,229 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:25,262 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:25,841 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:25,853 | INFO     | [job] validate thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:25,901 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:26,175 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:26,208 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:26,335 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:26,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:16:40] 2025-06-04 13:16:30,857 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:33,993 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:16:40] 2025-06-04 13:16:34,993 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:16:40] 2025-06-04 13:16:35,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139937363756864)>', '<ExcThread(monitor, started 139936720209664)>']
[2025-06-04 09:16:40] 2025-06-04 13:16:35,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:16:40] 2025-06-04 13:16:35,974 | INFO     | [monitor] control thread has ended
[2025-06-04 09:16:40] 2025-06-04 13:16:40,190 | INFO     | all workflow threads have been joined
[2025-06-04 09:16:40] 2025-06-04 13:16:40,190 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:16:40] 2025-06-04 13:16:40,191 | INFO     | traces error code: 0
[2025-06-04 09:16:40] 2025-06-04 13:16:40,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:16:40] 2025-06-04 13:16:40,334 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:16:40] 2025-06-04 13:16:40,337 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:16:40] 2025-06-04 13:16:40,340 [wrapper] pilotpid: 2470698
[2025-06-04 09:16:40] 2025-06-04 13:16:40,342 [wrapper] Pilot exit status: 0
[2025-06-04 09:16:40] 2025-06-04 13:16:40,352 [wrapper] pandaids: 6678390196
[2025-06-04 09:16:40] 2025-06-04 13:16:40,402 [wrapper] cleanup supervisor_pilot 2606481 2470699
[2025-06-04 09:16:40] 2025-06-04 13:16:40,405 [wrapper] Test setup, not cleaning
[2025-06-04 09:16:40] 2025-06-04 13:16:40,407 [wrapper] apfmon messages muted
[2025-06-04 09:16:40] 2025-06-04 13:16:40,410 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:16:40] 2025-06-04 13:16:40,414 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:16:40]  *** Error codes and diagnostics ***
[2025-06-04 09:16:40]     "exeErrorCode": 0,
[2025-06-04 09:16:40]     "exeErrorDiag": "",
[2025-06-04 09:16:40]     "pilotErrorCode": 0,
[2025-06-04 09:16:40]     "pilotErrorDiag": "",
[2025-06-04 09:16:40]  *** Listing of results directory ***
[2025-06-04 09:16:40] total 389424
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:48 queuedata.json
[2025-06-04 09:16:40] -rwx------. 1 boincer umatlas     37140 Jun  4 02:48 runpilot2-wrapper.sh
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:16:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:23 run_atlas
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:23 job.xml
[2025-06-04 09:16:40] -rw-r--r--. 2 boincer umatlas 214248470 Jun  4 08:23 EVNT.45006593._002186.pool.root.1
[2025-06-04 09:16:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:23 start_atlas.sh
[2025-06-04 09:16:40] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:23 shared
[2025-06-04 09:16:40] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 08:23 input.tar.gz
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:23 boinc_lockfile
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 08:23 pandaJob.out
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas    986811 Jun  4 08:23 agis_schedconf.cvmfs.json
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:23 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:16:40] drwx------. 4 boincer umatlas      4096 Jun  4 08:23 pilot3
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 09:13 init_data.xml
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas        95 Jun  4 09:15 pilot_heartbeat.json
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas 179300693 Jun  4 09:15 HITS.45006595._054647.pool.root.1
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:15 boinc_task_state.xml
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas      1034 Jun  4 09:16 memory_monitor_summary.json
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas    364953 Jun  4 09:16 log.45006595._054647.job.log.tgz.1
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas      7715 Jun  4 09:16 heartbeat.json
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:16 boinc_mmap_file
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:16 wrapper_checkpoint.txt
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas      4425 Jun  4 09:16 pilotlog.txt
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas    329660 Jun  4 09:16 log.45006595._054647.job.log.1
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas       357 Jun  4 09:16 output.list
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:16 runtime_log
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas    716800 Jun  4 09:16 result.tar.gz
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 09:16 runtime_log.err
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas       652 Jun  4 09:16 MsrLDmh6wg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfanKDm8Gf4pm.diag
[2025-06-04 09:16:40] -rw-r--r--. 1 boincer umatlas     21343 Jun  4 09:16 stderr.txt
[2025-06-04 09:16:40] HITS file was successfully produced:
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas 179300693 Jun  4 09:15 shared/HITS.pool.root.1
[2025-06-04 09:16:40]  *** Contents of shared directory: ***
[2025-06-04 09:16:40] total 385548
[2025-06-04 09:16:40] -rw-r--r--. 2 boincer umatlas 214248470 Jun  4 08:23 ATLAS.root_0
[2025-06-04 09:16:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:23 start_atlas.sh
[2025-06-04 09:16:40] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 08:23 input.tar.gz
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas 179300693 Jun  4 09:15 HITS.pool.root.1
[2025-06-04 09:16:40] -rw-------. 1 boincer umatlas    716800 Jun  4 09:16 result.tar.gz
09:16:42 (2466990): run_atlas exited; CPU time 29861.608609
09:16:42 (2466990): called boinc_finish(0)

</stderr_txt>
]]>

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