Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:42:02 (7944): wrapper (7.7.26015): starting
22:42:02 (7944): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:42:02] Arguments: --nthreads 8
[2025-06-04 22:42:02] Threads: 8
[2025-06-04 22:42:02] Checking for CVMFS
[2025-06-04 22:42:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:42:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:42:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:42:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:42:03] 2.11.2.0 27076 33717 93620 146793 1 209 18929220 25165825 3710 130560 0 17435523 99.813 19762065 2161 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 22:42:03] CVMFS is ok
[2025-06-04 22:42:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:42:03] Checking for apptainer binary...
[2025-06-04 22:42:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:42:03] Running /usr/bin/apptainer --version
[2025-06-04 22:42:03] apptainer version 1.3.2-1.el7
[2025-06-04 22:42:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:42:05] cg-vwn399.simple-grid.lan
[2025-06-04 22:42:05] apptainer works
[2025-06-04 22:42:05] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:42:05] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:42:05] Starting ATLAS job with PandaID=6678364774
[2025-06-04 22:42:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:14:43]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:14:43] 2025-06-05 00:19:39,591 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6678364774/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:14:43] 2025-06-05 00:19:39,592 | INFO     | extracted standard info from prmon json
[2025-06-05 03:14:43] 2025-06-05 00:19:39,592 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:14:43] 2025-06-05 00:19:39,592 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:14:43] 2025-06-05 00:19:39,592 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:14:43] 2025-06-05 00:19:39,592 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:14:43] 2025-06-05 00:19:39,597 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:14:43] 2025-06-05 00:19:39,598 | INFO     | sum of square deviations: 2912836010.0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,600 | INFO     | sum of deviations: -11598761796.0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,600 | INFO     | mean x: 1749076228.0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,600 | INFO     | mean y: 2477739.5355450236
[2025-06-05 03:14:43] 2025-06-05 00:19:39,600 | INFO     | -- intersect: 6967208490.5873995
[2025-06-05 03:14:43] 2025-06-05 00:19:39,601 | INFO     | intersect: 6967208490.5873995
[2025-06-05 03:14:43] 2025-06-05 00:19:39,601 | INFO     | chi2: 2.6248032451968353
[2025-06-05 03:14:43] 2025-06-05 00:19:39,602 | INFO     | sum of square deviations: 2710627567.5
[2025-06-05 03:14:43] 2025-06-05 00:19:39,603 | INFO     | sum of deviations: 2549652105.5000095
[2025-06-05 03:14:43] 2025-06-05 00:19:39,604 | INFO     | mean x: 1749076075.5
[2025-06-05 03:14:43] 2025-06-05 00:19:39,604 | INFO     | mean y: 2488208.7427184465
[2025-06-05 03:14:43] 2025-06-05 00:19:39,604 | INFO     | -- intersect: -1642715858.4066756
[2025-06-05 03:14:43] 2025-06-05 00:19:39,604 | INFO     | intersect: -1642715858.4066756
[2025-06-05 03:14:43] 2025-06-05 00:19:39,604 | INFO     | chi2: 1.856989898343441
[2025-06-05 03:14:43] 2025-06-05 00:19:39,605 | INFO     | current chi2=1.856989898343441 (change=29.252224838506535 %)
[2025-06-05 03:14:43] 2025-06-05 00:19:39,605 | INFO     | sum of square deviations: 2518000700.0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,607 | INFO     | sum of deviations: 2551089112.9999943
[2025-06-05 03:14:43] 2025-06-05 00:19:39,607 | INFO     | mean x: 1749075923.0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,607 | INFO     | mean y: 2488209.880597015
[2025-06-05 03:14:43] 2025-06-05 00:19:39,607 | INFO     | -- intersect: -1769571879.2908304
[2025-06-05 03:14:43] 2025-06-05 00:19:39,607 | INFO     | intersect: -1769571879.2908304
[2025-06-05 03:14:43] 2025-06-05 00:19:39,608 | INFO     | chi2: 1.8573803766237247
[2025-06-05 03:14:43] 2025-06-05 00:19:39,608 | INFO     | current chi2=1.8573803766237247 (change=-0.02102748542854462 %)
[2025-06-05 03:14:43] 2025-06-05 00:19:39,608 | INFO     | right removable region: 200
[2025-06-05 03:14:43] 2025-06-05 00:19:39,608 | INFO     | sum of square deviations: 2710627567.5
[2025-06-05 03:14:43] 2025-06-05 00:19:39,610 | INFO     | sum of deviations: -48094718671.0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,610 | INFO     | mean x: 1749076380.5
[2025-06-05 03:14:43] 2025-06-05 00:19:39,610 | INFO     | mean y: 2505016.4368932038
[2025-06-05 03:14:43] 2025-06-05 00:19:39,611 | INFO     | -- intersect: 31036401912.801445
[2025-06-05 03:14:43] 2025-06-05 00:19:39,611 | INFO     | intersect: 31036401912.801445
[2025-06-05 03:14:43] 2025-06-05 00:19:39,611 | INFO     | chi2: 0.9748233492083407
[2025-06-05 03:14:43] 2025-06-05 00:19:39,611 | INFO     | current chi2=0.9748233492083407 (change=62.861088693326494 %)
[2025-06-05 03:14:43] 2025-06-05 00:19:39,612 | INFO     | sum of square deviations: 2518000700.0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,613 | INFO     | sum of deviations: -43831417325.0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,613 | INFO     | mean x: 1749076533.0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,614 | INFO     | mean y: 2501609.278606965
[2025-06-05 03:14:43] 2025-06-05 00:19:39,614 | INFO     | -- intersect: 30449079106.769825
[2025-06-05 03:14:43] 2025-06-05 00:19:39,614 | INFO     | intersect: 30449079106.769825
[2025-06-05 03:14:43] 2025-06-05 00:19:39,614 | INFO     | chi2: 0.963625994446937
[2025-06-05 03:14:43] 2025-06-05 00:19:39,614 | INFO     | current chi2=0.963625994446937 (change=1.1486547558075155 %)
[2025-06-05 03:14:43] 2025-06-05 00:19:39,615 | INFO     | left removable region: 20
[2025-06-05 03:14:43] 2025-06-05 00:19:39,615 | INFO     | sum of square deviations: 1808350185.0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,616 | INFO     | sum of deviations: -15330242998.999998
[2025-06-05 03:14:43] 2025-06-05 00:19:39,617 | INFO     | mean x: 1749076502.5
[2025-06-05 03:14:43] 2025-06-05 00:19:39,617 | INFO     | mean y: 2501164.3333333335
[2025-06-05 03:14:43] 2025-06-05 00:19:39,617 | INFO     | -- intersect: 14830253017.697968
[2025-06-05 03:14:43] 2025-06-05 00:19:39,617 | INFO     | intersect: 14830253017.697968
[2025-06-05 03:14:43] 2025-06-05 00:19:39,617 | INFO     | chi2: 0.12130616739702844
[2025-06-05 03:14:43] 2025-06-05 00:19:39,618 | INFO     | -- intersect: 14830253017.697968
[2025-06-05 03:14:43] 2025-06-05 00:19:39,618 | INFO     | current memory leak: -8.48 B/s (using 180 data points, chi2=0.12)
[2025-06-05 03:14:43] 2025-06-05 00:19:39,619 | INFO     | ..............................
[2025-06-05 03:14:43] 2025-06-05 00:19:39,619 | INFO     | . Timing measurements:
[2025-06-05 03:14:43] 2025-06-05 00:19:39,619 | INFO     | . get job = 0 s
[2025-06-05 03:14:43] 2025-06-05 00:19:39,619 | INFO     | . initial setup = 4 s
[2025-06-05 03:14:43] 2025-06-05 00:19:39,619 | INFO     | . payload setup = 15 s
[2025-06-05 03:14:43] 2025-06-05 00:19:39,619 | INFO     | . stage-in = 0 s
[2025-06-05 03:14:43] 2025-06-05 00:19:39,619 | INFO     | . payload execution = 12877 s
[2025-06-05 03:14:43] 2025-06-05 00:19:39,619 | INFO     | . stage-out = 4 s
[2025-06-05 03:14:43] 2025-06-05 00:19:39,619 | INFO     | . log creation = 1 s
[2025-06-05 03:14:43] 2025-06-05 00:19:39,619 | INFO     | ..............................
[2025-06-05 03:14:43] 2025-06-05 00:19:39,791 | INFO     | 
[2025-06-05 03:14:43] 2025-06-05 00:19:39,791 | INFO     | job summary report
[2025-06-05 03:14:43] 2025-06-05 00:19:39,792 | INFO     | --------------------------------------------------
[2025-06-05 03:14:43] 2025-06-05 00:19:39,792 | INFO     | PanDA job id: 6678364774
[2025-06-05 03:14:43] 2025-06-05 00:19:39,792 | INFO     | task id: 45006595
[2025-06-05 03:14:43] 2025-06-05 00:19:39,792 | INFO     | errors: (none)
[2025-06-05 03:14:43] 2025-06-05 00:19:39,792 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:14:43] 2025-06-05 00:19:39,792 | INFO     | pilot state: finished 
[2025-06-05 03:14:43] 2025-06-05 00:19:39,792 | INFO     | transexitcode: 0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,792 | INFO     | exeerrorcode: 0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,792 | INFO     | exeerrordiag: 
[2025-06-05 03:14:43] 2025-06-05 00:19:39,792 | INFO     | exitcode: 0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,792 | INFO     | exitmsg: OK
[2025-06-05 03:14:43] 2025-06-05 00:19:39,793 | INFO     | cpuconsumptiontime: 48582 s
[2025-06-05 03:14:43] 2025-06-05 00:19:39,793 | INFO     | nevents: 400
[2025-06-05 03:14:43] 2025-06-05 00:19:39,793 | INFO     | neventsw: 0
[2025-06-05 03:14:43] 2025-06-05 00:19:39,793 | INFO     | pid: 25196
[2025-06-05 03:14:43] 2025-06-05 00:19:39,793 | INFO     | pgrp: 25196
[2025-06-05 03:14:43] 2025-06-05 00:19:39,793 | INFO     | corecount: 8
[2025-06-05 03:14:43] 2025-06-05 00:19:39,793 | INFO     | event service: False
[2025-06-05 03:14:43] 2025-06-05 00:19:39,793 | INFO     | sizes: {0: 2397342, 1: 2397342, 12: 2397370, 19: 2397604, 22: 2397632, 12896: 2426963, 12902: 2435904, 12905: 2435960, 12994: 2436130}
[2025-06-05 03:14:43] 2025-06-05 00:19:39,793 | INFO     | --------------------------------------------------
[2025-06-05 03:14:43] 2025-06-05 00:19:39,793 | INFO     | 
[2025-06-05 03:14:43] 2025-06-05 00:19:39,794 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-05 03:14:43] 2025-06-05 00:19:40,233 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,233 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,233 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,233 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,234 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,235 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,235 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:14:43] 2025-06-05 00:19:40,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,235 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:14:43] 2025-06-05 00:19:40,235 | INFO     | job 6678364774 has completed (purged errors)
[2025-06-05 03:14:43] 2025-06-05 00:19:40,235 | INFO     | overall cleanup function is called
[2025-06-05 03:14:43] 2025-06-05 00:19:41,251 | INFO     | --- collectZombieJob: --- 10, [25196]
[2025-06-05 03:14:43] 2025-06-05 00:19:41,251 | INFO     | zombie collector waiting for pid 25196
[2025-06-05 03:14:43] 2025-06-05 00:19:41,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:14:43] 2025-06-05 00:19:41,252 | INFO     | collected zombie processes
[2025-06-05 03:14:43] 2025-06-05 00:19:41,252 | INFO     | will attempt to kill all subprocesses of pid=25196
[2025-06-05 03:14:43] 2025-06-05 00:19:41,371 | INFO     | process IDs to be killed: [25196] (in reverse order)
[2025-06-05 03:14:43] 2025-06-05 00:19:42,215 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:14:43] 2025-06-05 00:19:42,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:14:43] 2025-06-05 00:19:42,218 | INFO     | did not find any defunct processes belonging to 25196
[2025-06-05 03:14:43] 2025-06-05 00:19:42,221 | INFO     | did not find any defunct processes belonging to 25196
[2025-06-05 03:14:43] 2025-06-05 00:19:42,222 | INFO     | ready for new job
[2025-06-05 03:14:43] 2025-06-05 00:19:42,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:14:43] 2025-06-05 00:19:42,224 | INFO     | **************************************
[2025-06-05 03:14:43] 2025-06-05 00:19:42,224 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:14:43] 2025-06-05 00:19:42,224 | INFO     | **************************************
[2025-06-05 03:14:43] 2025-06-05 00:19:42,224 | INFO     | 
[2025-06-05 03:14:43] 2025-06-05 00:19:42,225 | INFO     | pilot is running in a VM
[2025-06-05 03:14:43] 2025-06-05 00:19:42,225 | INFO     | architecture information:
[2025-06-05 03:14:43] 2025-06-05 00:19:42,233 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:14:43] 2025-06-05 00:19:42,460 | INFO     | cat /etc/os-release:
[2025-06-05 03:14:43] NAME="CentOS Linux"
[2025-06-05 03:14:43] VERSION="7 (Core)"
[2025-06-05 03:14:43] ID="centos"
[2025-06-05 03:14:43] ID_LIKE="rhel fedora"
[2025-06-05 03:14:43] VERSION_ID="7"
[2025-06-05 03:14:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:14:43] ANSI_COLOR="0;31"
[2025-06-05 03:14:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:14:43] HOME_URL="https://www.centos.org/"
[2025-06-05 03:14:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:14:43] 
[2025-06-05 03:14:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:14:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:14:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:14:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:14:43] 
[2025-06-05 03:14:43] 2025-06-05 00:19:42,460 | INFO     | **************************************
[2025-06-05 03:14:43] 2025-06-05 00:19:42,963 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-05 03:14:43] 2025-06-05 00:19:43,104 | INFO     | sufficient remaining disk space (496976789504 B)
[2025-06-05 03:14:43] 2025-06-05 00:19:43,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:14:43] 2025-06-05 00:19:43,105 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:14:43] 2025-06-05 00:19:43,105 | INFO     | update_server=False
[2025-06-05 03:14:43] 2025-06-05 00:19:43,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:14:43] 2025-06-05 00:19:43,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:14:43] 2025-06-05 00:19:43,111 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:14:43] 2025-06-05 00:19:43,111 | INFO     | aborting loop
[2025-06-05 03:14:43] 2025-06-05 00:19:43,178 | INFO     | all data control threads have been joined
[2025-06-05 03:14:43] 2025-06-05 00:19:43,317 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:14:43] 2025-06-05 00:19:43,317 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:14:43] 2025-06-05 00:19:43,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:14:43] 2025-06-05 00:19:43,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:14:43] 2025-06-05 00:19:44,023 | INFO     | all payload control threads have been joined
[2025-06-05 03:14:43] 2025-06-05 00:19:44,111 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:44,117 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:44,184 | INFO     | [data] control thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:44,241 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:44,279 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:44,412 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:44,478 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:44,636 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:44,736 | INFO     | all job control threads have been joined
[2025-06-05 03:14:43] 2025-06-05 00:19:44,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:14:43] 2025-06-05 00:19:45,029 | INFO     | [payload] control thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:45,252 | INFO     | [job] validate thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:45,253 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:45,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:45,466 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:45,742 | INFO     | [job] control thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:45,814 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:47,115 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:14:43] 2025-06-05 00:19:47,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172245690176)>', '<ExcThread(monitor, started 140171785774848)>']
[2025-06-05 03:14:43] 2025-06-05 00:19:48,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:14:43] 2025-06-05 00:19:48,347 | INFO     | [monitor] control thread has ended
[2025-06-05 03:14:43] 2025-06-05 00:19:52,992 | INFO     | all workflow threads have been joined
[2025-06-05 03:14:43] 2025-06-05 00:19:52,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:14:43] 2025-06-05 00:19:52,993 | INFO     | traces error code: 0
[2025-06-05 03:14:43] 2025-06-05 00:19:52,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:14:43] 2025-06-05 00:19:53,377 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:14:43] 2025-06-05 00:19:53,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:14:43] 2025-06-05 00:19:53,560 [wrapper] pilotpid: 15162
[2025-06-05 03:14:43] 2025-06-05 00:19:53,614 [wrapper] Pilot exit status: 0
[2025-06-05 03:14:43] 2025-06-05 00:19:54,039 [wrapper] pandaids: 6678364774
[2025-06-05 03:14:43] 2025-06-05 00:19:55,067 [wrapper] cleanup supervisor_pilot 21006 15163
[2025-06-05 03:14:43] 2025-06-05 00:19:55,111 [wrapper] Test setup, not cleaning
[2025-06-05 03:14:43] 2025-06-05 00:19:55,155 [wrapper] apfmon messages muted
[2025-06-05 03:14:43] 2025-06-05 00:19:55,211 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:14:43] 2025-06-05 00:19:55,283 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:14:43]  *** Error codes and diagnostics ***
[2025-06-05 03:14:43]     "exeErrorCode": 0,
[2025-06-05 03:14:43]     "exeErrorDiag": "",
[2025-06-05 03:14:43]     "pilotErrorCode": 0,
[2025-06-05 03:14:43]     "pilotErrorDiag": "",
[2025-06-05 03:14:43]  *** Listing of results directory ***
[2025-06-05 03:14:43] total 382648
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-05 03:14:43] -rwx------. 1 boinc boinc     37140 Jun  4 08:31 runpilot2-wrapper.sh
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc      5111 Jun  4 08:31 queuedata.json
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc       100 Jun  4 22:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:14:43] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 22:42 run_atlas
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc       105 Jun  4 22:42 job.xml
[2025-06-05 03:14:43] -rw-r--r--. 2 boinc boinc 213693393 Jun  4 22:42 EVNT.45006593._002171.pool.root.1
[2025-06-05 03:14:43] -rw-r--r--. 2 boinc boinc     15093 Jun  4 22:42 start_atlas.sh
[2025-06-05 03:14:43] drwxrwx--x. 2 boinc boinc        68 Jun  4 22:42 shared
[2025-06-05 03:14:43] -rw-r--r--. 2 boinc boinc    508880 Jun  4 22:42 input.tar.gz
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc      6392 Jun  4 22:42 init_data.xml
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc         0 Jun  4 22:42 boinc_lockfile
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc      2525 Jun  4 22:42 pandaJob.out
[2025-06-05 03:14:43] -rw-------. 1 boinc boinc    987032 Jun  4 22:42 agis_schedconf.cvmfs.json
[2025-06-05 03:14:43] drwx------. 4 boinc boinc      4096 Jun  4 22:42 pilot3
[2025-06-05 03:14:43] -rw-------. 1 boinc boinc 171282937 Jun  5 02:16 HITS.45006595._054258.pool.root.1
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc       531 Jun  5 02:16 boinc_task_state.xml
[2025-06-05 03:14:43] -rw-------. 1 boinc boinc      1017 Jun  5 02:17 memory_monitor_summary.json
[2025-06-05 03:14:43] -rw-------. 1 boinc boinc   1598969 Jun  5 02:18 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:14:43] -rw-------. 1 boinc boinc    391813 Jun  5 02:18 log.45006595._054258.job.log.tgz.1
[2025-06-05 03:14:43] -rw-------. 1 boinc boinc      7686 Jun  5 02:19 heartbeat.json
[2025-06-05 03:14:43] -rw-------. 1 boinc boinc        95 Jun  5 02:19 pilot_heartbeat.json
[2025-06-05 03:14:43] -rw-------. 1 boinc boinc      4416 Jun  5 02:19 pilotlog.txt
[2025-06-05 03:14:43] -rw-------. 1 boinc boinc   1129751 Jun  5 02:19 log.45006595._054258.job.log.1
[2025-06-05 03:14:43] -rw-------. 1 boinc boinc       357 Jun  5 02:19 output.list
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc       620 Jun  5 02:19 runtime_log
[2025-06-05 03:14:43] -rw-------. 1 boinc boinc   1536000 Jun  5 02:19 result.tar.gz
[2025-06-05 03:14:43] -rw-------. 1 boinc boinc       656 Jun  5 02:19 S3lKDm6pwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmyraKDmerwjHm.diag
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc      8659 Jun  5 02:19 runtime_log.err
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc      8192 Jun  5 03:14 boinc_mmap_file
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc        28 Jun  5 03:14 wrapper_checkpoint.txt
[2025-06-05 03:14:43] -rw-r--r--. 1 boinc boinc     20508 Jun  5 03:14 stderr.txt
[2025-06-05 03:14:44] HITS file was successfully produced:
[2025-06-05 03:14:44] -rw-------. 1 boinc boinc 171282937 Jun  5 02:16 shared/HITS.pool.root.1
[2025-06-05 03:14:44]  *** Contents of shared directory: ***
[2025-06-05 03:14:44] total 377976
[2025-06-05 03:14:44] -rw-r--r--. 2 boinc boinc 213693393 Jun  4 22:42 ATLAS.root_0
[2025-06-05 03:14:44] -rw-r--r--. 2 boinc boinc     15093 Jun  4 22:42 start_atlas.sh
[2025-06-05 03:14:44] -rw-r--r--. 2 boinc boinc    508880 Jun  4 22:42 input.tar.gz
[2025-06-05 03:14:44] -rw-------. 1 boinc boinc 171282937 Jun  5 02:16 HITS.pool.root.1
[2025-06-05 03:14:44] -rw-------. 1 boinc boinc   1536000 Jun  5 02:19 result.tar.gz
03:14:45 (7944): run_atlas exited; CPU time 48755.075545
03:14:45 (7944): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN