Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:36:44 (107629): wrapper (7.7.26015): starting
07:36:44 (107629): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:36:44] Arguments: --nthreads 8
[2025-06-04 07:36:44] Threads: 8
[2025-06-04 07:36:44] Checking for CVMFS
[2025-06-04 07:36:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:36:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:36:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:36:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:36:44] 2.12.6.0 5013 37260 645240 146779 0 146 31815111 32935936 11325 16776704 1 532020053 99.687 415282720 36145 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:36:44] CVMFS is ok
[2025-06-04 07:36:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:36:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:36:44] Further information can be found at the LHC@home message board.
[2025-06-04 07:36:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:36:44] Checking for apptainer binary...
[2025-06-04 07:36:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:36:44] Running /usr/bin/apptainer --version
[2025-06-04 07:36:44] apptainer version 1.4.1-1.el9
[2025-06-04 07:36:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:36:44] c7-9-15.aglt2.org
[2025-06-04 07:36:44] apptainer works
[2025-06-04 07:36:44] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:36:44] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:36:44] Starting ATLAS job with PandaID=6678364758
[2025-06-04 07:36:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:13:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:13:31]  filetype=log
[2025-06-04 08:13:31]  guid=1d0b86ee-ad5f-4143-b4b2-96422ac67f76
[2025-06-04 08:13:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:13:31]  is_altstaged=None
[2025-06-04 08:13:31]  is_tar=False
[2025-06-04 08:13:31]  lfn=log.45006595._054242.job.log.tgz.1
[2025-06-04 08:13:31]  mtime=0
[2025-06-04 08:13:31]  protocol_id=None
[2025-06-04 08:13:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:13:31]  replicas=None
[2025-06-04 08:13:31]  scope=mc23_13p6TeV
[2025-06-04 08:13:31]  status=None
[2025-06-04 08:13:31]  status_code=0
[2025-06-04 08:13:31]  storage_token=
[2025-06-04 08:13:31]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678364758/log.45006595._054242.job.log.tgz.1
[2025-06-04 08:13:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/92/log.45006595._054242.job.log.tgz.1
[2025-06-04 08:13:31]  workdir=None
[2025-06-04 08:13:31] ]
[2025-06-04 08:13:31] 2025-06-04 12:13:07,448 | INFO     | transferring file log.45006595._054242.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678364758/log.45006595._054242.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:13:31] 2025-06-04 12:13:07,448 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678364758/log.45006595._054242.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._054242.job
[2025-06-04 08:13:31] 2025-06-04 12:13:07,459 | INFO     | adding to output.list: log.45006595._054242.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/92/log.45006595._054242.job.log.tg
[2025-06-04 08:13:31] 2025-06-04 12:13:07,460 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:13:31] 2025-06-04 12:13:07,460 | INFO     | summary of transferred files:
[2025-06-04 08:13:31] 2025-06-04 12:13:07,460 | INFO     |  -- lfn=log.45006595._054242.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:13:31] 2025-06-04 12:13:07,460 | INFO     | stage-out finished correctly
[2025-06-04 08:13:31] 2025-06-04 12:13:08,222 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:13:31] 2025-06-04 12:13:08,433 | INFO     | job 6678364758 has state=finished
[2025-06-04 08:13:31] 2025-06-04 12:13:08,433 | INFO     | preparing for final server update for job 6678364758 in state='finished'
[2025-06-04 08:13:31] 2025-06-04 12:13:08,433 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:13:31] 2025-06-04 12:13:08,434 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:13:31] 2025-06-04 12:13:08,434 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:13:31] 2025-06-04 12:13:08,434 | INFO     | job 6678364758 has finished - writing final server update
[2025-06-04 08:13:31] 2025-06-04 12:13:08,434 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:13:31] 2025-06-04 12:13:08,451 | INFO     | executing command: lscpu
[2025-06-04 08:13:31] 2025-06-04 12:13:08,523 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:13:31] 2025-06-04 12:13:10,506 | WARNING  | process 130227 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:13:31] 2025-06-04 12:13:10,507 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678364758/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:13:31] 2025-06-04 12:13:10,693 | INFO     | number of running child processes to parent process 130227: 1
[2025-06-04 08:13:31] 2025-06-04 12:13:10,694 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:13:31] 2025-06-04 12:13:11,352 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:13:31] 2025-06-04 12:13:11,352 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678364758/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:13:31] 2025-06-04 12:13:11,353 | INFO     | extracted standard info from prmon json
[2025-06-04 08:13:31] 2025-06-04 12:13:11,353 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:13:31] 2025-06-04 12:13:11,353 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:13:31] 2025-06-04 12:13:11,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:13:31] 2025-06-04 12:13:11,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:13:31] 2025-06-04 12:13:11,354 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:13:31] 2025-06-04 12:13:11,354 | INFO     | sum of square deviations: 7553630.0
[2025-06-04 08:13:31] 2025-06-04 12:13:11,354 | INFO     | sum of deviations: 2716171339.0
[2025-06-04 08:13:31] 2025-06-04 12:13:11,354 | INFO     | mean x: 1749038191.0
[2025-06-04 08:13:31] 2025-06-04 12:13:11,354 | INFO     | mean y: 2193951.5862068967
[2025-06-04 08:13:31] 2025-06-04 12:13:11,354 | INFO     | -- intersect: -628925540821.0474
[2025-06-04 08:13:31] 2025-06-04 12:13:11,354 | INFO     | intersect: -628925540821.0474
[2025-06-04 08:13:31] 2025-06-04 12:13:11,354 | INFO     | chi2: 0.6245687862020924
[2025-06-04 08:13:31] 2025-06-04 12:13:11,354 | INFO     | -- intersect: -628925540821.0474
[2025-06-04 08:13:31] 2025-06-04 12:13:11,354 | INFO     | current memory leak: 359.58 B/s (using 29 data points, chi2=0.62)
[2025-06-04 08:13:31] 2025-06-04 12:13:11,355 | INFO     | ..............................
[2025-06-04 08:13:31] 2025-06-04 12:13:11,355 | INFO     | . Timing measurements:
[2025-06-04 08:13:31] 2025-06-04 12:13:11,355 | INFO     | . get job = 0 s
[2025-06-04 08:13:31] 2025-06-04 12:13:11,355 | INFO     | . initial setup = 2 s
[2025-06-04 08:13:31] 2025-06-04 12:13:11,355 | INFO     | . payload setup = 4 s
[2025-06-04 08:13:31] 2025-06-04 12:13:11,355 | INFO     | . stage-in = 0 s
[2025-06-04 08:13:31] 2025-06-04 12:13:11,355 | INFO     | . payload execution = 2153 s
[2025-06-04 08:13:31] 2025-06-04 12:13:11,355 | INFO     | . stage-out = 0 s
[2025-06-04 08:13:31] 2025-06-04 12:13:11,355 | INFO     | . log creation = 0 s
[2025-06-04 08:13:31] 2025-06-04 12:13:11,355 | INFO     | ..............................
[2025-06-04 08:13:31] 2025-06-04 12:13:11,597 | INFO     | 
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | job summary report
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | --------------------------------------------------
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | PanDA job id: 6678364758
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | task id: 45006595
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | errors: (none)
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | pilot state: finished 
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | transexitcode: 0
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | exeerrorcode: 0
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | exeerrordiag: 
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | exitcode: 0
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | exitmsg: OK
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | cpuconsumptiontime: 13145 s
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | nevents: 400
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | neventsw: 0
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | pid: 130227
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | pgrp: 130227
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | corecount: 8
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | event service: False
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | sizes: {0: 2397171, 1: 2397370, 3: 2397576, 11: 2397604, 2161: 2422648, 2163: 2431773, 2166: 2431887}
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | --------------------------------------------------
[2025-06-04 08:13:31] 2025-06-04 12:13:11,598 | INFO     | 
[2025-06-04 08:13:31] 2025-06-04 12:13:11,599 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 08:13:31] 2025-06-04 12:13:11,613 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,613 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,613 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,613 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | job 6678364758 has completed (purged errors)
[2025-06-04 08:13:31] 2025-06-04 12:13:11,614 | INFO     | overall cleanup function is called
[2025-06-04 08:13:31] 2025-06-04 12:13:12,621 | INFO     | --- collectZombieJob: --- 10, [130227]
[2025-06-04 08:13:31] 2025-06-04 12:13:12,621 | INFO     | zombie collector waiting for pid 130227
[2025-06-04 08:13:31] 2025-06-04 12:13:12,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:13:31] 2025-06-04 12:13:12,621 | INFO     | collected zombie processes
[2025-06-04 08:13:31] 2025-06-04 12:13:12,621 | INFO     | will attempt to kill all subprocesses of pid=130227
[2025-06-04 08:13:31] 2025-06-04 12:13:12,806 | INFO     | process IDs to be killed: [130227] (in reverse order)
[2025-06-04 08:13:31] 2025-06-04 12:13:12,882 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:13:31] 2025-06-04 12:13:12,882 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:13:31] 2025-06-04 12:13:12,895 | INFO     | did not find any defunct processes belonging to 130227
[2025-06-04 08:13:31] 2025-06-04 12:13:12,905 | INFO     | did not find any defunct processes belonging to 130227
[2025-06-04 08:13:31] 2025-06-04 12:13:12,905 | INFO     | ready for new job
[2025-06-04 08:13:31] 2025-06-04 12:13:12,906 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:13:31] 2025-06-04 12:13:12,907 | INFO     | **************************************
[2025-06-04 08:13:31] 2025-06-04 12:13:12,907 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:13:31] 2025-06-04 12:13:12,907 | INFO     | **************************************
[2025-06-04 08:13:31] 2025-06-04 12:13:12,907 | INFO     | 
[2025-06-04 08:13:31] 2025-06-04 12:13:12,923 | INFO     | architecture information:
[2025-06-04 08:13:31] 2025-06-04 12:13:12,923 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:13:31] 2025-06-04 12:13:12,935 | INFO     | cat /etc/os-release:
[2025-06-04 08:13:31] NAME="CentOS Linux"
[2025-06-04 08:13:31] VERSION="7 (Core)"
[2025-06-04 08:13:31] ID="centos"
[2025-06-04 08:13:31] ID_LIKE="rhel fedora"
[2025-06-04 08:13:31] VERSION_ID="7"
[2025-06-04 08:13:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:13:31] ANSI_COLOR="0;31"
[2025-06-04 08:13:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:13:31] HOME_URL="https://www.centos.org/"
[2025-06-04 08:13:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:13:31] 
[2025-06-04 08:13:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:13:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:13:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:13:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:13:31] 
[2025-06-04 08:13:31] 2025-06-04 12:13:12,935 | INFO     | **************************************
[2025-06-04 08:13:31] 2025-06-04 12:13:13,438 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 08:13:31] 2025-06-04 12:13:13,450 | INFO     | sufficient remaining disk space (74974232576 B)
[2025-06-04 08:13:31] 2025-06-04 12:13:13,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:13:31] 2025-06-04 12:13:13,450 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:13:31] 2025-06-04 12:13:13,450 | INFO     | update_server=False
[2025-06-04 08:13:31] 2025-06-04 12:13:13,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:13:31] 2025-06-04 12:13:13,451 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:13:31] 2025-06-04 12:13:13,451 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:13:31] 2025-06-04 12:13:13,451 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:13:31] 2025-06-04 12:13:13,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:13:31] 2025-06-04 12:13:13,452 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:13:31] 2025-06-04 12:13:13,832 | INFO     | all job control threads have been joined
[2025-06-04 08:13:31] 2025-06-04 12:13:13,960 | INFO     | all data control threads have been joined
[2025-06-04 08:13:31] 2025-06-04 12:13:14,058 | INFO     | all payload control threads have been joined
[2025-06-04 08:13:31] 2025-06-04 12:13:14,202 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:13:31] 2025-06-04 12:13:14,202 | INFO     | aborting loop
[2025-06-04 08:13:31] 2025-06-04 12:13:14,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:13:31] 2025-06-04 12:13:14,455 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:14,656 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:14,837 | INFO     | [job] control thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:14,965 | INFO     | [data] control thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:15,063 | INFO     | [payload] control thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:15,176 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:15,207 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:15,377 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:15,457 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:15,613 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:15,647 | INFO     | [job] validate thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:15,835 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:15,837 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:16,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:13:31] 2025-06-04 12:13:17,422 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:18,283 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:24,042 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:13:31] 2025-06-04 12:13:25,047 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:13:31] 2025-06-04 12:13:26,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139924939011904)>', '<ExcThread(monitor, started 139924447680256)>']
[2025-06-04 08:13:31] 2025-06-04 12:13:26,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:13:31] 2025-06-04 12:13:26,511 | INFO     | [monitor] control thread has ended
[2025-06-04 08:13:31] 2025-06-04 12:13:31,420 | INFO     | all workflow threads have been joined
[2025-06-04 08:13:31] 2025-06-04 12:13:31,421 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:13:31] 2025-06-04 12:13:31,421 | INFO     | traces error code: 0
[2025-06-04 08:13:31] 2025-06-04 12:13:31,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:13:31] 2025-06-04 12:13:31,520 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:13:31] 2025-06-04 12:13:31,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:13:31] 2025-06-04 12:13:31,525 [wrapper] pilotpid: 113154
[2025-06-04 08:13:31] 2025-06-04 12:13:31,527 [wrapper] Pilot exit status: 0
[2025-06-04 08:13:31] 2025-06-04 12:13:31,535 [wrapper] pandaids: 6678364758
[2025-06-04 08:13:31] 2025-06-04 12:13:31,593 [wrapper] cleanup supervisor_pilot  261815 113155
[2025-06-04 08:13:31] 2025-06-04 12:13:31,596 [wrapper] Test setup, not cleaning
[2025-06-04 08:13:31] 2025-06-04 12:13:31,598 [wrapper] apfmon messages muted
[2025-06-04 08:13:31] 2025-06-04 12:13:31,600 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:13:31] 2025-06-04 12:13:31,603 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:13:31]  *** Error codes and diagnostics ***
[2025-06-04 08:13:31]     "exeErrorCode": 0,
[2025-06-04 08:13:31]     "exeErrorDiag": "",
[2025-06-04 08:13:31]     "pilotErrorCode": 0,
[2025-06-04 08:13:31]     "pilotErrorDiag": "",
[2025-06-04 08:13:31]  *** Listing of results directory ***
[2025-06-04 08:13:31] total 388608
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:13:31] -rwx------. 1 boincer umatlas     37140 Jun  4 02:31 runpilot2-wrapper.sh
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:31 queuedata.json
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:13:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:36 run_atlas
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:36 job.xml
[2025-06-04 08:13:31] -rw-r--r--. 2 boincer umatlas 213693393 Jun  4 07:36 EVNT.45006593._002171.pool.root.1
[2025-06-04 08:13:31] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:36 start_atlas.sh
[2025-06-04 08:13:31] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:36 shared
[2025-06-04 08:13:31] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 07:36 input.tar.gz
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:36 boinc_lockfile
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:36 pandaJob.out
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas    986812 Jun  4 07:36 agis_schedconf.cvmfs.json
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas   1598969 Jun  4 07:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:13:31] drwx------. 4 boincer umatlas      4096 Jun  4 07:36 pilot3
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 08:10 init_data.xml
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas        95 Jun  4 08:12 pilot_heartbeat.json
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas 179379981 Jun  4 08:12 HITS.45006595._054242.pool.root.1
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:12 boinc_task_state.xml
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas      1029 Jun  4 08:13 memory_monitor_summary.json
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas    274341 Jun  4 08:13 log.45006595._054242.job.log.tgz.1
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas      7686 Jun  4 08:13 heartbeat.json
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:13 wrapper_checkpoint.txt
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:13 boinc_mmap_file
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas      4548 Jun  4 08:13 pilotlog.txt
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas    243064 Jun  4 08:13 log.45006595._054242.job.log.1
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas       357 Jun  4 08:13 output.list
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:13 runtime_log
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas    532480 Jun  4 08:13 result.tar.gz
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 08:13 runtime_log.err
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas       646 Jun  4 08:13 3ZLKDm6pwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiraKDmyEsfUn.diag
[2025-06-04 08:13:31] -rw-r--r--. 1 boincer umatlas     21191 Jun  4 08:13 stderr.txt
[2025-06-04 08:13:31] HITS file was successfully produced:
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas 179379981 Jun  4 08:12 shared/HITS.pool.root.1
[2025-06-04 08:13:31]  *** Contents of shared directory: ***
[2025-06-04 08:13:31] total 384908
[2025-06-04 08:13:31] -rw-r--r--. 2 boincer umatlas 213693393 Jun  4 07:36 ATLAS.root_0
[2025-06-04 08:13:31] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:36 start_atlas.sh
[2025-06-04 08:13:31] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 07:36 input.tar.gz
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas 179379981 Jun  4 08:12 HITS.pool.root.1
[2025-06-04 08:13:31] -rw-------. 1 boincer umatlas    532480 Jun  4 08:13 result.tar.gz
08:13:33 (107629): run_atlas exited; CPU time 13178.327688
08:13:33 (107629): called boinc_finish(0)

</stderr_txt>
]]>

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