Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:38:31 (22476): wrapper (7.7.26015): starting
07:38:31 (22476): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:38:31] Arguments: --nthreads 8
[2025-06-04 07:38:31] Threads: 8
[2025-06-04 07:38:31] Checking for CVMFS
[2025-06-04 07:38:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:38:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:38:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:38:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:38:31] 2.11.2.0 3213 440569 242624 146779 1 60 14732944 20275201 917 130560 0 130238778 99.991 19305964 18163 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 07:38:31] CVMFS is ok
[2025-06-04 07:38:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:38:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:38:31] Further information can be found at the LHC@home message board.
[2025-06-04 07:38:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:38:31] Checking for apptainer binary...
[2025-06-04 07:38:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:38:31] Running /usr/bin/apptainer --version
[2025-06-04 07:38:31] apptainer version 1.3.2-1.el7
[2025-06-04 07:38:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:38:31] c-205-38.aglt2.org
[2025-06-04 07:38:31] apptainer works
[2025-06-04 07:38:31] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:38:31] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:38:31] Starting ATLAS job with PandaID=6678364746
[2025-06-04 07:38:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:28:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:28:55]  protocol_id=None
[2025-06-04 08:28:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:28:55]  replicas=None
[2025-06-04 08:28:55]  scope=mc23_13p6TeV
[2025-06-04 08:28:55]  status=None
[2025-06-04 08:28:55]  status_code=0
[2025-06-04 08:28:55]  storage_token=
[2025-06-04 08:28:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678364746/log.45006595._054230.job.log.tgz.1
[2025-06-04 08:28:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/8f/log.45006595._054230.job.log.tgz.1
[2025-06-04 08:28:55]  workdir=None
[2025-06-04 08:28:55] ]
[2025-06-04 08:28:55] 2025-06-04 12:28:27,209 | INFO     | transferring file log.45006595._054230.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678364746/log.45006595._054230.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:28:55] 2025-06-04 12:28:27,209 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678364746/log.45006595._054230.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054230.job
[2025-06-04 08:28:55] 2025-06-04 12:28:27,226 | INFO     | adding to output.list: log.45006595._054230.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/8f/log.45006595._054230.job.log.tg
[2025-06-04 08:28:55] 2025-06-04 12:28:27,226 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:28:55] 2025-06-04 12:28:27,227 | INFO     | summary of transferred files:
[2025-06-04 08:28:55] 2025-06-04 12:28:27,227 | INFO     |  -- lfn=log.45006595._054230.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:28:55] 2025-06-04 12:28:27,227 | INFO     | stage-out finished correctly
[2025-06-04 08:28:55] 2025-06-04 12:28:28,982 | INFO     | monitor loop #228: job 0:6678364746 is in state 'finished'
[2025-06-04 08:28:55] 2025-06-04 12:28:28,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:28:55] 2025-06-04 12:28:29,186 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:28:55] 2025-06-04 12:28:31,485 | INFO     | monitor loop #229: job 0:6678364746 is in state 'finished'
[2025-06-04 08:28:55] 2025-06-04 12:28:31,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:28:55] 2025-06-04 12:28:32,037 | INFO     | job 6678364746 has state=finished
[2025-06-04 08:28:55] 2025-06-04 12:28:32,037 | INFO     | preparing for final server update for job 6678364746 in state='finished'
[2025-06-04 08:28:55] 2025-06-04 12:28:32,103 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 08:28:55] 2025-06-04 12:28:32,103 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:28:55] 2025-06-04 12:28:32,103 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:28:55] 2025-06-04 12:28:32,103 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:28:55] 2025-06-04 12:28:32,103 | INFO     | job 6678364746 has finished - writing final server update
[2025-06-04 08:28:55] 2025-06-04 12:28:32,104 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:28:55] 2025-06-04 12:28:32,105 | INFO     | executing command: lscpu
[2025-06-04 08:28:55] 2025-06-04 12:28:32,137 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:28:55] 2025-06-04 12:28:33,686 | INFO     | PID=26069 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 08:28:55] 2025-06-04 12:28:33,686 | INFO     | .. there are 2 such processes running
[2025-06-04 08:28:55] 2025-06-04 12:28:33,988 | INFO     | monitor loop #230: job 0:6678364746 is in state 'finished'
[2025-06-04 08:28:55] 2025-06-04 12:28:33,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:28:55] 2025-06-04 12:28:34,505 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:28:55] 2025-06-04 12:28:34,506 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678364746/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:28:55] 2025-06-04 12:28:34,506 | INFO     | extracted standard info from prmon json
[2025-06-04 08:28:55] 2025-06-04 12:28:34,506 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:28:55] 2025-06-04 12:28:34,506 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:28:55] 2025-06-04 12:28:34,507 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:28:55] 2025-06-04 12:28:34,507 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:28:55] 2025-06-04 12:28:34,507 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:28:55] 2025-06-04 12:28:34,507 | INFO     | sum of square deviations: 22960430.5
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | sum of deviations: -2284955019.0
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | mean x: 1749038694.5
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | mean y: 2685360.1428571427
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | -- intersect: 174061910574.7129
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | intersect: 174061910574.7129
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | chi2: 0.013388264610690336
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | -- intersect: 174061910574.7129
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | current memory leak: -99.52 B/s (using 42 data points, chi2=0.01)
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | ..............................
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | . Timing measurements:
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | . get job = 0 s
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | . initial setup = 2 s
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | . payload setup = 4 s
[2025-06-04 08:28:55] 2025-06-04 12:28:34,508 | INFO     | . stage-in = 0 s
[2025-06-04 08:28:55] 2025-06-04 12:28:34,509 | INFO     | . payload execution = 2967 s
[2025-06-04 08:28:55] 2025-06-04 12:28:34,509 | INFO     | . stage-out = 0 s
[2025-06-04 08:28:55] 2025-06-04 12:28:34,509 | INFO     | . log creation = 0 s
[2025-06-04 08:28:55] 2025-06-04 12:28:34,509 | INFO     | ..............................
[2025-06-04 08:28:55] 2025-06-04 12:28:34,552 | INFO     | 
[2025-06-04 08:28:55] 2025-06-04 12:28:34,553 | INFO     | job summary report
[2025-06-04 08:28:55] 2025-06-04 12:28:34,553 | INFO     | --------------------------------------------------
[2025-06-04 08:28:55] 2025-06-04 12:28:34,553 | INFO     | PanDA job id: 6678364746
[2025-06-04 08:28:55] 2025-06-04 12:28:34,553 | INFO     | task id: 45006595
[2025-06-04 08:28:55] 2025-06-04 12:28:34,553 | INFO     | errors: (none)
[2025-06-04 08:28:55] 2025-06-04 12:28:34,553 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:28:55] 2025-06-04 12:28:34,553 | INFO     | pilot state: finished 
[2025-06-04 08:28:55] 2025-06-04 12:28:34,553 | INFO     | transexitcode: 0
[2025-06-04 08:28:55] 2025-06-04 12:28:34,553 | INFO     | exeerrorcode: 0
[2025-06-04 08:28:55] 2025-06-04 12:28:34,553 | INFO     | exeerrordiag: 
[2025-06-04 08:28:55] 2025-06-04 12:28:34,554 | INFO     | exitcode: 0
[2025-06-04 08:28:55] 2025-06-04 12:28:34,554 | INFO     | exitmsg: OK
[2025-06-04 08:28:55] 2025-06-04 12:28:34,554 | INFO     | cpuconsumptiontime: 21581 s
[2025-06-04 08:28:55] 2025-06-04 12:28:34,554 | INFO     | nevents: 400
[2025-06-04 08:28:55] 2025-06-04 12:28:34,554 | INFO     | neventsw: 0
[2025-06-04 08:28:55] 2025-06-04 12:28:34,554 | INFO     | pid: 32518
[2025-06-04 08:28:55] 2025-06-04 12:28:34,554 | INFO     | pgrp: 32518
[2025-06-04 08:28:55] 2025-06-04 12:28:34,554 | INFO     | corecount: 8
[2025-06-04 08:28:55] 2025-06-04 12:28:34,554 | INFO     | event service: False
[2025-06-04 08:28:55] 2025-06-04 12:28:34,554 | INFO     | sizes: {0: 2396514, 1: 2397370, 3: 2397576, 12: 2397604, 2974: 2422989, 2975: 2431930, 2977: 2432114, 2982: 2432284}
[2025-06-04 08:28:55] 2025-06-04 12:28:34,555 | INFO     | --------------------------------------------------
[2025-06-04 08:28:55] 2025-06-04 12:28:34,555 | INFO     | 
[2025-06-04 08:28:55] 2025-06-04 12:28:34,555 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:28:55] 2025-06-04 12:28:34,571 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,572 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,572 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,572 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,574 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:28:55] 2025-06-04 12:28:34,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,574 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:28:55] 2025-06-04 12:28:34,574 | INFO     | job 6678364746 has completed (purged errors)
[2025-06-04 08:28:55] 2025-06-04 12:28:34,574 | INFO     | overall cleanup function is called
[2025-06-04 08:28:55] 2025-06-04 12:28:35,582 | INFO     | --- collectZombieJob: --- 10, [32518]
[2025-06-04 08:28:55] 2025-06-04 12:28:35,582 | INFO     | zombie collector waiting for pid 32518
[2025-06-04 08:28:55] 2025-06-04 12:28:35,583 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:28:55] 2025-06-04 12:28:35,583 | INFO     | collected zombie processes
[2025-06-04 08:28:55] 2025-06-04 12:28:35,583 | INFO     | will attempt to kill all subprocesses of pid=32518
[2025-06-04 08:28:55] 2025-06-04 12:28:35,681 | INFO     | process IDs to be killed: [32518] (in reverse order)
[2025-06-04 08:28:55] 2025-06-04 12:28:35,729 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:28:55] 2025-06-04 12:28:35,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:28:55] 2025-06-04 12:28:35,732 | INFO     | did not find any defunct processes belonging to 32518
[2025-06-04 08:28:55] 2025-06-04 12:28:35,734 | INFO     | did not find any defunct processes belonging to 32518
[2025-06-04 08:28:55] 2025-06-04 12:28:35,734 | INFO     | ready for new job
[2025-06-04 08:28:55] 2025-06-04 12:28:35,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:28:55] 2025-06-04 12:28:35,736 | INFO     | **************************************
[2025-06-04 08:28:55] 2025-06-04 12:28:35,736 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:28:55] 2025-06-04 12:28:35,736 | INFO     | **************************************
[2025-06-04 08:28:55] 2025-06-04 12:28:35,736 | INFO     | 
[2025-06-04 08:28:55] 2025-06-04 12:28:35,737 | INFO     | architecture information:
[2025-06-04 08:28:55] 2025-06-04 12:28:35,737 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:28:55] 2025-06-04 12:28:35,751 | INFO     | cat /etc/os-release:
[2025-06-04 08:28:55] NAME="CentOS Linux"
[2025-06-04 08:28:55] VERSION="7 (Core)"
[2025-06-04 08:28:55] ID="centos"
[2025-06-04 08:28:55] ID_LIKE="rhel fedora"
[2025-06-04 08:28:55] VERSION_ID="7"
[2025-06-04 08:28:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:28:55] ANSI_COLOR="0;31"
[2025-06-04 08:28:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:28:55] HOME_URL="https://www.centos.org/"
[2025-06-04 08:28:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:28:55] 
[2025-06-04 08:28:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:28:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:28:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:28:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:28:55] 
[2025-06-04 08:28:55] 2025-06-04 12:28:35,752 | INFO     | **************************************
[2025-06-04 08:28:55] 2025-06-04 12:28:36,255 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:28:55] 2025-06-04 12:28:36,271 | INFO     | sufficient remaining disk space (32804700160 B)
[2025-06-04 08:28:55] 2025-06-04 12:28:36,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:28:55] 2025-06-04 12:28:36,271 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:28:55] 2025-06-04 12:28:36,272 | INFO     | update_server=False
[2025-06-04 08:28:55] 2025-06-04 12:28:36,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:28:55] 2025-06-04 12:28:36,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:28:55] 2025-06-04 12:28:36,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:28:55] 2025-06-04 12:28:36,272 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:28:55] 2025-06-04 12:28:36,273 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:28:55] 2025-06-04 12:28:36,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:28:55] 2025-06-04 12:28:36,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:28:55] 2025-06-04 12:28:36,290 | INFO     | all data control threads have been joined
[2025-06-04 08:28:55] 2025-06-04 12:28:36,491 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:28:55] 2025-06-04 12:28:36,491 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:28:55] 2025-06-04 12:28:36,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:28:55] 2025-06-04 12:28:36,492 | INFO     | will abort loop
[2025-06-04 08:28:55] 2025-06-04 12:28:36,598 | INFO     | all job control threads have been joined
[2025-06-04 08:28:55] 2025-06-04 12:28:37,093 | INFO     | all payload control threads have been joined
[2025-06-04 08:28:55] 2025-06-04 12:28:37,273 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:37,278 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:37,296 | INFO     | [data] control thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:37,332 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:37,460 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:37,497 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:37,603 | INFO     | [job] control thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:37,691 | INFO     | [job] validate thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:38,019 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:38,030 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:38,069 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:38,099 | INFO     | [payload] control thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:38,172 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:38,278 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:39,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:28:55] 2025-06-04 12:28:43,779 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:47,044 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:28:55] 2025-06-04 12:28:48,050 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:28:55] 2025-06-04 12:28:49,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831489021760)>', '<ExcThread(monitor, started 139831262131968)>']
[2025-06-04 08:28:55] 2025-06-04 12:28:50,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:28:55] 2025-06-04 12:28:50,343 | INFO     | [monitor] control thread has ended
[2025-06-04 08:28:55] 2025-06-04 12:28:54,886 | INFO     | all workflow threads have been joined
[2025-06-04 08:28:55] 2025-06-04 12:28:54,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:28:55] 2025-06-04 12:28:54,886 | INFO     | traces error code: 0
[2025-06-04 08:28:55] 2025-06-04 12:28:54,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:28:55] 2025-06-04 12:28:54,980 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:28:55] 2025-06-04 12:28:54,983 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:28:55] 2025-06-04 12:28:54,987 [wrapper] pilotpid: 26069
[2025-06-04 08:28:55] 2025-06-04 12:28:54,990 [wrapper] Pilot exit status: 0
[2025-06-04 08:28:55] 2025-06-04 12:28:55,000 [wrapper] pandaids: 6678364746
[2025-06-04 08:28:55] 2025-06-04 12:28:55,031 [wrapper] cleanup supervisor_pilot  6542 26070
[2025-06-04 08:28:55] 2025-06-04 12:28:55,034 [wrapper] Test setup, not cleaning
[2025-06-04 08:28:55] 2025-06-04 12:28:55,037 [wrapper] apfmon messages muted
[2025-06-04 08:28:55] 2025-06-04 12:28:55,040 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:28:55] 2025-06-04 12:28:55,043 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:28:55]  *** Error codes and diagnostics ***
[2025-06-04 08:28:55]     "exeErrorCode": 0,
[2025-06-04 08:28:55]     "exeErrorDiag": "",
[2025-06-04 08:28:55]     "pilotErrorCode": 0,
[2025-06-04 08:28:55]     "pilotErrorDiag": "",
[2025-06-04 08:28:55]  *** Listing of results directory ***
[2025-06-04 08:28:55] total 389696
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:28 queuedata.json
[2025-06-04 08:28:55] -rwx------ 1 boincer umatlas     37140 Jun  4 02:28 runpilot2-wrapper.sh
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:28:55] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:38 run_atlas
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:38 job.xml
[2025-06-04 08:28:55] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:38 start_atlas.sh
[2025-06-04 08:28:55] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:38 shared
[2025-06-04 08:28:55] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 07:38 input.tar.gz
[2025-06-04 08:28:55] -rw-r--r-- 2 boincer umatlas 216855846 Jun  4 07:38 EVNT.45006593._002170.pool.root.1
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:38 boinc_lockfile
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 07:38 pandaJob.out
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas    986812 Jun  4 07:38 agis_schedconf.cvmfs.json
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas   1598969 Jun  4 07:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:28:55] drwx------ 4 boincer umatlas      4096 Jun  4 07:38 pilot3
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas      6051 Jun  4 08:20 init_data.xml
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas 177131075 Jun  4 08:28 HITS.45006595._054230.pool.root.1
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas        95 Jun  4 08:28 pilot_heartbeat.json
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas       529 Jun  4 08:28 boinc_task_state.xml
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas      1046 Jun  4 08:28 memory_monitor_summary.json
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas    300639 Jun  4 08:28 log.45006595._054230.job.log.tgz.1
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas      7736 Jun  4 08:28 heartbeat.json
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:28 wrapper_checkpoint.txt
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:28 boinc_mmap_file
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas      4734 Jun  4 08:28 pilotlog.txt
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas    317587 Jun  4 08:28 log.45006595._054230.job.log.1
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas       357 Jun  4 08:28 output.list
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:28 runtime_log
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas    634880 Jun  4 08:28 result.tar.gz
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 08:28 runtime_log.err
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas       656 Jun  4 08:28 H5LKDm0mwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUnKDm4Fciwm.diag
[2025-06-04 08:28:55] -rw-r--r-- 1 boincer umatlas     21766 Jun  4 08:28 stderr.txt
[2025-06-04 08:28:55] HITS file was successfully produced:
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas 177131075 Jun  4 08:28 shared/HITS.pool.root.1
[2025-06-04 08:28:55]  *** Contents of shared directory: ***
[2025-06-04 08:28:55] total 385896
[2025-06-04 08:28:55] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:38 start_atlas.sh
[2025-06-04 08:28:55] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 07:38 input.tar.gz
[2025-06-04 08:28:55] -rw-r--r-- 2 boincer umatlas 216855846 Jun  4 07:38 ATLAS.root_0
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas 177131075 Jun  4 08:28 HITS.pool.root.1
[2025-06-04 08:28:55] -rw------- 1 boincer umatlas    634880 Jun  4 08:28 result.tar.gz
08:28:57 (22476): run_atlas exited; CPU time 21567.790651
08:28:57 (22476): called boinc_finish(0)

</stderr_txt>
]]>

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