Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:07:08 (3749739): wrapper (7.7.26015): starting
08:07:08 (3749739): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:07:08] Arguments: --nthreads 12
[2025-06-04 08:07:08] Threads: 12
[2025-06-04 08:07:08] Checking for CVMFS
[2025-06-04 08:07:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:07:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:07:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:07:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:07:09] 2.12.6.0 2658689 23250 488856 146779 3 197 24454537 32935937 3757 16776704 1 93629404 99.587 116763377 34455 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:07:09] CVMFS is ok
[2025-06-04 08:07:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:07:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:07:09] Further information can be found at the LHC@home message board.
[2025-06-04 08:07:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:07:09] Checking for apptainer binary...
[2025-06-04 08:07:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:07:09] Running /usr/bin/apptainer --version
[2025-06-04 08:07:09] apptainer version 1.4.1-1.el9
[2025-06-04 08:07:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:07:09] c6-5-7-2.aglt2.org
[2025-06-04 08:07:09] apptainer works
[2025-06-04 08:07:09] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:07:09] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:07:09] Starting ATLAS job with PandaID=6678390154
[2025-06-04 08:07:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:44:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:44:47]  is_altstaged=None
[2025-06-04 08:44:47]  is_tar=False
[2025-06-04 08:44:47]  lfn=log.45006595._054605.job.log.tgz.1
[2025-06-04 08:44:47]  mtime=0
[2025-06-04 08:44:47]  protocol_id=None
[2025-06-04 08:44:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:44:47]  replicas=None
[2025-06-04 08:44:47]  scope=mc23_13p6TeV
[2025-06-04 08:44:47]  status=None
[2025-06-04 08:44:47]  status_code=0
[2025-06-04 08:44:47]  storage_token=
[2025-06-04 08:44:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678390154/log.45006595._054605.job.log.tgz.1
[2025-06-04 08:44:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/8b/log.45006595._054605.job.log.tgz.1
[2025-06-04 08:44:47]  workdir=None
[2025-06-04 08:44:47] ]
[2025-06-04 08:44:47] 2025-06-04 12:44:23,689 | INFO     | transferring file log.45006595._054605.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678390154/log.45006595._054605.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:44:47] 2025-06-04 12:44:23,689 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678390154/log.45006595._054605.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054605.job
[2025-06-04 08:44:47] 2025-06-04 12:44:23,700 | INFO     | adding to output.list: log.45006595._054605.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/8b/log.45006595._054605.job.log.tg
[2025-06-04 08:44:47] 2025-06-04 12:44:23,701 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:44:47] 2025-06-04 12:44:23,701 | INFO     | summary of transferred files:
[2025-06-04 08:44:47] 2025-06-04 12:44:23,701 | INFO     |  -- lfn=log.45006595._054605.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:44:47] 2025-06-04 12:44:23,701 | INFO     | stage-out finished correctly
[2025-06-04 08:44:47] 2025-06-04 12:44:23,746 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:44:47] 2025-06-04 12:44:24,780 | INFO     | PID=3753372 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 08:44:47] 2025-06-04 12:44:24,781 | INFO     | .. there are 8 such processes running
[2025-06-04 08:44:47] 2025-06-04 12:44:25,577 | INFO     | monitor loop #172: job 0:6678390154 is in state 'finished'
[2025-06-04 08:44:47] 2025-06-04 12:44:25,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:44:47] 2025-06-04 12:44:25,792 | INFO     | job 6678390154 has state=finished
[2025-06-04 08:44:47] 2025-06-04 12:44:25,792 | INFO     | preparing for final server update for job 6678390154 in state='finished'
[2025-06-04 08:44:47] 2025-06-04 12:44:25,793 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:44:47] 2025-06-04 12:44:25,793 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:44:47] 2025-06-04 12:44:25,793 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:44:47] 2025-06-04 12:44:25,793 | INFO     | job 6678390154 has finished - writing final server update
[2025-06-04 08:44:47] 2025-06-04 12:44:25,793 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:44:47] 2025-06-04 12:44:25,806 | INFO     | executing command: lscpu
[2025-06-04 08:44:47] 2025-06-04 12:44:25,851 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:44:47] 2025-06-04 12:44:28,080 | INFO     | monitor loop #173: job 0:6678390154 is in state 'finished'
[2025-06-04 08:44:47] 2025-06-04 12:44:28,080 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:44:47] 2025-06-04 12:44:28,382 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:44:47] 2025-06-04 12:44:28,382 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678390154/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:44:47] 2025-06-04 12:44:28,383 | INFO     | extracted standard info from prmon json
[2025-06-04 08:44:47] 2025-06-04 12:44:28,383 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:44:47] 2025-06-04 12:44:28,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:44:47] 2025-06-04 12:44:28,383 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:44:47] 2025-06-04 12:44:28,383 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:44:47] 2025-06-04 12:44:28,384 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:44:47] 2025-06-04 12:44:28,384 | INFO     | sum of square deviations: 8362947.5
[2025-06-04 08:44:47] 2025-06-04 12:44:28,384 | INFO     | sum of deviations: 2341994502.5000005
[2025-06-04 08:44:47] 2025-06-04 12:44:28,384 | INFO     | mean x: 1749040046.5
[2025-06-04 08:44:47] 2025-06-04 12:44:28,384 | INFO     | mean y: 2319551.1666666665
[2025-06-04 08:44:47] 2025-06-04 12:44:28,384 | INFO     | -- intersect: -489806109062.7096
[2025-06-04 08:44:47] 2025-06-04 12:44:28,384 | INFO     | intersect: -489806109062.7096
[2025-06-04 08:44:47] 2025-06-04 12:44:28,384 | INFO     | chi2: 0.4736045043500953
[2025-06-04 08:44:47] 2025-06-04 12:44:28,384 | INFO     | -- intersect: -489806109062.7096
[2025-06-04 08:44:47] 2025-06-04 12:44:28,385 | INFO     | current memory leak: 280.04 B/s (using 30 data points, chi2=0.47)
[2025-06-04 08:44:47] 2025-06-04 12:44:28,385 | INFO     | ..............................
[2025-06-04 08:44:47] 2025-06-04 12:44:28,385 | INFO     | . Timing measurements:
[2025-06-04 08:44:47] 2025-06-04 12:44:28,385 | INFO     | . get job = 0 s
[2025-06-04 08:44:47] 2025-06-04 12:44:28,385 | INFO     | . initial setup = 2 s
[2025-06-04 08:44:47] 2025-06-04 12:44:28,385 | INFO     | . payload setup = 4 s
[2025-06-04 08:44:47] 2025-06-04 12:44:28,385 | INFO     | . stage-in = 0 s
[2025-06-04 08:44:47] 2025-06-04 12:44:28,385 | INFO     | . payload execution = 2205 s
[2025-06-04 08:44:47] 2025-06-04 12:44:28,385 | INFO     | . stage-out = 0 s
[2025-06-04 08:44:47] 2025-06-04 12:44:28,385 | INFO     | . log creation = 0 s
[2025-06-04 08:44:47] 2025-06-04 12:44:28,385 | INFO     | ..............................
[2025-06-04 08:44:47] 2025-06-04 12:44:28,429 | INFO     | 
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | job summary report
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | --------------------------------------------------
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | PanDA job id: 6678390154
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | task id: 45006595
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | errors: (none)
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | pilot state: finished 
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | transexitcode: 0
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | exeerrorcode: 0
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | exeerrordiag: 
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | exitcode: 0
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | exitmsg: OK
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | cpuconsumptiontime: 19170 s
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | nevents: 400
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | neventsw: 0
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | pid: 3761385
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | pgrp: 3761385
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | corecount: 12
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | event service: False
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 2213: 2422583, 2214: 2431580, 2218: 2431694}
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | --------------------------------------------------
[2025-06-04 08:44:47] 2025-06-04 12:44:28,430 | INFO     | 
[2025-06-04 08:44:47] 2025-06-04 12:44:28,431 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:44:47] 2025-06-04 12:44:28,442 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,442 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,442 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | job 6678390154 has completed (purged errors)
[2025-06-04 08:44:47] 2025-06-04 12:44:28,443 | INFO     | overall cleanup function is called
[2025-06-04 08:44:47] 2025-06-04 12:44:29,450 | INFO     | --- collectZombieJob: --- 10, [3761385]
[2025-06-04 08:44:47] 2025-06-04 12:44:29,450 | INFO     | zombie collector waiting for pid 3761385
[2025-06-04 08:44:47] 2025-06-04 12:44:29,450 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:44:47] 2025-06-04 12:44:29,450 | INFO     | collected zombie processes
[2025-06-04 08:44:47] 2025-06-04 12:44:29,450 | INFO     | will attempt to kill all subprocesses of pid=3761385
[2025-06-04 08:44:47] 2025-06-04 12:44:29,576 | INFO     | process IDs to be killed: [3761385] (in reverse order)
[2025-06-04 08:44:47] 2025-06-04 12:44:29,626 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:44:47] 2025-06-04 12:44:29,626 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:44:47] 2025-06-04 12:44:29,632 | INFO     | did not find any defunct processes belonging to 3761385
[2025-06-04 08:44:47] 2025-06-04 12:44:29,636 | INFO     | did not find any defunct processes belonging to 3761385
[2025-06-04 08:44:47] 2025-06-04 12:44:29,637 | INFO     | ready for new job
[2025-06-04 08:44:47] 2025-06-04 12:44:29,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:44:47] 2025-06-04 12:44:29,637 | INFO     | **************************************
[2025-06-04 08:44:47] 2025-06-04 12:44:29,638 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:44:47] 2025-06-04 12:44:29,638 | INFO     | **************************************
[2025-06-04 08:44:47] 2025-06-04 12:44:29,638 | INFO     | 
[2025-06-04 08:44:47] 2025-06-04 12:44:29,652 | INFO     | architecture information:
[2025-06-04 08:44:47] 2025-06-04 12:44:29,652 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:44:47] 2025-06-04 12:44:29,662 | INFO     | cat /etc/os-release:
[2025-06-04 08:44:47] NAME="CentOS Linux"
[2025-06-04 08:44:47] VERSION="7 (Core)"
[2025-06-04 08:44:47] ID="centos"
[2025-06-04 08:44:47] ID_LIKE="rhel fedora"
[2025-06-04 08:44:47] VERSION_ID="7"
[2025-06-04 08:44:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:44:47] ANSI_COLOR="0;31"
[2025-06-04 08:44:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:44:47] HOME_URL="https://www.centos.org/"
[2025-06-04 08:44:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:44:47] 
[2025-06-04 08:44:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:44:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:44:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:44:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:44:47] 
[2025-06-04 08:44:47] 2025-06-04 12:44:29,662 | INFO     | **************************************
[2025-06-04 08:44:47] 2025-06-04 12:44:30,163 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:44:47] 2025-06-04 12:44:30,173 | INFO     | sufficient remaining disk space (76371984384 B)
[2025-06-04 08:44:47] 2025-06-04 12:44:30,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:44:47] 2025-06-04 12:44:30,174 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:44:47] 2025-06-04 12:44:30,174 | INFO     | update_server=False
[2025-06-04 08:44:47] 2025-06-04 12:44:30,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:44:47] 2025-06-04 12:44:30,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:44:47] 2025-06-04 12:44:30,174 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:44:47] 2025-06-04 12:44:30,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:44:47] 2025-06-04 12:44:30,338 | INFO     | all data control threads have been joined
[2025-06-04 08:44:47] 2025-06-04 12:44:30,430 | INFO     | all payload control threads have been joined
[2025-06-04 08:44:47] 2025-06-04 12:44:30,583 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:44:47] 2025-06-04 12:44:30,583 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:44:47] 2025-06-04 12:44:30,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:44:47] 2025-06-04 12:44:30,583 | INFO     | will abort loop
[2025-06-04 08:44:47] 2025-06-04 12:44:30,797 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:44:47] 2025-06-04 12:44:30,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:44:47] 2025-06-04 12:44:30,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:44:47] 2025-06-04 12:44:31,179 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:31,179 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:31,340 | INFO     | [data] control thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:31,436 | INFO     | [payload] control thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:31,588 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:31,685 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:31,761 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:31,835 | INFO     | all job control threads have been joined
[2025-06-04 08:44:47] 2025-06-04 12:44:31,904 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:32,026 | INFO     | [job] validate thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:32,171 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:32,180 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:32,232 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:32,307 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:32,840 | INFO     | [job] control thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:34,180 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:40,796 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:44:47] 2025-06-04 12:44:41,797 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:44:47] 2025-06-04 12:44:42,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140376126650176)>', '<ExcThread(monitor, started 140375486355200)>']
[2025-06-04 08:44:47] 2025-06-04 12:44:42,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:44:47] 2025-06-04 12:44:42,855 | INFO     | [monitor] control thread has ended
[2025-06-04 08:44:47] 2025-06-04 12:44:47,276 | INFO     | all workflow threads have been joined
[2025-06-04 08:44:47] 2025-06-04 12:44:47,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:44:47] 2025-06-04 12:44:47,276 | INFO     | traces error code: 0
[2025-06-04 08:44:47] 2025-06-04 12:44:47,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:44:47] 2025-06-04 12:44:47,433 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:44:47] 2025-06-04 12:44:47,435 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:44:47] 2025-06-04 12:44:47,436 [wrapper] pilotpid: 3753372
[2025-06-04 08:44:47] 2025-06-04 12:44:47,437 [wrapper] Pilot exit status: 0
[2025-06-04 08:44:47] 2025-06-04 12:44:47,443 [wrapper] pandaids: 6678390154
[2025-06-04 08:44:47] 2025-06-04 12:44:47,477 [wrapper] cleanup supervisor_pilot 3832073 3753373
[2025-06-04 08:44:47] 2025-06-04 12:44:47,478 [wrapper] Test setup, not cleaning
[2025-06-04 08:44:47] 2025-06-04 12:44:47,480 [wrapper] apfmon messages muted
[2025-06-04 08:44:47] 2025-06-04 12:44:47,481 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:44:47] 2025-06-04 12:44:47,483 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:44:47]  *** Error codes and diagnostics ***
[2025-06-04 08:44:47]     "exeErrorCode": 0,
[2025-06-04 08:44:47]     "exeErrorDiag": "",
[2025-06-04 08:44:47]     "pilotErrorCode": 0,
[2025-06-04 08:44:47]     "pilotErrorDiag": "",
[2025-06-04 08:44:47]  *** Listing of results directory ***
[2025-06-04 08:44:47] total 384040
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:45 queuedata.json
[2025-06-04 08:44:47] -rwx------. 1 boincer umatlas     37140 Jun  4 02:45 runpilot2-wrapper.sh
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:44:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:07 run_atlas
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:07 job.xml
[2025-06-04 08:44:47] -rw-r--r--. 2 boincer umatlas 217133782 Jun  4 08:07 EVNT.45006593._002185.pool.root.1
[2025-06-04 08:44:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:07 start_atlas.sh
[2025-06-04 08:44:47] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:07 shared
[2025-06-04 08:44:47] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 08:07 input.tar.gz
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:07 boinc_lockfile
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:07 pandaJob.out
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas    986812 Jun  4 08:07 agis_schedconf.cvmfs.json
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:07 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:44:47] drwx------. 4 boincer umatlas      4096 Jun  4 08:07 pilot3
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 08:38 init_data.xml
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas        95 Jun  4 08:43 pilot_heartbeat.json
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas 171119182 Jun  4 08:43 HITS.45006595._054605.pool.root.1
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:44 boinc_task_state.xml
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas      1028 Jun  4 08:44 memory_monitor_summary.json
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas    332552 Jun  4 08:44 log.45006595._054605.job.log.tgz.1
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas      7705 Jun  4 08:44 heartbeat.json
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:44 boinc_mmap_file
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:44 wrapper_checkpoint.txt
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas      4611 Jun  4 08:44 pilotlog.txt
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas    250190 Jun  4 08:44 log.45006595._054605.job.log.1
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas       357 Jun  4 08:44 output.list
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:44 runtime_log
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas    604160 Jun  4 08:44 result.tar.gz
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas       648 Jun  4 08:44 RYhKDmw3wg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRanKDmwiiH0n.diag
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas      8661 Jun  4 08:44 runtime_log.err
[2025-06-04 08:44:47] -rw-r--r--. 1 boincer umatlas     21429 Jun  4 08:44 stderr.txt
[2025-06-04 08:44:47] HITS file was successfully produced:
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas 171119182 Jun  4 08:43 shared/HITS.pool.root.1
[2025-06-04 08:44:47]  *** Contents of shared directory: ***
[2025-06-04 08:44:47] total 380272
[2025-06-04 08:44:47] -rw-r--r--. 2 boincer umatlas 217133782 Jun  4 08:07 ATLAS.root_0
[2025-06-04 08:44:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:07 start_atlas.sh
[2025-06-04 08:44:47] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 08:07 input.tar.gz
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas 171119182 Jun  4 08:43 HITS.pool.root.1
[2025-06-04 08:44:47] -rw-------. 1 boincer umatlas    604160 Jun  4 08:44 result.tar.gz
08:44:48 (3749739): run_atlas exited; CPU time 19193.202380
08:44:48 (3749739): called boinc_finish(0)

</stderr_txt>
]]>

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