Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:02:57 (31447): wrapper (7.7.26015): starting
10:02:57 (31447): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 10:02:57] Arguments: --nthreads 12
[2025-06-04 10:02:57] Threads: 12
[2025-06-04 10:02:57] Checking for CVMFS
[2025-06-04 10:02:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:02:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:02:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:02:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:02:58] 2.10.0.0 29567 2664 111664 146783 3 187 15047566 16777217 922 130560 0 10828937 99.998 629053 6801 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-04 10:02:58] CVMFS is ok
[2025-06-04 10:02:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:02:58] Checking for apptainer binary...
[2025-06-04 10:02:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:02:58] Running /usr/bin/apptainer --version
[2025-06-04 10:02:58] apptainer version 1.3.6-150600.4.9.1
[2025-06-04 10:02:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:02:58] boinc-runner
[2025-06-04 10:02:58] apptainer works
[2025-06-04 10:02:58] Set ATHENA_PROC_NUMBER=12
[2025-06-04 10:02:58] Set ATHENA_CORE_NUMBER=12
[2025-06-04 10:02:58] Starting ATLAS job with PandaID=6678390152
[2025-06-04 10:02:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:31:44]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:31:44]  is_tar=False
[2025-06-04 10:31:44]  lfn=log.45006595._054603.job.log.tgz.1
[2025-06-04 10:31:44]  mtime=0
[2025-06-04 10:31:44]  protocol_id=None
[2025-06-04 10:31:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:31:44]  replicas=None
[2025-06-04 10:31:44]  scope=mc23_13p6TeV
[2025-06-04 10:31:44]  status=None
[2025-06-04 10:31:44]  status_code=0
[2025-06-04 10:31:44]  storage_token=
[2025-06-04 10:31:44]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6678390152/log.45006595._054603.job.log.tgz.1
[2025-06-04 10:31:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/9a/log.45006595._054603.job.log.tgz.1
[2025-06-04 10:31:44]  workdir=None
[2025-06-04 10:31:44] ]
[2025-06-04 10:31:44] 2025-06-04 15:31:22,997 | INFO     | transferring file log.45006595._054603.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6678390152/log.45006595._054603.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 10:31:44] 2025-06-04 15:31:22,997 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6678390152/log.45006595._054603.job.log.tgz.1 /var/lib/boinc/slots/1/log.45006595._054603.job
[2025-06-04 10:31:44] 2025-06-04 15:31:23,007 | INFO     | adding to output.list: log.45006595._054603.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/9a/log.45006595._054603.job.log.tg
[2025-06-04 10:31:44] 2025-06-04 15:31:23,007 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:31:44] 2025-06-04 15:31:23,007 | INFO     | summary of transferred files:
[2025-06-04 10:31:44] 2025-06-04 15:31:23,007 | INFO     |  -- lfn=log.45006595._054603.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:31:44] 2025-06-04 15:31:23,007 | INFO     | stage-out finished correctly
[2025-06-04 10:31:44] 2025-06-04 15:31:23,048 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:31:44] 2025-06-04 15:31:23,915 | INFO     | job 6678390152 has state=finished
[2025-06-04 10:31:44] 2025-06-04 15:31:23,916 | INFO     | preparing for final server update for job 6678390152 in state='finished'
[2025-06-04 10:31:44] 2025-06-04 15:31:23,916 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:31:44] 2025-06-04 15:31:23,916 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:31:44] 2025-06-04 15:31:23,916 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:31:44] 2025-06-04 15:31:23,916 | INFO     | job 6678390152 has finished - writing final server update
[2025-06-04 10:31:44] 2025-06-04 15:31:23,916 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:31:44] 2025-06-04 15:31:23,917 | INFO     | executing command: lscpu
[2025-06-04 10:31:44] 2025-06-04 15:31:23,936 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:31:44] 2025-06-04 15:31:24,345 | INFO     | monitor loop #135: job 0:6678390152 is in state 'finished'
[2025-06-04 10:31:44] 2025-06-04 15:31:24,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:31:44] 2025-06-04 15:31:26,846 | INFO     | monitor loop #136: job 0:6678390152 is in state 'finished'
[2025-06-04 10:31:44] 2025-06-04 15:31:26,846 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:31:44] 2025-06-04 15:31:29,349 | INFO     | monitor loop #137: job 0:6678390152 is in state 'finished'
[2025-06-04 10:31:44] 2025-06-04 15:31:29,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:31:44] 2025-06-04 15:31:29,684 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:31:44] 2025-06-04 15:31:29,684 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6678390152/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:31:44] 2025-06-04 15:31:29,685 | INFO     | extracted standard info from prmon json
[2025-06-04 10:31:44] 2025-06-04 15:31:29,685 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:31:44] 2025-06-04 15:31:29,685 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:31:44] 2025-06-04 15:31:29,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:31:44] 2025-06-04 15:31:29,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:31:44] 2025-06-04 15:31:29,686 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:31:44] 2025-06-04 15:31:29,686 | INFO     | sum of square deviations: 2865170.0
[2025-06-04 10:31:44] 2025-06-04 15:31:29,686 | INFO     | sum of deviations: -659085480.0
[2025-06-04 10:31:44] 2025-06-04 15:31:29,686 | INFO     | mean x: 1749050318.0
[2025-06-04 10:31:44] 2025-06-04 15:31:29,686 | INFO     | mean y: 2811036.761904762
[2025-06-04 10:31:44] 2025-06-04 15:31:29,686 | INFO     | -- intersect: 402343219593.037
[2025-06-04 10:31:44] 2025-06-04 15:31:29,686 | INFO     | intersect: 402343219593.037
[2025-06-04 10:31:44] 2025-06-04 15:31:29,686 | INFO     | chi2: 0.008272181562159996
[2025-06-04 10:31:44] 2025-06-04 15:31:29,686 | INFO     | -- intersect: 402343219593.037
[2025-06-04 10:31:44] 2025-06-04 15:31:29,686 | INFO     | current memory leak: -230.03 B/s (using 21 data points, chi2=0.01)
[2025-06-04 10:31:44] 2025-06-04 15:31:29,687 | INFO     | ..............................
[2025-06-04 10:31:44] 2025-06-04 15:31:29,687 | INFO     | . Timing measurements:
[2025-06-04 10:31:44] 2025-06-04 15:31:29,687 | INFO     | . get job = 0 s
[2025-06-04 10:31:44] 2025-06-04 15:31:29,687 | INFO     | . initial setup = 3 s
[2025-06-04 10:31:44] 2025-06-04 15:31:29,687 | INFO     | . payload setup = 3 s
[2025-06-04 10:31:44] 2025-06-04 15:31:29,687 | INFO     | . stage-in = 0 s
[2025-06-04 10:31:44] 2025-06-04 15:31:29,687 | INFO     | . payload execution = 1676 s
[2025-06-04 10:31:44] 2025-06-04 15:31:29,687 | INFO     | . stage-out = 0 s
[2025-06-04 10:31:44] 2025-06-04 15:31:29,687 | INFO     | . log creation = 0 s
[2025-06-04 10:31:44] 2025-06-04 15:31:29,687 | INFO     | ..............................
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | 
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | job summary report
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | --------------------------------------------------
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | PanDA job id: 6678390152
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | task id: 45006595
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | errors: (none)
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | pilot state: finished 
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | transexitcode: 0
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | exeerrorcode: 0
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | exeerrordiag: 
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | exitcode: 0
[2025-06-04 10:31:44] 2025-06-04 15:31:29,728 | INFO     | exitmsg: OK
[2025-06-04 10:31:44] 2025-06-04 15:31:29,729 | INFO     | cpuconsumptiontime: 18201 s
[2025-06-04 10:31:44] 2025-06-04 15:31:29,729 | INFO     | nevents: 400
[2025-06-04 10:31:44] 2025-06-04 15:31:29,729 | INFO     | neventsw: 0
[2025-06-04 10:31:44] 2025-06-04 15:31:29,729 | INFO     | pid: 9961
[2025-06-04 10:31:44] 2025-06-04 15:31:29,729 | INFO     | pgrp: 9961
[2025-06-04 10:31:44] 2025-06-04 15:31:29,729 | INFO     | corecount: 12
[2025-06-04 10:31:44] 2025-06-04 15:31:29,729 | INFO     | event service: False
[2025-06-04 10:31:44] 2025-06-04 15:31:29,729 | INFO     | sizes: {0: 2397342, 2: 2397548, 11: 2397576, 1683: 2422390, 1685: 2431387, 1692: 2431501}
[2025-06-04 10:31:44] 2025-06-04 15:31:29,729 | INFO     | --------------------------------------------------
[2025-06-04 10:31:44] 2025-06-04 15:31:29,729 | INFO     | 
[2025-06-04 10:31:44] 2025-06-04 15:31:29,729 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-04 10:31:44] 2025-06-04 15:31:29,741 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,741 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | job 6678390152 has completed (purged errors)
[2025-06-04 10:31:44] 2025-06-04 15:31:29,742 | INFO     | overall cleanup function is called
[2025-06-04 10:31:44] 2025-06-04 15:31:30,750 | INFO     | --- collectZombieJob: --- 10, [9961]
[2025-06-04 10:31:44] 2025-06-04 15:31:30,750 | INFO     | zombie collector waiting for pid 9961
[2025-06-04 10:31:44] 2025-06-04 15:31:30,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:31:44] 2025-06-04 15:31:30,750 | INFO     | collected zombie processes
[2025-06-04 10:31:44] 2025-06-04 15:31:30,750 | INFO     | will attempt to kill all subprocesses of pid=9961
[2025-06-04 10:31:44] 2025-06-04 15:31:30,810 | INFO     | process IDs to be killed: [9961] (in reverse order)
[2025-06-04 10:31:44] 2025-06-04 15:31:30,839 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:31:44] 2025-06-04 15:31:30,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:31:44] 2025-06-04 15:31:30,841 | INFO     | did not find any defunct processes belonging to 9961
[2025-06-04 10:31:44] 2025-06-04 15:31:30,843 | INFO     | did not find any defunct processes belonging to 9961
[2025-06-04 10:31:44] 2025-06-04 15:31:30,843 | INFO     | ready for new job
[2025-06-04 10:31:44] 2025-06-04 15:31:30,843 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:31:44] 2025-06-04 15:31:30,845 | INFO     | **************************************
[2025-06-04 10:31:44] 2025-06-04 15:31:30,845 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:31:44] 2025-06-04 15:31:30,845 | INFO     | **************************************
[2025-06-04 10:31:44] 2025-06-04 15:31:30,845 | INFO     | 
[2025-06-04 10:31:44] 2025-06-04 15:31:30,846 | INFO     | architecture information:
[2025-06-04 10:31:44] 2025-06-04 15:31:30,846 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:31:44] 2025-06-04 15:31:30,855 | INFO     | cat /etc/os-release:
[2025-06-04 10:31:44] NAME="CentOS Linux"
[2025-06-04 10:31:44] VERSION="7 (Core)"
[2025-06-04 10:31:44] ID="centos"
[2025-06-04 10:31:44] ID_LIKE="rhel fedora"
[2025-06-04 10:31:44] VERSION_ID="7"
[2025-06-04 10:31:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:31:44] ANSI_COLOR="0;31"
[2025-06-04 10:31:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:31:44] HOME_URL="https://www.centos.org/"
[2025-06-04 10:31:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:31:44] 
[2025-06-04 10:31:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:31:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:31:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:31:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:31:44] 
[2025-06-04 10:31:44] 2025-06-04 15:31:30,856 | INFO     | **************************************
[2025-06-04 10:31:44] 2025-06-04 15:31:31,358 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-04 10:31:44] 2025-06-04 15:31:31,370 | INFO     | sufficient remaining disk space (3889090789376 B)
[2025-06-04 10:31:44] 2025-06-04 15:31:31,370 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:31:44] 2025-06-04 15:31:31,370 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:31:44] 2025-06-04 15:31:31,370 | INFO     | update_server=False
[2025-06-04 10:31:44] 2025-06-04 15:31:31,370 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:31:44] 2025-06-04 15:31:31,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:31:44] 2025-06-04 15:31:31,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:31:44] 2025-06-04 15:31:31,429 | INFO     | all job control threads have been joined
[2025-06-04 10:31:44] 2025-06-04 15:31:31,625 | INFO     | PID=2958 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 10:31:44] 2025-06-04 15:31:31,625 | INFO     | .. there are 2 such processes running
[2025-06-04 10:31:44] 2025-06-04 15:31:31,625 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:31:44] 2025-06-04 15:31:31,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:31:44] 2025-06-04 15:31:31,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:31:44] 2025-06-04 15:31:31,852 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:31:44] 2025-06-04 15:31:31,852 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:31:44] 2025-06-04 15:31:31,852 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:31:44] 2025-06-04 15:31:31,852 | INFO     | will abort loop
[2025-06-04 10:31:44] 2025-06-04 15:31:31,930 | INFO     | all data control threads have been joined
[2025-06-04 10:31:44] 2025-06-04 15:31:31,986 | INFO     | all payload control threads have been joined
[2025-06-04 10:31:44] 2025-06-04 15:31:32,374 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:32,374 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:32,422 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:32,434 | INFO     | [job] control thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:32,646 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:32,754 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:32,857 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:32,934 | INFO     | [data] control thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:32,990 | INFO     | [payload] control thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:33,308 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:33,374 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:33,430 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:33,430 | INFO     | [job] validate thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:33,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:31:44] 2025-06-04 15:31:33,642 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:33,654 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:37,595 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:31:44] 2025-06-04 15:31:39,019 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139732165330752)>', '<ExcThread(monitor, started 139731811669760)>']
[2025-06-04 10:31:44] 2025-06-04 15:31:39,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:31:44] 2025-06-04 15:31:39,659 | INFO     | [monitor] control thread has ended
[2025-06-04 10:31:44] 2025-06-04 15:31:44,042 | INFO     | all workflow threads have been joined
[2025-06-04 10:31:44] 2025-06-04 15:31:44,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:31:44] 2025-06-04 15:31:44,042 | INFO     | traces error code: 0
[2025-06-04 10:31:44] 2025-06-04 15:31:44,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:31:44] 2025-06-04 15:31:44,103 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:31:44] 2025-06-04 15:31:44,104 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:31:44] 2025-06-04 15:31:44,105 [wrapper] pilotpid: 2958
[2025-06-04 10:31:44] 2025-06-04 15:31:44,107 [wrapper] Pilot exit status: 0
[2025-06-04 10:31:44] 2025-06-04 15:31:44,112 [wrapper] pandaids: 6678390152
[2025-06-04 10:31:44] 2025-06-04 15:31:44,131 [wrapper] cleanup supervisor_pilot 13169 2959
[2025-06-04 10:31:44] 2025-06-04 15:31:44,133 [wrapper] Test setup, not cleaning
[2025-06-04 10:31:44] 2025-06-04 15:31:44,134 [wrapper] apfmon messages muted
[2025-06-04 10:31:44] 2025-06-04 15:31:44,136 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:31:44] 2025-06-04 15:31:44,137 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:31:44]  *** Error codes and diagnostics ***
[2025-06-04 10:31:44]     "exeErrorCode": 0,
[2025-06-04 10:31:44]     "exeErrorDiag": "",
[2025-06-04 10:31:44]     "pilotErrorCode": 0,
[2025-06-04 10:31:44]     "pilotErrorDiag": "",
[2025-06-04 10:31:44]  *** Listing of results directory ***
[2025-06-04 10:31:44] total 391008
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc    495897 Jun  4 00:59 pilot3.tar.gz
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:45 queuedata.json
[2025-06-04 10:31:44] -rwx------ 1 boinc boinc     37140 Jun  4 01:45 runpilot2-wrapper.sh
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc       100 Jun  4 10:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:31:44] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 10:02 run_atlas
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc       105 Jun  4 10:02 job.xml
[2025-06-04 10:31:44] -rw-r--r-- 2 boinc boinc     15093 Jun  4 10:02 start_atlas.sh
[2025-06-04 10:31:44] drwxrwx--x 1 boinc boinc        76 Jun  4 10:02 shared
[2025-06-04 10:31:44] -rw-r--r-- 2 boinc boinc    508877 Jun  4 10:02 input.tar.gz
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc     10044 Jun  4 10:02 init_data.xml
[2025-06-04 10:31:44] -rw-r--r-- 2 boinc boinc 217133782 Jun  4 10:02 EVNT.45006593._002185.pool.root.1
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc         0 Jun  4 10:02 boinc_lockfile
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc      2525 Jun  4 10:02 pandaJob.out
[2025-06-04 10:31:44] -rw------- 1 boinc boinc    987207 Jun  4 10:03 agis_schedconf.cvmfs.json
[2025-06-04 10:31:44] -rw------- 1 boinc boinc   1598969 Jun  4 10:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:31:44] drwx------ 1 boinc boinc       368 Jun  4 10:03 pilot3
[2025-06-04 10:31:44] -rw------- 1 boinc boinc 178386561 Jun  4 10:31 HITS.45006595._054603.pool.root.1
[2025-06-04 10:31:44] -rw------- 1 boinc boinc        95 Jun  4 10:31 pilot_heartbeat.json
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc        27 Jun  4 10:31 wrapper_checkpoint.txt
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc      8192 Jun  4 10:31 boinc_mmap_file
[2025-06-04 10:31:44] -rw------- 1 boinc boinc      1025 Jun  4 10:31 memory_monitor_summary.json
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc       529 Jun  4 10:31 boinc_task_state.xml
[2025-06-04 10:31:44] -rw------- 1 boinc boinc    322557 Jun  4 10:31 log.45006595._054603.job.log.tgz.1
[2025-06-04 10:31:44] -rw------- 1 boinc boinc      7693 Jun  4 10:31 heartbeat.json
[2025-06-04 10:31:44] -rw------- 1 boinc boinc      4932 Jun  4 10:31 pilotlog.txt
[2025-06-04 10:31:44] -rw------- 1 boinc boinc    203264 Jun  4 10:31 log.45006595._054603.job.log.1
[2025-06-04 10:31:44] -rw------- 1 boinc boinc       357 Jun  4 10:31 output.list
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc       620 Jun  4 10:31 runtime_log
[2025-06-04 10:31:44] -rw------- 1 boinc boinc    542720 Jun  4 10:31 result.tar.gz
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc      8683 Jun  4 10:31 runtime_log.err
[2025-06-04 10:31:44] -rw------- 1 boinc boinc       653 Jun  4 10:31 FseKDmw3wg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPanKDm7Pygum.diag
[2025-06-04 10:31:44] -rw-r--r-- 1 boinc boinc     21196 Jun  4 10:31 stderr.txt
[2025-06-04 10:31:44] HITS file was successfully produced:
[2025-06-04 10:31:44] -rw------- 1 boinc boinc 178386561 Jun  4 10:31 shared/HITS.pool.root.1
[2025-06-04 10:31:44]  *** Contents of shared directory: ***
[2025-06-04 10:31:44] total 387304
[2025-06-04 10:31:44] -rw-r--r-- 2 boinc boinc     15093 Jun  4 10:02 start_atlas.sh
[2025-06-04 10:31:44] -rw-r--r-- 2 boinc boinc    508877 Jun  4 10:02 input.tar.gz
[2025-06-04 10:31:44] -rw-r--r-- 2 boinc boinc 217133782 Jun  4 10:02 ATLAS.root_0
[2025-06-04 10:31:44] -rw------- 1 boinc boinc 178386561 Jun  4 10:31 HITS.pool.root.1
[2025-06-04 10:31:44] -rw------- 1 boinc boinc    542720 Jun  4 10:31 result.tar.gz
10:31:45 (31447): run_atlas exited; CPU time 18208.872365
10:31:45 (31447): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN