Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:35:55 (27038): wrapper (7.7.26015): starting
09:35:55 (27038): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 09:35:55] Arguments: --nthreads 12
[2025-06-04 09:35:55] Threads: 12
[2025-06-04 09:35:55] Checking for CVMFS
[2025-06-04 09:35:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:35:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:35:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:35:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:35:56] 2.10.0.0 29567 2637 111528 146783 2 187 15047566 16777217 878 130560 0 10768587 99.998 629049 6832 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-04 09:35:56] CVMFS is ok
[2025-06-04 09:35:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:35:56] Checking for apptainer binary...
[2025-06-04 09:35:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:35:56] Running /usr/bin/apptainer --version
[2025-06-04 09:35:56] apptainer version 1.3.6-150600.4.9.1
[2025-06-04 09:35:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:35:56] boinc-runner
[2025-06-04 09:35:56] apptainer works
[2025-06-04 09:35:56] Set ATHENA_PROC_NUMBER=12
[2025-06-04 09:35:56] Set ATHENA_CORE_NUMBER=12
[2025-06-04 09:35:56] Starting ATLAS job with PandaID=6678390151
[2025-06-04 09:35:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:04:11]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:04:11]  status_code=0
[2025-06-04 10:04:11]  storage_token=
[2025-06-04 10:04:11]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678390151/log.45006595._054602.job.log.tgz.1
[2025-06-04 10:04:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/52/log.45006595._054602.job.log.tgz.1
[2025-06-04 10:04:11]  workdir=None
[2025-06-04 10:04:11] ]
[2025-06-04 10:04:11] 2025-06-04 15:03:45,761 | INFO     | transferring file log.45006595._054602.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678390151/log.45006595._054602.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 10:04:11] 2025-06-04 15:03:45,761 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678390151/log.45006595._054602.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._054602.job
[2025-06-04 10:04:11] 2025-06-04 15:03:45,774 | INFO     | adding to output.list: log.45006595._054602.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/52/log.45006595._054602.job.log.tg
[2025-06-04 10:04:11] 2025-06-04 15:03:45,775 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:04:11] 2025-06-04 15:03:45,775 | INFO     | summary of transferred files:
[2025-06-04 10:04:11] 2025-06-04 15:03:45,775 | INFO     |  -- lfn=log.45006595._054602.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:04:11] 2025-06-04 15:03:45,775 | INFO     | stage-out finished correctly
[2025-06-04 10:04:11] 2025-06-04 15:03:47,665 | WARNING  | process 5627 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:04:11] 2025-06-04 15:03:47,665 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678390151/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:04:11] 2025-06-04 15:03:47,665 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678390151/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:04:11] 2025-06-04 15:03:47,665 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3839073 B
[2025-06-04 10:04:11] 2025-06-04 15:03:47,665 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15781 B
[2025-06-04 10:04:11] 2025-06-04 15:03:47,666 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 10:04:11] 2025-06-04 15:03:47,673 | INFO     | sufficient remaining disk space (3889222909952 B)
[2025-06-04 10:04:11] 2025-06-04 15:03:47,674 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 10:04:11] 2025-06-04 15:03:47,674 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-6678390151: 4117350 B (within 2537553920 B limit)
[2025-06-04 10:04:11] 2025-06-04 15:03:47,675 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-6678390151/HITS.45006595._054602.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 10:04:11] 2025-06-04 15:03:47,675 | INFO     | total size of present files: 0 B (workdir size: 4117350 B)
[2025-06-04 10:04:11] 2025-06-04 15:03:47,675 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6678390151/HITS.45006595._054602.pool.root.1 since it does not exist
[2025-06-04 10:04:11] 2025-06-04 15:03:47,709 | INFO     | number of running child processes to parent process 5627: 1
[2025-06-04 10:04:11] 2025-06-04 15:03:47,709 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:04:11] 2025-06-04 15:03:49,030 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:04:11] 2025-06-04 15:03:49,809 | INFO     | job 6678390151 has state=finished
[2025-06-04 10:04:11] 2025-06-04 15:03:49,809 | INFO     | preparing for final server update for job 6678390151 in state='finished'
[2025-06-04 10:04:11] 2025-06-04 15:03:49,809 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:04:11] 2025-06-04 15:03:49,809 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:04:11] 2025-06-04 15:03:49,809 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:04:11] 2025-06-04 15:03:49,809 | INFO     | job 6678390151 has finished - writing final server update
[2025-06-04 10:04:11] 2025-06-04 15:03:49,809 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:04:11] 2025-06-04 15:03:49,810 | INFO     | executing command: lscpu
[2025-06-04 10:04:11] 2025-06-04 15:03:49,837 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:04:11] 2025-06-04 15:03:50,212 | INFO     | monitor loop #131: job 0:6678390151 is in state 'finished'
[2025-06-04 10:04:11] 2025-06-04 15:03:50,212 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:04:11] 2025-06-04 15:03:51,907 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:04:11] 2025-06-04 15:03:51,907 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678390151/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:04:11] 2025-06-04 15:03:51,908 | INFO     | extracted standard info from prmon json
[2025-06-04 10:04:11] 2025-06-04 15:03:51,908 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:04:11] 2025-06-04 15:03:51,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:04:11] 2025-06-04 15:03:51,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:04:11] 2025-06-04 15:03:51,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:04:11] 2025-06-04 15:03:51,909 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:04:11] 2025-06-04 15:03:51,909 | INFO     | sum of square deviations: 2474465.0
[2025-06-04 10:04:11] 2025-06-04 15:03:51,909 | INFO     | sum of deviations: 70196360.0
[2025-06-04 10:04:11] 2025-06-04 15:03:51,909 | INFO     | mean x: 1749048665.5
[2025-06-04 10:04:11] 2025-06-04 15:03:51,909 | INFO     | mean y: 2911385.2
[2025-06-04 10:04:11] 2025-06-04 15:03:51,909 | INFO     | -- intersect: -49614622013.315475
[2025-06-04 10:04:11] 2025-06-04 15:03:51,909 | INFO     | intersect: -49614622013.315475
[2025-06-04 10:04:11] 2025-06-04 15:03:51,909 | INFO     | chi2: 1.964862804982635e-05
[2025-06-04 10:04:11] 2025-06-04 15:03:51,910 | INFO     | -- intersect: -49614622013.315475
[2025-06-04 10:04:11] 2025-06-04 15:03:51,910 | INFO     | current memory leak: 28.37 B/s (using 20 data points, chi2=0.00)
[2025-06-04 10:04:11] 2025-06-04 15:03:51,910 | INFO     | ..............................
[2025-06-04 10:04:11] 2025-06-04 15:03:51,910 | INFO     | . Timing measurements:
[2025-06-04 10:04:11] 2025-06-04 15:03:51,910 | INFO     | . get job = 0 s
[2025-06-04 10:04:11] 2025-06-04 15:03:51,910 | INFO     | . initial setup = 2 s
[2025-06-04 10:04:11] 2025-06-04 15:03:51,910 | INFO     | . payload setup = 3 s
[2025-06-04 10:04:11] 2025-06-04 15:03:51,910 | INFO     | . stage-in = 0 s
[2025-06-04 10:04:11] 2025-06-04 15:03:51,911 | INFO     | . payload execution = 1642 s
[2025-06-04 10:04:11] 2025-06-04 15:03:51,911 | INFO     | . stage-out = 0 s
[2025-06-04 10:04:11] 2025-06-04 15:03:51,911 | INFO     | . log creation = 0 s
[2025-06-04 10:04:11] 2025-06-04 15:03:51,911 | INFO     | ..............................
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | 
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | job summary report
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | --------------------------------------------------
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | PanDA job id: 6678390151
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | task id: 45006595
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | errors: (none)
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | pilot state: finished 
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | transexitcode: 0
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | exeerrorcode: 0
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | exeerrordiag: 
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | exitcode: 0
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | exitmsg: OK
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | cpuconsumptiontime: 17883 s
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | nevents: 400
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | neventsw: 0
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | pid: 5627
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | pgrp: 5627
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | corecount: 12
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | event service: False
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | sizes: {0: 2396514, 1: 2397370, 3: 2397576, 11: 2397604, 1650: 2422390, 1651: 2431331, 1654: 2431543, 1657: 2431713}
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | --------------------------------------------------
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | 
[2025-06-04 10:04:11] 2025-06-04 15:03:51,936 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,947 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,947 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,947 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:04:11] 2025-06-04 15:03:51,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,947 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:04:11] 2025-06-04 15:03:51,947 | INFO     | job 6678390151 has completed (purged errors)
[2025-06-04 10:04:11] 2025-06-04 15:03:51,947 | INFO     | overall cleanup function is called
[2025-06-04 10:04:11] 2025-06-04 15:03:52,954 | INFO     | --- collectZombieJob: --- 10, [5627]
[2025-06-04 10:04:11] 2025-06-04 15:03:52,954 | INFO     | zombie collector waiting for pid 5627
[2025-06-04 10:04:11] 2025-06-04 15:03:52,954 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:04:11] 2025-06-04 15:03:52,954 | INFO     | collected zombie processes
[2025-06-04 10:04:11] 2025-06-04 15:03:52,954 | INFO     | will attempt to kill all subprocesses of pid=5627
[2025-06-04 10:04:11] 2025-06-04 15:03:52,989 | INFO     | process IDs to be killed: [5627] (in reverse order)
[2025-06-04 10:04:11] 2025-06-04 15:03:53,013 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:04:11] 2025-06-04 15:03:53,013 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:04:11] 2025-06-04 15:03:53,016 | INFO     | did not find any defunct processes belonging to 5627
[2025-06-04 10:04:11] 2025-06-04 15:03:53,019 | INFO     | did not find any defunct processes belonging to 5627
[2025-06-04 10:04:11] 2025-06-04 15:03:53,019 | INFO     | ready for new job
[2025-06-04 10:04:11] 2025-06-04 15:03:53,019 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:04:11] 2025-06-04 15:03:53,019 | INFO     | **************************************
[2025-06-04 10:04:11] 2025-06-04 15:03:53,019 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:04:11] 2025-06-04 15:03:53,020 | INFO     | **************************************
[2025-06-04 10:04:11] 2025-06-04 15:03:53,020 | INFO     | 
[2025-06-04 10:04:11] 2025-06-04 15:03:53,020 | INFO     | architecture information:
[2025-06-04 10:04:11] 2025-06-04 15:03:53,020 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:04:11] 2025-06-04 15:03:53,026 | INFO     | cat /etc/os-release:
[2025-06-04 10:04:11] NAME="CentOS Linux"
[2025-06-04 10:04:11] VERSION="7 (Core)"
[2025-06-04 10:04:11] ID="centos"
[2025-06-04 10:04:11] ID_LIKE="rhel fedora"
[2025-06-04 10:04:11] VERSION_ID="7"
[2025-06-04 10:04:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:04:11] ANSI_COLOR="0;31"
[2025-06-04 10:04:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:04:11] HOME_URL="https://www.centos.org/"
[2025-06-04 10:04:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:04:11] 
[2025-06-04 10:04:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:04:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:04:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:04:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:04:11] 
[2025-06-04 10:04:11] 2025-06-04 15:03:53,026 | INFO     | **************************************
[2025-06-04 10:04:11] 2025-06-04 15:03:53,529 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 10:04:11] 2025-06-04 15:03:53,540 | INFO     | sufficient remaining disk space (3889222909952 B)
[2025-06-04 10:04:11] 2025-06-04 15:03:53,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:04:11] 2025-06-04 15:03:53,540 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:04:11] 2025-06-04 15:03:53,540 | INFO     | update_server=False
[2025-06-04 10:04:11] 2025-06-04 15:03:53,540 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:04:11] 2025-06-04 15:03:53,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:04:11] 2025-06-04 15:03:53,541 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:04:11] 2025-06-04 15:03:53,541 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:04:11] 2025-06-04 15:03:53,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:04:11] 2025-06-04 15:03:53,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:04:11] 2025-06-04 15:03:53,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:04:11] 2025-06-04 15:03:53,717 | INFO     | aborting loop
[2025-06-04 10:04:11] 2025-06-04 15:03:53,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:04:11] 2025-06-04 15:03:54,014 | INFO     | all data control threads have been joined
[2025-06-04 10:04:11] 2025-06-04 15:03:54,493 | INFO     | all payload control threads have been joined
[2025-06-04 10:04:11] 2025-06-04 15:03:54,546 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:54,546 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:54,694 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:54,718 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:55,018 | INFO     | [data] control thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:55,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:04:11] 2025-06-04 15:03:55,147 | INFO     | [job] validate thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:55,174 | INFO     | all job control threads have been joined
[2025-06-04 10:04:11] 2025-06-04 15:03:55,314 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:55,331 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:55,474 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:55,498 | INFO     | [payload] control thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:55,818 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:55,878 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:56,004 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:56,179 | INFO     | [job] control thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:03:59,080 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:04:04,089 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:04:11] 2025-06-04 15:04:05,094 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:04:11] 2025-06-04 15:04:06,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140396168578880)>', '<ExcThread(monitor, started 140395660945152)>']
[2025-06-04 10:04:11] 2025-06-04 15:04:06,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:04:11] 2025-06-04 15:04:06,592 | INFO     | [monitor] control thread has ended
[2025-06-04 10:04:11] 2025-06-04 15:04:11,182 | INFO     | all workflow threads have been joined
[2025-06-04 10:04:11] 2025-06-04 15:04:11,182 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:04:11] 2025-06-04 15:04:11,182 | INFO     | traces error code: 0
[2025-06-04 10:04:11] 2025-06-04 15:04:11,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:04:11] 2025-06-04 15:04:11,235 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:04:11] 2025-06-04 15:04:11,237 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:04:11] 2025-06-04 15:04:11,239 [wrapper] pilotpid: 30931
[2025-06-04 10:04:11] 2025-06-04 15:04:11,241 [wrapper] Pilot exit status: 0
[2025-06-04 10:04:11] 2025-06-04 15:04:11,247 [wrapper] pandaids: 6678390151
[2025-06-04 10:04:11] 2025-06-04 15:04:11,262 [wrapper] cleanup supervisor_pilot 21493 30932
[2025-06-04 10:04:11] 2025-06-04 15:04:11,264 [wrapper] Test setup, not cleaning
[2025-06-04 10:04:11] 2025-06-04 15:04:11,266 [wrapper] apfmon messages muted
[2025-06-04 10:04:11] 2025-06-04 15:04:11,268 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:04:11] 2025-06-04 15:04:11,269 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:04:11]  *** Error codes and diagnostics ***
[2025-06-04 10:04:11]     "exeErrorCode": 0,
[2025-06-04 10:04:11]     "exeErrorDiag": "",
[2025-06-04 10:04:11]     "pilotErrorCode": 0,
[2025-06-04 10:04:11]     "pilotErrorDiag": "",
[2025-06-04 10:04:11]  *** Listing of results directory ***
[2025-06-04 10:04:11] total 392148
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc    495897 Jun  4 00:59 pilot3.tar.gz
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:45 queuedata.json
[2025-06-04 10:04:11] -rwx------ 1 boinc boinc     37140 Jun  4 01:45 runpilot2-wrapper.sh
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc       100 Jun  4 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:04:11] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 09:35 run_atlas
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc       105 Jun  4 09:35 job.xml
[2025-06-04 10:04:11] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:35 start_atlas.sh
[2025-06-04 10:04:11] drwxrwx--x 1 boinc boinc        76 Jun  4 09:35 shared
[2025-06-04 10:04:11] -rw-r--r-- 2 boinc boinc    508880 Jun  4 09:35 input.tar.gz
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc     10044 Jun  4 09:35 init_data.xml
[2025-06-04 10:04:11] -rw-r--r-- 2 boinc boinc 217133782 Jun  4 09:35 EVNT.45006593._002185.pool.root.1
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc         0 Jun  4 09:35 boinc_lockfile
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc      2525 Jun  4 09:35 pandaJob.out
[2025-06-04 10:04:11] -rw------- 1 boinc boinc    987207 Jun  4 09:36 agis_schedconf.cvmfs.json
[2025-06-04 10:04:11] -rw------- 1 boinc boinc   1598969 Jun  4 09:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:04:11] drwx------ 1 boinc boinc       368 Jun  4 09:36 pilot3
[2025-06-04 10:04:11] -rw------- 1 boinc boinc        95 Jun  4 10:03 pilot_heartbeat.json
[2025-06-04 10:04:11] -rw------- 1 boinc boinc 179560272 Jun  4 10:03 HITS.45006595._054602.pool.root.1
[2025-06-04 10:04:11] -rw------- 1 boinc boinc      1023 Jun  4 10:03 memory_monitor_summary.json
[2025-06-04 10:04:11] -rw------- 1 boinc boinc    321182 Jun  4 10:03 log.45006595._054602.job.log.tgz.1
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc       529 Jun  4 10:03 boinc_task_state.xml
[2025-06-04 10:04:11] -rw------- 1 boinc boinc      7679 Jun  4 10:03 heartbeat.json
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc        27 Jun  4 10:03 wrapper_checkpoint.txt
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc      8192 Jun  4 10:03 boinc_mmap_file
[2025-06-04 10:04:11] -rw------- 1 boinc boinc      4550 Jun  4 10:04 pilotlog.txt
[2025-06-04 10:04:11] -rw------- 1 boinc boinc    200174 Jun  4 10:04 log.45006595._054602.job.log.1
[2025-06-04 10:04:11] -rw------- 1 boinc boinc       357 Jun  4 10:04 output.list
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc       620 Jun  4 10:04 runtime_log
[2025-06-04 10:04:11] -rw------- 1 boinc boinc    542720 Jun  4 10:04 result.tar.gz
[2025-06-04 10:04:11] -rw------- 1 boinc boinc       651 Jun  4 10:04 z4bKDmw3wg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOanKDmWtZMim.diag
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc      8683 Jun  4 10:04 runtime_log.err
[2025-06-04 10:04:11] -rw-r--r-- 1 boinc boinc     21974 Jun  4 10:04 stderr.txt
[2025-06-04 10:04:11] HITS file was successfully produced:
[2025-06-04 10:04:11] -rw------- 1 boinc boinc 179560272 Jun  4 10:03 shared/HITS.pool.root.1
[2025-06-04 10:04:11]  *** Contents of shared directory: ***
[2025-06-04 10:04:11] total 388448
[2025-06-04 10:04:11] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:35 start_atlas.sh
[2025-06-04 10:04:11] -rw-r--r-- 2 boinc boinc    508880 Jun  4 09:35 input.tar.gz
[2025-06-04 10:04:11] -rw-r--r-- 2 boinc boinc 217133782 Jun  4 09:35 ATLAS.root_0
[2025-06-04 10:04:11] -rw------- 1 boinc boinc 179560272 Jun  4 10:03 HITS.pool.root.1
[2025-06-04 10:04:11] -rw------- 1 boinc boinc    542720 Jun  4 10:04 result.tar.gz
10:04:12 (27038): run_atlas exited; CPU time 17890.314385
10:04:12 (27038): called boinc_finish(0)

</stderr_txt>
]]>

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