Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:03:58 (3801366): wrapper (7.7.26015): starting
01:03:58 (3801366): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 01:03:58] Arguments: --nthreads 12
[2025-06-05 01:03:58] Threads: 12
[2025-06-05 01:03:58] Checking for CVMFS
[2025-06-05 01:03:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:03:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:03:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:03:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:03:59] 2.12.7.0 8631 8124 95440 146797 1 187 43169155 46080000 922 130560 0 11647548 99.997 964477 16550 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-05 01:03:59] CVMFS is ok
[2025-06-05 01:03:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:03:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:03:59] Further information can be found at the LHC@home message board.
[2025-06-05 01:03:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:03:59] Checking for apptainer binary...
[2025-06-05 01:03:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:03:59] Running /usr/bin/apptainer --version
[2025-06-05 01:03:59] apptainer version 1.4.1-1.el9
[2025-06-05 01:03:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:03:59] gpu01.farm.particle.cz
[2025-06-05 01:03:59] apptainer works
[2025-06-05 01:03:59] Set ATHENA_PROC_NUMBER=12
[2025-06-05 01:03:59] Set ATHENA_CORE_NUMBER=12
[2025-06-05 01:03:59] Starting ATLAS job with PandaID=6678365376
[2025-06-05 01:03:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:41:33]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:41:33]  filesize=354039
[2025-06-05 01:41:33]  filetype=log
[2025-06-05 01:41:33]  guid=1bd1c91e-aeb6-4209-bbff-8d1f24e11519
[2025-06-05 01:41:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 01:41:33]  is_altstaged=None
[2025-06-05 01:41:33]  is_tar=False
[2025-06-05 01:41:33]  lfn=log.45006595._054407.job.log.tgz.1
[2025-06-05 01:41:33]  mtime=0
[2025-06-05 01:41:33]  protocol_id=None
[2025-06-05 01:41:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 01:41:33]  replicas=None
[2025-06-05 01:41:33]  scope=mc23_13p6TeV
[2025-06-05 01:41:33]  status=None
[2025-06-05 01:41:33]  status_code=0
[2025-06-05 01:41:33]  storage_token=
[2025-06-05 01:41:33]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6678365376/log.45006595._054407.job.log.tgz.1
[2025-06-05 01:41:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/1b/log.45006595._054407.job.log.tgz.1
[2025-06-05 01:41:33]  workdir=None
[2025-06-05 01:41:33] ]
[2025-06-05 01:41:33] 2025-06-04 23:41:17,205 | INFO     | transferring file log.45006595._054407.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6678365376/log.45006595._054407.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-05 01:41:33] 2025-06-04 23:41:17,205 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6678365376/log.45006595._054407.job.log.tgz.1 /var/lib/boinc/slots/1/log.45006595._054407.job
[2025-06-05 01:41:33] 2025-06-04 23:41:17,219 | INFO     | adding to output.list: log.45006595._054407.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/1b/log.45006595._054407.job.log.tg
[2025-06-05 01:41:33] 2025-06-04 23:41:17,219 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 01:41:33] 2025-06-04 23:41:17,219 | INFO     | summary of transferred files:
[2025-06-05 01:41:33] 2025-06-04 23:41:17,219 | INFO     |  -- lfn=log.45006595._054407.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 01:41:33] 2025-06-04 23:41:17,219 | INFO     | stage-out finished correctly
[2025-06-05 01:41:33] 2025-06-04 23:41:17,270 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 01:41:33] 2025-06-04 23:41:17,599 | INFO     | monitor loop #174: job 0:6678365376 is in state 'finished'
[2025-06-05 01:41:33] 2025-06-04 23:41:17,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:41:33] 2025-06-04 23:41:19,202 | INFO     | job 6678365376 has state=finished
[2025-06-05 01:41:33] 2025-06-04 23:41:19,202 | INFO     | preparing for final server update for job 6678365376 in state='finished'
[2025-06-05 01:41:33] 2025-06-04 23:41:19,203 | INFO     | this job has now completed (state=finished)
[2025-06-05 01:41:33] 2025-06-04 23:41:19,203 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 01:41:33] 2025-06-04 23:41:19,203 | INFO     | log transfer has been attempted: DONE
[2025-06-05 01:41:33] 2025-06-04 23:41:19,203 | INFO     | job 6678365376 has finished - writing final server update
[2025-06-05 01:41:33] 2025-06-04 23:41:19,203 | INFO     | total number of processed events: 400 (read)
[2025-06-05 01:41:33] 2025-06-04 23:41:19,205 | INFO     | executing command: lscpu
[2025-06-05 01:41:33] 2025-06-04 23:41:19,234 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:41:33] 2025-06-04 23:41:20,102 | INFO     | monitor loop #175: job 0:6678365376 is in state 'finished'
[2025-06-05 01:41:33] 2025-06-04 23:41:20,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:41:33] 2025-06-04 23:41:22,018 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:41:33] 2025-06-04 23:41:22,018 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6678365376/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:41:33] 2025-06-04 23:41:22,019 | INFO     | extracted standard info from prmon json
[2025-06-05 01:41:33] 2025-06-04 23:41:22,019 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:41:33] 2025-06-04 23:41:22,019 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:41:33] 2025-06-04 23:41:22,020 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:41:33] 2025-06-04 23:41:22,020 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:41:33] 2025-06-04 23:41:22,021 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:41:33] 2025-06-04 23:41:22,021 | INFO     | sum of square deviations: 8362947.5
[2025-06-05 01:41:33] 2025-06-04 23:41:22,021 | INFO     | sum of deviations: -307075799.5
[2025-06-05 01:41:33] 2025-06-04 23:41:22,021 | INFO     | mean x: 1749079456.5
[2025-06-05 01:41:33] 2025-06-04 23:41:22,021 | INFO     | mean y: 2726373.3
[2025-06-05 01:41:33] 2025-06-04 23:41:22,021 | INFO     | -- intersect: 64226491079.913666
[2025-06-05 01:41:33] 2025-06-04 23:41:22,021 | INFO     | intersect: 64226491079.913666
[2025-06-05 01:41:33] 2025-06-04 23:41:22,021 | INFO     | chi2: 0.01064739986009359
[2025-06-05 01:41:33] 2025-06-04 23:41:22,021 | INFO     | -- intersect: 64226491079.913666
[2025-06-05 01:41:33] 2025-06-04 23:41:22,021 | INFO     | current memory leak: -36.72 B/s (using 30 data points, chi2=0.01)
[2025-06-05 01:41:33] 2025-06-04 23:41:22,022 | INFO     | ..............................
[2025-06-05 01:41:33] 2025-06-04 23:41:22,022 | INFO     | . Timing measurements:
[2025-06-05 01:41:33] 2025-06-04 23:41:22,022 | INFO     | . get job = 0 s
[2025-06-05 01:41:33] 2025-06-04 23:41:22,022 | INFO     | . initial setup = 1 s
[2025-06-05 01:41:33] 2025-06-04 23:41:22,022 | INFO     | . payload setup = 4 s
[2025-06-05 01:41:33] 2025-06-04 23:41:22,022 | INFO     | . stage-in = 0 s
[2025-06-05 01:41:33] 2025-06-04 23:41:22,022 | INFO     | . payload execution = 2208 s
[2025-06-05 01:41:33] 2025-06-04 23:41:22,022 | INFO     | . stage-out = 0 s
[2025-06-05 01:41:33] 2025-06-04 23:41:22,022 | INFO     | . log creation = 0 s
[2025-06-05 01:41:33] 2025-06-04 23:41:22,022 | INFO     | ..............................
[2025-06-05 01:41:33] 2025-06-04 23:41:22,099 | INFO     | 
[2025-06-05 01:41:33] 2025-06-04 23:41:22,099 | INFO     | job summary report
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | --------------------------------------------------
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | PanDA job id: 6678365376
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | task id: 45006595
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | errors: (none)
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | pilot state: finished 
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | transexitcode: 0
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | exeerrorcode: 0
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | exeerrordiag: 
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | exitcode: 0
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | exitmsg: OK
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | cpuconsumptiontime: 23039 s
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | nevents: 400
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | neventsw: 0
[2025-06-05 01:41:33] 2025-06-04 23:41:22,100 | INFO     | pid: 3811917
[2025-06-05 01:41:33] 2025-06-04 23:41:22,101 | INFO     | pgrp: 3811917
[2025-06-05 01:41:33] 2025-06-04 23:41:22,101 | INFO     | corecount: 12
[2025-06-05 01:41:33] 2025-06-04 23:41:22,101 | INFO     | event service: False
[2025-06-05 01:41:33] 2025-06-04 23:41:22,101 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 2217: 2422649, 2218: 2431646, 2223: 2431760}
[2025-06-05 01:41:33] 2025-06-04 23:41:22,101 | INFO     | --------------------------------------------------
[2025-06-05 01:41:33] 2025-06-04 23:41:22,101 | INFO     | 
[2025-06-05 01:41:33] 2025-06-04 23:41:22,101 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-05 01:41:33] 2025-06-04 23:41:22,116 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,116 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,116 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,116 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,116 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,116 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,116 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,116 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,117 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:41:33] 2025-06-04 23:41:22,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,117 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:41:33] 2025-06-04 23:41:22,117 | INFO     | job 6678365376 has completed (purged errors)
[2025-06-05 01:41:33] 2025-06-04 23:41:22,117 | INFO     | overall cleanup function is called
[2025-06-05 01:41:33] 2025-06-04 23:41:23,126 | INFO     | --- collectZombieJob: --- 10, [3811917]
[2025-06-05 01:41:33] 2025-06-04 23:41:23,126 | INFO     | zombie collector waiting for pid 3811917
[2025-06-05 01:41:33] 2025-06-04 23:41:23,126 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:41:33] 2025-06-04 23:41:23,126 | INFO     | collected zombie processes
[2025-06-05 01:41:33] 2025-06-04 23:41:23,126 | INFO     | will attempt to kill all subprocesses of pid=3811917
[2025-06-05 01:41:33] 2025-06-04 23:41:23,258 | INFO     | process IDs to be killed: [3811917] (in reverse order)
[2025-06-05 01:41:33] 2025-06-04 23:41:23,297 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:41:33] 2025-06-04 23:41:23,297 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:41:33] 2025-06-04 23:41:23,301 | INFO     | did not find any defunct processes belonging to 3811917
[2025-06-05 01:41:33] 2025-06-04 23:41:23,305 | INFO     | did not find any defunct processes belonging to 3811917
[2025-06-05 01:41:33] 2025-06-04 23:41:23,305 | INFO     | ready for new job
[2025-06-05 01:41:33] 2025-06-04 23:41:23,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:41:33] 2025-06-04 23:41:23,306 | INFO     | **************************************
[2025-06-05 01:41:33] 2025-06-04 23:41:23,306 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:41:33] 2025-06-04 23:41:23,307 | INFO     | **************************************
[2025-06-05 01:41:33] 2025-06-04 23:41:23,307 | INFO     | 
[2025-06-05 01:41:33] 2025-06-04 23:41:23,308 | INFO     | architecture information:
[2025-06-05 01:41:33] 2025-06-04 23:41:23,309 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:41:33] 2025-06-04 23:41:23,320 | INFO     | cat /etc/os-release:
[2025-06-05 01:41:33] NAME="CentOS Linux"
[2025-06-05 01:41:33] VERSION="7 (Core)"
[2025-06-05 01:41:33] ID="centos"
[2025-06-05 01:41:33] ID_LIKE="rhel fedora"
[2025-06-05 01:41:33] VERSION_ID="7"
[2025-06-05 01:41:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:41:33] ANSI_COLOR="0;31"
[2025-06-05 01:41:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:41:33] HOME_URL="https://www.centos.org/"
[2025-06-05 01:41:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:41:33] 
[2025-06-05 01:41:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:41:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:41:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:41:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:41:33] 
[2025-06-05 01:41:33] 2025-06-04 23:41:23,320 | INFO     | **************************************
[2025-06-05 01:41:33] 2025-06-04 23:41:23,823 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-05 01:41:33] 2025-06-04 23:41:23,834 | INFO     | sufficient remaining disk space (68269637632 B)
[2025-06-05 01:41:33] 2025-06-04 23:41:23,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:41:33] 2025-06-04 23:41:23,835 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:41:33] 2025-06-04 23:41:23,835 | INFO     | update_server=False
[2025-06-05 01:41:33] 2025-06-04 23:41:23,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:41:33] 2025-06-04 23:41:23,835 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:41:33] 2025-06-04 23:41:23,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:41:33] 2025-06-04 23:41:23,835 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:41:33] 2025-06-04 23:41:23,835 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:41:33] 2025-06-04 23:41:23,836 | INFO     | aborting loop
[2025-06-05 01:41:33] 2025-06-04 23:41:23,836 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:41:33] 2025-06-04 23:41:23,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:41:33] 2025-06-04 23:41:23,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:41:33] 2025-06-04 23:41:24,308 | INFO     | all data control threads have been joined
[2025-06-05 01:41:33] 2025-06-04 23:41:24,684 | INFO     | all payload control threads have been joined
[2025-06-05 01:41:33] 2025-06-04 23:41:24,840 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:24,841 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:24,842 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:24,855 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:25,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:41:33] 2025-06-04 23:41:25,312 | INFO     | all job control threads have been joined
[2025-06-05 01:41:33] 2025-06-04 23:41:25,314 | INFO     | [data] control thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:25,659 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:25,687 | INFO     | [payload] control thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:25,923 | INFO     | [job] validate thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:25,965 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:25,977 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:26,071 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:26,105 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:26,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:26,318 | INFO     | [job] control thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:27,286 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:27,842 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:41:33] 2025-06-04 23:41:28,032 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475809871680)>', '<ExcThread(monitor, started 140474924906240)>']
[2025-06-05 01:41:33] 2025-06-04 23:41:28,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:41:33] 2025-06-04 23:41:28,862 | INFO     | [monitor] control thread has ended
[2025-06-05 01:41:33] 2025-06-04 23:41:33,057 | INFO     | all workflow threads have been joined
[2025-06-05 01:41:33] 2025-06-04 23:41:33,058 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:41:33] 2025-06-04 23:41:33,058 | INFO     | traces error code: 0
[2025-06-05 01:41:33] 2025-06-04 23:41:33,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:41:33] 2025-06-04 23:41:33,120 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:41:33] 2025-06-04 23:41:33,122 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:41:33] 2025-06-04 23:41:33,124 [wrapper] pilotpid: 3805161
[2025-06-05 01:41:33] 2025-06-04 23:41:33,126 [wrapper] Pilot exit status: 0
[2025-06-05 01:41:33] 2025-06-04 23:41:33,133 [wrapper] pandaids: 6678365376
[2025-06-05 01:41:33] 2025-06-04 23:41:33,157 [wrapper] cleanup supervisor_pilot 3854922 3805162
[2025-06-05 01:41:33] 2025-06-04 23:41:33,160 [wrapper] Test setup, not cleaning
[2025-06-05 01:41:33] 2025-06-04 23:41:33,161 [wrapper] apfmon messages muted
[2025-06-05 01:41:33] 2025-06-04 23:41:33,163 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:41:33] 2025-06-04 23:41:33,165 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:41:33]  *** Error codes and diagnostics ***
[2025-06-05 01:41:33]     "exeErrorCode": 0,
[2025-06-05 01:41:33]     "exeErrorDiag": "",
[2025-06-05 01:41:33]     "pilotErrorCode": 0,
[2025-06-05 01:41:33]     "pilotErrorDiag": "",
[2025-06-05 01:41:33]  *** Listing of results directory ***
[2025-06-05 01:41:33] total 394328
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc      5111 Jun  4 08:35 queuedata.json
[2025-06-05 01:41:33] -rwx------ 1 boinc boinc     37140 Jun  4 08:36 runpilot2-wrapper.sh
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc       100 Jun  5 01:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:41:33] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 01:03 run_atlas
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc       105 Jun  5 01:03 job.xml
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc      9445 Jun  5 01:03 init_data.xml
[2025-06-05 01:41:33] -rw-r--r-- 2 boinc boinc 217340707 Jun  5 01:03 EVNT.45006593._002177.pool.root.1
[2025-06-05 01:41:33] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:03 start_atlas.sh
[2025-06-05 01:41:33] drwxrwx--x 2 boinc boinc      4096 Jun  5 01:03 shared
[2025-06-05 01:41:33] -rw-r--r-- 2 boinc boinc    508884 Jun  5 01:03 input.tar.gz
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc         0 Jun  5 01:03 boinc_lockfile
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc      2525 Jun  5 01:03 pandaJob.out
[2025-06-05 01:41:33] -rw------- 1 boinc boinc    987032 Jun  5 01:04 agis_schedconf.cvmfs.json
[2025-06-05 01:41:33] -rw------- 1 boinc boinc   1598969 Jun  5 01:04 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:41:33] drwx------ 4 boinc boinc      4096 Jun  5 01:04 pilot3
[2025-06-05 01:41:33] -rw------- 1 boinc boinc        95 Jun  5 01:40 pilot_heartbeat.json
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc       529 Jun  5 01:40 boinc_task_state.xml
[2025-06-05 01:41:33] -rw------- 1 boinc boinc 181406236 Jun  5 01:40 HITS.45006595._054407.pool.root.1
[2025-06-05 01:41:33] -rw------- 1 boinc boinc      1013 Jun  5 01:41 memory_monitor_summary.json
[2025-06-05 01:41:33] -rw------- 1 boinc boinc    354039 Jun  5 01:41 log.45006595._054407.job.log.tgz.1
[2025-06-05 01:41:33] -rw------- 1 boinc boinc      7677 Jun  5 01:41 heartbeat.json
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:41 boinc_mmap_file
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc        27 Jun  5 01:41 wrapper_checkpoint.txt
[2025-06-05 01:41:33] -rw------- 1 boinc boinc      4476 Jun  5 01:41 pilotlog.txt
[2025-06-05 01:41:33] -rw------- 1 boinc boinc    250618 Jun  5 01:41 log.45006595._054407.job.log.1
[2025-06-05 01:41:33] -rw------- 1 boinc boinc       357 Jun  5 01:41 output.list
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:41 runtime_log
[2025-06-05 01:41:33] -rw------- 1 boinc boinc    624640 Jun  5 01:41 result.tar.gz
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc      8696 Jun  5 01:41 runtime_log.err
[2025-06-05 01:41:33] -rw------- 1 boinc boinc       658 Jun  5 01:41 iabLDmouwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3XnKDmiVTwSo.diag
[2025-06-05 01:41:33] -rw-r--r-- 1 boinc boinc     21131 Jun  5 01:41 stderr.txt
[2025-06-05 01:41:33] HITS file was successfully produced:
[2025-06-05 01:41:33] -rw------- 1 boinc boinc 181406236 Jun  5 01:40 shared/HITS.pool.root.1
[2025-06-05 01:41:33]  *** Contents of shared directory: ***
[2025-06-05 01:41:33] total 390536
[2025-06-05 01:41:33] -rw-r--r-- 2 boinc boinc 217340707 Jun  5 01:03 ATLAS.root_0
[2025-06-05 01:41:33] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:03 start_atlas.sh
[2025-06-05 01:41:33] -rw-r--r-- 2 boinc boinc    508884 Jun  5 01:03 input.tar.gz
[2025-06-05 01:41:33] -rw------- 1 boinc boinc 181406236 Jun  5 01:40 HITS.pool.root.1
[2025-06-05 01:41:33] -rw------- 1 boinc boinc    624640 Jun  5 01:41 result.tar.gz
01:41:34 (3801366): run_atlas exited; CPU time 23050.739956
01:41:34 (3801366): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN