Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:55:09 (2997127): wrapper (7.7.26015): starting
07:55:09 (2997127): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:55:09] Arguments: --nthreads 8
[2025-06-04 07:55:09] Threads: 8
[2025-06-04 07:55:09] Checking for CVMFS
[2025-06-04 07:55:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:55:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:55:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:55:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:55:09] 2.12.6.0 1685548 23262 447596 146779 0 462 26153682 32947201 10175 16776704 0 123031684 99.687 96719920 27315 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:55:09] CVMFS is ok
[2025-06-04 07:55:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:55:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:55:09] Further information can be found at the LHC@home message board.
[2025-06-04 07:55:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:55:09] Checking for apptainer binary...
[2025-06-04 07:55:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:55:09] Running /usr/bin/apptainer --version
[2025-06-04 07:55:09] apptainer version 1.4.1-1.el9
[2025-06-04 07:55:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:55:09] c6-6-8-2.aglt2.org
[2025-06-04 07:55:09] apptainer works
[2025-06-04 07:55:09] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:55:09] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:55:09] Starting ATLAS job with PandaID=6678365375
[2025-06-04 07:55:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:54:11]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:54:11]  protocol_id=None
[2025-06-04 08:54:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:54:11]  replicas=None
[2025-06-04 08:54:11]  scope=mc23_13p6TeV
[2025-06-04 08:54:11]  status=None
[2025-06-04 08:54:11]  status_code=0
[2025-06-04 08:54:11]  storage_token=
[2025-06-04 08:54:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678365375/log.45006595._054406.job.log.tgz.1
[2025-06-04 08:54:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/b9/log.45006595._054406.job.log.tgz.1
[2025-06-04 08:54:11]  workdir=None
[2025-06-04 08:54:11] ]
[2025-06-04 08:54:11] 2025-06-04 12:53:48,594 | INFO     | transferring file log.45006595._054406.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678365375/log.45006595._054406.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:54:11] 2025-06-04 12:53:48,595 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678365375/log.45006595._054406.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054406.job
[2025-06-04 08:54:11] 2025-06-04 12:53:48,609 | INFO     | adding to output.list: log.45006595._054406.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/b9/log.45006595._054406.job.log.tg
[2025-06-04 08:54:11] 2025-06-04 12:53:48,610 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:54:11] 2025-06-04 12:53:48,610 | INFO     | summary of transferred files:
[2025-06-04 08:54:11] 2025-06-04 12:53:48,610 | INFO     |  -- lfn=log.45006595._054406.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:54:11] 2025-06-04 12:53:48,610 | INFO     | stage-out finished correctly
[2025-06-04 08:54:11] 2025-06-04 12:53:48,709 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:54:11] 2025-06-04 12:53:49,181 | INFO     | job 6678365375 has state=finished
[2025-06-04 08:54:11] 2025-06-04 12:53:49,181 | INFO     | preparing for final server update for job 6678365375 in state='finished'
[2025-06-04 08:54:11] 2025-06-04 12:53:49,182 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:54:11] 2025-06-04 12:53:49,182 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:54:11] 2025-06-04 12:53:49,182 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:54:11] 2025-06-04 12:53:49,182 | INFO     | job 6678365375 has finished - writing final server update
[2025-06-04 08:54:11] 2025-06-04 12:53:49,183 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:54:11] 2025-06-04 12:53:49,200 | INFO     | executing command: lscpu
[2025-06-04 08:54:11] 2025-06-04 12:53:49,270 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:54:11] 2025-06-04 12:53:51,571 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:54:11] 2025-06-04 12:53:51,572 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678365375/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:54:11] 2025-06-04 12:53:51,572 | INFO     | extracted standard info from prmon json
[2025-06-04 08:54:11] 2025-06-04 12:53:51,573 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:54:11] 2025-06-04 12:53:51,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:54:11] 2025-06-04 12:53:51,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:54:11] 2025-06-04 12:53:51,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:54:11] 2025-06-04 12:53:51,575 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:54:11] 2025-06-04 12:53:51,575 | INFO     | sum of square deviations: 41117050.0
[2025-06-04 08:54:11] 2025-06-04 12:53:51,575 | INFO     | sum of deviations: 3780266929.000001
[2025-06-04 08:54:11] 2025-06-04 12:53:51,575 | INFO     | mean x: 1749039970.0
[2025-06-04 08:54:11] 2025-06-04 12:53:51,575 | INFO     | mean y: 2165357.7647058824
[2025-06-04 08:54:11] 2025-06-04 12:53:51,575 | INFO     | -- intersect: -160803095624.97003
[2025-06-04 08:54:11] 2025-06-04 12:53:51,575 | INFO     | intersect: -160803095624.97003
[2025-06-04 08:54:11] 2025-06-04 12:53:51,576 | INFO     | chi2: 0.855422056746077
[2025-06-04 08:54:11] 2025-06-04 12:53:51,576 | INFO     | -- intersect: -160803095624.97003
[2025-06-04 08:54:11] 2025-06-04 12:53:51,576 | INFO     | current memory leak: 91.94 B/s (using 51 data points, chi2=0.86)
[2025-06-04 08:54:11] 2025-06-04 12:53:51,576 | INFO     | ..............................
[2025-06-04 08:54:11] 2025-06-04 12:53:51,576 | INFO     | . Timing measurements:
[2025-06-04 08:54:11] 2025-06-04 12:53:51,576 | INFO     | . get job = 0 s
[2025-06-04 08:54:11] 2025-06-04 12:53:51,576 | INFO     | . initial setup = 2 s
[2025-06-04 08:54:11] 2025-06-04 12:53:51,577 | INFO     | . payload setup = 4 s
[2025-06-04 08:54:11] 2025-06-04 12:53:51,577 | INFO     | . stage-in = 0 s
[2025-06-04 08:54:11] 2025-06-04 12:53:51,577 | INFO     | . payload execution = 3487 s
[2025-06-04 08:54:11] 2025-06-04 12:53:51,577 | INFO     | . stage-out = 0 s
[2025-06-04 08:54:11] 2025-06-04 12:53:51,577 | INFO     | . log creation = 0 s
[2025-06-04 08:54:11] 2025-06-04 12:53:51,577 | INFO     | ..............................
[2025-06-04 08:54:11] 2025-06-04 12:53:51,634 | INFO     | 
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | job summary report
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | --------------------------------------------------
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | PanDA job id: 6678365375
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | task id: 45006595
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | errors: (none)
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | pilot state: finished 
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | transexitcode: 0
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | exeerrorcode: 0
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | exeerrordiag: 
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | exitcode: 0
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | exitmsg: OK
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | cpuconsumptiontime: 22903 s
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | nevents: 400
[2025-06-04 08:54:11] 2025-06-04 12:53:51,635 | INFO     | neventsw: 0
[2025-06-04 08:54:11] 2025-06-04 12:53:51,636 | INFO     | pid: 3010790
[2025-06-04 08:54:11] 2025-06-04 12:53:51,636 | INFO     | pgrp: 3010790
[2025-06-04 08:54:11] 2025-06-04 12:53:51,636 | INFO     | corecount: 8
[2025-06-04 08:54:11] 2025-06-04 12:53:51,636 | INFO     | event service: False
[2025-06-04 08:54:11] 2025-06-04 12:53:51,636 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 3495: 2423172, 3496: 2423171, 3497: 2432352, 3500: 2432466}
[2025-06-04 08:54:11] 2025-06-04 12:53:51,636 | INFO     | --------------------------------------------------
[2025-06-04 08:54:11] 2025-06-04 12:53:51,636 | INFO     | 
[2025-06-04 08:54:11] 2025-06-04 12:53:51,636 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:54:11] 2025-06-04 12:53:51,650 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,650 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,650 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,650 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,651 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:54:11] 2025-06-04 12:53:51,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,651 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:54:11] 2025-06-04 12:53:51,651 | INFO     | job 6678365375 has completed (purged errors)
[2025-06-04 08:54:11] 2025-06-04 12:53:51,652 | INFO     | overall cleanup function is called
[2025-06-04 08:54:11] 2025-06-04 12:53:52,659 | INFO     | --- collectZombieJob: --- 10, [3010790]
[2025-06-04 08:54:11] 2025-06-04 12:53:52,659 | INFO     | zombie collector waiting for pid 3010790
[2025-06-04 08:54:11] 2025-06-04 12:53:52,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:54:11] 2025-06-04 12:53:52,659 | INFO     | collected zombie processes
[2025-06-04 08:54:11] 2025-06-04 12:53:52,659 | INFO     | will attempt to kill all subprocesses of pid=3010790
[2025-06-04 08:54:11] 2025-06-04 12:53:52,977 | INFO     | process IDs to be killed: [3010790] (in reverse order)
[2025-06-04 08:54:11] 2025-06-04 12:53:53,036 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:54:11] 2025-06-04 12:53:53,036 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:54:11] 2025-06-04 12:53:53,050 | INFO     | did not find any defunct processes belonging to 3010790
[2025-06-04 08:54:11] 2025-06-04 12:53:53,063 | INFO     | did not find any defunct processes belonging to 3010790
[2025-06-04 08:54:11] 2025-06-04 12:53:53,063 | INFO     | ready for new job
[2025-06-04 08:54:11] 2025-06-04 12:53:53,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:54:11] 2025-06-04 12:53:53,065 | INFO     | **************************************
[2025-06-04 08:54:11] 2025-06-04 12:53:53,065 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:54:11] 2025-06-04 12:53:53,065 | INFO     | **************************************
[2025-06-04 08:54:11] 2025-06-04 12:53:53,065 | INFO     | 
[2025-06-04 08:54:11] 2025-06-04 12:53:53,082 | INFO     | architecture information:
[2025-06-04 08:54:11] 2025-06-04 12:53:53,082 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:54:11] 2025-06-04 12:53:53,094 | INFO     | cat /etc/os-release:
[2025-06-04 08:54:11] NAME="CentOS Linux"
[2025-06-04 08:54:11] VERSION="7 (Core)"
[2025-06-04 08:54:11] ID="centos"
[2025-06-04 08:54:11] ID_LIKE="rhel fedora"
[2025-06-04 08:54:11] VERSION_ID="7"
[2025-06-04 08:54:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:54:11] ANSI_COLOR="0;31"
[2025-06-04 08:54:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:54:11] HOME_URL="https://www.centos.org/"
[2025-06-04 08:54:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:54:11] 
[2025-06-04 08:54:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:54:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:54:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:54:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:54:11] 
[2025-06-04 08:54:11] 2025-06-04 12:53:53,094 | INFO     | **************************************
[2025-06-04 08:54:11] 2025-06-04 12:53:53,597 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:54:11] 2025-06-04 12:53:53,610 | INFO     | sufficient remaining disk space (75409391616 B)
[2025-06-04 08:54:11] 2025-06-04 12:53:53,610 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:54:11] 2025-06-04 12:53:53,611 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:54:11] 2025-06-04 12:53:53,611 | INFO     | update_server=False
[2025-06-04 08:54:11] 2025-06-04 12:53:53,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:54:11] 2025-06-04 12:53:53,611 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:54:11] 2025-06-04 12:53:53,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:54:11] 2025-06-04 12:53:53,611 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:54:11] 2025-06-04 12:53:53,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:54:11] 2025-06-04 12:53:53,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:54:11] 2025-06-04 12:53:53,904 | INFO     | all payload control threads have been joined
[2025-06-04 08:54:11] 2025-06-04 12:53:54,036 | WARNING  | process 3010790 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:54:11] 2025-06-04 12:53:54,064 | INFO     | all job control threads have been joined
[2025-06-04 08:54:11] 2025-06-04 12:53:54,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:54:11] 2025-06-04 12:53:54,288 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:54:11] 2025-06-04 12:53:54,289 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:54:11] 2025-06-04 12:53:54,291 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6678365375/payload.stdout) since it has not been created yet
[2025-06-04 08:54:11] 2025-06-04 12:53:54,291 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:54:11] 2025-06-04 12:53:54,305 | INFO     | sufficient remaining disk space (75409391616 B)
[2025-06-04 08:54:11] 2025-06-04 12:53:54,308 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-06-04 08:54:11] 2025-06-04 12:53:54,308 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678365375/HITS.45006595._054406.pool.root.1 since it does not exist
[2025-06-04 08:54:11] 2025-06-04 12:53:54,337 | INFO     | all data control threads have been joined
[2025-06-04 08:54:11] 2025-06-04 12:53:54,576 | INFO     | number of running child processes to parent process 3010790: 1
[2025-06-04 08:54:11] 2025-06-04 12:53:54,576 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:54:11] 2025-06-04 12:53:54,576 | INFO     | aborting job monitoring since job object (job id=6678365375) has expired
[2025-06-04 08:54:11] 2025-06-04 12:53:54,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:54:11] 2025-06-04 12:53:54,576 | INFO     | will abort loop
[2025-06-04 08:54:11] 2025-06-04 12:53:54,616 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:54,617 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:54,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:54:11] 2025-06-04 12:53:54,830 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:54,906 | INFO     | [payload] control thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:55,069 | INFO     | [job] control thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:55,342 | INFO     | [data] control thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:55,392 | INFO     | [job] validate thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:55,581 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:55,584 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:55,652 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:55,715 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:55,748 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:55,983 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:56,223 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:53:58,819 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:54:04,578 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:54:11] 2025-06-04 12:54:05,583 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:54:11] 2025-06-04 12:54:06,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140446777345856)>', '<ExcThread(monitor, started 140446269421312)>']
[2025-06-04 08:54:11] 2025-06-04 12:54:06,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:54:11] 2025-06-04 12:54:06,678 | INFO     | [monitor] control thread has ended
[2025-06-04 08:54:11] 2025-06-04 12:54:11,246 | INFO     | all workflow threads have been joined
[2025-06-04 08:54:11] 2025-06-04 12:54:11,246 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:54:11] 2025-06-04 12:54:11,247 | INFO     | traces error code: 0
[2025-06-04 08:54:11] 2025-06-04 12:54:11,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:54:11] 2025-06-04 12:54:11,430 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:54:11] 2025-06-04 12:54:11,431 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:54:11] 2025-06-04 12:54:11,432 [wrapper] pilotpid: 3003133
[2025-06-04 08:54:11] 2025-06-04 12:54:11,434 [wrapper] Pilot exit status: 0
[2025-06-04 08:54:11] 2025-06-04 12:54:11,441 [wrapper] pandaids: 6678365375
[2025-06-04 08:54:11] 2025-06-04 12:54:11,479 [wrapper] cleanup supervisor_pilot 3157670 3003134
[2025-06-04 08:54:11] 2025-06-04 12:54:11,481 [wrapper] Test setup, not cleaning
[2025-06-04 08:54:11] 2025-06-04 12:54:11,482 [wrapper] apfmon messages muted
[2025-06-04 08:54:11] 2025-06-04 12:54:11,484 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:54:11] 2025-06-04 12:54:11,485 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:54:11]  *** Error codes and diagnostics ***
[2025-06-04 08:54:11]     "exeErrorCode": 0,
[2025-06-04 08:54:11]     "exeErrorDiag": "",
[2025-06-04 08:54:11]     "pilotErrorCode": 0,
[2025-06-04 08:54:11]     "pilotErrorDiag": "",
[2025-06-04 08:54:11]  *** Listing of results directory ***
[2025-06-04 08:54:11] total 388840
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:35 queuedata.json
[2025-06-04 08:54:11] -rwx------ 1 boincer umatlas     37140 Jun  4 02:36 runpilot2-wrapper.sh
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:54:11] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:55 run_atlas
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:55 job.xml
[2025-06-04 08:54:11] -rw-r--r-- 2 boincer umatlas 217340707 Jun  4 07:55 EVNT.45006593._002177.pool.root.1
[2025-06-04 08:54:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:55 start_atlas.sh
[2025-06-04 08:54:11] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:55 shared
[2025-06-04 08:54:11] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 07:55 input.tar.gz
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:55 boinc_lockfile
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 07:55 pandaJob.out
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas    986812 Jun  4 07:55 agis_schedconf.cvmfs.json
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas   1598969 Jun  4 07:55 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:54:11] drwx------ 4 boincer umatlas      4096 Jun  4 07:55 pilot3
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas 175668229 Jun  4 08:53 HITS.45006595._054406.pool.root.1
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas        95 Jun  4 08:53 pilot_heartbeat.json
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas       529 Jun  4 08:53 boinc_task_state.xml
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas      1032 Jun  4 08:53 memory_monitor_summary.json
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas    306425 Jun  4 08:53 log.45006595._054406.job.log.tgz.1
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas      7714 Jun  4 08:53 heartbeat.json
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:53 boinc_mmap_file
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:53 wrapper_checkpoint.txt
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas      6856 Jun  4 08:54 init_data.xml
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas      5827 Jun  4 08:54 pilotlog.txt
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas    357026 Jun  4 08:54 log.45006595._054406.job.log.1
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas       357 Jun  4 08:54 output.list
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:54 runtime_log
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas    686080 Jun  4 08:54 result.tar.gz
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas       650 Jun  4 08:54 yLZLDmouwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2XnKDm4LZ0No.diag
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 08:54 runtime_log.err
[2025-06-04 08:54:11] -rw-r--r-- 1 boincer umatlas     21872 Jun  4 08:54 stderr.txt
[2025-06-04 08:54:11] HITS file was successfully produced:
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas 175668229 Jun  4 08:53 shared/HITS.pool.root.1
[2025-06-04 08:54:11]  *** Contents of shared directory: ***
[2025-06-04 08:54:11] total 384996
[2025-06-04 08:54:11] -rw-r--r-- 2 boincer umatlas 217340707 Jun  4 07:55 ATLAS.root_0
[2025-06-04 08:54:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:55 start_atlas.sh
[2025-06-04 08:54:11] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 07:55 input.tar.gz
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas 175668229 Jun  4 08:53 HITS.pool.root.1
[2025-06-04 08:54:11] -rw------- 1 boincer umatlas    686080 Jun  4 08:54 result.tar.gz
08:54:12 (2997127): run_atlas exited; CPU time 23035.296255
08:54:12 (2997127): called boinc_finish(0)

</stderr_txt>
]]>

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