Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:48:37 (826002): wrapper (7.7.26015): starting
06:48:37 (826002): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 06:48:37] Arguments: --nthreads 12
[2025-06-06 06:48:37] Threads: 12
[2025-06-06 06:48:37] Checking for CVMFS
[2025-06-06 06:48:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 06:48:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 06:48:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 06:48:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 06:48:39] 2.12.7.0 4529 2009 43152 146846 3 58 2567204 4096001 90 130560 0 2298976 99.993 478321 147 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 06:48:39] CVMFS is ok
[2025-06-06 06:48:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 06:48:39] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 06:48:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 06:48:39] Further information can be found at the LHC@home message board.
[2025-06-06 06:48:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 06:48:39] Checking for apptainer binary...
[2025-06-06 06:48:39] apptainer is not installed, using version from CVMFS
[2025-06-06 06:48:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 06:48:44] martinpcalt
[2025-06-06 06:48:44] apptainer works
[2025-06-06 06:48:44] Set ATHENA_PROC_NUMBER=12
[2025-06-06 06:48:44] Set ATHENA_CORE_NUMBER=12
[2025-06-06 06:48:44] Starting ATLAS job with PandaID=6678365274
[2025-06-06 06:48:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 09:17:09]  *** The last 200 lines of the pilot log: ***
[2025-06-06 09:17:09] 2025-06-06 09:16:51,291 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 09:17:09] 2025-06-06 09:16:51,291 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 09:17:09] 2025-06-06 09:16:51,291 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 09:17:09] 2025-06-06 09:16:51,291 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 09:17:09] 2025-06-06 09:16:51,292 | INFO     | fitting pss+swap vs Time
[2025-06-06 09:17:09] 2025-06-06 09:16:51,292 | INFO     | sum of square deviations: 945282840.0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,293 | INFO     | sum of deviations: -5958086488.999996
[2025-06-06 09:17:09] 2025-06-06 09:16:51,293 | INFO     | mean x: 1749196945.0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,293 | INFO     | mean y: 2636881.1172413793
[2025-06-06 09:17:09] 2025-06-06 09:16:51,293 | INFO     | -- intersect: 11027767396.1328
[2025-06-06 09:17:09] 2025-06-06 09:16:51,293 | INFO     | intersect: 11027767396.1328
[2025-06-06 09:17:09] 2025-06-06 09:16:51,293 | INFO     | chi2: 3.099937465213268
[2025-06-06 09:17:09] 2025-06-06 09:16:51,293 | INFO     | sum of square deviations: 850825255.0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,293 | INFO     | sum of deviations: 13353441161.500008
[2025-06-06 09:17:09] 2025-06-06 09:16:51,293 | INFO     | mean x: 1749196792.5
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | mean y: 2667373.6214285716
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | -- intersect: -27450439255.815998
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | intersect: -27450439255.815998
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | chi2: 1.5509181726943213
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | current chi2=1.5509181726943213 (change=49.96937228255919 %)
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | sum of square deviations: 762879420.0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | sum of deviations: 12935439607.0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | mean x: 1749196640.0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | mean y: 2666648.511111111
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | -- intersect: -29656840351.280968
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | intersect: -29656840351.280968
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | chi2: 1.5531145588376254
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | current chi2=1.5531145588376254 (change=-0.1416184413835599 %)
[2025-06-06 09:17:09] 2025-06-06 09:16:51,294 | INFO     | right removable region: 134
[2025-06-06 09:17:09] 2025-06-06 09:16:51,295 | INFO     | sum of square deviations: 850825255.0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,295 | INFO     | sum of deviations: -28171378314.000004
[2025-06-06 09:17:09] 2025-06-06 09:16:51,295 | INFO     | mean x: 1749197097.5
[2025-06-06 09:17:09] 2025-06-06 09:16:51,295 | INFO     | mean y: 2672085.0142857144
[2025-06-06 09:17:09] 2025-06-06 09:16:51,295 | INFO     | -- intersect: 57919727191.02809
[2025-06-06 09:17:09] 2025-06-06 09:16:51,295 | INFO     | intersect: 57919727191.02809
[2025-06-06 09:17:09] 2025-06-06 09:16:51,295 | INFO     | chi2: 1.6458402068213882
[2025-06-06 09:17:09] 2025-06-06 09:16:51,295 | INFO     | current chi2=1.6458402068213882 (change=46.907309412186535 %)
[2025-06-06 09:17:09] 2025-06-06 09:16:51,295 | INFO     | sum of square deviations: 762879420.0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,295 | INFO     | sum of deviations: -25471578277.000004
[2025-06-06 09:17:09] 2025-06-06 09:16:51,295 | INFO     | mean x: 1749197250.0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,295 | INFO     | mean y: 2667389.8518518517
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | -- intersect: 58406149653.52093
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | intersect: 58406149653.52093
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | chi2: 1.6464276850185509
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | current chi2=1.6464276850185509 (change=-0.0356947287305155 %)
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | left removable region: 20
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | sum of square deviations: 459366752.5
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | sum of deviations: -1372324564.0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | mean x: 1749197219.5
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | mean y: 2690209.736842105
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | -- intersect: 5228288924.7860985
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | intersect: 5228288924.7860985
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | chi2: 0.013391280279532463
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | -- intersect: 5228288924.7860985
[2025-06-06 09:17:09] 2025-06-06 09:16:51,296 | INFO     | current memory leak: -2.99 B/s (using 114 data points, chi2=0.01)
[2025-06-06 09:17:09] 2025-06-06 09:16:51,297 | INFO     | ..............................
[2025-06-06 09:17:09] 2025-06-06 09:16:51,297 | INFO     | . Timing measurements:
[2025-06-06 09:17:09] 2025-06-06 09:16:51,297 | INFO     | . get job = 0 s
[2025-06-06 09:17:09] 2025-06-06 09:16:51,297 | INFO     | . initial setup = 1 s
[2025-06-06 09:17:09] 2025-06-06 09:16:51,297 | INFO     | . payload setup = 6 s
[2025-06-06 09:17:09] 2025-06-06 09:16:51,297 | INFO     | . stage-in = 0 s
[2025-06-06 09:17:09] 2025-06-06 09:16:51,297 | INFO     | . payload execution = 8842 s
[2025-06-06 09:17:09] 2025-06-06 09:16:51,297 | INFO     | . stage-out = 7 s
[2025-06-06 09:17:09] 2025-06-06 09:16:51,297 | INFO     | . log creation = 0 s
[2025-06-06 09:17:09] 2025-06-06 09:16:51,297 | INFO     | ..............................
[2025-06-06 09:17:09] 2025-06-06 09:16:51,332 | INFO     | 
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | job summary report
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | --------------------------------------------------
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | PanDA job id: 6678365274
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | task id: 45006595
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | errors: (none)
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | pilot state: finished 
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | transexitcode: 0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | exeerrorcode: 0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | exeerrordiag: 
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | exitcode: 0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | exitmsg: OK
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | cpuconsumptiontime: 27687 s
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | nevents: 400
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | neventsw: 0
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | pid: 838192
[2025-06-06 09:17:09] 2025-06-06 09:16:51,349 | INFO     | pgrp: 838192
[2025-06-06 09:17:09] 2025-06-06 09:16:51,350 | INFO     | corecount: 12
[2025-06-06 09:17:09] 2025-06-06 09:16:51,350 | INFO     | event service: False
[2025-06-06 09:17:09] 2025-06-06 09:16:51,350 | INFO     | sizes: {0: 2397365, 2: 2397571, 11: 2397599, 8857: 2425403, 8864: 2434446, 8866: 2434560}
[2025-06-06 09:17:09] 2025-06-06 09:16:51,350 | INFO     | --------------------------------------------------
[2025-06-06 09:17:09] 2025-06-06 09:16:51,350 | INFO     | 
[2025-06-06 09:17:09] 2025-06-06 09:16:51,350 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 09:17:09] 2025-06-06 09:16:51,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 09:17:09] 2025-06-06 09:16:51,357 | INFO     | job 6678365274 has completed (purged errors)
[2025-06-06 09:17:09] 2025-06-06 09:16:51,357 | INFO     | overall cleanup function is called
[2025-06-06 09:17:09] 2025-06-06 09:16:52,363 | INFO     | --- collectZombieJob: --- 10, [838192]
[2025-06-06 09:17:09] 2025-06-06 09:16:52,363 | INFO     | zombie collector waiting for pid 838192
[2025-06-06 09:17:09] 2025-06-06 09:16:52,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 09:17:09] 2025-06-06 09:16:52,363 | INFO     | collected zombie processes
[2025-06-06 09:17:09] 2025-06-06 09:16:52,363 | INFO     | will attempt to kill all subprocesses of pid=838192
[2025-06-06 09:17:09] 2025-06-06 09:16:52,395 | INFO     | process IDs to be killed: [838192] (in reverse order)
[2025-06-06 09:17:09] 2025-06-06 09:16:52,410 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 09:17:09] 2025-06-06 09:16:52,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 09:17:09] 2025-06-06 09:16:52,412 | INFO     | did not find any defunct processes belonging to 838192
[2025-06-06 09:17:09] 2025-06-06 09:16:52,413 | INFO     | did not find any defunct processes belonging to 838192
[2025-06-06 09:17:09] 2025-06-06 09:16:52,413 | INFO     | ready for new job
[2025-06-06 09:17:09] 2025-06-06 09:16:52,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 09:17:09] 2025-06-06 09:16:52,414 | INFO     | **************************************
[2025-06-06 09:17:09] 2025-06-06 09:16:52,414 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 09:17:09] 2025-06-06 09:16:52,414 | INFO     | **************************************
[2025-06-06 09:17:09] 2025-06-06 09:16:52,414 | INFO     | 
[2025-06-06 09:17:09] 2025-06-06 09:16:52,432 | INFO     | architecture information:
[2025-06-06 09:17:09] 2025-06-06 09:16:52,432 | INFO     | executing command: cat /etc/os-release
[2025-06-06 09:17:09] 2025-06-06 09:16:52,439 | INFO     | cat /etc/os-release:
[2025-06-06 09:17:09] NAME="CentOS Linux"
[2025-06-06 09:17:09] VERSION="7 (Core)"
[2025-06-06 09:17:09] ID="centos"
[2025-06-06 09:17:09] ID_LIKE="rhel fedora"
[2025-06-06 09:17:09] VERSION_ID="7"
[2025-06-06 09:17:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 09:17:09] ANSI_COLOR="0;31"
[2025-06-06 09:17:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 09:17:09] HOME_URL="https://www.centos.org/"
[2025-06-06 09:17:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 09:17:09] 
[2025-06-06 09:17:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 09:17:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 09:17:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 09:17:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 09:17:09] 
[2025-06-06 09:17:09] 2025-06-06 09:16:52,439 | INFO     | **************************************
[2025-06-06 09:17:09] 2025-06-06 09:16:52,940 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-06 09:17:09] 2025-06-06 09:16:52,945 | INFO     | sufficient remaining disk space (278164144128 B)
[2025-06-06 09:17:09] 2025-06-06 09:16:52,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 09:17:09] 2025-06-06 09:16:52,945 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 09:17:09] 2025-06-06 09:16:52,946 | INFO     | update_server=False
[2025-06-06 09:17:09] 2025-06-06 09:16:52,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 09:17:09] 2025-06-06 09:16:52,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 09:17:09] 2025-06-06 09:16:52,946 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 09:17:09] 2025-06-06 09:16:52,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:17:09] 2025-06-06 09:16:52,946 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 09:17:09] 2025-06-06 09:16:52,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 09:17:09] 2025-06-06 09:16:52,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 09:17:09] 2025-06-06 09:16:53,056 | INFO     | all data control threads have been joined
[2025-06-06 09:17:09] 2025-06-06 09:16:53,140 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 09:17:09] 2025-06-06 09:16:53,140 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 09:17:09] 2025-06-06 09:16:53,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:17:09] 2025-06-06 09:16:53,140 | INFO     | will abort loop
[2025-06-06 09:17:09] 2025-06-06 09:16:53,659 | INFO     | all payload control threads have been joined
[2025-06-06 09:17:09] 2025-06-06 09:16:53,860 | INFO     | all job control threads have been joined
[2025-06-06 09:17:09] 2025-06-06 09:16:53,948 | INFO     | [job] queue monitor thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:53,977 | INFO     | [job] retrieve thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:54,061 | INFO     | [data] control thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:54,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:54,144 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:54,170 | INFO     | [data] copytool_in thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:54,170 | INFO     | [job] job monitor thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:54,170 | INFO     | [job] validate thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:54,170 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:54,648 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:54,664 | INFO     | [payload] control thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:54,863 | INFO     | [job] control thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:54,948 | INFO     | [data] copytool_out thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:55,080 | INFO     | [payload] failed_post thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:55,083 | INFO     | [payload] validate_post thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:16:55,540 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 09:17:09] 2025-06-06 09:16:59,545 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 09:17:09] 2025-06-06 09:17:01,619 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651244250944)>', '<ExcThread(monitor, started 139650945488640)>']
[2025-06-06 09:17:09] 2025-06-06 09:17:02,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 09:17:09] 2025-06-06 09:17:02,014 | INFO     | [monitor] control thread has ended
[2025-06-06 09:17:09] 2025-06-06 09:17:06,644 | INFO     | all workflow threads have been joined
[2025-06-06 09:17:09] 2025-06-06 09:17:06,644 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 09:17:09] 2025-06-06 09:17:06,672 | INFO     | traces error code: 0
[2025-06-06 09:17:09] 2025-06-06 09:17:06,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 09:17:09] 2025-06-06 09:17:08,304 [wrapper] ==== pilot stdout END ====
[2025-06-06 09:17:09] 2025-06-06 09:17:08,306 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 09:17:09] 2025-06-06 09:17:08,306 [wrapper] pilotpid: 829627
[2025-06-06 09:17:09] 2025-06-06 09:17:08,307 [wrapper] Pilot exit status: 0
[2025-06-06 09:17:09] 2025-06-06 09:17:08,348 [wrapper] pandaids: 6678365274
[2025-06-06 09:17:09] 2025-06-06 09:17:08,356 [wrapper] cleanup supervisor_pilot  879323 829628
[2025-06-06 09:17:09] 2025-06-06 09:17:08,357 [wrapper] Test setup, not cleaning
[2025-06-06 09:17:09] 2025-06-06 09:17:08,362 [wrapper] apfmon messages muted
[2025-06-06 09:17:09] 2025-06-06 09:17:08,363 [wrapper] ==== wrapper stdout END ====
[2025-06-06 09:17:09] 2025-06-06 09:17:08,365 [wrapper] ==== wrapper stderr END ====
[2025-06-06 09:17:09]  *** Error codes and diagnostics ***
[2025-06-06 09:17:09]     "exeErrorCode": 0,
[2025-06-06 09:17:09]     "exeErrorDiag": "",
[2025-06-06 09:17:09]     "pilotErrorCode": 0,
[2025-06-06 09:17:09]     "pilotErrorDiag": "",
[2025-06-06 09:17:09]  *** Listing of results directory ***
[2025-06-06 09:17:09] total 389112
[2025-06-06 09:17:09] -rw-r--r-- 1 boinc boinc    495897 Jun  4 05:59 pilot3.tar.gz
[2025-06-06 09:17:09] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:31 queuedata.json
[2025-06-06 09:17:09] -rwx------ 1 boinc boinc     37140 Jun  4 06:32 runpilot2-wrapper.sh
[2025-06-06 09:17:09] -rw-rw-r-- 1 boinc boinc       100 Jun  6 06:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 09:17:09] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 06:48 run_atlas
[2025-06-06 09:17:09] -rw-rw-r-- 1 boinc boinc       105 Jun  6 06:48 job.xml
[2025-06-06 09:17:09] -rw-rw-r-- 1 boinc boinc      9334 Jun  6 06:48 init_data.xml
[2025-06-06 09:17:09] -rw-r--r-- 2 boinc boinc 214055240 Jun  6 06:48 EVNT.45006593._002173.pool.root.1
[2025-06-06 09:17:09] drwxrwx--x 2 boinc boinc      4096 Jun  6 06:48 shared
[2025-06-06 09:17:09] -rw-r--r-- 2 boinc boinc    508875 Jun  6 06:48 input.tar.gz
[2025-06-06 09:17:09] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:48 start_atlas.sh
[2025-06-06 09:17:09] -rw-rw-r-- 1 boinc boinc         0 Jun  6 06:48 boinc_lockfile
[2025-06-06 09:17:09] -rw-rw-r-- 1 boinc boinc      2525 Jun  6 06:48 pandaJob.out
[2025-06-06 09:17:09] -rw------- 1 boinc boinc    988117 Jun  6 06:48 agis_schedconf.cvmfs.json
[2025-06-06 09:17:09] -rw------- 1 boinc boinc   1598969 Jun  6 06:48 agis_ddmendpoints.agis.ALL.json
[2025-06-06 09:17:09] drwx------ 4 boinc boinc      4096 Jun  6 06:48 pilot3
[2025-06-06 09:17:09] -rw------- 1 boinc boinc 178016284 Jun  6 09:11 HITS.45006595._054305.pool.root.1
[2025-06-06 09:17:09] -rw-rw-r-- 1 boinc boinc       529 Jun  6 09:14 boinc_task_state.xml
[2025-06-06 09:17:09] -rw------- 1 boinc boinc        95 Jun  6 09:16 pilot_heartbeat.json
[2025-06-06 09:17:09] -rw------- 1 boinc boinc      1040 Jun  6 09:16 memory_monitor_summary.json
[2025-06-06 09:17:09] -rw------- 1 boinc boinc    410831 Jun  6 09:16 log.45006595._054305.job.log.tgz.1
[2025-06-06 09:17:09] -rw------- 1 boinc boinc      7719 Jun  6 09:16 heartbeat.json
[2025-06-06 09:17:09] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 09:16 boinc_mmap_file
[2025-06-06 09:17:09] -rw-rw-r-- 1 boinc boinc        27 Jun  6 09:16 wrapper_checkpoint.txt
[2025-06-06 09:17:09] -rw------- 1 boinc boinc      4686 Jun  6 09:17 pilotlog.txt
[2025-06-06 09:17:09] -rw------- 1 boinc boinc    855501 Jun  6 09:17 log.45006595._054305.job.log.1
[2025-06-06 09:17:09] -rw------- 1 boinc boinc       357 Jun  6 09:17 output.list
[2025-06-06 09:17:09] -rw-rw-r-- 1 boinc boinc       620 Jun  6 09:17 runtime_log
[2025-06-06 09:17:09] -rw------- 1 boinc boinc   1290240 Jun  6 09:17 result.tar.gz
[2025-06-06 09:17:09] -rw-rw-r-- 1 boinc boinc      8978 Jun  6 09:17 runtime_log.err
[2025-06-06 09:17:09] -rw------- 1 boinc boinc       659 Jun  6 09:17 BsZKDmuqwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYWnKDmzK98hn.diag
[2025-06-06 09:17:09] -rw-rw-r-- 1 boinc boinc     20937 Jun  6 09:17 stderr.txt
[2025-06-06 09:17:09] HITS file was successfully produced:
[2025-06-06 09:17:09] -rw------- 1 boinc boinc 178016284 Jun  6 09:11 shared/HITS.pool.root.1
[2025-06-06 09:17:09]  *** Contents of shared directory: ***
[2025-06-06 09:17:09] total 384672
[2025-06-06 09:17:09] -rw-r--r-- 2 boinc boinc 214055240 Jun  6 06:48 ATLAS.root_0
[2025-06-06 09:17:09] -rw-r--r-- 2 boinc boinc    508875 Jun  6 06:48 input.tar.gz
[2025-06-06 09:17:09] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:48 start_atlas.sh
[2025-06-06 09:17:09] -rw------- 1 boinc boinc 178016284 Jun  6 09:11 HITS.pool.root.1
[2025-06-06 09:17:09] -rw------- 1 boinc boinc   1290240 Jun  6 09:17 result.tar.gz
09:17:11 (826002): run_atlas exited; CPU time 27721.386193
09:17:11 (826002): called boinc_finish(0)

</stderr_txt>
]]>

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