Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:04:15 (19546): wrapper (7.7.26015): starting
10:04:15 (19546): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 10:04:15] Arguments: --nthreads 12
[2025-06-04 10:04:15] Threads: 12
[2025-06-04 10:04:15] Checking for CVMFS
[2025-06-04 10:04:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:04:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:04:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:04:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:04:15] 2.10.0.0 29567 2665 114980 146783 2 187 15047566 16777217 878 130560 0 10882105 99.998 629053 6801 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-04 10:04:15] CVMFS is ok
[2025-06-04 10:04:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:04:15] Checking for apptainer binary...
[2025-06-04 10:04:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:04:15] Running /usr/bin/apptainer --version
[2025-06-04 10:04:15] apptainer version 1.3.6-150600.4.9.1
[2025-06-04 10:04:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:04:15] boinc-runner
[2025-06-04 10:04:15] apptainer works
[2025-06-04 10:04:15] Set ATHENA_PROC_NUMBER=12
[2025-06-04 10:04:15] Set ATHENA_CORE_NUMBER=12
[2025-06-04 10:04:15] Starting ATLAS job with PandaID=6678365257
[2025-06-04 10:04:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:33:38]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:33:38]  direct_access_wan=False
[2025-06-04 10:33:38]  domain=
[2025-06-04 10:33:38]  filesize=323808
[2025-06-04 10:33:38]  filetype=log
[2025-06-04 10:33:38]  guid=0fcebb5c-bb5b-4429-8d2e-de557d2a0923
[2025-06-04 10:33:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:33:38]  is_altstaged=None
[2025-06-04 10:33:38]  is_tar=False
[2025-06-04 10:33:38]  lfn=log.45006595._054288.job.log.tgz.1
[2025-06-04 10:33:38]  mtime=0
[2025-06-04 10:33:38]  protocol_id=None
[2025-06-04 10:33:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:33:38]  replicas=None
[2025-06-04 10:33:38]  scope=mc23_13p6TeV
[2025-06-04 10:33:38]  status=None
[2025-06-04 10:33:38]  status_code=0
[2025-06-04 10:33:38]  storage_token=
[2025-06-04 10:33:38]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678365257/log.45006595._054288.job.log.tgz.1
[2025-06-04 10:33:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/d5/log.45006595._054288.job.log.tgz.1
[2025-06-04 10:33:38]  workdir=None
[2025-06-04 10:33:38] ]
[2025-06-04 10:33:38] 2025-06-04 15:33:15,903 | INFO     | transferring file log.45006595._054288.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678365257/log.45006595._054288.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 10:33:38] 2025-06-04 15:33:15,903 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678365257/log.45006595._054288.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._054288.job
[2025-06-04 10:33:38] 2025-06-04 15:33:15,912 | INFO     | adding to output.list: log.45006595._054288.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/d5/log.45006595._054288.job.log.tg
[2025-06-04 10:33:38] 2025-06-04 15:33:15,913 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:33:38] 2025-06-04 15:33:15,913 | INFO     | summary of transferred files:
[2025-06-04 10:33:38] 2025-06-04 15:33:15,913 | INFO     |  -- lfn=log.45006595._054288.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:33:38] 2025-06-04 15:33:15,913 | INFO     | stage-out finished correctly
[2025-06-04 10:33:38] 2025-06-04 15:33:16,099 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:33:38] 2025-06-04 15:33:16,777 | INFO     | job 6678365257 has state=finished
[2025-06-04 10:33:38] 2025-06-04 15:33:16,777 | INFO     | preparing for final server update for job 6678365257 in state='finished'
[2025-06-04 10:33:38] 2025-06-04 15:33:16,777 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:33:38] 2025-06-04 15:33:16,777 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:33:38] 2025-06-04 15:33:16,777 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:33:38] 2025-06-04 15:33:16,777 | INFO     | job 6678365257 has finished - writing final server update
[2025-06-04 10:33:38] 2025-06-04 15:33:16,777 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:33:38] 2025-06-04 15:33:16,780 | INFO     | executing command: lscpu
[2025-06-04 10:33:38] 2025-06-04 15:33:16,797 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:33:38] 2025-06-04 15:33:17,785 | INFO     | monitor loop #136: job 0:6678365257 is in state 'finished'
[2025-06-04 10:33:38] 2025-06-04 15:33:17,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:33:38] 2025-06-04 15:33:18,863 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:33:38] 2025-06-04 15:33:18,863 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678365257/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:33:38] 2025-06-04 15:33:18,863 | INFO     | extracted standard info from prmon json
[2025-06-04 10:33:38] 2025-06-04 15:33:18,864 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:33:38] 2025-06-04 15:33:18,864 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:33:38] 2025-06-04 15:33:18,864 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:33:38] 2025-06-04 15:33:18,864 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:33:38] 2025-06-04 15:33:18,864 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:33:38] 2025-06-04 15:33:18,864 | INFO     | sum of square deviations: 3294945.5
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | sum of deviations: -628252023.5
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | mean x: 1749050425.5
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | mean y: 2784938.6818181816
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | -- intersect: 333496758973.7337
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | intersect: 333496758973.7337
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | chi2: 0.009203275647740847
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | -- intersect: 333496758973.7337
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | current memory leak: -190.67 B/s (using 22 data points, chi2=0.01)
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | ..............................
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | . Timing measurements:
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | . get job = 0 s
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | . initial setup = 2 s
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | . payload setup = 3 s
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | . stage-in = 0 s
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | . payload execution = 1714 s
[2025-06-04 10:33:38] 2025-06-04 15:33:18,865 | INFO     | . stage-out = 0 s
[2025-06-04 10:33:38] 2025-06-04 15:33:18,866 | INFO     | . log creation = 0 s
[2025-06-04 10:33:38] 2025-06-04 15:33:18,866 | INFO     | ..............................
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | 
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | job summary report
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | --------------------------------------------------
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | PanDA job id: 6678365257
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | task id: 45006595
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | errors: (none)
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | pilot state: finished 
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | transexitcode: 0
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | exeerrorcode: 0
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | exeerrordiag: 
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | exitcode: 0
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | exitmsg: OK
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | cpuconsumptiontime: 18446 s
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | nevents: 400
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | neventsw: 0
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | pid: 30447
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | pgrp: 30447
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | corecount: 12
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | event service: False
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | sizes: {0: 2397342, 2: 2397548, 11: 2397576, 1720: 2422391, 1721: 2431388, 1724: 2431502}
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | --------------------------------------------------
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | 
[2025-06-04 10:33:38] 2025-06-04 15:33:18,893 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 10:33:38] 2025-06-04 15:33:18,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:33:38] 2025-06-04 15:33:18,905 | INFO     | job 6678365257 has completed (purged errors)
[2025-06-04 10:33:38] 2025-06-04 15:33:18,906 | INFO     | overall cleanup function is called
[2025-06-04 10:33:38] 2025-06-04 15:33:19,915 | INFO     | --- collectZombieJob: --- 10, [30447]
[2025-06-04 10:33:38] 2025-06-04 15:33:19,915 | INFO     | zombie collector waiting for pid 30447
[2025-06-04 10:33:38] 2025-06-04 15:33:19,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:33:38] 2025-06-04 15:33:19,915 | INFO     | collected zombie processes
[2025-06-04 10:33:38] 2025-06-04 15:33:19,915 | INFO     | will attempt to kill all subprocesses of pid=30447
[2025-06-04 10:33:38] 2025-06-04 15:33:19,957 | INFO     | process IDs to be killed: [30447] (in reverse order)
[2025-06-04 10:33:38] 2025-06-04 15:33:19,982 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:33:38] 2025-06-04 15:33:19,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:33:38] 2025-06-04 15:33:19,984 | INFO     | did not find any defunct processes belonging to 30447
[2025-06-04 10:33:38] 2025-06-04 15:33:19,986 | INFO     | did not find any defunct processes belonging to 30447
[2025-06-04 10:33:38] 2025-06-04 15:33:19,986 | INFO     | ready for new job
[2025-06-04 10:33:38] 2025-06-04 15:33:19,986 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:33:38] 2025-06-04 15:33:19,987 | INFO     | **************************************
[2025-06-04 10:33:38] 2025-06-04 15:33:19,987 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:33:38] 2025-06-04 15:33:19,987 | INFO     | **************************************
[2025-06-04 10:33:38] 2025-06-04 15:33:19,987 | INFO     | 
[2025-06-04 10:33:38] 2025-06-04 15:33:19,988 | INFO     | architecture information:
[2025-06-04 10:33:38] 2025-06-04 15:33:19,988 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:33:38] 2025-06-04 15:33:19,999 | INFO     | cat /etc/os-release:
[2025-06-04 10:33:38] NAME="CentOS Linux"
[2025-06-04 10:33:38] VERSION="7 (Core)"
[2025-06-04 10:33:38] ID="centos"
[2025-06-04 10:33:38] ID_LIKE="rhel fedora"
[2025-06-04 10:33:38] VERSION_ID="7"
[2025-06-04 10:33:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:33:38] ANSI_COLOR="0;31"
[2025-06-04 10:33:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:33:38] HOME_URL="https://www.centos.org/"
[2025-06-04 10:33:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:33:38] 
[2025-06-04 10:33:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:33:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:33:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:33:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:33:38] 
[2025-06-04 10:33:38] 2025-06-04 15:33:19,999 | INFO     | **************************************
[2025-06-04 10:33:38] 2025-06-04 15:33:20,502 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 10:33:38] 2025-06-04 15:33:20,514 | INFO     | sufficient remaining disk space (3889067720704 B)
[2025-06-04 10:33:38] 2025-06-04 15:33:20,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:33:38] 2025-06-04 15:33:20,514 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:33:38] 2025-06-04 15:33:20,514 | INFO     | update_server=False
[2025-06-04 10:33:38] 2025-06-04 15:33:20,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:33:38] 2025-06-04 15:33:20,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:33:38] 2025-06-04 15:33:20,550 | INFO     | all data control threads have been joined
[2025-06-04 10:33:38] 2025-06-04 15:33:21,230 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:33:38] 2025-06-04 15:33:21,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:33:38] 2025-06-04 15:33:21,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:33:38] 2025-06-04 15:33:21,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:33:38] 2025-06-04 15:33:21,290 | INFO     | aborting loop
[2025-06-04 10:33:38] 2025-06-04 15:33:21,323 | INFO     | all job control threads have been joined
[2025-06-04 10:33:38] 2025-06-04 15:33:21,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:33:38] 2025-06-04 15:33:21,520 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:21,520 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:21,555 | INFO     | [data] control thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:21,578 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:21,903 | INFO     | all payload control threads have been joined
[2025-06-04 10:33:38] 2025-06-04 15:33:21,972 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:22,130 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:33:38] 2025-06-04 15:33:22,199 | INFO     | [job] validate thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:22,296 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:22,328 | INFO     | [job] control thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:22,452 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:22,574 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:22,626 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:22,909 | INFO     | [payload] control thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:23,057 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:23,451 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:26,135 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:30,850 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:33:38] 2025-06-04 15:33:31,855 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:33:38] 2025-06-04 15:33:33,206 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140621966923584)>', '<ExcThread(monitor, started 140621096404736)>']
[2025-06-04 10:33:38] 2025-06-04 15:33:33,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:33:38] 2025-06-04 15:33:33,286 | INFO     | [monitor] control thread has ended
[2025-06-04 10:33:38] 2025-06-04 15:33:38,231 | INFO     | all workflow threads have been joined
[2025-06-04 10:33:38] 2025-06-04 15:33:38,231 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:33:38] 2025-06-04 15:33:38,232 | INFO     | traces error code: 0
[2025-06-04 10:33:38] 2025-06-04 15:33:38,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:33:38] 2025-06-04 15:33:38,273 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:33:38] 2025-06-04 15:33:38,275 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:33:38] 2025-06-04 15:33:38,277 [wrapper] pilotpid: 23375
[2025-06-04 10:33:38] 2025-06-04 15:33:38,278 [wrapper] Pilot exit status: 0
[2025-06-04 10:33:38] 2025-06-04 15:33:38,285 [wrapper] pandaids: 6678365257
[2025-06-04 10:33:38] 2025-06-04 15:33:38,299 [wrapper] cleanup supervisor_pilot 13987 23376
[2025-06-04 10:33:38] 2025-06-04 15:33:38,301 [wrapper] Test setup, not cleaning
[2025-06-04 10:33:38] 2025-06-04 15:33:38,303 [wrapper] apfmon messages muted
[2025-06-04 10:33:38] 2025-06-04 15:33:38,304 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:33:38] 2025-06-04 15:33:38,306 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:33:38]  *** Error codes and diagnostics ***
[2025-06-04 10:33:38]     "exeErrorCode": 0,
[2025-06-04 10:33:38]     "exeErrorDiag": "",
[2025-06-04 10:33:38]     "pilotErrorCode": 0,
[2025-06-04 10:33:38]     "pilotErrorDiag": "",
[2025-06-04 10:33:38]  *** Listing of results directory ***
[2025-06-04 10:33:38] total 392040
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc    495897 Jun  4 00:59 pilot3.tar.gz
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:31 queuedata.json
[2025-06-04 10:33:38] -rwx------ 1 boinc boinc     37140 Jun  4 01:31 runpilot2-wrapper.sh
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc       100 Jun  4 10:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:33:38] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 10:04 run_atlas
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc       105 Jun  4 10:04 job.xml
[2025-06-04 10:33:38] -rw-r--r-- 2 boinc boinc     15093 Jun  4 10:04 start_atlas.sh
[2025-06-04 10:33:38] drwxrwx--x 1 boinc boinc        76 Jun  4 10:04 shared
[2025-06-04 10:33:38] -rw-r--r-- 2 boinc boinc    508877 Jun  4 10:04 input.tar.gz
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc     10044 Jun  4 10:04 init_data.xml
[2025-06-04 10:33:38] -rw-r--r-- 2 boinc boinc 214055240 Jun  4 10:04 EVNT.45006593._002173.pool.root.1
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc         0 Jun  4 10:04 boinc_lockfile
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc      2525 Jun  4 10:04 pandaJob.out
[2025-06-04 10:33:38] -rw------- 1 boinc boinc    987207 Jun  4 10:04 agis_schedconf.cvmfs.json
[2025-06-04 10:33:38] -rw------- 1 boinc boinc   1598969 Jun  4 10:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:33:38] drwx------ 1 boinc boinc       368 Jun  4 10:04 pilot3
[2025-06-04 10:33:38] -rw------- 1 boinc boinc        95 Jun  4 10:32 pilot_heartbeat.json
[2025-06-04 10:33:38] -rw------- 1 boinc boinc 182508225 Jun  4 10:32 HITS.45006595._054288.pool.root.1
[2025-06-04 10:33:38] -rw------- 1 boinc boinc      1025 Jun  4 10:33 memory_monitor_summary.json
[2025-06-04 10:33:38] -rw------- 1 boinc boinc    323808 Jun  4 10:33 log.45006595._054288.job.log.tgz.1
[2025-06-04 10:33:38] -rw------- 1 boinc boinc      7692 Jun  4 10:33 heartbeat.json
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc       529 Jun  4 10:33 boinc_task_state.xml
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc      8192 Jun  4 10:33 boinc_mmap_file
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc        27 Jun  4 10:33 wrapper_checkpoint.txt
[2025-06-04 10:33:38] -rw------- 1 boinc boinc      4427 Jun  4 10:33 pilotlog.txt
[2025-06-04 10:33:38] -rw------- 1 boinc boinc    205473 Jun  4 10:33 log.45006595._054288.job.log.1
[2025-06-04 10:33:38] -rw------- 1 boinc boinc       357 Jun  4 10:33 output.list
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc      8683 Jun  4 10:33 runtime_log.err
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc       620 Jun  4 10:33 runtime_log
[2025-06-04 10:33:38] -rw------- 1 boinc boinc    552960 Jun  4 10:33 result.tar.gz
[2025-06-04 10:33:38] -rw------- 1 boinc boinc       653 Jun  4 10:33 lutLDm6pwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQsaKDmXxw1Tn.diag
[2025-06-04 10:33:38] -rw-r--r-- 1 boinc boinc     20575 Jun  4 10:33 stderr.txt
[2025-06-04 10:33:38] HITS file was successfully produced:
[2025-06-04 10:33:38] -rw------- 1 boinc boinc 182508225 Jun  4 10:32 shared/HITS.pool.root.1
[2025-06-04 10:33:38]  *** Contents of shared directory: ***
[2025-06-04 10:33:38] total 388328
[2025-06-04 10:33:38] -rw-r--r-- 2 boinc boinc     15093 Jun  4 10:04 start_atlas.sh
[2025-06-04 10:33:38] -rw-r--r-- 2 boinc boinc    508877 Jun  4 10:04 input.tar.gz
[2025-06-04 10:33:38] -rw-r--r-- 2 boinc boinc 214055240 Jun  4 10:04 ATLAS.root_0
[2025-06-04 10:33:38] -rw------- 1 boinc boinc 182508225 Jun  4 10:32 HITS.pool.root.1
[2025-06-04 10:33:38] -rw------- 1 boinc boinc    552960 Jun  4 10:33 result.tar.gz
10:33:39 (19546): run_atlas exited; CPU time 18453.998660
10:33:39 (19546): called boinc_finish(0)

</stderr_txt>
]]>

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