Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:26:54 (1640415): wrapper (7.7.26015): starting
13:26:54 (1640415): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 13:26:54] Arguments: --nthreads 12
[2025-06-04 13:26:54] Threads: 12
[2025-06-04 13:26:54] Checking for CVMFS
[2025-06-04 13:26:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:26:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:26:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:26:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:26:58] 2.12.7.0 29207 1967 76768 146781 0 184 2022890 4096000 17275 130560 17 25641164 99.999 473714 147 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 13:26:58] CVMFS is ok
[2025-06-04 13:26:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:26:58] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 13:26:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 13:26:58] Further information can be found at the LHC@home message board.
[2025-06-04 13:26:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:26:58] Checking for apptainer binary...
[2025-06-04 13:26:58] apptainer is not installed, using version from CVMFS
[2025-06-04 13:26:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:27:00] epyc7v12
[2025-06-04 13:27:00] apptainer works
[2025-06-04 13:27:00] Set ATHENA_PROC_NUMBER=12
[2025-06-04 13:27:00] Set ATHENA_CORE_NUMBER=12
[2025-06-04 13:27:00] Starting ATLAS job with PandaID=6678365326
[2025-06-04 13:27:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:27:50]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:27:50] 2025-06-04 15:27:23,835 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:27:50] 2025-06-04 15:27:23,835 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:27:50] 2025-06-04 15:27:23,835 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:27:50] 2025-06-04 15:27:23,835 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:27:50] 2025-06-04 15:27:23,842 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:27:50] 2025-06-04 15:27:23,843 | INFO     | sum of square deviations: 435609235.99107105
[2025-06-04 15:27:50] 2025-06-04 15:27:23,843 | INFO     | sum of deviations: 62046050070.875
[2025-06-04 15:27:50] 2025-06-04 15:27:23,843 | INFO     | mean x: 1749047383.5089285
[2025-06-04 15:27:50] 2025-06-04 15:27:23,844 | INFO     | mean y: 2446604.125
[2025-06-04 15:27:50] 2025-06-04 15:27:23,844 | INFO     | -- intersect: -249123312372.5564
[2025-06-04 15:27:50] 2025-06-04 15:27:23,844 | INFO     | intersect: -249123312372.5564
[2025-06-04 15:27:50] 2025-06-04 15:27:23,844 | INFO     | chi2: 8.175190939016534
[2025-06-04 15:27:50] 2025-06-04 15:27:23,844 | INFO     | sum of square deviations: 379831750.9906545
[2025-06-04 15:27:50] 2025-06-04 15:27:23,845 | INFO     | sum of deviations: 65723671011.74764
[2025-06-04 15:27:50] 2025-06-04 15:27:23,845 | INFO     | mean x: 1749047231.0093458
[2025-06-04 15:27:50] 2025-06-04 15:27:23,849 | INFO     | mean y: 2455883.2523364485
[2025-06-04 15:27:50] 2025-06-04 15:27:23,850 | INFO     | -- intersect: -302641555564.05493
[2025-06-04 15:27:50] 2025-06-04 15:27:23,850 | INFO     | intersect: -302641555564.05493
[2025-06-04 15:27:50] 2025-06-04 15:27:23,850 | INFO     | chi2: 7.521718650975226
[2025-06-04 15:27:50] 2025-06-04 15:27:23,850 | INFO     | current chi2=7.521718650975226 (change=7.993358111338752 %)
[2025-06-04 15:27:50] 2025-06-04 15:27:23,850 | INFO     | right removable region: 106
[2025-06-04 15:27:50] 2025-06-04 15:27:23,850 | INFO     | sum of square deviations: 379831140.9906545
[2025-06-04 15:27:50] 2025-06-04 15:27:23,851 | INFO     | sum of deviations: 23008065135.85046
[2025-06-04 15:27:50] 2025-06-04 15:27:23,851 | INFO     | mean x: 1749047536.0093458
[2025-06-04 15:27:50] 2025-06-04 15:27:23,851 | INFO     | mean y: 2553241.14953271
[2025-06-04 15:27:50] 2025-06-04 15:27:23,851 | INFO     | -- intersect: -105945051605.68925
[2025-06-04 15:27:50] 2025-06-04 15:27:23,851 | INFO     | intersect: -105945051605.68925
[2025-06-04 15:27:50] 2025-06-04 15:27:23,852 | INFO     | chi2: 2.916898301402885
[2025-06-04 15:27:50] 2025-06-04 15:27:23,852 | INFO     | current chi2=2.916898301402885 (change=64.32012018848597 %)
[2025-06-04 15:27:50] 2025-06-04 15:27:23,852 | INFO     | sum of square deviations: 329029883.49019575
[2025-06-04 15:27:50] 2025-06-04 15:27:23,853 | INFO     | sum of deviations: -1533604018.5686283
[2025-06-04 15:27:50] 2025-06-04 15:27:23,853 | INFO     | mean x: 1749047688.509804
[2025-06-04 15:27:50] 2025-06-04 15:27:23,853 | INFO     | mean y: 2626389.568627451
[2025-06-04 15:27:50] 2025-06-04 15:27:23,853 | INFO     | -- intersect: 8154914975.984314
[2025-06-04 15:27:50] 2025-06-04 15:27:23,853 | INFO     | intersect: 8154914975.984314
[2025-06-04 15:27:50] 2025-06-04 15:27:23,857 | INFO     | chi2: 0.9634905830361691
[2025-06-04 15:27:50] 2025-06-04 15:27:23,857 | INFO     | current chi2=0.9634905830361691 (change=66.96866042354725 %)
[2025-06-04 15:27:50] 2025-06-04 15:27:23,858 | INFO     | sum of square deviations: 282972900.9896903
[2025-06-04 15:27:50] 2025-06-04 15:27:23,858 | INFO     | sum of deviations: -8979811007.329903
[2025-06-04 15:27:50] 2025-06-04 15:27:23,858 | INFO     | mean x: 1749047841.0103092
[2025-06-04 15:27:50] 2025-06-04 15:27:23,859 | INFO     | mean y: 2650913.3298969073
[2025-06-04 15:27:50] 2025-06-04 15:27:23,859 | INFO     | -- intersect: 55506619668.35639
[2025-06-04 15:27:50] 2025-06-04 15:27:23,859 | INFO     | intersect: 55506619668.35639
[2025-06-04 15:27:50] 2025-06-04 15:27:23,859 | INFO     | chi2: 0.7725820845300372
[2025-06-04 15:27:50] 2025-06-04 15:27:23,859 | INFO     | current chi2=0.7725820845300372 (change=19.814256814481524 %)
[2025-06-04 15:27:50] 2025-06-04 15:27:23,859 | INFO     | left removable region: 30
[2025-06-04 15:27:50] 2025-06-04 15:27:23,859 | INFO     | sum of square deviations: 136093318.98684177
[2025-06-04 15:27:50] 2025-06-04 15:27:23,860 | INFO     | sum of deviations: -944709126.4473686
[2025-06-04 15:27:50] 2025-06-04 15:27:23,860 | INFO     | mean x: 1749048115.5131578
[2025-06-04 15:27:50] 2025-06-04 15:27:23,860 | INFO     | mean y: 2663256.447368421
[2025-06-04 15:27:50] 2025-06-04 15:27:23,860 | INFO     | -- intersect: 12143903764.224306
[2025-06-04 15:27:50] 2025-06-04 15:27:23,860 | INFO     | intersect: 12143903764.224306
[2025-06-04 15:27:50] 2025-06-04 15:27:23,861 | INFO     | chi2: 0.0005935123593690399
[2025-06-04 15:27:50] 2025-06-04 15:27:23,861 | INFO     | -- intersect: 12143903764.224306
[2025-06-04 15:27:50] 2025-06-04 15:27:23,861 | INFO     | current memory leak: -6.94 B/s (using 76 data points, chi2=0.00)
[2025-06-04 15:27:50] 2025-06-04 15:27:23,873 | INFO     | ..............................
[2025-06-04 15:27:50] 2025-06-04 15:27:23,874 | INFO     | . Timing measurements:
[2025-06-04 15:27:50] 2025-06-04 15:27:23,874 | INFO     | . get job = 0 s
[2025-06-04 15:27:50] 2025-06-04 15:27:23,874 | INFO     | . initial setup = 24 s
[2025-06-04 15:27:50] 2025-06-04 15:27:23,874 | INFO     | . payload setup = 100 s
[2025-06-04 15:27:50] 2025-06-04 15:27:23,874 | INFO     | . stage-in = 0 s
[2025-06-04 15:27:50] 2025-06-04 15:27:23,874 | INFO     | . payload execution = 6835 s
[2025-06-04 15:27:50] 2025-06-04 15:27:23,874 | INFO     | . stage-out = 2 s
[2025-06-04 15:27:50] 2025-06-04 15:27:23,874 | INFO     | . log creation = 0 s
[2025-06-04 15:27:50] 2025-06-04 15:27:23,874 | INFO     | ..............................
[2025-06-04 15:27:50] 2025-06-04 15:27:24,413 | INFO     | 
[2025-06-04 15:27:50] 2025-06-04 15:27:24,414 | INFO     | job summary report
[2025-06-04 15:27:50] 2025-06-04 15:27:24,414 | INFO     | --------------------------------------------------
[2025-06-04 15:27:50] 2025-06-04 15:27:24,414 | INFO     | PanDA job id: 6678365326
[2025-06-04 15:27:50] 2025-06-04 15:27:24,414 | INFO     | task id: 45006595
[2025-06-04 15:27:50] 2025-06-04 15:27:24,414 | INFO     | errors: (none)
[2025-06-04 15:27:50] 2025-06-04 15:27:24,414 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:27:50] 2025-06-04 15:27:24,414 | INFO     | pilot state: finished 
[2025-06-04 15:27:50] 2025-06-04 15:27:24,414 | INFO     | transexitcode: 0
[2025-06-04 15:27:50] 2025-06-04 15:27:24,414 | INFO     | exeerrorcode: 0
[2025-06-04 15:27:50] 2025-06-04 15:27:24,415 | INFO     | exeerrordiag: 
[2025-06-04 15:27:50] 2025-06-04 15:27:24,415 | INFO     | exitcode: 0
[2025-06-04 15:27:50] 2025-06-04 15:27:24,415 | INFO     | exitmsg: OK
[2025-06-04 15:27:50] 2025-06-04 15:27:24,415 | INFO     | cpuconsumptiontime: 40751 s
[2025-06-04 15:27:50] 2025-06-04 15:27:24,415 | INFO     | nevents: 400
[2025-06-04 15:27:50] 2025-06-04 15:27:24,415 | INFO     | neventsw: 0
[2025-06-04 15:27:50] 2025-06-04 15:27:24,415 | INFO     | pid: 1651932
[2025-06-04 15:27:50] 2025-06-04 15:27:24,415 | INFO     | pgrp: 1651932
[2025-06-04 15:27:50] 2025-06-04 15:27:24,415 | INFO     | corecount: 12
[2025-06-04 15:27:50] 2025-06-04 15:27:24,415 | INFO     | event service: False
[2025-06-04 15:27:50] 2025-06-04 15:27:24,416 | INFO     | sizes: {0: 2396513, 1: 2397222, 2: 2397421, 13: 2397421, 24: 2397477, 34: 2397505, 45: 2397661, 54: 2397895, 56: 2397923, 6939: 2424800, 6940: 2424799, 6942: 24341
[2025-06-04 15:27:50] 2025-06-04 15:27:24,416 | INFO     | --------------------------------------------------
[2025-06-04 15:27:50] 2025-06-04 15:27:24,416 | INFO     | 
[2025-06-04 15:27:50] 2025-06-04 15:27:24,416 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/15
[2025-06-04 15:27:50] 2025-06-04 15:27:24,606 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,606 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,606 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,606 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,608 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,608 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:27:50] 2025-06-04 15:27:24,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,608 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:27:50] 2025-06-04 15:27:24,608 | INFO     | job 6678365326 has completed (purged errors)
[2025-06-04 15:27:50] 2025-06-04 15:27:24,609 | INFO     | overall cleanup function is called
[2025-06-04 15:27:50] 2025-06-04 15:27:25,216 | INFO     | PID=1644554 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 15:27:50] 2025-06-04 15:27:25,216 | INFO     | .. there are 20 such processes running
[2025-06-04 15:27:50] 2025-06-04 15:27:25,637 | INFO     | --- collectZombieJob: --- 10, [1651932]
[2025-06-04 15:27:50] 2025-06-04 15:27:25,638 | INFO     | zombie collector waiting for pid 1651932
[2025-06-04 15:27:50] 2025-06-04 15:27:25,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:27:50] 2025-06-04 15:27:25,638 | INFO     | collected zombie processes
[2025-06-04 15:27:50] 2025-06-04 15:27:25,638 | INFO     | will attempt to kill all subprocesses of pid=1651932
[2025-06-04 15:27:50] 2025-06-04 15:27:26,978 | INFO     | process IDs to be killed: [1651932] (in reverse order)
[2025-06-04 15:27:50] 2025-06-04 15:27:29,348 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:27:50] 2025-06-04 15:27:29,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:27:50] 2025-06-04 15:27:29,391 | INFO     | did not find any defunct processes belonging to 1651932
[2025-06-04 15:27:50] 2025-06-04 15:27:29,445 | INFO     | did not find any defunct processes belonging to 1651932
[2025-06-04 15:27:50] 2025-06-04 15:27:29,445 | INFO     | ready for new job
[2025-06-04 15:27:50] 2025-06-04 15:27:29,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:27:50] 2025-06-04 15:27:29,451 | INFO     | **************************************
[2025-06-04 15:27:50] 2025-06-04 15:27:29,451 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:27:50] 2025-06-04 15:27:29,452 | INFO     | **************************************
[2025-06-04 15:27:50] 2025-06-04 15:27:29,452 | INFO     | 
[2025-06-04 15:27:50] 2025-06-04 15:27:29,488 | INFO     | architecture information:
[2025-06-04 15:27:50] 2025-06-04 15:27:29,494 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:27:50] 2025-06-04 15:27:29,742 | INFO     | cat /etc/os-release:
[2025-06-04 15:27:50] NAME="CentOS Linux"
[2025-06-04 15:27:50] VERSION="7 (Core)"
[2025-06-04 15:27:50] ID="centos"
[2025-06-04 15:27:50] ID_LIKE="rhel fedora"
[2025-06-04 15:27:50] VERSION_ID="7"
[2025-06-04 15:27:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:27:50] ANSI_COLOR="0;31"
[2025-06-04 15:27:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:27:50] HOME_URL="https://www.centos.org/"
[2025-06-04 15:27:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:27:50] 
[2025-06-04 15:27:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:27:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:27:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:27:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:27:50] 
[2025-06-04 15:27:50] 2025-06-04 15:27:29,743 | INFO     | **************************************
[2025-06-04 15:27:50] 2025-06-04 15:27:30,250 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/15
[2025-06-04 15:27:50] 2025-06-04 15:27:30,358 | INFO     | sufficient remaining disk space (315313094656 B)
[2025-06-04 15:27:50] 2025-06-04 15:27:30,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:27:50] 2025-06-04 15:27:30,358 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:27:50] 2025-06-04 15:27:30,359 | INFO     | update_server=False
[2025-06-04 15:27:50] 2025-06-04 15:27:30,359 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:27:50] 2025-06-04 15:27:30,359 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:27:50] 2025-06-04 15:27:30,359 | INFO     | aborting loop
[2025-06-04 15:27:50] 2025-06-04 15:27:30,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:27:50] 2025-06-04 15:27:30,424 | INFO     | all job control threads have been joined
[2025-06-04 15:27:50] 2025-06-04 15:27:30,849 | INFO     | all payload control threads have been joined
[2025-06-04 15:27:50] 2025-06-04 15:27:31,165 | INFO     | all data control threads have been joined
[2025-06-04 15:27:50] 2025-06-04 15:27:31,242 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:27:50] 2025-06-04 15:27:31,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:27:50] 2025-06-04 15:27:31,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:27:50] 2025-06-04 15:27:31,366 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:31,366 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:31,430 | INFO     | [job] control thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:31,650 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:31,821 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:27:50] 2025-06-04 15:27:31,857 | INFO     | [payload] control thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:32,174 | INFO     | [data] control thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:32,233 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:32,366 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:32,473 | INFO     | [job] validate thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:32,474 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:32,557 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:32,581 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:32,821 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:33,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:27:50] 2025-06-04 15:27:34,278 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:35,837 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:40,749 | INFO     | job.realtimelogging is not enabled
[2025-06-04 15:27:50] 2025-06-04 15:27:41,753 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:27:50] 2025-06-04 15:27:43,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140720065988416)>', '<ExcThread(monitor, started 140719494784768)>']
[2025-06-04 15:27:50] 2025-06-04 15:27:43,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:27:50] 2025-06-04 15:27:43,306 | INFO     | [monitor] control thread has ended
[2025-06-04 15:27:50] 2025-06-04 15:27:48,313 | INFO     | all workflow threads have been joined
[2025-06-04 15:27:50] 2025-06-04 15:27:48,314 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:27:50] 2025-06-04 15:27:48,314 | INFO     | traces error code: 0
[2025-06-04 15:27:50] 2025-06-04 15:27:48,314 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:27:50] 2025-06-04 15:27:48,838 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:27:50] 2025-06-04 15:27:48,882 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:27:50] 2025-06-04 15:27:48,903 [wrapper] pilotpid: 1644554
[2025-06-04 15:27:50] 2025-06-04 15:27:48,923 [wrapper] Pilot exit status: 0
[2025-06-04 15:27:50] 2025-06-04 15:27:49,065 [wrapper] pandaids: 6678365326
[2025-06-04 15:27:50] 2025-06-04 15:27:49,573 [wrapper] cleanup supervisor_pilot 2194398 1644555
[2025-06-04 15:27:50] 2025-06-04 15:27:49,618 [wrapper] Test setup, not cleaning
[2025-06-04 15:27:50] 2025-06-04 15:27:49,673 [wrapper] apfmon messages muted
[2025-06-04 15:27:50] 2025-06-04 15:27:49,714 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:27:50] 2025-06-04 15:27:49,762 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:27:50]  *** Error codes and diagnostics ***
[2025-06-04 15:27:50]     "exeErrorCode": 0,
[2025-06-04 15:27:50]     "exeErrorDiag": "",
[2025-06-04 15:27:50]     "pilotErrorCode": 0,
[2025-06-04 15:27:50]     "pilotErrorDiag": "",
[2025-06-04 15:27:50]  *** Listing of results directory ***
[2025-06-04 15:27:50] total 391976
[2025-06-04 15:27:50] -rw-r--r-- 1 boinc boinc    495897 Jun  4 05:59 pilot3.tar.gz
[2025-06-04 15:27:50] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:31 queuedata.json
[2025-06-04 15:27:50] -rwx------ 1 boinc boinc     37140 Jun  4 06:32 runpilot2-wrapper.sh
[2025-06-04 15:27:50] -rw-rw-r-- 1 boinc boinc       100 Jun  4 13:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:27:50] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 13:26 run_atlas
[2025-06-04 15:27:50] -rw-rw-r-- 1 boinc boinc       105 Jun  4 13:26 job.xml
[2025-06-04 15:27:50] -rw-rw-r-- 1 boinc boinc      6951 Jun  4 13:26 init_data.xml
[2025-06-04 15:27:50] -rw-r--r-- 2 boinc boinc 214243930 Jun  4 13:26 EVNT.45006593._002175.pool.root.1
[2025-06-04 15:27:50] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:26 start_atlas.sh
[2025-06-04 15:27:50] drwxrwx--x 2 boinc boinc      4096 Jun  4 13:26 shared
[2025-06-04 15:27:50] -rw-r--r-- 2 boinc boinc    508885 Jun  4 13:26 input.tar.gz
[2025-06-04 15:27:50] -rw-rw-r-- 1 boinc boinc         0 Jun  4 13:26 boinc_lockfile
[2025-06-04 15:27:50] -rw-rw-r-- 1 boinc boinc      2524 Jun  4 13:27 pandaJob.out
[2025-06-04 15:27:50] -rw------- 1 boinc boinc    986819 Jun  4 13:28 agis_schedconf.cvmfs.json
[2025-06-04 15:27:50] -rw------- 1 boinc boinc   1598969 Jun  4 13:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:27:50] drwx------ 4 boinc boinc      4096 Jun  4 13:29 pilot3
[2025-06-04 15:27:50] -rw------- 1 boinc boinc 181296463 Jun  4 15:21 HITS.45006595._054357.pool.root.1
[2025-06-04 15:27:50] -rw-rw-r-- 1 boinc boinc       530 Jun  4 15:25 boinc_task_state.xml
[2025-06-04 15:27:50] -rw------- 1 boinc boinc      1036 Jun  4 15:26 memory_monitor_summary.json
[2025-06-04 15:27:50] -rw------- 1 boinc boinc    394932 Jun  4 15:26 log.45006595._054357.job.log.tgz.1
[2025-06-04 15:27:50] -rw------- 1 boinc boinc        95 Jun  4 15:26 pilot_heartbeat.json
[2025-06-04 15:27:50] -rw------- 1 boinc boinc      7657 Jun  4 15:27 heartbeat.json
[2025-06-04 15:27:50] -rw------- 1 boinc boinc      4450 Jun  4 15:27 pilotlog.txt
[2025-06-04 15:27:50] -rw------- 1 boinc boinc    611606 Jun  4 15:27 log.45006595._054357.job.log.1
[2025-06-04 15:27:50] -rw------- 1 boinc boinc       357 Jun  4 15:27 output.list
[2025-06-04 15:27:50] -rw-rw-r-- 1 boinc boinc       620 Jun  4 15:27 runtime_log
[2025-06-04 15:27:50] -rw------- 1 boinc boinc   1024000 Jun  4 15:27 result.tar.gz
[2025-06-04 15:27:50] -rw-rw-r-- 1 boinc boinc      8977 Jun  4 15:27 runtime_log.err
[2025-06-04 15:27:50] -rw------- 1 boinc boinc       651 Jun  4 15:27 nlrMDm4qwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIXnKDmvOGFNm.diag
[2025-06-04 15:27:50] -rw-rw-r-- 1 boinc boinc      8192 Jun  4 15:27 boinc_mmap_file
[2025-06-04 15:27:50] -rw-rw-r-- 1 boinc boinc        27 Jun  4 15:27 wrapper_checkpoint.txt
[2025-06-04 15:27:50] -rw-rw-r-- 1 boinc boinc     21144 Jun  4 15:27 stderr.txt
[2025-06-04 15:27:50] HITS file was successfully produced:
[2025-06-04 15:27:50] -rw------- 1 boinc boinc 181296463 Jun  4 15:21 shared/HITS.pool.root.1
[2025-06-04 15:27:50]  *** Contents of shared directory: ***
[2025-06-04 15:27:50] total 387796
[2025-06-04 15:27:50] -rw-r--r-- 2 boinc boinc 214243930 Jun  4 13:26 ATLAS.root_0
[2025-06-04 15:27:50] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:26 start_atlas.sh
[2025-06-04 15:27:50] -rw-r--r-- 2 boinc boinc    508885 Jun  4 13:26 input.tar.gz
[2025-06-04 15:27:50] -rw------- 1 boinc boinc 181296463 Jun  4 15:21 HITS.pool.root.1
[2025-06-04 15:27:50] -rw------- 1 boinc boinc   1024000 Jun  4 15:27 result.tar.gz
15:27:52 (1640415): run_atlas exited; CPU time 41118.277363
15:27:52 (1640415): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN