Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:02:36 (1823074): wrapper (7.7.26015): starting
17:02:36 (1823074): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 17:02:37] Arguments: --nthreads 12
[2025-06-06 17:02:37] Threads: 12
[2025-06-06 17:02:37] Checking for CVMFS
[2025-06-06 17:02:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 17:02:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 17:02:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 17:02:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 17:02:40] 2.12.7.0 359462 4774 64988 146868 3 187 3181233 4096001 912 130560 0 3946785 99.991 1112720 130 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 17:02:40] CVMFS is ok
[2025-06-06 17:02:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 17:02:40] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 17:02:40] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 17:02:40] Further information can be found at the LHC@home message board.
[2025-06-06 17:02:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 17:02:40] Checking for apptainer binary...
[2025-06-06 17:02:40] apptainer is not installed, using version from CVMFS
[2025-06-06 17:02:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 17:02:41] ggg3250
[2025-06-06 17:02:41] apptainer works
[2025-06-06 17:02:41] Set ATHENA_PROC_NUMBER=12
[2025-06-06 17:02:41] Set ATHENA_CORE_NUMBER=12
[2025-06-06 17:02:41] Starting ATLAS job with PandaID=6678364630
[2025-06-06 17:02:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 21:29:39]  *** The last 200 lines of the pilot log: ***
[2025-06-06 21:29:39] 2025-06-06 21:29:22,124 | INFO     | mean x: 1749237298.0358565
[2025-06-06 21:29:39] 2025-06-06 21:29:22,124 | INFO     | mean y: 2607049.167330677
[2025-06-06 21:29:39] 2025-06-06 21:29:22,124 | INFO     | -- intersect: -45644887349.265114
[2025-06-06 21:29:39] 2025-06-06 21:29:22,124 | INFO     | intersect: -45644887349.265114
[2025-06-06 21:29:39] 2025-06-06 21:29:22,124 | INFO     | chi2: 4.734944768231316
[2025-06-06 21:29:39] 2025-06-06 21:29:22,124 | INFO     | current chi2=4.734944768231316 (change=-0.06056781012975861 %)
[2025-06-06 21:29:39] 2025-06-06 21:29:22,124 | INFO     | right removable region: 250
[2025-06-06 21:29:39] 2025-06-06 21:29:22,124 | INFO     | sum of square deviations: 4903354224.677273
[2025-06-06 21:29:39] 2025-06-06 21:29:22,125 | INFO     | sum of deviations: 45659730098.4024
[2025-06-06 21:29:39] 2025-06-06 21:29:22,125 | INFO     | mean x: 1749237603.0358565
[2025-06-06 21:29:39] 2025-06-06 21:29:22,125 | INFO     | mean y: 2651749.733067729
[2025-06-06 21:29:39] 2025-06-06 21:29:22,125 | INFO     | -- intersect: -16286140202.239439
[2025-06-06 21:29:39] 2025-06-06 21:29:22,125 | INFO     | intersect: -16286140202.239439
[2025-06-06 21:29:39] 2025-06-06 21:29:22,125 | INFO     | chi2: 0.9333625843671518
[2025-06-06 21:29:39] 2025-06-06 21:29:22,125 | INFO     | current chi2=0.9333625843671518 (change=80.27584380896735 %)
[2025-06-06 21:29:39] 2025-06-06 21:29:22,126 | INFO     | sum of square deviations: 4616118187.170732
[2025-06-06 21:29:39] 2025-06-06 21:29:22,139 | INFO     | sum of deviations: 9967068875.048769
[2025-06-06 21:29:39] 2025-06-06 21:29:22,139 | INFO     | mean x: 1749237755.5365853
[2025-06-06 21:29:39] 2025-06-06 21:29:22,139 | INFO     | mean y: 2670631.43902439
[2025-06-06 21:29:39] 2025-06-06 21:29:22,139 | INFO     | -- intersect: -3774263251.390095
[2025-06-06 21:29:39] 2025-06-06 21:29:22,139 | INFO     | intersect: -3774263251.390095
[2025-06-06 21:29:39] 2025-06-06 21:29:22,139 | INFO     | chi2: 0.23594005337940638
[2025-06-06 21:29:39] 2025-06-06 21:29:22,139 | INFO     | current chi2=0.23594005337940638 (change=74.72150080460094 %)
[2025-06-06 21:29:39] 2025-06-06 21:29:22,139 | INFO     | sum of square deviations: 4340324224.663915
[2025-06-06 21:29:39] 2025-06-06 21:29:22,140 | INFO     | sum of deviations: -7395725996.618255
[2025-06-06 21:29:39] 2025-06-06 21:29:22,140 | INFO     | mean x: 1749237908.0373445
[2025-06-06 21:29:39] 2025-06-06 21:29:22,140 | INFO     | mean y: 2680211.846473029
[2025-06-06 21:29:39] 2025-06-06 21:29:22,140 | INFO     | -- intersect: 2983306451.063352
[2025-06-06 21:29:39] 2025-06-06 21:29:22,140 | INFO     | intersect: 2983306451.063352
[2025-06-06 21:29:39] 2025-06-06 21:29:22,140 | INFO     | chi2: 0.07470026397657348
[2025-06-06 21:29:39] 2025-06-06 21:29:22,141 | INFO     | current chi2=0.07470026397657348 (change=68.33930360418678 %)
[2025-06-06 21:29:39] 2025-06-06 21:29:22,141 | INFO     | sum of square deviations: 4075739774.656787
[2025-06-06 21:29:39] 2025-06-06 21:29:22,141 | INFO     | sum of deviations: -13105456705.978811
[2025-06-06 21:29:39] 2025-06-06 21:29:22,142 | INFO     | mean x: 1749238060.5381355
[2025-06-06 21:29:39] 2025-06-06 21:29:22,142 | INFO     | mean y: 2683460.275423729
[2025-06-06 21:29:39] 2025-06-06 21:29:22,142 | INFO     | -- intersect: 5627322161.05296
[2025-06-06 21:29:39] 2025-06-06 21:29:22,142 | INFO     | intersect: 5627322161.05296
[2025-06-06 21:29:39] 2025-06-06 21:29:22,142 | INFO     | chi2: 0.024008674329207346
[2025-06-06 21:29:39] 2025-06-06 21:29:22,142 | INFO     | current chi2=0.024008674329207346 (change=67.8599872997281 %)
[2025-06-06 21:29:39] 2025-06-06 21:29:22,142 | INFO     | sum of square deviations: 3822146791.7229524
[2025-06-06 21:29:39] 2025-06-06 21:29:22,167 | INFO     | sum of deviations: -13017213081.935064
[2025-06-06 21:29:39] 2025-06-06 21:29:22,167 | INFO     | mean x: 1749238213.034632
[2025-06-06 21:29:39] 2025-06-06 21:29:22,167 | INFO     | mean y: 2683406.116883117
[2025-06-06 21:29:39] 2025-06-06 21:29:22,167 | INFO     | -- intersect: 5960122455.670169
[2025-06-06 21:29:39] 2025-06-06 21:29:22,167 | INFO     | intersect: 5960122455.670169
[2025-06-06 21:29:39] 2025-06-06 21:29:22,167 | INFO     | chi2: 0.023680999035999902
[2025-06-06 21:29:39] 2025-06-06 21:29:22,167 | INFO     | current chi2=0.023680999035999902 (change=1.3648204341245784 %)
[2025-06-06 21:29:39] 2025-06-06 21:29:22,168 | INFO     | left removable region: 50
[2025-06-06 21:29:39] 2025-06-06 21:29:22,168 | INFO     | sum of square deviations: 2480605389.6800036
[2025-06-06 21:29:39] 2025-06-06 21:29:22,168 | INFO     | sum of deviations: -4840594115.3
[2025-06-06 21:29:39] 2025-06-06 21:29:22,168 | INFO     | mean x: 1749238792.54
[2025-06-06 21:29:39] 2025-06-06 21:29:22,168 | INFO     | mean y: 2677730.225
[2025-06-06 21:29:39] 2025-06-06 21:29:22,168 | INFO     | -- intersect: 3416100534.4525943
[2025-06-06 21:29:39] 2025-06-06 21:29:22,168 | INFO     | intersect: 3416100534.4525943
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | chi2: 0.01983134204443004
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | -- intersect: 3416100534.4525943
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | current memory leak: -1.95 B/s (using 200 data points, chi2=0.02)
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | ..............................
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | . Timing measurements:
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | . get job = 0 s
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | . initial setup = 5 s
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | . payload setup = 96 s
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | . stage-in = 0 s
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | . payload execution = 15656 s
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | . stage-out = 0 s
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | . log creation = 0 s
[2025-06-06 21:29:39] 2025-06-06 21:29:22,169 | INFO     | ..............................
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | 
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | job summary report
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | --------------------------------------------------
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | PanDA job id: 6678364630
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | task id: 45006595
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | errors: (none)
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | pilot state: finished 
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | transexitcode: 0
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | exeerrorcode: 0
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | exeerrordiag: 
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | exitcode: 0
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | exitmsg: OK
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | cpuconsumptiontime: 20715 s
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | nevents: 400
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | neventsw: 0
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | pid: 1833081
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | pgrp: 1833081
[2025-06-06 21:29:39] 2025-06-06 21:29:22,431 | INFO     | corecount: 12
[2025-06-06 21:29:39] 2025-06-06 21:29:22,432 | INFO     | event service: False
[2025-06-06 21:29:39] 2025-06-06 21:29:22,432 | INFO     | sizes: {0: 2397194, 1: 2397393, 2: 2397393, 12: 2397421, 23: 2397449, 34: 2397477, 36: 2397839, 45: 2397867, 15756: 2428504, 15757: 2437491, 15760: 2437547, 15833:
[2025-06-06 21:29:39] 2025-06-06 21:29:22,432 | INFO     | --------------------------------------------------
[2025-06-06 21:29:39] 2025-06-06 21:29:22,432 | INFO     | 
[2025-06-06 21:29:39] 2025-06-06 21:29:22,432 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,488 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,488 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,488 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 21:29:39] 2025-06-06 21:29:22,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,488 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 21:29:39] 2025-06-06 21:29:22,488 | INFO     | job 6678364630 has completed (purged errors)
[2025-06-06 21:29:39] 2025-06-06 21:29:22,488 | INFO     | overall cleanup function is called
[2025-06-06 21:29:39] 2025-06-06 21:29:23,494 | INFO     | --- collectZombieJob: --- 10, [1833081]
[2025-06-06 21:29:39] 2025-06-06 21:29:23,495 | INFO     | zombie collector waiting for pid 1833081
[2025-06-06 21:29:39] 2025-06-06 21:29:23,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 21:29:39] 2025-06-06 21:29:23,495 | INFO     | collected zombie processes
[2025-06-06 21:29:39] 2025-06-06 21:29:23,495 | INFO     | will attempt to kill all subprocesses of pid=1833081
[2025-06-06 21:29:39] 2025-06-06 21:29:23,647 | INFO     | process IDs to be killed: [1833081] (in reverse order)
[2025-06-06 21:29:39] 2025-06-06 21:29:23,697 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 21:29:39] 2025-06-06 21:29:23,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 21:29:39] 2025-06-06 21:29:23,698 | INFO     | did not find any defunct processes belonging to 1833081
[2025-06-06 21:29:39] 2025-06-06 21:29:23,703 | INFO     | did not find any defunct processes belonging to 1833081
[2025-06-06 21:29:39] 2025-06-06 21:29:23,703 | INFO     | ready for new job
[2025-06-06 21:29:39] 2025-06-06 21:29:23,703 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 21:29:39] 2025-06-06 21:29:23,704 | INFO     | **************************************
[2025-06-06 21:29:39] 2025-06-06 21:29:23,704 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 21:29:39] 2025-06-06 21:29:23,704 | INFO     | **************************************
[2025-06-06 21:29:39] 2025-06-06 21:29:23,704 | INFO     | 
[2025-06-06 21:29:39] 2025-06-06 21:29:23,723 | INFO     | architecture information:
[2025-06-06 21:29:39] 2025-06-06 21:29:23,727 | INFO     | executing command: cat /etc/os-release
[2025-06-06 21:29:39] 2025-06-06 21:29:23,819 | INFO     | cat /etc/os-release:
[2025-06-06 21:29:39] NAME="CentOS Linux"
[2025-06-06 21:29:39] VERSION="7 (Core)"
[2025-06-06 21:29:39] ID="centos"
[2025-06-06 21:29:39] ID_LIKE="rhel fedora"
[2025-06-06 21:29:39] VERSION_ID="7"
[2025-06-06 21:29:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 21:29:39] ANSI_COLOR="0;31"
[2025-06-06 21:29:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 21:29:39] HOME_URL="https://www.centos.org/"
[2025-06-06 21:29:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 21:29:39] 
[2025-06-06 21:29:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 21:29:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 21:29:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 21:29:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 21:29:39] 
[2025-06-06 21:29:39] 2025-06-06 21:29:23,819 | INFO     | **************************************
[2025-06-06 21:29:39] 2025-06-06 21:29:24,323 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-06-06 21:29:39] 2025-06-06 21:29:24,495 | INFO     | sufficient remaining disk space (189189324800 B)
[2025-06-06 21:29:39] 2025-06-06 21:29:24,495 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 21:29:39] 2025-06-06 21:29:24,495 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 21:29:39] 2025-06-06 21:29:24,495 | INFO     | update_server=False
[2025-06-06 21:29:39] 2025-06-06 21:29:24,495 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 21:29:39] 2025-06-06 21:29:24,495 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 21:29:39] 2025-06-06 21:29:24,495 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 21:29:39] 2025-06-06 21:29:24,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 21:29:39] 2025-06-06 21:29:24,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 21:29:39] 2025-06-06 21:29:24,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 21:29:39] 2025-06-06 21:29:24,496 | INFO     | aborting loop
[2025-06-06 21:29:39] 2025-06-06 21:29:25,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 21:29:39] 2025-06-06 21:29:25,254 | INFO     | all payload control threads have been joined
[2025-06-06 21:29:39] 2025-06-06 21:29:25,362 | INFO     | all data control threads have been joined
[2025-06-06 21:29:39] 2025-06-06 21:29:25,499 | INFO     | [job] retrieve thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:25,499 | INFO     | [job] job monitor thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:25,502 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:25,699 | INFO     | [payload] validate_post thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:25,950 | INFO     | all job control threads have been joined
[2025-06-06 21:29:39] 2025-06-06 21:29:26,258 | INFO     | [payload] failed_post thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:26,259 | INFO     | [payload] control thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:26,366 | INFO     | [data] control thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:26,458 | INFO     | [job] validate thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:26,459 | INFO     | [data] copytool_in thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:26,486 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:26,614 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:26,878 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:26,954 | INFO     | [job] control thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:27,186 | INFO     | [data] copytool_out thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:27,450 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 21:29:39] 2025-06-06 21:29:27,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 21:29:39] 2025-06-06 21:29:28,454 | INFO     | [job] queue monitor thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:31,534 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 21:29:39] 2025-06-06 21:29:32,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139921330841408)>', '<ExcThread(monitor, started 139920739907328)>']
[2025-06-06 21:29:39] 2025-06-06 21:29:32,526 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 21:29:39] 2025-06-06 21:29:32,527 | INFO     | [monitor] control thread has ended
[2025-06-06 21:29:39] 2025-06-06 21:29:37,314 | INFO     | all workflow threads have been joined
[2025-06-06 21:29:39] 2025-06-06 21:29:37,315 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 21:29:39] 2025-06-06 21:29:37,315 | INFO     | traces error code: 0
[2025-06-06 21:29:39] 2025-06-06 21:29:37,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 21:29:39] 2025-06-06 21:29:37,863 [wrapper] ==== pilot stdout END ====
[2025-06-06 21:29:39] 2025-06-06 21:29:37,887 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 21:29:39] 2025-06-06 21:29:37,915 [wrapper] pilotpid: 1826659
[2025-06-06 21:29:39] 2025-06-06 21:29:37,939 [wrapper] Pilot exit status: 0
[2025-06-06 21:29:39] 2025-06-06 21:29:38,163 [wrapper] pandaids: 6678364630
[2025-06-06 21:29:39] 2025-06-06 21:29:38,303 [wrapper] cleanup supervisor_pilot 1892976 1826660
[2025-06-06 21:29:39] 2025-06-06 21:29:38,327 [wrapper] Test setup, not cleaning
[2025-06-06 21:29:39] 2025-06-06 21:29:38,351 [wrapper] apfmon messages muted
[2025-06-06 21:29:39] 2025-06-06 21:29:38,379 [wrapper] ==== wrapper stdout END ====
[2025-06-06 21:29:39] 2025-06-06 21:29:38,395 [wrapper] ==== wrapper stderr END ====
[2025-06-06 21:29:39]  *** Error codes and diagnostics ***
[2025-06-06 21:29:39]     "exeErrorCode": 0,
[2025-06-06 21:29:39]     "exeErrorDiag": "",
[2025-06-06 21:29:39]     "pilotErrorCode": 0,
[2025-06-06 21:29:39]     "pilotErrorDiag": "",
[2025-06-06 21:29:39]  *** Listing of results directory ***
[2025-06-06 21:29:39] total 382840
[2025-06-06 21:29:39] -rw-r--r-- 1 boinc boinc    495897 Jun  4 05:59 pilot3.tar.gz
[2025-06-06 21:29:39] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:27 queuedata.json
[2025-06-06 21:29:39] -rwx------ 1 boinc boinc     37140 Jun  4 06:27 runpilot2-wrapper.sh
[2025-06-06 21:29:39] -rw-rw-r-- 1 boinc boinc       100 Jun  6 17:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 21:29:39] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 17:02 run_atlas
[2025-06-06 21:29:39] -rw-rw-r-- 1 boinc boinc       105 Jun  6 17:02 job.xml
[2025-06-06 21:29:39] -rw-r--r-- 2 boinc boinc     15093 Jun  6 17:02 start_atlas.sh
[2025-06-06 21:29:39] drwxrwx--x 2 boinc boinc      4096 Jun  6 17:02 shared
[2025-06-06 21:29:39] -rw-r--r-- 2 boinc boinc    508880 Jun  6 17:02 input.tar.gz
[2025-06-06 21:29:39] -rw-rw-r-- 1 boinc boinc      9361 Jun  6 17:02 init_data.xml
[2025-06-06 21:29:39] -rw-r--r-- 2 boinc boinc 213750168 Jun  6 17:02 EVNT.45006593._002166.pool.root.1
[2025-06-06 21:29:39] -rw-rw-r-- 1 boinc boinc         0 Jun  6 17:02 boinc_lockfile
[2025-06-06 21:29:39] -rw-rw-r-- 1 boinc boinc      2525 Jun  6 17:02 pandaJob.out
[2025-06-06 21:29:39] -rw------- 1 boinc boinc    985748 Jun  6 17:03 agis_schedconf.cvmfs.json
[2025-06-06 21:29:39] drwx------ 4 boinc boinc      4096 Jun  6 17:04 pilot3
[2025-06-06 21:29:39] -rw------- 1 boinc boinc 170586026 Jun  6 21:27 HITS.45006595._054114.pool.root.1
[2025-06-06 21:29:39] -rw-rw-r-- 1 boinc boinc       530 Jun  6 21:27 boinc_task_state.xml
[2025-06-06 21:29:39] -rw------- 1 boinc boinc      1034 Jun  6 21:28 memory_monitor_summary.json
[2025-06-06 21:29:39] -rw------- 1 boinc boinc   1598969 Jun  6 21:28 agis_ddmendpoints.agis.ALL.json
[2025-06-06 21:29:39] -rw------- 1 boinc boinc    455894 Jun  6 21:28 log.45006595._054114.job.log.tgz.1
[2025-06-06 21:29:39] -rw------- 1 boinc boinc        95 Jun  6 21:28 pilot_heartbeat.json
[2025-06-06 21:29:39] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 21:29 boinc_mmap_file
[2025-06-06 21:29:39] -rw-rw-r-- 1 boinc boinc        28 Jun  6 21:29 wrapper_checkpoint.txt
[2025-06-06 21:29:39] -rw------- 1 boinc boinc      7668 Jun  6 21:29 heartbeat.json
[2025-06-06 21:29:39] -rw------- 1 boinc boinc      4500 Jun  6 21:29 pilotlog.txt
[2025-06-06 21:29:39] -rw------- 1 boinc boinc   1471592 Jun  6 21:29 log.45006595._054114.job.log.1
[2025-06-06 21:29:39] -rw------- 1 boinc boinc       357 Jun  6 21:29 output.list
[2025-06-06 21:29:39] -rw-rw-r-- 1 boinc boinc       620 Jun  6 21:29 runtime_log
[2025-06-06 21:29:39] -rw------- 1 boinc boinc   1945600 Jun  6 21:29 result.tar.gz
[2025-06-06 21:29:39] -rw------- 1 boinc boinc       653 Jun  6 21:29 xyCMDm1lwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuTnKDmHMcN4n.diag
[2025-06-06 21:29:39] -rw-rw-r-- 1 boinc boinc      8959 Jun  6 21:29 runtime_log.err
[2025-06-06 21:29:39] -rw-rw-r-- 1 boinc boinc     21046 Jun  6 21:29 stderr.txt
[2025-06-06 21:29:39] HITS file was successfully produced:
[2025-06-06 21:29:39] -rw------- 1 boinc boinc 170586026 Jun  6 21:27 shared/HITS.pool.root.1
[2025-06-06 21:29:39]  *** Contents of shared directory: ***
[2025-06-06 21:29:39] total 377756
[2025-06-06 21:29:39] -rw-r--r-- 2 boinc boinc     15093 Jun  6 17:02 start_atlas.sh
[2025-06-06 21:29:39] -rw-r--r-- 2 boinc boinc    508880 Jun  6 17:02 input.tar.gz
[2025-06-06 21:29:39] -rw-r--r-- 2 boinc boinc 213750168 Jun  6 17:02 ATLAS.root_0
[2025-06-06 21:29:39] -rw------- 1 boinc boinc 170586026 Jun  6 21:27 HITS.pool.root.1
[2025-06-06 21:29:39] -rw------- 1 boinc boinc   1945600 Jun  6 21:29 result.tar.gz
21:29:40 (1823074): run_atlas exited; CPU time 20778.585113
21:29:40 (1823074): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN