Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:22:26 (42506): wrapper (7.7.26015): starting
07:22:26 (42506): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:22:26] Arguments: --nthreads 8
[2025-06-04 07:22:26] Threads: 8
[2025-06-04 07:22:26] Checking for CVMFS
[2025-06-04 07:22:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:22:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:22:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:22:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:22:26] 2.11.2.0 72091 1058 121772 146779 2 65 18234340 18432000 13502 130560 0 18370199 99.885 3811135 75293 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 07:22:26] CVMFS is ok
[2025-06-04 07:22:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:22:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:22:26] Further information can be found at the LHC@home message board.
[2025-06-04 07:22:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:22:26] Checking for apptainer binary...
[2025-06-04 07:22:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:22:26] Running /usr/bin/apptainer --version
[2025-06-04 07:22:26] apptainer version 1.3.2-1.el7
[2025-06-04 07:22:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:22:27] c-212-4.aglt2.org
[2025-06-04 07:22:27] apptainer works
[2025-06-04 07:22:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:22:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:22:27] Starting ATLAS job with PandaID=6678365252
[2025-06-04 07:22:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:42:00]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:42:00]  mtime=0
[2025-06-04 08:42:00]  protocol_id=None
[2025-06-04 08:42:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:42:00]  replicas=None
[2025-06-04 08:42:00]  scope=mc23_13p6TeV
[2025-06-04 08:42:00]  status=None
[2025-06-04 08:42:00]  status_code=0
[2025-06-04 08:42:00]  storage_token=
[2025-06-04 08:42:00]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678365252/log.45006595._054283.job.log.tgz.1
[2025-06-04 08:42:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/45/log.45006595._054283.job.log.tgz.1
[2025-06-04 08:42:00]  workdir=None
[2025-06-04 08:42:00] ]
[2025-06-04 08:42:00] 2025-06-04 12:41:29,483 | INFO     | transferring file log.45006595._054283.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678365252/log.45006595._054283.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:42:00] 2025-06-04 12:41:29,483 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678365252/log.45006595._054283.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._054283.job
[2025-06-04 08:42:00] 2025-06-04 12:41:29,499 | INFO     | adding to output.list: log.45006595._054283.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/45/log.45006595._054283.job.log.tg
[2025-06-04 08:42:00] 2025-06-04 12:41:29,500 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:42:00] 2025-06-04 12:41:29,500 | INFO     | summary of transferred files:
[2025-06-04 08:42:00] 2025-06-04 12:41:29,500 | INFO     |  -- lfn=log.45006595._054283.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:42:00] 2025-06-04 12:41:29,500 | INFO     | stage-out finished correctly
[2025-06-04 08:42:00] 2025-06-04 12:41:29,677 | INFO     | PID=46138 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 08:42:00] 2025-06-04 12:41:29,677 | INFO     | .. there are 18 such processes running
[2025-06-04 08:42:00] 2025-06-04 12:41:30,854 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:42:00] 2025-06-04 12:41:33,382 | INFO     | job 6678365252 has state=finished
[2025-06-04 08:42:00] 2025-06-04 12:41:33,382 | INFO     | preparing for final server update for job 6678365252 in state='finished'
[2025-06-04 08:42:00] 2025-06-04 12:41:33,382 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:42:00] 2025-06-04 12:41:33,383 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:42:00] 2025-06-04 12:41:33,383 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:42:00] 2025-06-04 12:41:33,383 | INFO     | job 6678365252 has finished - writing final server update
[2025-06-04 08:42:00] 2025-06-04 12:41:33,383 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:42:00] 2025-06-04 12:41:33,387 | INFO     | executing command: lscpu
[2025-06-04 08:42:00] 2025-06-04 12:41:33,432 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:42:00] 2025-06-04 12:41:34,472 | WARNING  | process 54833 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:42:00] 2025-06-04 12:41:34,473 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678365252/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:42:00] 2025-06-04 12:41:34,771 | INFO     | number of running child processes to parent process 54833: 1
[2025-06-04 08:42:00] 2025-06-04 12:41:34,771 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:42:00] 2025-06-04 12:41:37,277 | INFO     | monitor loop #354: job 0:6678365252 is in state 'finished'
[2025-06-04 08:42:00] 2025-06-04 12:41:37,277 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:42:00] 2025-06-04 12:41:39,783 | INFO     | monitor loop #355: job 0:6678365252 is in state 'finished'
[2025-06-04 08:42:00] 2025-06-04 12:41:39,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:42:00] 2025-06-04 12:41:40,459 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:42:00] 2025-06-04 12:41:40,460 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678365252/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:42:00] 2025-06-04 12:41:40,460 | INFO     | extracted standard info from prmon json
[2025-06-04 08:42:00] 2025-06-04 12:41:40,460 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:42:00] 2025-06-04 12:41:40,460 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:42:00] 2025-06-04 12:41:40,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:42:00] 2025-06-04 12:41:40,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:42:00] 2025-06-04 12:41:40,462 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:42:00] 2025-06-04 12:41:40,462 | INFO     | sum of square deviations: 106336877.5
[2025-06-04 08:42:00] 2025-06-04 12:41:40,463 | INFO     | sum of deviations: -3877919084.0
[2025-06-04 08:42:00] 2025-06-04 12:41:40,463 | INFO     | mean x: 1749038606.5
[2025-06-04 08:42:00] 2025-06-04 12:41:40,463 | INFO     | mean y: 2546030.742857143
[2025-06-04 08:42:00] 2025-06-04 12:41:40,463 | INFO     | -- intersect: 63786910874.43612
[2025-06-04 08:42:00] 2025-06-04 12:41:40,463 | INFO     | intersect: 63786910874.43612
[2025-06-04 08:42:00] 2025-06-04 12:41:40,463 | INFO     | chi2: 0.004781764340609774
[2025-06-04 08:42:00] 2025-06-04 12:41:40,463 | INFO     | -- intersect: 63786910874.43612
[2025-06-04 08:42:00] 2025-06-04 12:41:40,463 | INFO     | current memory leak: -36.47 B/s (using 70 data points, chi2=0.00)
[2025-06-04 08:42:00] 2025-06-04 12:41:40,464 | INFO     | ..............................
[2025-06-04 08:42:00] 2025-06-04 12:41:40,464 | INFO     | . Timing measurements:
[2025-06-04 08:42:00] 2025-06-04 12:41:40,464 | INFO     | . get job = 0 s
[2025-06-04 08:42:00] 2025-06-04 12:41:40,464 | INFO     | . initial setup = 2 s
[2025-06-04 08:42:00] 2025-06-04 12:41:40,464 | INFO     | . payload setup = 9 s
[2025-06-04 08:42:00] 2025-06-04 12:41:40,464 | INFO     | . stage-in = 0 s
[2025-06-04 08:42:00] 2025-06-04 12:41:40,464 | INFO     | . payload execution = 4696 s
[2025-06-04 08:42:00] 2025-06-04 12:41:40,464 | INFO     | . stage-out = 0 s
[2025-06-04 08:42:00] 2025-06-04 12:41:40,464 | INFO     | . log creation = 0 s
[2025-06-04 08:42:00] 2025-06-04 12:41:40,464 | INFO     | ..............................
[2025-06-04 08:42:00] 2025-06-04 12:41:40,539 | INFO     | 
[2025-06-04 08:42:00] 2025-06-04 12:41:40,539 | INFO     | job summary report
[2025-06-04 08:42:00] 2025-06-04 12:41:40,539 | INFO     | --------------------------------------------------
[2025-06-04 08:42:00] 2025-06-04 12:41:40,539 | INFO     | PanDA job id: 6678365252
[2025-06-04 08:42:00] 2025-06-04 12:41:40,539 | INFO     | task id: 45006595
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | errors: (none)
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | pilot state: finished 
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | transexitcode: 0
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | exeerrorcode: 0
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | exeerrordiag: 
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | exitcode: 0
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | exitmsg: OK
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | cpuconsumptiontime: 30232 s
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | nevents: 400
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | neventsw: 0
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | pid: 54833
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | pgrp: 54833
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | corecount: 8
[2025-06-04 08:42:00] 2025-06-04 12:41:40,540 | INFO     | event service: False
[2025-06-04 08:42:00] 2025-06-04 12:41:40,541 | INFO     | sizes: {0: 2404356, 1: 2405212, 6: 2405418, 12: 2405446, 4709: 2431486, 4711: 2440427, 4712: 2440611, 4722: 2440781}
[2025-06-04 08:42:00] 2025-06-04 12:41:40,541 | INFO     | --------------------------------------------------
[2025-06-04 08:42:00] 2025-06-04 12:41:40,541 | INFO     | 
[2025-06-04 08:42:00] 2025-06-04 12:41:40,541 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 08:42:00] 2025-06-04 12:41:40,570 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,572 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,572 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,572 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,572 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:42:00] 2025-06-04 12:41:40,572 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,572 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:42:00] 2025-06-04 12:41:40,572 | INFO     | job 6678365252 has completed (purged errors)
[2025-06-04 08:42:00] 2025-06-04 12:41:40,572 | INFO     | overall cleanup function is called
[2025-06-04 08:42:00] 2025-06-04 12:41:41,580 | INFO     | --- collectZombieJob: --- 10, [54833]
[2025-06-04 08:42:00] 2025-06-04 12:41:41,581 | INFO     | zombie collector waiting for pid 54833
[2025-06-04 08:42:00] 2025-06-04 12:41:41,581 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:42:00] 2025-06-04 12:41:41,581 | INFO     | collected zombie processes
[2025-06-04 08:42:00] 2025-06-04 12:41:41,581 | INFO     | will attempt to kill all subprocesses of pid=54833
[2025-06-04 08:42:00] 2025-06-04 12:41:41,845 | INFO     | process IDs to be killed: [54833] (in reverse order)
[2025-06-04 08:42:00] 2025-06-04 12:41:41,931 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:42:00] 2025-06-04 12:41:41,931 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:42:00] 2025-06-04 12:41:41,938 | INFO     | did not find any defunct processes belonging to 54833
[2025-06-04 08:42:00] 2025-06-04 12:41:41,945 | INFO     | did not find any defunct processes belonging to 54833
[2025-06-04 08:42:00] 2025-06-04 12:41:41,945 | INFO     | ready for new job
[2025-06-04 08:42:00] 2025-06-04 12:41:41,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:42:00] 2025-06-04 12:41:41,946 | INFO     | **************************************
[2025-06-04 08:42:00] 2025-06-04 12:41:41,946 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:42:00] 2025-06-04 12:41:41,946 | INFO     | **************************************
[2025-06-04 08:42:00] 2025-06-04 12:41:41,946 | INFO     | 
[2025-06-04 08:42:00] 2025-06-04 12:41:41,949 | INFO     | architecture information:
[2025-06-04 08:42:00] 2025-06-04 12:41:41,950 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:42:00] 2025-06-04 12:41:41,963 | INFO     | cat /etc/os-release:
[2025-06-04 08:42:00] NAME="CentOS Linux"
[2025-06-04 08:42:00] VERSION="7 (Core)"
[2025-06-04 08:42:00] ID="centos"
[2025-06-04 08:42:00] ID_LIKE="rhel fedora"
[2025-06-04 08:42:00] VERSION_ID="7"
[2025-06-04 08:42:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:42:00] ANSI_COLOR="0;31"
[2025-06-04 08:42:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:42:00] HOME_URL="https://www.centos.org/"
[2025-06-04 08:42:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:42:00] 
[2025-06-04 08:42:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:42:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:42:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:42:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:42:00] 
[2025-06-04 08:42:00] 2025-06-04 12:41:41,964 | INFO     | **************************************
[2025-06-04 08:42:00] 2025-06-04 12:41:42,467 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 08:42:00] 2025-06-04 12:41:42,483 | INFO     | sufficient remaining disk space (103698923520 B)
[2025-06-04 08:42:00] 2025-06-04 12:41:42,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:42:00] 2025-06-04 12:41:42,483 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:42:00] 2025-06-04 12:41:42,483 | INFO     | update_server=False
[2025-06-04 08:42:00] 2025-06-04 12:41:42,483 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:42:00] 2025-06-04 12:41:42,484 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:42:00] 2025-06-04 12:41:42,484 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:42:00] 2025-06-04 12:41:42,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:42:00] 2025-06-04 12:41:42,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:42:00] 2025-06-04 12:41:42,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:42:00] 2025-06-04 12:41:42,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:42:00] 2025-06-04 12:41:42,660 | INFO     | all data control threads have been joined
[2025-06-04 08:42:00] 2025-06-04 12:41:42,806 | INFO     | all payload control threads have been joined
[2025-06-04 08:42:00] 2025-06-04 12:41:43,145 | INFO     | all job control threads have been joined
[2025-06-04 08:42:00] 2025-06-04 12:41:43,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:42:00] 2025-06-04 12:41:43,295 | INFO     | aborting loop
[2025-06-04 08:42:00] 2025-06-04 12:41:43,490 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:43,490 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:43,667 | INFO     | [data] control thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:43,755 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:43,777 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:43,812 | INFO     | [payload] control thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:43,992 | INFO     | [job] validate thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:44,151 | INFO     | [job] control thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:44,226 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:44,301 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:44,328 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:44,596 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:44,607 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:44,984 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:45,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:42:00] 2025-06-04 12:41:49,959 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:53,132 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:42:00] 2025-06-04 12:41:54,137 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:42:00] 2025-06-04 12:41:55,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140153551128384)>', '<ExcThread(monitor, started 140153037256448)>']
[2025-06-04 08:42:00] 2025-06-04 12:41:55,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:42:00] 2025-06-04 12:41:55,546 | INFO     | [monitor] control thread has ended
[2025-06-04 08:42:00] 2025-06-04 12:42:00,400 | INFO     | all workflow threads have been joined
[2025-06-04 08:42:00] 2025-06-04 12:42:00,401 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:42:00] 2025-06-04 12:42:00,401 | INFO     | traces error code: 0
[2025-06-04 08:42:00] 2025-06-04 12:42:00,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:42:00] 2025-06-04 12:42:00,502 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:42:00] 2025-06-04 12:42:00,504 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:42:00] 2025-06-04 12:42:00,506 [wrapper] pilotpid: 46138
[2025-06-04 08:42:00] 2025-06-04 12:42:00,508 [wrapper] Pilot exit status: 0
[2025-06-04 08:42:00] 2025-06-04 12:42:00,519 [wrapper] pandaids: 6678365252
[2025-06-04 08:42:00] 2025-06-04 12:42:00,583 [wrapper] cleanup supervisor_pilot 33575 46139
[2025-06-04 08:42:00] 2025-06-04 12:42:00,585 [wrapper] Test setup, not cleaning
[2025-06-04 08:42:00] 2025-06-04 12:42:00,589 [wrapper] apfmon messages muted
[2025-06-04 08:42:00] 2025-06-04 12:42:00,591 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:42:00] 2025-06-04 12:42:00,593 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:42:00]  *** Error codes and diagnostics ***
[2025-06-04 08:42:00]     "exeErrorCode": 0,
[2025-06-04 08:42:00]     "exeErrorDiag": "",
[2025-06-04 08:42:00]     "pilotErrorCode": 0,
[2025-06-04 08:42:00]     "pilotErrorDiag": "",
[2025-06-04 08:42:00]  *** Listing of results directory ***
[2025-06-04 08:42:00] total 400344
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:42:00] -rwx------ 1 boincer umatlas     37140 Jun  4 02:31 runpilot2-wrapper.sh
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:31 queuedata.json
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:42:00] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:22 run_atlas
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:22 job.xml
[2025-06-04 08:42:00] -rw-r--r-- 2 boincer umatlas 217515850 Jun  4 07:22 EVNT.45006593._002172.pool.root.1
[2025-06-04 08:42:00] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:22 start_atlas.sh
[2025-06-04 08:42:00] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:22 shared
[2025-06-04 08:42:00] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 07:22 input.tar.gz
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:22 boinc_lockfile
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 07:22 pandaJob.out
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas    986812 Jun  4 07:22 agis_schedconf.cvmfs.json
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas   1603667 Jun  4 07:22 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:42:00] drwx------ 4 boincer umatlas      4096 Jun  4 07:22 pilot3
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas      6386 Jun  4 08:39 init_data.xml
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas 187016592 Jun  4 08:41 HITS.45006595._054283.pool.root.1
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas        95 Jun  4 08:41 pilot_heartbeat.json
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas       529 Jun  4 08:41 boinc_task_state.xml
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas      1077 Jun  4 08:41 memory_monitor_summary.json
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas    323699 Jun  4 08:41 log.45006595._054283.job.log.tgz.1
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas      7744 Jun  4 08:41 heartbeat.json
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:41 wrapper_checkpoint.txt
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:41 boinc_mmap_file
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas      4549 Jun  4 08:42 pilotlog.txt
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas    466400 Jun  4 08:42 log.45006595._054283.job.log.1
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas       357 Jun  4 08:42 output.list
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:42 runtime_log
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas    808960 Jun  4 08:42 result.tar.gz
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 08:42 runtime_log.err
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas       658 Jun  4 08:42 17mLDm6pwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMsaKDmo8GWQo.diag
[2025-06-04 08:42:00] -rw-r--r-- 1 boincer umatlas     21705 Jun  4 08:42 stderr.txt
[2025-06-04 08:42:00] HITS file was successfully produced:
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas 187016592 Jun  4 08:41 shared/HITS.pool.root.1
[2025-06-04 08:42:00]  *** Contents of shared directory: ***
[2025-06-04 08:42:00] total 396372
[2025-06-04 08:42:00] -rw-r--r-- 2 boincer umatlas 217515850 Jun  4 07:22 ATLAS.root_0
[2025-06-04 08:42:00] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:22 start_atlas.sh
[2025-06-04 08:42:00] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 07:22 input.tar.gz
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas 187016592 Jun  4 08:41 HITS.pool.root.1
[2025-06-04 08:42:00] -rw------- 1 boincer umatlas    808960 Jun  4 08:42 result.tar.gz
08:42:02 (42506): run_atlas exited; CPU time 30070.250307
08:42:02 (42506): called boinc_finish(0)

</stderr_txt>
]]>

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