Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:16:44 (25447): wrapper (7.7.26015): starting
22:16:44 (25447): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:16:44] Arguments: --nthreads 8
[2025-06-04 22:16:44] Threads: 8
[2025-06-04 22:16:44] Checking for CVMFS
[2025-06-04 22:16:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:16:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:16:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:16:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:16:46] 2.11.2.0 13438 33686 100560 146792 1 60 22922101 25165825 3907 130560 0 17355285 99.798 19563251 2096 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 22:16:46] CVMFS is ok
[2025-06-04 22:16:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:16:46] Checking for apptainer binary...
[2025-06-04 22:16:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:16:46] Running /usr/bin/apptainer --version
[2025-06-04 22:16:46] apptainer version 1.3.2-1.el7
[2025-06-04 22:16:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:16:55] cg-vwn353.simple-grid.lan
[2025-06-04 22:16:55] apptainer works
[2025-06-04 22:16:55] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:16:55] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:16:55] Starting ATLAS job with PandaID=6678365346
[2025-06-04 22:16:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:22:05]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:22:05] 2025-06-05 00:18:30,419 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6678365346/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:22:05] 2025-06-05 00:18:30,420 | INFO     | extracted standard info from prmon json
[2025-06-05 02:22:05] 2025-06-05 00:18:30,420 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:22:05] 2025-06-05 00:18:30,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:22:05] 2025-06-05 00:18:30,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:22:05] 2025-06-05 00:18:30,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:22:05] 2025-06-05 00:18:30,425 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:22:05] 2025-06-05 00:18:30,433 | INFO     | sum of square deviations: 3531973200.0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,435 | INFO     | sum of deviations: 69563693010.0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,435 | INFO     | mean x: 1749075729.0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,435 | INFO     | mean y: 2435186.2044444443
[2025-06-05 02:22:05] 2025-06-05 00:18:30,435 | INFO     | -- intersect: -34446344624.29863
[2025-06-05 02:22:05] 2025-06-05 00:18:30,435 | INFO     | intersect: -34446344624.29863
[2025-06-05 02:22:05] 2025-06-05 00:18:30,436 | INFO     | chi2: 7.916679054993847
[2025-06-05 02:22:05] 2025-06-05 00:18:30,436 | INFO     | sum of square deviations: 3301699115.0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,438 | INFO     | sum of deviations: 82845431477.49998
[2025-06-05 02:22:05] 2025-06-05 00:18:30,438 | INFO     | mean x: 1749075576.5
[2025-06-05 02:22:05] 2025-06-05 00:18:30,438 | INFO     | mean y: 2443804.8136363635
[2025-06-05 02:22:05] 2025-06-05 00:18:30,439 | INFO     | -- intersect: -43884935321.76663
[2025-06-05 02:22:05] 2025-06-05 00:18:30,439 | INFO     | intersect: -43884935321.76663
[2025-06-05 02:22:05] 2025-06-05 00:18:30,439 | INFO     | chi2: 7.2242607026907315
[2025-06-05 02:22:05] 2025-06-05 00:18:30,439 | INFO     | current chi2=7.2242607026907315 (change=8.746323395115247 %)
[2025-06-05 02:22:05] 2025-06-05 00:18:30,439 | INFO     | right removable region: 219
[2025-06-05 02:22:05] 2025-06-05 00:18:30,440 | INFO     | sum of square deviations: 3301699115.0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,442 | INFO     | sum of deviations: -8071359783.5
[2025-06-05 02:22:05] 2025-06-05 00:18:30,442 | INFO     | mean x: 1749075881.5
[2025-06-05 02:22:05] 2025-06-05 00:18:30,442 | INFO     | mean y: 2486556.977272727
[2025-06-05 02:22:05] 2025-06-05 00:18:30,442 | INFO     | -- intersect: 4278291297.6611953
[2025-06-05 02:22:05] 2025-06-05 00:18:30,442 | INFO     | intersect: 4278291297.6611953
[2025-06-05 02:22:05] 2025-06-05 00:18:30,443 | INFO     | chi2: 2.943325810704268
[2025-06-05 02:22:05] 2025-06-05 00:18:30,443 | INFO     | current chi2=2.943325810704268 (change=62.82120583317552 %)
[2025-06-05 02:22:05] 2025-06-05 00:18:30,443 | INFO     | sum of square deviations: 3081657780.0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,445 | INFO     | sum of deviations: -54809135681.0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,445 | INFO     | mean x: 1749076034.0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,445 | INFO     | mean y: 2518801.6372093023
[2025-06-05 02:22:05] 2025-06-05 00:18:30,445 | INFO     | -- intersect: 31110887253.857548
[2025-06-05 02:22:05] 2025-06-05 00:18:30,445 | INFO     | intersect: 31110887253.857548
[2025-06-05 02:22:05] 2025-06-05 00:18:30,446 | INFO     | chi2: 1.0233835005629766
[2025-06-05 02:22:05] 2025-06-05 00:18:30,446 | INFO     | current chi2=1.0233835005629766 (change=65.23036977961657 %)
[2025-06-05 02:22:05] 2025-06-05 00:18:30,446 | INFO     | sum of square deviations: 2871616632.5
[2025-06-05 02:22:05] 2025-06-05 00:18:30,454 | INFO     | sum of deviations: -56188805041.500015
[2025-06-05 02:22:05] 2025-06-05 00:18:30,455 | INFO     | mean x: 1749076186.5
[2025-06-05 02:22:05] 2025-06-05 00:18:30,455 | INFO     | mean y: 2519745.6523809526
[2025-06-05 02:22:05] 2025-06-05 00:18:30,455 | INFO     | -- intersect: 34226621853.74561
[2025-06-05 02:22:05] 2025-06-05 00:18:30,462 | INFO     | intersect: 34226621853.74561
[2025-06-05 02:22:05] 2025-06-05 00:18:30,463 | INFO     | chi2: 0.9815062472695113
[2025-06-05 02:22:05] 2025-06-05 00:18:30,463 | INFO     | current chi2=0.9815062472695113 (change=4.092039130045387 %)
[2025-06-05 02:22:05] 2025-06-05 00:18:30,463 | INFO     | left removable region: 30
[2025-06-05 02:22:05] 2025-06-05 00:18:30,463 | INFO     | sum of square deviations: 2093397390.0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,465 | INFO     | sum of deviations: -21128781487.0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,465 | INFO     | mean x: 1749076461.0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,465 | INFO     | mean y: 2514384.613756614
[2025-06-05 02:22:05] 2025-06-05 00:18:30,465 | INFO     | -- intersect: 17656044729.621155
[2025-06-05 02:22:05] 2025-06-05 00:18:30,465 | INFO     | intersect: 17656044729.621155
[2025-06-05 02:22:05] 2025-06-05 00:18:30,466 | INFO     | chi2: 0.14346484150635475
[2025-06-05 02:22:05] 2025-06-05 00:18:30,466 | INFO     | -- intersect: 17656044729.621155
[2025-06-05 02:22:05] 2025-06-05 00:18:30,466 | INFO     | current memory leak: -10.09 B/s (using 189 data points, chi2=0.14)
[2025-06-05 02:22:05] 2025-06-05 00:18:30,467 | INFO     | ..............................
[2025-06-05 02:22:05] 2025-06-05 00:18:30,467 | INFO     | . Timing measurements:
[2025-06-05 02:22:05] 2025-06-05 00:18:30,467 | INFO     | . get job = 0 s
[2025-06-05 02:22:05] 2025-06-05 00:18:30,467 | INFO     | . initial setup = 9 s
[2025-06-05 02:22:05] 2025-06-05 00:18:30,467 | INFO     | . payload setup = 168 s
[2025-06-05 02:22:05] 2025-06-05 00:18:30,467 | INFO     | . stage-in = 0 s
[2025-06-05 02:22:05] 2025-06-05 00:18:30,468 | INFO     | . payload execution = 13864 s
[2025-06-05 02:22:05] 2025-06-05 00:18:30,468 | INFO     | . stage-out = 4 s
[2025-06-05 02:22:05] 2025-06-05 00:18:30,468 | INFO     | . log creation = 1 s
[2025-06-05 02:22:05] 2025-06-05 00:18:30,468 | INFO     | ..............................
[2025-06-05 02:22:05] 2025-06-05 00:18:30,644 | INFO     | 
[2025-06-05 02:22:05] 2025-06-05 00:18:30,644 | INFO     | job summary report
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | --------------------------------------------------
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | PanDA job id: 6678365346
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | task id: 45006595
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | errors: (none)
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | pilot state: finished 
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | transexitcode: 0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | exeerrorcode: 0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | exeerrordiag: 
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | exitcode: 0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | exitmsg: OK
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | cpuconsumptiontime: 51459 s
[2025-06-05 02:22:05] 2025-06-05 00:18:30,645 | INFO     | nevents: 400
[2025-06-05 02:22:05] 2025-06-05 00:18:30,646 | INFO     | neventsw: 0
[2025-06-05 02:22:05] 2025-06-05 00:18:30,646 | INFO     | pid: 6073
[2025-06-05 02:22:05] 2025-06-05 00:18:30,646 | INFO     | pgrp: 6073
[2025-06-05 02:22:05] 2025-06-05 00:18:30,654 | INFO     | corecount: 8
[2025-06-05 02:22:05] 2025-06-05 00:18:30,654 | INFO     | event service: False
[2025-06-05 02:22:05] 2025-06-05 00:18:30,654 | INFO     | sizes: {0: 2397115, 1: 2397370, 2: 2397370, 12: 2397398, 23: 2397426, 34: 2397454, 45: 2397610, 55: 2397638, 66: 2397666, 77: 2397694, 78: 2397956, 88: 2398292, 14
[2025-06-05 02:22:05] 2025-06-05 00:18:30,655 | INFO     | --------------------------------------------------
[2025-06-05 02:22:05] 2025-06-05 00:18:30,655 | INFO     | 
[2025-06-05 02:22:05] 2025-06-05 00:18:30,655 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-05 02:22:05] 2025-06-05 00:18:30,960 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,960 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,960 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,960 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,961 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,961 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,961 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,962 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,962 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:22:05] 2025-06-05 00:18:30,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,962 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:22:05] 2025-06-05 00:18:30,962 | INFO     | job 6678365346 has completed (purged errors)
[2025-06-05 02:22:05] 2025-06-05 00:18:30,962 | INFO     | overall cleanup function is called
[2025-06-05 02:22:05] 2025-06-05 00:18:31,972 | INFO     | --- collectZombieJob: --- 10, [6073]
[2025-06-05 02:22:05] 2025-06-05 00:18:31,972 | INFO     | zombie collector waiting for pid 6073
[2025-06-05 02:22:05] 2025-06-05 00:18:31,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:22:05] 2025-06-05 00:18:31,973 | INFO     | collected zombie processes
[2025-06-05 02:22:05] 2025-06-05 00:18:31,973 | INFO     | will attempt to kill all subprocesses of pid=6073
[2025-06-05 02:22:05] 2025-06-05 00:18:32,104 | INFO     | process IDs to be killed: [6073] (in reverse order)
[2025-06-05 02:22:05] 2025-06-05 00:18:32,722 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:22:05] 2025-06-05 00:18:32,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:22:05] 2025-06-05 00:18:32,726 | INFO     | did not find any defunct processes belonging to 6073
[2025-06-05 02:22:05] 2025-06-05 00:18:32,729 | INFO     | did not find any defunct processes belonging to 6073
[2025-06-05 02:22:05] 2025-06-05 00:18:32,729 | INFO     | ready for new job
[2025-06-05 02:22:05] 2025-06-05 00:18:32,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:22:05] 2025-06-05 00:18:32,735 | INFO     | **************************************
[2025-06-05 02:22:05] 2025-06-05 00:18:32,735 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:22:05] 2025-06-05 00:18:32,735 | INFO     | **************************************
[2025-06-05 02:22:05] 2025-06-05 00:18:32,735 | INFO     | 
[2025-06-05 02:22:05] 2025-06-05 00:18:32,736 | INFO     | pilot is running in a VM
[2025-06-05 02:22:05] 2025-06-05 00:18:32,736 | INFO     | architecture information:
[2025-06-05 02:22:05] 2025-06-05 00:18:32,745 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:22:05] 2025-06-05 00:18:32,871 | INFO     | cat /etc/os-release:
[2025-06-05 02:22:05] NAME="CentOS Linux"
[2025-06-05 02:22:05] VERSION="7 (Core)"
[2025-06-05 02:22:05] ID="centos"
[2025-06-05 02:22:05] ID_LIKE="rhel fedora"
[2025-06-05 02:22:05] VERSION_ID="7"
[2025-06-05 02:22:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:22:05] ANSI_COLOR="0;31"
[2025-06-05 02:22:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:22:05] HOME_URL="https://www.centos.org/"
[2025-06-05 02:22:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:22:05] 
[2025-06-05 02:22:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:22:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:22:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:22:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:22:05] 
[2025-06-05 02:22:05] 2025-06-05 00:18:32,872 | INFO     | **************************************
[2025-06-05 02:22:05] 2025-06-05 00:18:33,377 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-05 02:22:05] 2025-06-05 00:18:33,563 | INFO     | sufficient remaining disk space (497171824640 B)
[2025-06-05 02:22:05] 2025-06-05 00:18:33,563 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:22:05] 2025-06-05 00:18:33,563 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:22:05] 2025-06-05 00:18:33,563 | INFO     | update_server=False
[2025-06-05 02:22:05] 2025-06-05 00:18:33,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:22:05] 2025-06-05 00:18:33,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:22:05] 2025-06-05 00:18:33,623 | INFO     | all job control threads have been joined
[2025-06-05 02:22:05] 2025-06-05 00:18:33,698 | INFO     | all data control threads have been joined
[2025-06-05 02:22:05] 2025-06-05 00:18:34,022 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:22:05] 2025-06-05 00:18:34,023 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:22:05] 2025-06-05 00:18:34,023 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:22:05] 2025-06-05 00:18:34,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:22:05] 2025-06-05 00:18:34,430 | INFO     | aborting loop
[2025-06-05 02:22:05] 2025-06-05 00:18:34,569 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:34,597 | INFO     | all payload control threads have been joined
[2025-06-05 02:22:05] 2025-06-05 00:18:34,629 | INFO     | [job] control thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:34,664 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:34,704 | INFO     | [data] control thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:35,204 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:35,378 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:35,436 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:35,534 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:35,570 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:35,585 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:35,603 | INFO     | [payload] control thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:35,655 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:22:05] 2025-06-05 00:18:35,806 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:35,878 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:35,919 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:22:05] 2025-06-05 00:18:36,069 | INFO     | [job] validate thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:36,661 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:39,928 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:22:05] 2025-06-05 00:18:41,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139848390846272)>', '<ExcThread(monitor, started 139847817750272)>']
[2025-06-05 02:22:05] 2025-06-05 00:18:42,067 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:22:05] 2025-06-05 00:18:42,067 | INFO     | [monitor] control thread has ended
[2025-06-05 02:22:05] 2025-06-05 00:18:46,911 | INFO     | all workflow threads have been joined
[2025-06-05 02:22:05] 2025-06-05 00:18:46,911 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:22:05] 2025-06-05 00:18:46,912 | INFO     | traces error code: 0
[2025-06-05 02:22:05] 2025-06-05 00:18:46,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:22:05] 2025-06-05 00:18:47,379 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:22:05] 2025-06-05 00:18:47,424 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:22:05] 2025-06-05 00:18:47,474 [wrapper] pilotpid: 29839
[2025-06-05 02:22:05] 2025-06-05 00:18:47,526 [wrapper] Pilot exit status: 0
[2025-06-05 02:22:05] 2025-06-05 00:18:48,024 [wrapper] pandaids: 6678365346
[2025-06-05 02:22:05] 2025-06-05 00:18:49,096 [wrapper] cleanup supervisor_pilot 17179 29840
[2025-06-05 02:22:05] 2025-06-05 00:18:49,190 [wrapper] Test setup, not cleaning
[2025-06-05 02:22:05] 2025-06-05 00:18:49,253 [wrapper] apfmon messages muted
[2025-06-05 02:22:05] 2025-06-05 00:18:49,347 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:22:05] 2025-06-05 00:18:49,429 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:22:05]  *** Error codes and diagnostics ***
[2025-06-05 02:22:05]     "exeErrorCode": 0,
[2025-06-05 02:22:05]     "exeErrorDiag": "",
[2025-06-05 02:22:05]     "pilotErrorCode": 0,
[2025-06-05 02:22:05]     "pilotErrorDiag": "",
[2025-06-05 02:22:05]  *** Listing of results directory ***
[2025-06-05 02:22:05] total 389368
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc      5111 Jun  4 08:31 queuedata.json
[2025-06-05 02:22:05] -rwx------. 1 boinc boinc     37140 Jun  4 08:32 runpilot2-wrapper.sh
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc       100 Jun  4 22:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:22:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 22:16 run_atlas
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc       105 Jun  4 22:16 job.xml
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc      6393 Jun  4 22:16 init_data.xml
[2025-06-05 02:22:05] -rw-r--r--. 2 boinc boinc 215037831 Jun  4 22:16 EVNT.45006593._002176.pool.root.1
[2025-06-05 02:22:05] -rw-r--r--. 2 boinc boinc     15093 Jun  4 22:16 start_atlas.sh
[2025-06-05 02:22:05] drwxrwx--x. 2 boinc boinc        68 Jun  4 22:16 shared
[2025-06-05 02:22:05] -rw-r--r--. 2 boinc boinc    508884 Jun  4 22:16 input.tar.gz
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc         0 Jun  4 22:16 boinc_lockfile
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc      2524 Jun  4 22:16 pandaJob.out
[2025-06-05 02:22:05] -rw-------. 1 boinc boinc    987032 Jun  4 22:19 agis_schedconf.cvmfs.json
[2025-06-05 02:22:05] drwx------. 4 boinc boinc      4096 Jun  4 22:19 pilot3
[2025-06-05 02:22:05] -rw-------. 1 boinc boinc 176640311 Jun  5 02:15 HITS.45006595._054377.pool.root.1
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc       531 Jun  5 02:15 boinc_task_state.xml
[2025-06-05 02:22:05] -rw-------. 1 boinc boinc      1014 Jun  5 02:16 memory_monitor_summary.json
[2025-06-05 02:22:05] -rw-------. 1 boinc boinc   1598969 Jun  5 02:16 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:22:05] -rw-------. 1 boinc boinc    391212 Jun  5 02:16 log.45006595._054377.job.log.tgz.1
[2025-06-05 02:22:05] -rw-------. 1 boinc boinc      7699 Jun  5 02:18 heartbeat.json
[2025-06-05 02:22:05] -rw-------. 1 boinc boinc        95 Jun  5 02:18 pilot_heartbeat.json
[2025-06-05 02:22:05] -rw-------. 1 boinc boinc      4417 Jun  5 02:18 pilotlog.txt
[2025-06-05 02:22:05] -rw-------. 1 boinc boinc   1213930 Jun  5 02:18 log.45006595._054377.job.log.1
[2025-06-05 02:22:05] -rw-------. 1 boinc boinc       357 Jun  5 02:18 output.list
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc       620 Jun  5 02:18 runtime_log
[2025-06-05 02:22:05] -rw-------. 1 boinc boinc   1628160 Jun  5 02:18 result.tar.gz
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc      8673 Jun  5 02:18 runtime_log.err
[2025-06-05 02:22:05] -rw-------. 1 boinc boinc       657 Jun  5 02:18 dEvMDm4qwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLXnKDmTCsJIn.diag
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc      8192 Jun  5 02:22 boinc_mmap_file
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc        28 Jun  5 02:22 wrapper_checkpoint.txt
[2025-06-05 02:22:05] -rw-r--r--. 1 boinc boinc     20519 Jun  5 02:22 stderr.txt
[2025-06-05 02:22:06] HITS file was successfully produced:
[2025-06-05 02:22:06] -rw-------. 1 boinc boinc 176640311 Jun  5 02:15 shared/HITS.pool.root.1
[2025-06-05 02:22:06]  *** Contents of shared directory: ***
[2025-06-05 02:22:06] total 384612
[2025-06-05 02:22:06] -rw-r--r--. 2 boinc boinc 215037831 Jun  4 22:16 ATLAS.root_0
[2025-06-05 02:22:06] -rw-r--r--. 2 boinc boinc     15093 Jun  4 22:16 start_atlas.sh
[2025-06-05 02:22:06] -rw-r--r--. 2 boinc boinc    508884 Jun  4 22:16 input.tar.gz
[2025-06-05 02:22:06] -rw-------. 1 boinc boinc 176640311 Jun  5 02:15 HITS.pool.root.1
[2025-06-05 02:22:06] -rw-------. 1 boinc boinc   1628160 Jun  5 02:18 result.tar.gz
02:22:07 (25447): run_atlas exited; CPU time 51662.685421
02:22:07 (25447): called boinc_finish(0)

</stderr_txt>
]]>

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