Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-05 04:47:47 (42129): Detected: vboxwrapper 26206
2025-06-05 04:47:47 (42129): Detected: BOINC client v7.16.6
2025-06-05 04:47:49 (42129): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-06-05 04:47:49 (42129): Successfully copied 'init_data.xml' to the shared directory.
2025-06-05 04:47:49 (42129): Create VM. (boinc_e6f66f1878b01e40, slot#0)
2025-06-05 04:47:49 (42129): Setting Memory Size for VM. (4400MB)
2025-06-05 04:47:49 (42129): Setting CPU Count for VM. (4)
2025-06-05 04:47:50 (42129): Setting Chipset Options for VM.
2025-06-05 04:47:50 (42129): Setting Graphics Controller Options for VM.
2025-06-05 04:47:50 (42129): Setting Boot Options for VM.
2025-06-05 04:47:50 (42129): Setting Network Configuration for NAT.
2025-06-05 04:47:50 (42129): Enabling VM Network Access.
2025-06-05 04:47:50 (42129): Disabling USB Support for VM.
2025-06-05 04:47:50 (42129): Disabling COM Port Support for VM.
2025-06-05 04:47:50 (42129): Disabling LPT Port Support for VM.
2025-06-05 04:47:50 (42129): Disabling Audio Support for VM.
2025-06-05 04:47:50 (42129): Disabling Clipboard Support for VM.
2025-06-05 04:47:50 (42129): Disabling Drag and Drop Support for VM.
2025-06-05 04:47:50 (42129): Adding storage controller(s) to VM.
2025-06-05 04:47:50 (42129): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-05 04:47:50 (42129): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-05 04:47:50 (42129): forwarding host port 46603 to guest port 80
2025-06-05 04:47:50 (42129): Enabling remote desktop for VM.
2025-06-05 04:47:50 (42129): Required extension pack not installed, remote desktop not enabled.
2025-06-05 04:47:50 (42129): Enabling shared directory for VM.
2025-06-05 04:47:51 (42129): Starting VM using VBoxManage interface. (boinc_e6f66f1878b01e40, slot#0)
2025-06-05 04:47:52 (42129): Successfully started VM. (PID = '42550')
2025-06-05 04:47:52 (42129): Reporting VM Process ID to BOINC.
2025-06-05 04:47:52 (42129): Guest Log: BIOS: VirtualBox 6.1.50
2025-06-05 04:47:52 (42129): Guest Log: CPUID EDX: 0x178bfbff
2025-06-05 04:47:52 (42129): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-05 04:47:52 (42129): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-05 04:47:52 (42129): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-05 04:47:52 (42129): Detected: Web Application Enabled (http://localhost:46603)
2025-06-05 04:47:52 (42129): Preference change detected
2025-06-05 04:47:52 (42129): Setting CPU throttle for VM. (100%)
2025-06-05 04:47:52 (42129): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-05 04:47:54 (42129): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-05 04:47:54 (42129): Guest Log: BIOS: Booting from Hard Disk...
2025-06-05 04:47:57 (42129): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-05 04:47:57 (42129): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-05 04:47:57 (42129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-05 04:48:05 (42129): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-05 04:48:05 (42129): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-05 04:48:13 (42129): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-05 04:48:13 (42129): Guest Log: 00:00:00.000224 main     Log opened 2025-06-05T03:48:11.405358000Z
2025-06-05 04:48:13 (42129): Guest Log: 00:00:00.000345 main     OS Product: Linux
2025-06-05 04:48:13 (42129): Guest Log: 00:00:00.000384 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-05 04:48:13 (42129): Guest Log: 00:00:00.000412 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-05 04:48:13 (42129): Guest Log: 00:00:00.000437 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-05 04:48:13 (42129): Guest Log: 00:00:00.000438 main     Process ID: 1296
2025-06-05 04:48:13 (42129): Guest Log: 00:00:00.000439 main     Package type: LINUX_64BITS_GENERIC
2025-06-05 04:48:13 (42129): Guest Log: 00:00:00.002638 main     5.2.32 r132073 started. Verbose level = 0
2025-06-05 04:48:13 (42129): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-05 04:48:13 (42129): Guest Log: [INFO] Mounting shared directory
2025-06-05 04:48:13 (42129): Guest Log: [INFO] Checking for init_data.xml
2025-06-05 04:48:19 (42129): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-05 04:48:19 (42129): Guest Log: [INFO] Detected branch: prod
2025-06-05 04:48:19 (42129): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-05 04:48:19 (42129): Guest Log: Copying input files
2025-06-05 04:48:20 (42129): Guest Log: Copied input files into RunAtlas.
2025-06-05 04:48:20 (42129): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-05 04:48:20 (42129): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-05 04:48:20 (42129): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-05 04:48:20 (42129): Guest Log: Further information can be found at the LHC@home message board.
2025-06-05 04:48:29 (42129): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-05 04:48:29 (42129): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-05 04:48:29 (42129): Guest Log: 2.6.3.0 1572 0 30144 146804 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-05 04:48:30 (42129): Guest Log: copied the webapp to /var/www
2025-06-05 04:48:30 (42129): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-05 04:48:30 (42129): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-05 04:48:30 (42129): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-05 04:48:30 (42129): Guest Log:  *** Starting ATLAS job. (PandaID=6678364511 taskID=45006595) ***
2025-06-05 06:26:52 (42129): Status Report: Elapsed Time: '6000.000000'
2025-06-05 06:26:52 (42129): Status Report: CPU Time: '20154.000000'
2025-06-05 08:05:53 (42129): Status Report: Elapsed Time: '12000.000000'
2025-06-05 08:05:53 (42129): Status Report: CPU Time: '41980.720000'
2025-06-05 08:38:23 (42129): Guest Log:  *** Job finished ***
2025-06-05 08:38:23 (42129): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:09,924 | INFO     | [data] copytool_out thread has finished
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:10,313 | INFO     | [job] control thread has finished
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:14,142 | INFO     | [data] queue_monitor thread has finished
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:15,223 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138110396224)>', '<ExcThread(monitor, started 140137493145344)>']
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:15,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:15,282 | INFO     | [monitor] control thread has ended
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,232 | INFO     | all workflow threads have been joined
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,232 | INFO     | end of generic workflow (traces error code: 0)
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,232 | INFO     | traces error code: 0
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,332 [wrapper] ==== pilot stdout END ====
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,341 [wrapper] ==== wrapper stdout RESUME ====
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,349 [wrapper] pilotpid: 5901
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,356 [wrapper] Pilot exit status: 0
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,492 [wrapper] pandaids: 6678364511
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,538 [wrapper] cleanup supervisor_pilot 14009 5902
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,547 [wrapper] Test setup, not cleaning
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,555 [wrapper] apfmon messages muted
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,564 [wrapper] ==== wrapper stdout END ====
2025-06-05 08:38:23 (42129): Guest Log: 2025-06-05 07:38:20,573 [wrapper] ==== wrapper stderr END ====
2025-06-05 08:38:23 (42129): Guest Log:  *** Error codes and diagnostics ***
2025-06-05 08:38:23 (42129): Guest Log:     "exeErrorCode": 0,
2025-06-05 08:38:23 (42129): Guest Log:     "exeErrorDiag": "",
2025-06-05 08:38:23 (42129): Guest Log:     "pilotErrorCode": 0,
2025-06-05 08:38:23 (42129): Guest Log:     "pilotErrorDiag": "",
2025-06-05 08:38:23 (42129): Guest Log:  *** Listing of results directory ***
2025-06-05 08:38:23 (42129): Guest Log: total 174228
2025-06-05 08:38:23 (42129): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 05:59 pilot3.tar.gz
2025-06-05 08:38:23 (42129): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 06:26 queuedata.json
2025-06-05 08:38:23 (42129): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 06:26 runpilot2-wrapper.sh
2025-06-05 08:38:23 (42129): Guest Log: -rw-r--r--. 1 atlas atlas      6308 Jun  5 03:48 init_data.xml
2025-06-05 08:38:23 (42129): Guest Log: -rw-r--r--. 1 atlas atlas    508883 Jun  5 03:48 input.tar.gz
2025-06-05 08:38:23 (42129): Guest Log: -rw-r--r--. 1 atlas atlas     15093 Jun  5 03:48 start_atlas.sh
2025-06-05 08:38:23 (42129): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  5 03:48 EVNT.45006593._002162.pool.root.1 -> /data/./ATLAS.root_0
2025-06-05 08:38:23 (42129): Guest Log: -rw-r--r--. 1 atlas atlas      2524 Jun  5 03:48 pandaJob.out
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas    987109 Jun  5 03:50 agis_schedconf.cvmfs.json
2025-06-05 08:38:23 (42129): Guest Log: drwx------. 4 atlas atlas      4096 Jun  5 03:50 pilot3
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas        95 Jun  5 07:37 pilot_heartbeat.json
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas 171767104 Jun  5 07:37 HITS.45006595._054011.pool.root.1
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas      1034 Jun  5 07:37 memory_monitor_summary.json
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  5 07:37 agis_ddmendpoints.agis.ALL.json
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas    306898 Jun  5 07:37 log.45006595._054011.job.log.tgz.1
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas      7727 Jun  5 07:38 heartbeat.json
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas      4413 Jun  5 07:38 pilotlog.txt
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas   1134076 Jun  5 07:38 log.45006595._054011.job.log.1
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas       357 Jun  5 07:38 output.list
2025-06-05 08:38:23 (42129): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  5 07:38 runtime_log
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas   1464320 Jun  5 07:38 result.tar.gz
2025-06-05 08:38:23 (42129): Guest Log: -rw-r--r--. 1 atlas atlas      8641 Jun  5 07:38 runtime_log.err
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas       673 Jun  5 07:38 bcxNDm2kwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmRqaKDmmUVQPm.diag
2025-06-05 08:38:23 (42129): Guest Log: Looking for outputfile HITS.45006595._054011.pool.root.1
2025-06-05 08:38:23 (42129): Guest Log: HITS file was successfully produced
2025-06-05 08:38:23 (42129): Guest Log: -rw-------. 1 atlas atlas 171767104 Jun  5 07:37 /home/atlas/RunAtlas/HITS.45006595._054011.pool.root.1
2025-06-05 08:38:24 (42129): Guest Log: Successfully finished the ATLAS job!
2025-06-05 08:38:24 (42129): Guest Log: Copying the results back to the shared directory!
2025-06-05 08:38:24 (42129): Guest Log:  *** Contents of shared directory: ***
2025-06-05 08:38:24 (42129): Guest Log: total 211408
2025-06-05 08:38:24 (42129): Guest Log: -rw-r--r--. 1 root root 214470889 Jun  5 03:47 ATLAS.root_0
2025-06-05 08:38:24 (42129): Guest Log: -rw-r--r--. 1 root root      6308 Jun  5 03:47 init_data.xml
2025-06-05 08:38:24 (42129): Guest Log: -rw-r--r--. 1 root root    508883 Jun  5 03:47 input.tar.gz
2025-06-05 08:38:24 (42129): Guest Log: -rw-r--r--. 1 root root   1464320 Jun  5 07:38 result.tar.gz
2025-06-05 08:38:24 (42129): Guest Log: -rw-r--r--. 1 root root     15093 Jun  5 03:47 start_atlas.sh
2025-06-05 08:38:24 (42129): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-05 08:38:24 (42129): VM Completion File Detected.
2025-06-05 08:38:24 (42129): Powering off VM.
2025-06-05 08:38:25 (42129): Successfully stopped VM.
2025-06-05 08:38:25 (42129): Deregistering VM. (boinc_e6f66f1878b01e40, slot#0)
2025-06-05 08:38:25 (42129): Removing network bandwidth throttle group from VM.
2025-06-05 08:38:25 (42129): Removing VM from VirtualBox.
08:38:30 (42129): called boinc_finish(0)

</stderr_txt>
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