Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:28:44 (3688057): wrapper (7.7.26015): starting
07:28:44 (3688057): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:28:44] Arguments: --nthreads 8
[2025-06-04 07:28:44] Threads: 8
[2025-06-04 07:28:44] Checking for CVMFS
[2025-06-04 07:28:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:28:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:28:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:28:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:28:45] 2.12.6.0 10171 31417 512284 146779 0 68 31086627 32935936 9822 16776704 2 141076879 99.707 112967337 25678 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:28:45] CVMFS is ok
[2025-06-04 07:28:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:28:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:28:45] Further information can be found at the LHC@home message board.
[2025-06-04 07:28:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:28:45] Checking for apptainer binary...
[2025-06-04 07:28:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:28:45] Running /usr/bin/apptainer --version
[2025-06-04 07:28:45] apptainer version 1.4.1-1.el9
[2025-06-04 07:28:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:28:45] c6-12-27-4.aglt2.org
[2025-06-04 07:28:45] apptainer works
[2025-06-04 07:28:45] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:28:45] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:28:45] Starting ATLAS job with PandaID=6678364519
[2025-06-04 07:28:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:28:10]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:28:10]  guid=e77ca748-ea29-46fe-95b0-f67ffe26d3b3
[2025-06-04 08:28:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:28:10]  is_altstaged=None
[2025-06-04 08:28:10]  is_tar=False
[2025-06-04 08:28:10]  lfn=log.45006595._054019.job.log.tgz.1
[2025-06-04 08:28:10]  mtime=0
[2025-06-04 08:28:10]  protocol_id=None
[2025-06-04 08:28:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:28:10]  replicas=None
[2025-06-04 08:28:10]  scope=mc23_13p6TeV
[2025-06-04 08:28:10]  status=None
[2025-06-04 08:28:10]  status_code=0
[2025-06-04 08:28:10]  storage_token=
[2025-06-04 08:28:10]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678364519/log.45006595._054019.job.log.tgz.1
[2025-06-04 08:28:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/67/log.45006595._054019.job.log.tgz.1
[2025-06-04 08:28:10]  workdir=None
[2025-06-04 08:28:10] ]
[2025-06-04 08:28:10] 2025-06-04 12:27:44,324 | INFO     | transferring file log.45006595._054019.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678364519/log.45006595._054019.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:28:10] 2025-06-04 12:27:44,324 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678364519/log.45006595._054019.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._054019.job
[2025-06-04 08:28:10] 2025-06-04 12:27:44,342 | INFO     | adding to output.list: log.45006595._054019.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/67/log.45006595._054019.job.log.tg
[2025-06-04 08:28:10] 2025-06-04 12:27:44,343 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:28:10] 2025-06-04 12:27:44,343 | INFO     | summary of transferred files:
[2025-06-04 08:28:10] 2025-06-04 12:27:44,343 | INFO     |  -- lfn=log.45006595._054019.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:28:10] 2025-06-04 12:27:44,343 | INFO     | stage-out finished correctly
[2025-06-04 08:28:10] 2025-06-04 12:27:45,017 | INFO     | monitor loop #265: job 0:6678364519 is in state 'finished'
[2025-06-04 08:28:10] 2025-06-04 12:27:45,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:28:10] 2025-06-04 12:27:45,722 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:28:10] 2025-06-04 12:27:47,520 | INFO     | monitor loop #266: job 0:6678364519 is in state 'finished'
[2025-06-04 08:28:10] 2025-06-04 12:27:47,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:28:10] 2025-06-04 12:27:47,963 | INFO     | job 6678364519 has state=finished
[2025-06-04 08:28:10] 2025-06-04 12:27:47,963 | INFO     | preparing for final server update for job 6678364519 in state='finished'
[2025-06-04 08:28:10] 2025-06-04 12:27:47,964 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:28:10] 2025-06-04 12:27:47,964 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:28:10] 2025-06-04 12:27:47,964 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:28:10] 2025-06-04 12:27:47,964 | INFO     | job 6678364519 has finished - writing final server update
[2025-06-04 08:28:10] 2025-06-04 12:27:47,965 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:28:10] 2025-06-04 12:27:47,983 | INFO     | executing command: lscpu
[2025-06-04 08:28:10] 2025-06-04 12:27:48,077 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:28:10] 2025-06-04 12:27:50,023 | INFO     | monitor loop #267: job 0:6678364519 is in state 'finished'
[2025-06-04 08:28:10] 2025-06-04 12:27:50,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:28:10] 2025-06-04 12:27:50,901 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:28:10] 2025-06-04 12:27:50,902 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678364519/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:28:10] 2025-06-04 12:27:50,902 | INFO     | extracted standard info from prmon json
[2025-06-04 08:28:10] 2025-06-04 12:27:50,902 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:28:10] 2025-06-04 12:27:50,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:28:10] 2025-06-04 12:27:50,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:28:10] 2025-06-04 12:27:50,903 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:28:10] 2025-06-04 12:27:50,904 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:28:10] 2025-06-04 12:27:50,904 | INFO     | sum of square deviations: 41117050.0
[2025-06-04 08:28:10] 2025-06-04 12:27:50,904 | INFO     | sum of deviations: 4422050186.0
[2025-06-04 08:28:10] 2025-06-04 12:27:50,904 | INFO     | mean x: 1749038386.0
[2025-06-04 08:28:10] 2025-06-04 12:27:50,904 | INFO     | mean y: 2240884.9411764704
[2025-06-04 08:28:10] 2025-06-04 12:27:50,904 | INFO     | -- intersect: -188103071148.2042
[2025-06-04 08:28:10] 2025-06-04 12:27:50,904 | INFO     | intersect: -188103071148.2042
[2025-06-04 08:28:10] 2025-06-04 12:27:50,904 | INFO     | chi2: 0.5562133315280533
[2025-06-04 08:28:10] 2025-06-04 12:27:50,904 | INFO     | -- intersect: -188103071148.2042
[2025-06-04 08:28:10] 2025-06-04 12:27:50,904 | INFO     | current memory leak: 107.55 B/s (using 51 data points, chi2=0.56)
[2025-06-04 08:28:10] 2025-06-04 12:27:50,905 | INFO     | ..............................
[2025-06-04 08:28:10] 2025-06-04 12:27:50,905 | INFO     | . Timing measurements:
[2025-06-04 08:28:10] 2025-06-04 12:27:50,905 | INFO     | . get job = 0 s
[2025-06-04 08:28:10] 2025-06-04 12:27:50,905 | INFO     | . initial setup = 2 s
[2025-06-04 08:28:10] 2025-06-04 12:27:50,905 | INFO     | . payload setup = 4 s
[2025-06-04 08:28:10] 2025-06-04 12:27:50,905 | INFO     | . stage-in = 0 s
[2025-06-04 08:28:10] 2025-06-04 12:27:50,905 | INFO     | . payload execution = 3507 s
[2025-06-04 08:28:10] 2025-06-04 12:27:50,905 | INFO     | . stage-out = 0 s
[2025-06-04 08:28:10] 2025-06-04 12:27:50,905 | INFO     | . log creation = 0 s
[2025-06-04 08:28:10] 2025-06-04 12:27:50,905 | INFO     | ..............................
[2025-06-04 08:28:10] 2025-06-04 12:27:50,954 | INFO     | 
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | job summary report
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | --------------------------------------------------
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | PanDA job id: 6678364519
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | task id: 45006595
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | errors: (none)
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | pilot state: finished 
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | transexitcode: 0
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | exeerrorcode: 0
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | exeerrordiag: 
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | exitcode: 0
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | exitmsg: OK
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | cpuconsumptiontime: 22996 s
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | nevents: 400
[2025-06-04 08:28:10] 2025-06-04 12:27:50,955 | INFO     | neventsw: 0
[2025-06-04 08:28:10] 2025-06-04 12:27:50,956 | INFO     | pid: 3700634
[2025-06-04 08:28:10] 2025-06-04 12:27:50,956 | INFO     | pgrp: 3700634
[2025-06-04 08:28:10] 2025-06-04 12:27:50,956 | INFO     | corecount: 8
[2025-06-04 08:28:10] 2025-06-04 12:27:50,956 | INFO     | event service: False
[2025-06-04 08:28:10] 2025-06-04 12:27:50,956 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 3516: 2431047, 3517: 2439988, 3518: 2440044, 3523: 2440342}
[2025-06-04 08:28:10] 2025-06-04 12:27:50,956 | INFO     | --------------------------------------------------
[2025-06-04 08:28:10] 2025-06-04 12:27:50,956 | INFO     | 
[2025-06-04 08:28:10] 2025-06-04 12:27:50,956 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 08:28:10] 2025-06-04 12:27:50,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,971 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:28:10] 2025-06-04 12:27:50,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:28:10] 2025-06-04 12:27:50,972 | INFO     | job 6678364519 has completed (purged errors)
[2025-06-04 08:28:10] 2025-06-04 12:27:50,972 | INFO     | overall cleanup function is called
[2025-06-04 08:28:10] 2025-06-04 12:27:51,980 | INFO     | --- collectZombieJob: --- 10, [3700634]
[2025-06-04 08:28:10] 2025-06-04 12:27:51,980 | INFO     | zombie collector waiting for pid 3700634
[2025-06-04 08:28:10] 2025-06-04 12:27:51,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:28:10] 2025-06-04 12:27:51,980 | INFO     | collected zombie processes
[2025-06-04 08:28:10] 2025-06-04 12:27:51,980 | INFO     | will attempt to kill all subprocesses of pid=3700634
[2025-06-04 08:28:10] 2025-06-04 12:27:52,295 | INFO     | process IDs to be killed: [3700634] (in reverse order)
[2025-06-04 08:28:10] 2025-06-04 12:27:52,384 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:28:10] 2025-06-04 12:27:52,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:28:10] 2025-06-04 12:27:52,396 | INFO     | did not find any defunct processes belonging to 3700634
[2025-06-04 08:28:10] 2025-06-04 12:27:52,408 | INFO     | did not find any defunct processes belonging to 3700634
[2025-06-04 08:28:10] 2025-06-04 12:27:52,409 | INFO     | ready for new job
[2025-06-04 08:28:10] 2025-06-04 12:27:52,409 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:28:10] 2025-06-04 12:27:52,410 | INFO     | **************************************
[2025-06-04 08:28:10] 2025-06-04 12:27:52,410 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:28:10] 2025-06-04 12:27:52,410 | INFO     | **************************************
[2025-06-04 08:28:10] 2025-06-04 12:27:52,410 | INFO     | 
[2025-06-04 08:28:10] 2025-06-04 12:27:52,427 | INFO     | architecture information:
[2025-06-04 08:28:10] 2025-06-04 12:27:52,427 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:28:10] 2025-06-04 12:27:52,443 | INFO     | cat /etc/os-release:
[2025-06-04 08:28:10] NAME="CentOS Linux"
[2025-06-04 08:28:10] VERSION="7 (Core)"
[2025-06-04 08:28:10] ID="centos"
[2025-06-04 08:28:10] ID_LIKE="rhel fedora"
[2025-06-04 08:28:10] VERSION_ID="7"
[2025-06-04 08:28:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:28:10] ANSI_COLOR="0;31"
[2025-06-04 08:28:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:28:10] HOME_URL="https://www.centos.org/"
[2025-06-04 08:28:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:28:10] 
[2025-06-04 08:28:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:28:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:28:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:28:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:28:10] 
[2025-06-04 08:28:10] 2025-06-04 12:27:52,443 | INFO     | **************************************
[2025-06-04 08:28:10] 2025-06-04 12:27:52,946 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 08:28:10] 2025-06-04 12:27:52,963 | INFO     | sufficient remaining disk space (95455019008 B)
[2025-06-04 08:28:10] 2025-06-04 12:27:52,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:28:10] 2025-06-04 12:27:52,964 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:28:10] 2025-06-04 12:27:52,964 | INFO     | update_server=False
[2025-06-04 08:28:10] 2025-06-04 12:27:52,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:28:10] 2025-06-04 12:27:52,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:28:10] 2025-06-04 12:27:53,140 | INFO     | all data control threads have been joined
[2025-06-04 08:28:10] 2025-06-04 12:27:53,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:28:10] 2025-06-04 12:27:53,532 | INFO     | aborting loop
[2025-06-04 08:28:10] 2025-06-04 12:27:53,594 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:28:10] 2025-06-04 12:27:53,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:28:10] 2025-06-04 12:27:53,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:28:10] 2025-06-04 12:27:53,969 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:54,141 | INFO     | all payload control threads have been joined
[2025-06-04 08:28:10] 2025-06-04 12:27:54,146 | INFO     | [data] control thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:54,224 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:54,347 | INFO     | all job control threads have been joined
[2025-06-04 08:28:10] 2025-06-04 12:27:54,516 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:54,538 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:54,586 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:54,699 | INFO     | [job] validate thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:54,764 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:54,794 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:54,965 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:55,005 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:55,146 | INFO     | [payload] control thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:55,353 | INFO     | [job] control thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:27:55,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:28:10] 2025-06-04 12:27:56,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:28:10] 2025-06-04 12:27:56,969 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:28:00,319 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:28:03,900 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:28:10] 2025-06-04 12:28:04,905 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:28:10] 2025-06-04 12:28:05,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473392330560)>', '<ExcThread(monitor, started 140472542557952)>']
[2025-06-04 08:28:10] 2025-06-04 12:28:05,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:28:10] 2025-06-04 12:28:05,650 | INFO     | [monitor] control thread has ended
[2025-06-04 08:28:10] 2025-06-04 12:28:10,506 | INFO     | all workflow threads have been joined
[2025-06-04 08:28:10] 2025-06-04 12:28:10,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:28:10] 2025-06-04 12:28:10,507 | INFO     | traces error code: 0
[2025-06-04 08:28:10] 2025-06-04 12:28:10,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:28:10] 2025-06-04 12:28:10,644 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:28:10] 2025-06-04 12:28:10,647 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:28:10] 2025-06-04 12:28:10,649 [wrapper] pilotpid: 3692516
[2025-06-04 08:28:10] 2025-06-04 12:28:10,651 [wrapper] Pilot exit status: 0
[2025-06-04 08:28:10] 2025-06-04 12:28:10,660 [wrapper] pandaids: 6678364519
[2025-06-04 08:28:10] 2025-06-04 12:28:10,720 [wrapper] cleanup supervisor_pilot 3845393 3692517
[2025-06-04 08:28:10] 2025-06-04 12:28:10,723 [wrapper] Test setup, not cleaning
[2025-06-04 08:28:10] 2025-06-04 12:28:10,724 [wrapper] apfmon messages muted
[2025-06-04 08:28:10] 2025-06-04 12:28:10,726 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:28:10] 2025-06-04 12:28:10,728 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:28:10]  *** Error codes and diagnostics ***
[2025-06-04 08:28:10]     "exeErrorCode": 0,
[2025-06-04 08:28:10]     "exeErrorDiag": "",
[2025-06-04 08:28:10]     "pilotErrorCode": 0,
[2025-06-04 08:28:10]     "pilotErrorDiag": "",
[2025-06-04 08:28:10]  *** Listing of results directory ***
[2025-06-04 08:28:10] total 392552
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:26 queuedata.json
[2025-06-04 08:28:10] -rwx------. 1 boincer umatlas     37140 Jun  4 02:26 runpilot2-wrapper.sh
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:28:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:28 run_atlas
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:28 job.xml
[2025-06-04 08:28:10] -rw-r--r--. 2 boincer umatlas 214470889 Jun  4 07:28 EVNT.45006593._002162.pool.root.1
[2025-06-04 08:28:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:28 start_atlas.sh
[2025-06-04 08:28:10] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:28 shared
[2025-06-04 08:28:10] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 07:28 input.tar.gz
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:28 boinc_lockfile
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:28 pandaJob.out
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas    986812 Jun  4 07:28 agis_schedconf.cvmfs.json
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas   1603667 Jun  4 07:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:28:10] drwx------. 4 boincer umatlas      4096 Jun  4 07:28 pilot3
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas      6859 Jun  4 08:22 init_data.xml
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas        95 Jun  4 08:27 pilot_heartbeat.json
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas 182368701 Jun  4 08:27 HITS.45006595._054019.pool.root.1
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:27 boinc_task_state.xml
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas      1030 Jun  4 08:27 memory_monitor_summary.json
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas    289726 Jun  4 08:27 log.45006595._054019.job.log.tgz.1
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas      7715 Jun  4 08:27 heartbeat.json
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:28 boinc_mmap_file
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:28 wrapper_checkpoint.txt
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas      4425 Jun  4 08:28 pilotlog.txt
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas    359578 Jun  4 08:28 log.45006595._054019.job.log.1
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas       357 Jun  4 08:28 output.list
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:28 runtime_log
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas    665600 Jun  4 08:28 result.tar.gz
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas       652 Jun  4 08:28 syQODm2kwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZqaKDmQMGkzn.diag
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 08:28 runtime_log.err
[2025-06-04 08:28:10] -rw-r--r--. 1 boincer umatlas     21281 Jun  4 08:28 stderr.txt
[2025-06-04 08:28:10] HITS file was successfully produced:
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas 182368701 Jun  4 08:27 shared/HITS.pool.root.1
[2025-06-04 08:28:10]  *** Contents of shared directory: ***
[2025-06-04 08:28:10] total 388720
[2025-06-04 08:28:10] -rw-r--r--. 2 boincer umatlas 214470889 Jun  4 07:28 ATLAS.root_0
[2025-06-04 08:28:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:28 start_atlas.sh
[2025-06-04 08:28:10] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 07:28 input.tar.gz
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas 182368701 Jun  4 08:27 HITS.pool.root.1
[2025-06-04 08:28:10] -rw-------. 1 boincer umatlas    665600 Jun  4 08:28 result.tar.gz
08:28:12 (3688057): run_atlas exited; CPU time 23117.886954
08:28:12 (3688057): called boinc_finish(0)

</stderr_txt>
]]>

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