Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:22:09 (423294): wrapper (7.7.26015): starting
07:22:09 (423294): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 07:22:09] Arguments: --nthreads 10
[2025-06-04 07:22:09] Threads: 10
[2025-06-04 07:22:09] Checking for CVMFS
[2025-06-04 07:22:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:22:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:22:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:22:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:22:10] 2.12.6.0 9388 1270 169724 146779 3 124 31268368 32935937 12934 16776704 0 6858426 99.676 4585101 31772 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:22:10] CVMFS is ok
[2025-06-04 07:22:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:22:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:22:10] Further information can be found at the LHC@home message board.
[2025-06-04 07:22:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:22:10] Checking for apptainer binary...
[2025-06-04 07:22:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:22:10] Running /usr/bin/apptainer --version
[2025-06-04 07:22:10] apptainer version 1.4.1-1.el9
[2025-06-04 07:22:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:22:10] c-8-37.aglt2.org
[2025-06-04 07:22:10] apptainer works
[2025-06-04 07:22:10] Set ATHENA_PROC_NUMBER=10
[2025-06-04 07:22:10] Set ATHENA_CORE_NUMBER=10
[2025-06-04 07:22:10] Starting ATLAS job with PandaID=6678312565
[2025-06-04 07:22:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:35:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:35:33]  is_tar=False
[2025-06-04 08:35:33]  lfn=log.45006595._052011.job.log.tgz.1
[2025-06-04 08:35:33]  mtime=0
[2025-06-04 08:35:33]  protocol_id=None
[2025-06-04 08:35:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:35:33]  replicas=None
[2025-06-04 08:35:33]  scope=mc23_13p6TeV
[2025-06-04 08:35:33]  status=None
[2025-06-04 08:35:33]  status_code=0
[2025-06-04 08:35:33]  storage_token=
[2025-06-04 08:35:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678312565/log.45006595._052011.job.log.tgz.1
[2025-06-04 08:35:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/5a/log.45006595._052011.job.log.tgz.1
[2025-06-04 08:35:33]  workdir=None
[2025-06-04 08:35:33] ]
[2025-06-04 08:35:33] 2025-06-04 12:35:06,316 | INFO     | transferring file log.45006595._052011.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678312565/log.45006595._052011.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:35:33] 2025-06-04 12:35:06,316 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678312565/log.45006595._052011.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._052011.job
[2025-06-04 08:35:33] 2025-06-04 12:35:06,334 | INFO     | adding to output.list: log.45006595._052011.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/5a/log.45006595._052011.job.log.tg
[2025-06-04 08:35:33] 2025-06-04 12:35:06,335 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:35:33] 2025-06-04 12:35:06,336 | INFO     | summary of transferred files:
[2025-06-04 08:35:33] 2025-06-04 12:35:06,336 | INFO     |  -- lfn=log.45006595._052011.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:35:33] 2025-06-04 12:35:06,336 | INFO     | stage-out finished correctly
[2025-06-04 08:35:33] 2025-06-04 12:35:06,661 | WARNING  | process 434378 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:35:33] 2025-06-04 12:35:06,662 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678312565/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:35:33] 2025-06-04 12:35:06,947 | INFO     | number of running child processes to parent process 434378: 1
[2025-06-04 08:35:33] 2025-06-04 12:35:06,947 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:35:33] 2025-06-04 12:35:06,961 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:35:33] 2025-06-04 12:35:09,450 | INFO     | monitor loop #325: job 0:6678312565 is in state 'finished'
[2025-06-04 08:35:33] 2025-06-04 12:35:09,450 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:35:33] 2025-06-04 12:35:09,865 | INFO     | job 6678312565 has state=finished
[2025-06-04 08:35:33] 2025-06-04 12:35:09,866 | INFO     | preparing for final server update for job 6678312565 in state='finished'
[2025-06-04 08:35:33] 2025-06-04 12:35:09,926 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 08:35:33] 2025-06-04 12:35:09,927 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:35:33] 2025-06-04 12:35:09,927 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:35:33] 2025-06-04 12:35:09,927 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:35:33] 2025-06-04 12:35:09,928 | INFO     | job 6678312565 has finished - writing final server update
[2025-06-04 08:35:33] 2025-06-04 12:35:09,928 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:35:33] 2025-06-04 12:35:09,943 | INFO     | executing command: lscpu
[2025-06-04 08:35:33] 2025-06-04 12:35:10,011 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:35:33] 2025-06-04 12:35:11,952 | INFO     | monitor loop #326: job 0:6678312565 is in state 'finished'
[2025-06-04 08:35:33] 2025-06-04 12:35:11,953 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:35:33] 2025-06-04 12:35:13,639 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:35:33] 2025-06-04 12:35:13,640 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678312565/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:35:33] 2025-06-04 12:35:13,640 | INFO     | extracted standard info from prmon json
[2025-06-04 08:35:33] 2025-06-04 12:35:13,640 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:35:33] 2025-06-04 12:35:13,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:35:33] 2025-06-04 12:35:13,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:35:33] 2025-06-04 12:35:13,641 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:35:33] 2025-06-04 12:35:13,642 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:35:33] 2025-06-04 12:35:13,642 | INFO     | sum of square deviations: 85136480.0
[2025-06-04 08:35:33] 2025-06-04 12:35:13,643 | INFO     | sum of deviations: 977455460.0000006
[2025-06-04 08:35:33] 2025-06-04 12:35:13,643 | INFO     | mean x: 1749038424.0
[2025-06-04 08:35:33] 2025-06-04 12:35:13,643 | INFO     | mean y: 2496683.9384615384
[2025-06-04 08:35:33] 2025-06-04 12:35:13,643 | INFO     | -- intersect: -20078286046.197857
[2025-06-04 08:35:33] 2025-06-04 12:35:13,643 | INFO     | intersect: -20078286046.197857
[2025-06-04 08:35:33] 2025-06-04 12:35:13,643 | INFO     | chi2: 1.3157880211524213
[2025-06-04 08:35:33] 2025-06-04 12:35:13,643 | INFO     | -- intersect: -20078286046.197857
[2025-06-04 08:35:33] 2025-06-04 12:35:13,643 | INFO     | current memory leak: 11.48 B/s (using 65 data points, chi2=1.32)
[2025-06-04 08:35:33] 2025-06-04 12:35:13,644 | INFO     | ..............................
[2025-06-04 08:35:33] 2025-06-04 12:35:13,644 | INFO     | . Timing measurements:
[2025-06-04 08:35:33] 2025-06-04 12:35:13,644 | INFO     | . get job = 0 s
[2025-06-04 08:35:33] 2025-06-04 12:35:13,644 | INFO     | . initial setup = 2 s
[2025-06-04 08:35:33] 2025-06-04 12:35:13,644 | INFO     | . payload setup = 6 s
[2025-06-04 08:35:33] 2025-06-04 12:35:13,644 | INFO     | . stage-in = 0 s
[2025-06-04 08:35:33] 2025-06-04 12:35:13,644 | INFO     | . payload execution = 4342 s
[2025-06-04 08:35:33] 2025-06-04 12:35:13,644 | INFO     | . stage-out = 0 s
[2025-06-04 08:35:33] 2025-06-04 12:35:13,644 | INFO     | . log creation = 0 s
[2025-06-04 08:35:33] 2025-06-04 12:35:13,644 | INFO     | ..............................
[2025-06-04 08:35:33] 2025-06-04 12:35:13,868 | INFO     | 
[2025-06-04 08:35:33] 2025-06-04 12:35:13,868 | INFO     | job summary report
[2025-06-04 08:35:33] 2025-06-04 12:35:13,868 | INFO     | --------------------------------------------------
[2025-06-04 08:35:33] 2025-06-04 12:35:13,869 | INFO     | PanDA job id: 6678312565
[2025-06-04 08:35:33] 2025-06-04 12:35:13,869 | INFO     | task id: 45006595
[2025-06-04 08:35:33] 2025-06-04 12:35:13,869 | INFO     | errors: (none)
[2025-06-04 08:35:33] 2025-06-04 12:35:13,869 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:35:33] 2025-06-04 12:35:13,869 | INFO     | pilot state: finished 
[2025-06-04 08:35:33] 2025-06-04 12:35:13,869 | INFO     | transexitcode: 0
[2025-06-04 08:35:33] 2025-06-04 12:35:13,869 | INFO     | exeerrorcode: 0
[2025-06-04 08:35:33] 2025-06-04 12:35:13,869 | INFO     | exeerrordiag: 
[2025-06-04 08:35:33] 2025-06-04 12:35:13,869 | INFO     | exitcode: 0
[2025-06-04 08:35:33] 2025-06-04 12:35:13,870 | INFO     | exitmsg: OK
[2025-06-04 08:35:33] 2025-06-04 12:35:13,870 | INFO     | cpuconsumptiontime: 36021 s
[2025-06-04 08:35:33] 2025-06-04 12:35:13,870 | INFO     | nevents: 400
[2025-06-04 08:35:33] 2025-06-04 12:35:13,870 | INFO     | neventsw: 0
[2025-06-04 08:35:33] 2025-06-04 12:35:13,870 | INFO     | pid: 434378
[2025-06-04 08:35:33] 2025-06-04 12:35:13,870 | INFO     | pgrp: 434378
[2025-06-04 08:35:33] 2025-06-04 12:35:13,870 | INFO     | corecount: 10
[2025-06-04 08:35:33] 2025-06-04 12:35:13,870 | INFO     | event service: False
[2025-06-04 08:35:33] 2025-06-04 12:35:13,870 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 4349: 2431420, 4350: 2440361, 4351: 2440417, 4357: 2440715}
[2025-06-04 08:35:33] 2025-06-04 12:35:13,870 | INFO     | --------------------------------------------------
[2025-06-04 08:35:33] 2025-06-04 12:35:13,871 | INFO     | 
[2025-06-04 08:35:33] 2025-06-04 12:35:13,871 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:35:33] 2025-06-04 12:35:13,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,890 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,890 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,890 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:35:33] 2025-06-04 12:35:13,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:35:33] 2025-06-04 12:35:13,892 | INFO     | job 6678312565 has completed (purged errors)
[2025-06-04 08:35:33] 2025-06-04 12:35:13,892 | INFO     | overall cleanup function is called
[2025-06-04 08:35:33] 2025-06-04 12:35:14,900 | INFO     | --- collectZombieJob: --- 10, [434378]
[2025-06-04 08:35:33] 2025-06-04 12:35:14,901 | INFO     | zombie collector waiting for pid 434378
[2025-06-04 08:35:33] 2025-06-04 12:35:14,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:35:33] 2025-06-04 12:35:14,901 | INFO     | collected zombie processes
[2025-06-04 08:35:33] 2025-06-04 12:35:14,901 | INFO     | will attempt to kill all subprocesses of pid=434378
[2025-06-04 08:35:33] 2025-06-04 12:35:15,189 | INFO     | process IDs to be killed: [434378] (in reverse order)
[2025-06-04 08:35:33] 2025-06-04 12:35:15,282 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:35:33] 2025-06-04 12:35:15,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:35:33] 2025-06-04 12:35:15,294 | INFO     | did not find any defunct processes belonging to 434378
[2025-06-04 08:35:33] 2025-06-04 12:35:15,305 | INFO     | did not find any defunct processes belonging to 434378
[2025-06-04 08:35:33] 2025-06-04 12:35:15,306 | INFO     | ready for new job
[2025-06-04 08:35:33] 2025-06-04 12:35:15,306 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:35:33] 2025-06-04 12:35:15,308 | INFO     | **************************************
[2025-06-04 08:35:33] 2025-06-04 12:35:15,308 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:35:33] 2025-06-04 12:35:15,308 | INFO     | **************************************
[2025-06-04 08:35:33] 2025-06-04 12:35:15,308 | INFO     | 
[2025-06-04 08:35:33] 2025-06-04 12:35:15,322 | INFO     | architecture information:
[2025-06-04 08:35:33] 2025-06-04 12:35:15,323 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:35:33] 2025-06-04 12:35:15,339 | INFO     | cat /etc/os-release:
[2025-06-04 08:35:33] NAME="CentOS Linux"
[2025-06-04 08:35:33] VERSION="7 (Core)"
[2025-06-04 08:35:33] ID="centos"
[2025-06-04 08:35:33] ID_LIKE="rhel fedora"
[2025-06-04 08:35:33] VERSION_ID="7"
[2025-06-04 08:35:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:35:33] ANSI_COLOR="0;31"
[2025-06-04 08:35:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:35:33] HOME_URL="https://www.centos.org/"
[2025-06-04 08:35:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:35:33] 
[2025-06-04 08:35:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:35:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:35:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:35:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:35:33] 
[2025-06-04 08:35:33] 2025-06-04 12:35:15,340 | INFO     | **************************************
[2025-06-04 08:35:33] 2025-06-04 12:35:15,842 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:35:33] 2025-06-04 12:35:15,859 | INFO     | sufficient remaining disk space (76598476800 B)
[2025-06-04 08:35:33] 2025-06-04 12:35:15,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:35:33] 2025-06-04 12:35:15,859 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:35:33] 2025-06-04 12:35:15,860 | INFO     | update_server=False
[2025-06-04 08:35:33] 2025-06-04 12:35:15,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:35:33] 2025-06-04 12:35:15,860 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:35:33] 2025-06-04 12:35:15,860 | INFO     | aborting loop
[2025-06-04 08:35:33] 2025-06-04 12:35:15,941 | INFO     | all data control threads have been joined
[2025-06-04 08:35:33] 2025-06-04 12:35:15,942 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:35:33] 2025-06-04 12:35:15,942 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:35:33] 2025-06-04 12:35:15,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:35:33] 2025-06-04 12:35:16,865 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:16,866 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:16,947 | INFO     | [data] control thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:16,954 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:35:33] 2025-06-04 12:35:16,983 | INFO     | all payload control threads have been joined
[2025-06-04 08:35:33] 2025-06-04 12:35:17,169 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:17,337 | INFO     | all job control threads have been joined
[2025-06-04 08:35:33] 2025-06-04 12:35:17,575 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:35:33] 2025-06-04 12:35:17,646 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:17,989 | INFO     | [payload] control thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:18,110 | INFO     | [job] validate thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:18,116 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:18,236 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:18,260 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:18,325 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:18,343 | INFO     | [job] control thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:18,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:35:33] 2025-06-04 12:35:18,961 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:19,717 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:21,581 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:26,161 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:35:33] 2025-06-04 12:35:27,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:35:33] 2025-06-04 12:35:28,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975109842752)>', '<ExcThread(monitor, started 139974326351616)>']
[2025-06-04 08:35:33] 2025-06-04 12:35:28,998 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:35:33] 2025-06-04 12:35:28,999 | INFO     | [monitor] control thread has ended
[2025-06-04 08:35:33] 2025-06-04 12:35:33,555 | INFO     | all workflow threads have been joined
[2025-06-04 08:35:33] 2025-06-04 12:35:33,555 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:35:33] 2025-06-04 12:35:33,556 | INFO     | traces error code: 0
[2025-06-04 08:35:33] 2025-06-04 12:35:33,556 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:35:33] 2025-06-04 12:35:33,716 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:35:33] 2025-06-04 12:35:33,718 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:35:33] 2025-06-04 12:35:33,721 [wrapper] pilotpid: 426899
[2025-06-04 08:35:33] 2025-06-04 12:35:33,724 [wrapper] Pilot exit status: 0
[2025-06-04 08:35:33] 2025-06-04 12:35:33,734 [wrapper] pandaids: 6678312565
[2025-06-04 08:35:33] 2025-06-04 12:35:33,791 [wrapper] cleanup supervisor_pilot  726245 426900
[2025-06-04 08:35:33] 2025-06-04 12:35:33,794 [wrapper] Test setup, not cleaning
[2025-06-04 08:35:33] 2025-06-04 12:35:33,797 [wrapper] apfmon messages muted
[2025-06-04 08:35:33] 2025-06-04 12:35:33,800 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:35:33] 2025-06-04 12:35:33,802 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:35:33]  *** Error codes and diagnostics ***
[2025-06-04 08:35:33]     "exeErrorCode": 0,
[2025-06-04 08:35:33]     "exeErrorDiag": "",
[2025-06-04 08:35:33]     "pilotErrorCode": 0,
[2025-06-04 08:35:33]     "pilotErrorDiag": "",
[2025-06-04 08:35:33]  *** Listing of results directory ***
[2025-06-04 08:35:33] total 387888
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 00:12 queuedata.json
[2025-06-04 08:35:33] -rwx------. 1 boincer umatlas     37140 Jun  4 00:12 runpilot2-wrapper.sh
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:35:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:22 run_atlas
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:22 job.xml
[2025-06-04 08:35:33] -rw-r--r--. 2 boincer umatlas 213757419 Jun  4 07:22 EVNT.45006593._002083.pool.root.1
[2025-06-04 08:35:33] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 07:22 input.tar.gz
[2025-06-04 08:35:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:22 start_atlas.sh
[2025-06-04 08:35:33] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:22 shared
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:22 boinc_lockfile
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:22 pandaJob.out
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas    986812 Jun  4 07:22 agis_schedconf.cvmfs.json
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas   1603667 Jun  4 07:22 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:35:33] drwx------. 4 boincer umatlas      4096 Jun  4 07:22 pilot3
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas      6658 Jun  4 08:31 init_data.xml
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:34 boinc_task_state.xml
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas 178087357 Jun  4 08:34 HITS.45006595._052011.pool.root.1
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas        95 Jun  4 08:34 pilot_heartbeat.json
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas      1041 Jun  4 08:35 memory_monitor_summary.json
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas    329234 Jun  4 08:35 log.45006595._052011.job.log.tgz.1
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas      7720 Jun  4 08:35 heartbeat.json
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:35 boinc_mmap_file
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:35 wrapper_checkpoint.txt
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas      4425 Jun  4 08:35 pilotlog.txt
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas    433196 Jun  4 08:35 log.45006595._052011.job.log.1
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas       357 Jun  4 08:35 output.list
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:35 runtime_log
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas    778240 Jun  4 08:35 result.tar.gz
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas      8651 Jun  4 08:35 runtime_log.err
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas       649 Jun  4 08:35 HdlMDmxfug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO9mKDm85of2m.diag
[2025-06-04 08:35:33] -rw-r--r--. 1 boincer umatlas     21474 Jun  4 08:35 stderr.txt
[2025-06-04 08:35:33] HITS file was successfully produced:
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas 178087357 Jun  4 08:34 shared/HITS.pool.root.1
[2025-06-04 08:35:33]  *** Contents of shared directory: ***
[2025-06-04 08:35:33] total 383944
[2025-06-04 08:35:33] -rw-r--r--. 2 boincer umatlas 213757419 Jun  4 07:22 ATLAS.root_0
[2025-06-04 08:35:33] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 07:22 input.tar.gz
[2025-06-04 08:35:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:22 start_atlas.sh
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas 178087357 Jun  4 08:34 HITS.pool.root.1
[2025-06-04 08:35:33] -rw-------. 1 boincer umatlas    778240 Jun  4 08:35 result.tar.gz
08:35:35 (423294): run_atlas exited; CPU time 36136.798274
08:35:35 (423294): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN