Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:39:12 (1909): wrapper (7.7.26015): starting
21:39:12 (1909): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:39:12] Arguments: --nthreads 8
[2025-06-04 21:39:12] Threads: 8
[2025-06-04 21:39:12] Checking for CVMFS
[2025-06-04 21:39:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:39:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:39:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:39:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:39:14] 2.11.2.0 6418 33651 94360 146792 0 248 23588664 25165825 3257 130560 0 17585439 99.748 20888156 2197 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 21:39:14] CVMFS is ok
[2025-06-04 21:39:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:39:14] Checking for apptainer binary...
[2025-06-04 21:39:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:39:14] Running /usr/bin/apptainer --version
[2025-06-04 21:39:14] apptainer version 1.3.2-1.el7
[2025-06-04 21:39:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:39:16] cg-vwn357.simple-grid.lan
[2025-06-04 21:39:16] apptainer works
[2025-06-04 21:39:16] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:39:16] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:39:16] Starting ATLAS job with PandaID=6666711139
[2025-06-04 21:39:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:32:15]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:32:15] 2025-06-05 01:10:06,856 | INFO     | monitor loop #1408: job 0:6666711139 is in state 'finished'
[2025-06-05 04:32:15] 2025-06-05 01:10:06,857 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:32:15] 2025-06-05 01:10:09,363 | INFO     | monitor loop #1409: job 0:6666711139 is in state 'finished'
[2025-06-05 04:32:15] 2025-06-05 01:10:09,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:32:15] 2025-06-05 01:10:11,868 | INFO     | monitor loop #1410: job 0:6666711139 is in state 'finished'
[2025-06-05 04:32:15] 2025-06-05 01:10:11,869 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:32:15] 2025-06-05 01:10:13,398 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 04:32:15] 2025-06-05 01:10:13,399 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6666711139/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:32:15] 2025-06-05 01:10:13,399 | INFO     | extracted standard info from prmon json
[2025-06-05 04:32:15] 2025-06-05 01:10:13,400 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:32:15] 2025-06-05 01:10:13,400 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:32:15] 2025-06-05 01:10:13,400 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:32:15] 2025-06-05 01:10:13,400 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:32:15] 2025-06-05 01:10:13,409 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:32:15] 2025-06-05 01:10:13,410 | INFO     | sum of square deviations: 9599817202.5
[2025-06-05 04:32:15] 2025-06-05 01:10:13,413 | INFO     | sum of deviations: 73243266689.99997
[2025-06-05 04:32:15] 2025-06-05 01:10:13,413 | INFO     | mean x: 1749076101.5
[2025-06-05 04:32:15] 2025-06-05 01:10:13,413 | INFO     | mean y: 2467342.5987261147
[2025-06-05 04:32:15] 2025-06-05 01:10:13,413 | INFO     | -- intersect: -13342375028.973501
[2025-06-05 04:32:15] 2025-06-05 01:10:13,414 | INFO     | intersect: -13342375028.973501
[2025-06-05 04:32:15] 2025-06-05 01:10:13,414 | INFO     | chi2: 5.073717096225854
[2025-06-05 04:32:15] 2025-06-05 01:10:13,415 | INFO     | sum of square deviations: 9148487810.0
[2025-06-05 04:32:15] 2025-06-05 01:10:13,418 | INFO     | sum of deviations: 93457354702.0
[2025-06-05 04:32:15] 2025-06-05 01:10:13,418 | INFO     | mean x: 1749075949.0
[2025-06-05 04:32:15] 2025-06-05 01:10:13,418 | INFO     | mean y: 2474078.8187702266
[2025-06-05 04:32:15] 2025-06-05 01:10:13,418 | INFO     | -- intersect: -17865398159.886246
[2025-06-05 04:32:15] 2025-06-05 01:10:13,418 | INFO     | intersect: -17865398159.886246
[2025-06-05 04:32:15] 2025-06-05 01:10:13,419 | INFO     | chi2: 4.276067394706726
[2025-06-05 04:32:15] 2025-06-05 01:10:13,419 | INFO     | current chi2=4.276067394706726 (change=15.721209645537183 %)
[2025-06-05 04:32:15] 2025-06-05 01:10:13,419 | INFO     | right removable region: 308
[2025-06-05 04:32:15] 2025-06-05 01:10:13,435 | INFO     | sum of square deviations: 9148487810.0
[2025-06-05 04:32:15] 2025-06-05 01:10:13,438 | INFO     | sum of deviations: -27185226144.999996
[2025-06-05 04:32:15] 2025-06-05 01:10:13,438 | INFO     | mean x: 1749076254.0
[2025-06-05 04:32:15] 2025-06-05 01:10:13,439 | INFO     | mean y: 2501229.3268608414
[2025-06-05 04:32:15] 2025-06-05 01:10:13,439 | INFO     | -- intersect: 5199975882.77338
[2025-06-05 04:32:15] 2025-06-05 01:10:13,439 | INFO     | intersect: 5199975882.77338
[2025-06-05 04:32:15] 2025-06-05 01:10:13,439 | INFO     | chi2: 1.1798845896111494
[2025-06-05 04:32:15] 2025-06-05 01:10:13,439 | INFO     | current chi2=1.1798845896111494 (change=76.74516400433873 %)
[2025-06-05 04:32:15] 2025-06-05 01:10:13,440 | INFO     | sum of square deviations: 8711530780.0
[2025-06-05 04:32:15] 2025-06-05 01:10:13,443 | INFO     | sum of deviations: -45306994057.5
[2025-06-05 04:32:15] 2025-06-05 01:10:13,443 | INFO     | mean x: 1749076406.5
[2025-06-05 04:32:15] 2025-06-05 01:10:13,443 | INFO     | mean y: 2507509.476973684
[2025-06-05 04:32:15] 2025-06-05 01:10:13,444 | INFO     | -- intersect: 9099117090.11935
[2025-06-05 04:32:15] 2025-06-05 01:10:13,444 | INFO     | intersect: 9099117090.11935
[2025-06-05 04:32:15] 2025-06-05 01:10:13,444 | INFO     | chi2: 0.9691431477589932
[2025-06-05 04:32:15] 2025-06-05 01:10:13,444 | INFO     | current chi2=0.9691431477589932 (change=17.861191145958564 %)
[2025-06-05 04:32:15] 2025-06-05 01:10:13,444 | INFO     | left removable region: 20
[2025-06-05 04:32:15] 2025-06-05 01:10:13,445 | INFO     | sum of square deviations: 7407141672.0
[2025-06-05 04:32:15] 2025-06-05 01:10:13,454 | INFO     | sum of deviations: -7437562219.500001
[2025-06-05 04:32:15] 2025-06-05 01:10:13,466 | INFO     | mean x: 1749076528.5
[2025-06-05 04:32:15] 2025-06-05 01:10:13,467 | INFO     | mean y: 2508862.857638889
[2025-06-05 04:32:15] 2025-06-05 01:10:13,467 | INFO     | -- intersect: 1758768710.912266
[2025-06-05 04:32:15] 2025-06-05 01:10:13,467 | INFO     | intersect: 1758768710.912266
[2025-06-05 04:32:15] 2025-06-05 01:10:13,467 | INFO     | chi2: 0.07162354541765288
[2025-06-05 04:32:15] 2025-06-05 01:10:13,468 | INFO     | -- intersect: 1758768710.912266
[2025-06-05 04:32:15] 2025-06-05 01:10:13,468 | INFO     | current memory leak: -1.00 B/s (using 288 data points, chi2=0.07)
[2025-06-05 04:32:15] 2025-06-05 01:10:13,469 | INFO     | ..............................
[2025-06-05 04:32:15] 2025-06-05 01:10:13,469 | INFO     | . Timing measurements:
[2025-06-05 04:32:15] 2025-06-05 01:10:13,469 | INFO     | . get job = 0 s
[2025-06-05 04:32:15] 2025-06-05 01:10:13,469 | INFO     | . initial setup = 6 s
[2025-06-05 04:32:15] 2025-06-05 01:10:13,469 | INFO     | . payload setup = 157 s
[2025-06-05 04:32:15] 2025-06-05 01:10:13,469 | INFO     | . stage-in = 0 s
[2025-06-05 04:32:15] 2025-06-05 01:10:13,469 | INFO     | . payload execution = 19294 s
[2025-06-05 04:32:15] 2025-06-05 01:10:13,469 | INFO     | . stage-out = 3 s
[2025-06-05 04:32:15] 2025-06-05 01:10:13,469 | INFO     | . log creation = 1 s
[2025-06-05 04:32:15] 2025-06-05 01:10:13,470 | INFO     | ..............................
[2025-06-05 04:32:15] 2025-06-05 01:10:13,617 | INFO     | 
[2025-06-05 04:32:15] 2025-06-05 01:10:13,618 | INFO     | job summary report
[2025-06-05 04:32:15] 2025-06-05 01:10:13,618 | INFO     | --------------------------------------------------
[2025-06-05 04:32:15] 2025-06-05 01:10:13,618 | INFO     | PanDA job id: 6666711139
[2025-06-05 04:32:15] 2025-06-05 01:10:13,618 | INFO     | task id: 44871837
[2025-06-05 04:32:15] 2025-06-05 01:10:13,618 | INFO     | errors: (none)
[2025-06-05 04:32:15] 2025-06-05 01:10:13,618 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:32:15] 2025-06-05 01:10:13,618 | INFO     | pilot state: finished 
[2025-06-05 04:32:15] 2025-06-05 01:10:13,618 | INFO     | transexitcode: 0
[2025-06-05 04:32:15] 2025-06-05 01:10:13,618 | INFO     | exeerrorcode: 0
[2025-06-05 04:32:15] 2025-06-05 01:10:13,618 | INFO     | exeerrordiag: 
[2025-06-05 04:32:15] 2025-06-05 01:10:13,619 | INFO     | exitcode: 0
[2025-06-05 04:32:15] 2025-06-05 01:10:13,619 | INFO     | exitmsg: OK
[2025-06-05 04:32:15] 2025-06-05 01:10:13,619 | INFO     | cpuconsumptiontime: 72879 s
[2025-06-05 04:32:15] 2025-06-05 01:10:13,619 | INFO     | nevents: 400
[2025-06-05 04:32:15] 2025-06-05 01:10:13,619 | INFO     | neventsw: 0
[2025-06-05 04:32:15] 2025-06-05 01:10:13,619 | INFO     | pid: 17878
[2025-06-05 04:32:15] 2025-06-05 01:10:13,619 | INFO     | pgrp: 17878
[2025-06-05 04:32:15] 2025-06-05 01:10:13,619 | INFO     | corecount: 8
[2025-06-05 04:32:15] 2025-06-05 01:10:13,619 | INFO     | event service: False
[2025-06-05 04:32:15] 2025-06-05 01:10:13,619 | INFO     | sizes: {0: 2397166, 1: 2397250, 2: 2397421, 12: 2397449, 23: 2397477, 34: 2397505, 45: 2397661, 55: 2397689, 66: 2397717, 77: 2397745, 88: 2397801, 90: 2398315, 98
[2025-06-05 04:32:15] 2025-06-05 01:10:13,619 | INFO     | --------------------------------------------------
[2025-06-05 04:32:15] 2025-06-05 01:10:13,619 | INFO     | 
[2025-06-05 04:32:15] 2025-06-05 01:10:13,620 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-06-05 04:32:15] 2025-06-05 01:10:14,148 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,148 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:32:15] 2025-06-05 01:10:14,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:32:15] 2025-06-05 01:10:14,150 | INFO     | job 6666711139 has completed (purged errors)
[2025-06-05 04:32:15] 2025-06-05 01:10:14,150 | INFO     | overall cleanup function is called
[2025-06-05 04:32:15] 2025-06-05 01:10:15,159 | INFO     | --- collectZombieJob: --- 10, [17878]
[2025-06-05 04:32:15] 2025-06-05 01:10:15,160 | INFO     | zombie collector waiting for pid 17878
[2025-06-05 04:32:15] 2025-06-05 01:10:15,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:32:15] 2025-06-05 01:10:15,160 | INFO     | collected zombie processes
[2025-06-05 04:32:15] 2025-06-05 01:10:15,160 | INFO     | will attempt to kill all subprocesses of pid=17878
[2025-06-05 04:32:15] 2025-06-05 01:10:15,286 | INFO     | process IDs to be killed: [17878] (in reverse order)
[2025-06-05 04:32:15] 2025-06-05 01:10:16,061 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:32:15] 2025-06-05 01:10:16,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:32:15] 2025-06-05 01:10:16,065 | INFO     | did not find any defunct processes belonging to 17878
[2025-06-05 04:32:15] 2025-06-05 01:10:16,068 | INFO     | did not find any defunct processes belonging to 17878
[2025-06-05 04:32:15] 2025-06-05 01:10:16,069 | INFO     | ready for new job
[2025-06-05 04:32:15] 2025-06-05 01:10:16,069 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:32:15] 2025-06-05 01:10:16,071 | INFO     | **************************************
[2025-06-05 04:32:15] 2025-06-05 01:10:16,071 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:32:15] 2025-06-05 01:10:16,071 | INFO     | **************************************
[2025-06-05 04:32:15] 2025-06-05 01:10:16,071 | INFO     | 
[2025-06-05 04:32:15] 2025-06-05 01:10:16,072 | INFO     | pilot is running in a VM
[2025-06-05 04:32:15] 2025-06-05 01:10:16,072 | INFO     | architecture information:
[2025-06-05 04:32:15] 2025-06-05 01:10:16,078 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:32:15] 2025-06-05 01:10:16,291 | INFO     | cat /etc/os-release:
[2025-06-05 04:32:15] NAME="CentOS Linux"
[2025-06-05 04:32:15] VERSION="7 (Core)"
[2025-06-05 04:32:15] ID="centos"
[2025-06-05 04:32:15] ID_LIKE="rhel fedora"
[2025-06-05 04:32:15] VERSION_ID="7"
[2025-06-05 04:32:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:32:15] ANSI_COLOR="0;31"
[2025-06-05 04:32:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:32:15] HOME_URL="https://www.centos.org/"
[2025-06-05 04:32:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:32:15] 
[2025-06-05 04:32:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:32:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:32:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:32:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:32:15] 
[2025-06-05 04:32:15] 2025-06-05 01:10:16,291 | INFO     | **************************************
[2025-06-05 04:32:15] 2025-06-05 01:10:16,795 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-06-05 04:32:15] 2025-06-05 01:10:17,055 | INFO     | sufficient remaining disk space (497073258496 B)
[2025-06-05 04:32:15] 2025-06-05 01:10:17,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:32:15] 2025-06-05 01:10:17,056 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:32:15] 2025-06-05 01:10:17,056 | INFO     | update_server=False
[2025-06-05 04:32:15] 2025-06-05 01:10:17,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:32:15] 2025-06-05 01:10:17,057 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 04:32:15] 2025-06-05 01:10:17,058 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:32:15] 2025-06-05 01:10:17,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:32:15] 2025-06-05 01:10:17,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:32:15] 2025-06-05 01:10:17,319 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:32:15] 2025-06-05 01:10:17,590 | INFO     | all data control threads have been joined
[2025-06-05 04:32:15] 2025-06-05 01:10:17,613 | INFO     | all payload control threads have been joined
[2025-06-05 04:32:15] 2025-06-05 01:10:17,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:32:15] 2025-06-05 01:10:17,895 | INFO     | aborting loop
[2025-06-05 04:32:15] 2025-06-05 01:10:18,063 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:18,174 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:18,246 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:18,351 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:18,469 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:18,498 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:18,530 | INFO     | [job] validate thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:18,595 | INFO     | [data] control thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:18,620 | INFO     | [payload] control thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:18,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:32:15] 2025-06-05 01:10:18,712 | INFO     | all job control threads have been joined
[2025-06-05 04:32:15] 2025-06-05 01:10:18,874 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:18,901 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:19,326 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:19,620 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:19,640 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:19,718 | INFO     | [job] control thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:19,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:32:15] 2025-06-05 01:10:24,010 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:32:15] 2025-06-05 01:10:24,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458799773504)>', '<ExcThread(monitor, started 140458340624128)>']
[2025-06-05 04:32:15] 2025-06-05 01:10:25,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:32:15] 2025-06-05 01:10:25,105 | INFO     | [monitor] control thread has ended
[2025-06-05 04:32:15] 2025-06-05 01:10:29,927 | INFO     | all workflow threads have been joined
[2025-06-05 04:32:15] 2025-06-05 01:10:29,928 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:32:15] 2025-06-05 01:10:29,928 | INFO     | traces error code: 0
[2025-06-05 04:32:15] 2025-06-05 01:10:29,928 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:32:15] 2025-06-05 01:10:30,419 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:32:15] 2025-06-05 01:10:30,525 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:32:15] 2025-06-05 01:10:30,621 [wrapper] pilotpid: 7163
[2025-06-05 04:32:15] 2025-06-05 01:10:30,724 [wrapper] Pilot exit status: 0
[2025-06-05 04:32:15] 2025-06-05 01:10:31,204 [wrapper] pandaids: 6666711139
[2025-06-05 04:32:15] 2025-06-05 01:10:31,769 [wrapper] cleanup supervisor_pilot  3600 7164
[2025-06-05 04:32:15] 2025-06-05 01:10:31,858 [wrapper] Test setup, not cleaning
[2025-06-05 04:32:15] 2025-06-05 01:10:31,933 [wrapper] apfmon messages muted
[2025-06-05 04:32:15] 2025-06-05 01:10:32,030 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:32:15] 2025-06-05 01:10:32,127 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:32:15]  *** Error codes and diagnostics ***
[2025-06-05 04:32:15]     "exeErrorCode": 0,
[2025-06-05 04:32:15]     "exeErrorDiag": "",
[2025-06-05 04:32:15]     "pilotErrorCode": 0,
[2025-06-05 04:32:15]     "pilotErrorDiag": "",
[2025-06-05 04:32:15]  *** Listing of results directory ***
[2025-06-05 04:32:15] total 422252
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc    495897 May 27 04:15 pilot3.tar.gz
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc      5111 May 27 04:56 queuedata.json
[2025-06-05 04:32:15] -rwx------. 1 boinc boinc     37140 May 27 04:56 runpilot2-wrapper.sh
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc       100 Jun  4 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:32:15] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 21:39 run_atlas
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc       105 Jun  4 21:39 job.xml
[2025-06-05 04:32:15] -rw-r--r--. 2 boinc boinc 226100437 Jun  4 21:39 EVNT.44871834._002411.pool.root.1
[2025-06-05 04:32:15] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:39 start_atlas.sh
[2025-06-05 04:32:15] drwxrwx--x. 2 boinc boinc        68 Jun  4 21:39 shared
[2025-06-05 04:32:15] -rw-r--r--. 2 boinc boinc    508877 Jun  4 21:39 input.tar.gz
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc      6393 Jun  4 21:39 init_data.xml
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc         0 Jun  4 21:39 boinc_lockfile
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc      2559 Jun  4 21:39 pandaJob.out
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc    991007 Jun  4 21:41 agis_schedconf.cvmfs.json
[2025-06-05 04:32:15] drwx------. 4 boinc boinc      4096 Jun  4 21:41 pilot3
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc 198246375 Jun  5 03:07 HITS.44871837._061081.pool.root.1
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc       531 Jun  5 03:07 boinc_task_state.xml
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc      1030 Jun  5 03:08 memory_monitor_summary.json
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc   1598969 Jun  5 03:08 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc    444550 Jun  5 03:08 log.44871837._061081.job.log.tgz.1
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc        95 Jun  5 03:09 pilot_heartbeat.json
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc      7694 Jun  5 03:10 heartbeat.json
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc      4540 Jun  5 03:10 pilotlog.txt
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc   1665447 Jun  5 03:10 log.44871837._061081.job.log.1
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc       357 Jun  5 03:10 output.list
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc       620 Jun  5 03:10 runtime_log
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc   2129920 Jun  5 03:10 result.tar.gz
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc      8673 Jun  5 03:10 runtime_log.err
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc       656 Jun  5 03:10 2AfMDmefzd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHOYKDmqEkZ8n.diag
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc      8192 Jun  5 04:32 boinc_mmap_file
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc        28 Jun  5 04:32 wrapper_checkpoint.txt
[2025-06-05 04:32:15] -rw-r--r--. 1 boinc boinc     20795 Jun  5 04:32 stderr.txt
[2025-06-05 04:32:15] HITS file was successfully produced:
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc 198246375 Jun  5 03:07 shared/HITS.pool.root.1
[2025-06-05 04:32:15]  *** Contents of shared directory: ***
[2025-06-05 04:32:15] total 417000
[2025-06-05 04:32:15] -rw-r--r--. 2 boinc boinc 226100437 Jun  4 21:39 ATLAS.root_0
[2025-06-05 04:32:15] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:39 start_atlas.sh
[2025-06-05 04:32:15] -rw-r--r--. 2 boinc boinc    508877 Jun  4 21:39 input.tar.gz
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc 198246375 Jun  5 03:07 HITS.pool.root.1
[2025-06-05 04:32:15] -rw-------. 1 boinc boinc   2129920 Jun  5 03:10 result.tar.gz
04:32:17 (1909): run_atlas exited; CPU time 73166.600213
04:32:17 (1909): called boinc_finish(0)

</stderr_txt>
]]>

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