Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:19:47 (1925756): wrapper (7.7.26015): starting
07:19:47 (1925756): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:19:47] Arguments: --nthreads 8
[2025-06-04 07:19:47] Threads: 8
[2025-06-04 07:19:47] Checking for CVMFS
[2025-06-04 07:19:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:19:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:19:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:19:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:19:47] 2.12.6.0 9858 31334 549896 146779 0 66 17380558 32935936 10351 16776704 1 143222484 99.675 120318510 23170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:19:47] CVMFS is ok
[2025-06-04 07:19:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:19:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:19:47] Further information can be found at the LHC@home message board.
[2025-06-04 07:19:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:19:47] Checking for apptainer binary...
[2025-06-04 07:19:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:19:47] Running /usr/bin/apptainer --version
[2025-06-04 07:19:47] apptainer version 1.4.1-1.el9
[2025-06-04 07:19:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:19:47] c6-2-11-2.aglt2.org
[2025-06-04 07:19:47] apptainer works
[2025-06-04 07:19:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:19:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:19:47] Starting ATLAS job with PandaID=6678390094
[2025-06-04 07:19:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:17:34]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:17:34]  lfn=log.45006595._054545.job.log.tgz.1
[2025-06-04 08:17:34]  mtime=0
[2025-06-04 08:17:34]  protocol_id=None
[2025-06-04 08:17:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:17:34]  replicas=None
[2025-06-04 08:17:34]  scope=mc23_13p6TeV
[2025-06-04 08:17:34]  status=None
[2025-06-04 08:17:34]  status_code=0
[2025-06-04 08:17:34]  storage_token=
[2025-06-04 08:17:34]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678390094/log.45006595._054545.job.log.tgz.1
[2025-06-04 08:17:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/42/log.45006595._054545.job.log.tgz.1
[2025-06-04 08:17:34]  workdir=None
[2025-06-04 08:17:34] ]
[2025-06-04 08:17:34] 2025-06-04 12:17:07,420 | INFO     | transferring file log.45006595._054545.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678390094/log.45006595._054545.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:17:34] 2025-06-04 12:17:07,420 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678390094/log.45006595._054545.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054545.job
[2025-06-04 08:17:34] 2025-06-04 12:17:07,434 | INFO     | adding to output.list: log.45006595._054545.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/42/log.45006595._054545.job.log.tg
[2025-06-04 08:17:34] 2025-06-04 12:17:07,435 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:17:34] 2025-06-04 12:17:07,435 | INFO     | summary of transferred files:
[2025-06-04 08:17:34] 2025-06-04 12:17:07,435 | INFO     |  -- lfn=log.45006595._054545.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:17:34] 2025-06-04 12:17:07,435 | INFO     | stage-out finished correctly
[2025-06-04 08:17:34] 2025-06-04 12:17:07,792 | INFO     | monitor loop #256: job 0:6678390094 is in state 'finished'
[2025-06-04 08:17:34] 2025-06-04 12:17:07,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:17:34] 2025-06-04 12:17:09,435 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:17:34] 2025-06-04 12:17:09,810 | INFO     | 3436s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 08:17:34] 2025-06-04 12:17:10,293 | INFO     | monitor loop #257: job 0:6678390094 is in state 'finished'
[2025-06-04 08:17:34] 2025-06-04 12:17:10,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:17:34] 2025-06-04 12:17:10,905 | INFO     | job 6678390094 has state=finished
[2025-06-04 08:17:34] 2025-06-04 12:17:10,905 | INFO     | preparing for final server update for job 6678390094 in state='finished'
[2025-06-04 08:17:34] 2025-06-04 12:17:10,905 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:17:34] 2025-06-04 12:17:10,905 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:17:34] 2025-06-04 12:17:10,905 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:17:34] 2025-06-04 12:17:10,906 | INFO     | job 6678390094 has finished - writing final server update
[2025-06-04 08:17:34] 2025-06-04 12:17:10,906 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:17:34] 2025-06-04 12:17:10,923 | INFO     | executing command: lscpu
[2025-06-04 08:17:34] 2025-06-04 12:17:10,994 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:17:34] 2025-06-04 12:17:12,796 | INFO     | monitor loop #258: job 0:6678390094 is in state 'finished'
[2025-06-04 08:17:34] 2025-06-04 12:17:12,796 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:17:34] 2025-06-04 12:17:13,742 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:17:34] 2025-06-04 12:17:13,742 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678390094/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:17:34] 2025-06-04 12:17:13,742 | INFO     | extracted standard info from prmon json
[2025-06-04 08:17:34] 2025-06-04 12:17:13,742 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:17:34] 2025-06-04 12:17:13,743 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:17:34] 2025-06-04 12:17:13,743 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:17:34] 2025-06-04 12:17:13,743 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:17:34] 2025-06-04 12:17:13,744 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:17:34] 2025-06-04 12:17:13,744 | INFO     | sum of square deviations: 36465800.0
[2025-06-04 08:17:34] 2025-06-04 12:17:13,744 | INFO     | sum of deviations: 3281259418.000001
[2025-06-04 08:17:34] 2025-06-04 12:17:13,744 | INFO     | mean x: 1749037787.0
[2025-06-04 08:17:34] 2025-06-04 12:17:13,744 | INFO     | mean y: 2403218.8571428573
[2025-06-04 08:17:34] 2025-06-04 12:17:13,744 | INFO     | -- intersect: -157379217670.6237
[2025-06-04 08:17:34] 2025-06-04 12:17:13,744 | INFO     | intersect: -157379217670.6237
[2025-06-04 08:17:34] 2025-06-04 12:17:13,744 | INFO     | chi2: 0.6621158021921566
[2025-06-04 08:17:34] 2025-06-04 12:17:13,744 | INFO     | -- intersect: -157379217670.6237
[2025-06-04 08:17:34] 2025-06-04 12:17:13,744 | INFO     | current memory leak: 89.98 B/s (using 49 data points, chi2=0.66)
[2025-06-04 08:17:34] 2025-06-04 12:17:13,745 | INFO     | ..............................
[2025-06-04 08:17:34] 2025-06-04 12:17:13,745 | INFO     | . Timing measurements:
[2025-06-04 08:17:34] 2025-06-04 12:17:13,745 | INFO     | . get job = 0 s
[2025-06-04 08:17:34] 2025-06-04 12:17:13,745 | INFO     | . initial setup = 2 s
[2025-06-04 08:17:34] 2025-06-04 12:17:13,745 | INFO     | . payload setup = 4 s
[2025-06-04 08:17:34] 2025-06-04 12:17:13,745 | INFO     | . stage-in = 0 s
[2025-06-04 08:17:34] 2025-06-04 12:17:13,745 | INFO     | . payload execution = 3408 s
[2025-06-04 08:17:34] 2025-06-04 12:17:13,745 | INFO     | . stage-out = 0 s
[2025-06-04 08:17:34] 2025-06-04 12:17:13,745 | INFO     | . log creation = 0 s
[2025-06-04 08:17:34] 2025-06-04 12:17:13,745 | INFO     | ..............................
[2025-06-04 08:17:34] 2025-06-04 12:17:14,126 | INFO     | 
[2025-06-04 08:17:34] 2025-06-04 12:17:14,126 | INFO     | job summary report
[2025-06-04 08:17:34] 2025-06-04 12:17:14,126 | INFO     | --------------------------------------------------
[2025-06-04 08:17:34] 2025-06-04 12:17:14,126 | INFO     | PanDA job id: 6678390094
[2025-06-04 08:17:34] 2025-06-04 12:17:14,126 | INFO     | task id: 45006595
[2025-06-04 08:17:34] 2025-06-04 12:17:14,126 | INFO     | errors: (none)
[2025-06-04 08:17:34] 2025-06-04 12:17:14,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:17:34] 2025-06-04 12:17:14,126 | INFO     | pilot state: finished 
[2025-06-04 08:17:34] 2025-06-04 12:17:14,126 | INFO     | transexitcode: 0
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | exeerrorcode: 0
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | exeerrordiag: 
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | exitcode: 0
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | exitmsg: OK
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | cpuconsumptiontime: 22659 s
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | nevents: 400
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | neventsw: 0
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | pid: 1936589
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | pgrp: 1936589
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | corecount: 8
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | event service: False
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | sizes: {0: 2404895, 1: 2405150, 3: 2405356, 11: 2405384, 3416: 2430951, 3417: 2430950, 3418: 2440075, 3420: 2440131, 3424: 2440301}
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | --------------------------------------------------
[2025-06-04 08:17:34] 2025-06-04 12:17:14,127 | INFO     | 
[2025-06-04 08:17:34] 2025-06-04 12:17:14,128 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:17:34] 2025-06-04 12:17:14,144 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,144 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,144 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,144 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,144 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,144 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,144 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,144 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,144 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,145 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:17:34] 2025-06-04 12:17:14,145 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,145 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:17:34] 2025-06-04 12:17:14,145 | INFO     | job 6678390094 has completed (purged errors)
[2025-06-04 08:17:34] 2025-06-04 12:17:14,145 | INFO     | overall cleanup function is called
[2025-06-04 08:17:34] 2025-06-04 12:17:15,133 | INFO     | PID=1929377 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 08:17:34] 2025-06-04 12:17:15,133 | INFO     | .. there are 14 such processes running
[2025-06-04 08:17:34] 2025-06-04 12:17:15,153 | INFO     | --- collectZombieJob: --- 10, [1936589]
[2025-06-04 08:17:34] 2025-06-04 12:17:15,153 | INFO     | zombie collector waiting for pid 1936589
[2025-06-04 08:17:34] 2025-06-04 12:17:15,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:17:34] 2025-06-04 12:17:15,153 | INFO     | collected zombie processes
[2025-06-04 08:17:34] 2025-06-04 12:17:15,153 | INFO     | will attempt to kill all subprocesses of pid=1936589
[2025-06-04 08:17:34] 2025-06-04 12:17:15,457 | INFO     | process IDs to be killed: [1936589] (in reverse order)
[2025-06-04 08:17:34] 2025-06-04 12:17:15,520 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:17:34] 2025-06-04 12:17:15,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:17:34] 2025-06-04 12:17:15,529 | INFO     | did not find any defunct processes belonging to 1936589
[2025-06-04 08:17:34] 2025-06-04 12:17:15,536 | INFO     | did not find any defunct processes belonging to 1936589
[2025-06-04 08:17:34] 2025-06-04 12:17:15,536 | INFO     | ready for new job
[2025-06-04 08:17:34] 2025-06-04 12:17:15,536 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:17:34] 2025-06-04 12:17:15,537 | INFO     | **************************************
[2025-06-04 08:17:34] 2025-06-04 12:17:15,538 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:17:34] 2025-06-04 12:17:15,538 | INFO     | **************************************
[2025-06-04 08:17:34] 2025-06-04 12:17:15,538 | INFO     | 
[2025-06-04 08:17:34] 2025-06-04 12:17:15,555 | INFO     | architecture information:
[2025-06-04 08:17:34] 2025-06-04 12:17:15,555 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:17:34] 2025-06-04 12:17:15,566 | INFO     | cat /etc/os-release:
[2025-06-04 08:17:34] NAME="CentOS Linux"
[2025-06-04 08:17:34] VERSION="7 (Core)"
[2025-06-04 08:17:34] ID="centos"
[2025-06-04 08:17:34] ID_LIKE="rhel fedora"
[2025-06-04 08:17:34] VERSION_ID="7"
[2025-06-04 08:17:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:17:34] ANSI_COLOR="0;31"
[2025-06-04 08:17:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:17:34] HOME_URL="https://www.centos.org/"
[2025-06-04 08:17:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:17:34] 
[2025-06-04 08:17:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:17:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:17:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:17:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:17:34] 
[2025-06-04 08:17:34] 2025-06-04 12:17:15,566 | INFO     | **************************************
[2025-06-04 08:17:34] 2025-06-04 12:17:16,069 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:17:34] 2025-06-04 12:17:16,080 | INFO     | sufficient remaining disk space (95729745920 B)
[2025-06-04 08:17:34] 2025-06-04 12:17:16,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:17:34] 2025-06-04 12:17:16,081 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:17:34] 2025-06-04 12:17:16,081 | INFO     | update_server=False
[2025-06-04 08:17:34] 2025-06-04 12:17:16,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:17:34] 2025-06-04 12:17:16,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:17:34] 2025-06-04 12:17:16,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:17:34] 2025-06-04 12:17:16,082 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:17:34] 2025-06-04 12:17:16,082 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:17:34] 2025-06-04 12:17:16,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:17:34] 2025-06-04 12:17:16,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:17:34] 2025-06-04 12:17:16,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:17:34] 2025-06-04 12:17:16,302 | INFO     | aborting loop
[2025-06-04 08:17:34] 2025-06-04 12:17:16,437 | INFO     | all payload control threads have been joined
[2025-06-04 08:17:34] 2025-06-04 12:17:16,733 | INFO     | all job control threads have been joined
[2025-06-04 08:17:34] 2025-06-04 12:17:17,045 | INFO     | all data control threads have been joined
[2025-06-04 08:17:34] 2025-06-04 12:17:17,086 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:17,307 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:17,399 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:17,442 | INFO     | [payload] control thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:17,739 | INFO     | [job] control thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:17,778 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:18,015 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:18,050 | INFO     | [data] control thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:18,087 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:18,162 | INFO     | [job] validate thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:18,413 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:18,425 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:18,429 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:18,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:17:34] 2025-06-04 12:17:19,810 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:20,088 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:26,974 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:17:34] 2025-06-04 12:17:27,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:17:34] 2025-06-04 12:17:29,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643679164224)>', '<ExcThread(monitor, started 139643177645824)>']
[2025-06-04 08:17:34] 2025-06-04 12:17:29,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:17:34] 2025-06-04 12:17:29,148 | INFO     | [monitor] control thread has ended
[2025-06-04 08:17:34] 2025-06-04 12:17:34,161 | INFO     | all workflow threads have been joined
[2025-06-04 08:17:34] 2025-06-04 12:17:34,161 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:17:34] 2025-06-04 12:17:34,161 | INFO     | traces error code: 0
[2025-06-04 08:17:34] 2025-06-04 12:17:34,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:17:34] 2025-06-04 12:17:34,282 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:17:34] 2025-06-04 12:17:34,285 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:17:34] 2025-06-04 12:17:34,287 [wrapper] pilotpid: 1929377
[2025-06-04 08:17:34] 2025-06-04 12:17:34,289 [wrapper] Pilot exit status: 0
[2025-06-04 08:17:34] 2025-06-04 12:17:34,298 [wrapper] pandaids: 6678390094
[2025-06-04 08:17:34] 2025-06-04 12:17:34,361 [wrapper] cleanup supervisor_pilot 2042366 1929378
[2025-06-04 08:17:34] 2025-06-04 12:17:34,364 [wrapper] Test setup, not cleaning
[2025-06-04 08:17:34] 2025-06-04 12:17:34,367 [wrapper] apfmon messages muted
[2025-06-04 08:17:34] 2025-06-04 12:17:34,369 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:17:34] 2025-06-04 12:17:34,371 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:17:34]  *** Error codes and diagnostics ***
[2025-06-04 08:17:34]     "exeErrorCode": 0,
[2025-06-04 08:17:34]     "exeErrorDiag": "",
[2025-06-04 08:17:34]     "pilotErrorCode": 0,
[2025-06-04 08:17:34]     "pilotErrorDiag": "",
[2025-06-04 08:17:34]  *** Listing of results directory ***
[2025-06-04 08:17:34] total 389704
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:35 queuedata.json
[2025-06-04 08:17:34] -rwx------. 1 boincer umatlas     37140 Jun  4 02:37 runpilot2-wrapper.sh
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:17:34] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:19 run_atlas
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:19 job.xml
[2025-06-04 08:17:34] -rw-r--r--. 2 boincer umatlas 215978505 Jun  4 07:19 EVNT.45006593._000348.pool.root.1
[2025-06-04 08:17:34] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:19 start_atlas.sh
[2025-06-04 08:17:34] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:19 shared
[2025-06-04 08:17:34] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 07:19 input.tar.gz
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:19 boinc_lockfile
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas      2519 Jun  4 07:19 pandaJob.out
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas    986812 Jun  4 07:19 agis_schedconf.cvmfs.json
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas   1603667 Jun  4 07:19 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:17:34] drwx------. 4 boincer umatlas      4096 Jun  4 07:19 pilot3
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas      6856 Jun  4 08:13 init_data.xml
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas 177989999 Jun  4 08:16 HITS.45006595._054545.pool.root.1
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:16 boinc_task_state.xml
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas      1036 Jun  4 08:17 memory_monitor_summary.json
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas        95 Jun  4 08:17 pilot_heartbeat.json
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas    276387 Jun  4 08:17 log.45006595._054545.job.log.tgz.1
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas      7712 Jun  4 08:17 heartbeat.json
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:17 wrapper_checkpoint.txt
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:17 boinc_mmap_file
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas      4548 Jun  4 08:17 pilotlog.txt
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas    349845 Jun  4 08:17 log.45006595._054545.job.log.1
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas       357 Jun  4 08:17 output.list
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:17 runtime_log
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas    645120 Jun  4 08:17 result.tar.gz
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas       651 Jun  4 08:17 ypiMDmxvwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCtaKDm3JjlOm.diag
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 08:17 runtime_log.err
[2025-06-04 08:17:34] -rw-r--r--. 1 boincer umatlas     21689 Jun  4 08:17 stderr.txt
[2025-06-04 08:17:34] HITS file was successfully produced:
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas 177989999 Jun  4 08:16 shared/HITS.pool.root.1
[2025-06-04 08:17:34]  *** Contents of shared directory: ***
[2025-06-04 08:17:34] total 385892
[2025-06-04 08:17:34] -rw-r--r--. 2 boincer umatlas 215978505 Jun  4 07:19 ATLAS.root_0
[2025-06-04 08:17:34] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:19 start_atlas.sh
[2025-06-04 08:17:34] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 07:19 input.tar.gz
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas 177989999 Jun  4 08:16 HITS.pool.root.1
[2025-06-04 08:17:34] -rw-------. 1 boincer umatlas    645120 Jun  4 08:17 result.tar.gz
08:17:35 (1925756): run_atlas exited; CPU time 22781.760236
08:17:35 (1925756): called boinc_finish(0)

</stderr_txt>
]]>

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