Name p11MDmyowg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFWnKDm4rcQDm_1
Workunit 232846283
Created 4 Jun 2025, 9:22:48 UTC
Sent 4 Jun 2025, 11:24:28 UTC
Report deadline 12 Jun 2025, 11:24:28 UTC
Received 4 Jun 2025, 12:28:54 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10856792
Run time 53 min 36 sec
CPU time 5 hours 53 min 1 sec
Validate state Valid
Credit 194.80
Device peak FLOPS 27.77 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.66 GB
Peak swap size 3.00 GB
Peak disk usage 586.60 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:24:43 (2938578): wrapper (7.7.26015): starting
07:24:43 (2938578): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:24:43] Arguments: --nthreads 8
[2025-06-04 07:24:43] Threads: 8
[2025-06-04 07:24:43] Checking for CVMFS
[2025-06-04 07:24:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:24:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:24:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:24:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:24:44] 2.12.6.0 6829 1274 156488 146779 3 66 26056679 32935936 10137 16776704 0 18123709 99.891 3463136 33227 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:24:44] CVMFS is ok
[2025-06-04 07:24:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:24:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:24:44] Further information can be found at the LHC@home message board.
[2025-06-04 07:24:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:24:44] Checking for apptainer binary...
[2025-06-04 07:24:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:24:44] Running /usr/bin/apptainer --version
[2025-06-04 07:24:44] apptainer version 1.4.1-1.el9
[2025-06-04 07:24:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:24:44] c6-8-25-3.aglt2.org
[2025-06-04 07:24:44] apptainer works
[2025-06-04 07:24:44] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:24:44] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:24:44] Starting ATLAS job with PandaID=6678364717
[2025-06-04 07:24:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:19:17]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:19:17] ]
[2025-06-04 08:19:17] 2025-06-04 12:18:56,371 | INFO     | transferring file log.45006595._054201.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678364717/log.45006595._054201.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:19:17] 2025-06-04 12:18:56,372 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678364717/log.45006595._054201.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054201.job
[2025-06-04 08:19:17] 2025-06-04 12:18:56,387 | INFO     | adding to output.list: log.45006595._054201.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/e7/log.45006595._054201.job.log.tg
[2025-06-04 08:19:17] 2025-06-04 12:18:56,388 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:19:17] 2025-06-04 12:18:56,388 | INFO     | summary of transferred files:
[2025-06-04 08:19:17] 2025-06-04 12:18:56,388 | INFO     |  -- lfn=log.45006595._054201.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:19:17] 2025-06-04 12:18:56,388 | INFO     | stage-out finished correctly
[2025-06-04 08:19:17] 2025-06-04 12:18:58,792 | WARNING  | process 2949339 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:19:17] 2025-06-04 12:18:58,793 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678364717/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:19:17] 2025-06-04 12:18:58,793 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678364717/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:19:17] 2025-06-04 12:18:58,794 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3497506 B
[2025-06-04 08:19:17] 2025-06-04 12:18:58,794 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15544 B
[2025-06-04 08:19:17] 2025-06-04 12:18:58,794 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:19:17] 2025-06-04 12:18:58,809 | INFO     | sufficient remaining disk space (75795267584 B)
[2025-06-04 08:19:17] 2025-06-04 12:18:58,809 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 08:19:17] 2025-06-04 12:18:58,810 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6678364717: 3786760 B (within 2537553920 B limit)
[2025-06-04 08:19:17] 2025-06-04 12:18:58,810 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6678364717/HITS.45006595._054201.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 08:19:17] 2025-06-04 12:18:58,810 | INFO     | total size of present files: 0 B (workdir size: 3786760 B)
[2025-06-04 08:19:17] 2025-06-04 12:18:58,811 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678364717/HITS.45006595._054201.pool.root.1 since it does not exist
[2025-06-04 08:19:17] 2025-06-04 12:18:59,137 | INFO     | number of running child processes to parent process 2949339: 1
[2025-06-04 08:19:17] 2025-06-04 12:18:59,137 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:19:17] 2025-06-04 12:18:59,642 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:19:17] 2025-06-04 12:19:01,640 | INFO     | monitor loop #243: job 0:6678364717 is in state 'finished'
[2025-06-04 08:19:17] 2025-06-04 12:19:01,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:19:17] 2025-06-04 12:19:01,749 | INFO     | job 6678364717 has state=finished
[2025-06-04 08:19:17] 2025-06-04 12:19:01,749 | INFO     | preparing for final server update for job 6678364717 in state='finished'
[2025-06-04 08:19:17] 2025-06-04 12:19:01,750 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:19:17] 2025-06-04 12:19:01,750 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:19:17] 2025-06-04 12:19:01,750 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:19:17] 2025-06-04 12:19:01,751 | INFO     | job 6678364717 has finished - writing final server update
[2025-06-04 08:19:17] 2025-06-04 12:19:01,751 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:19:17] 2025-06-04 12:19:01,770 | INFO     | executing command: lscpu
[2025-06-04 08:19:17] 2025-06-04 12:19:01,808 | INFO     | PID=2942190 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 08:19:17] 2025-06-04 12:19:01,808 | INFO     | .. there are 15 such processes running
[2025-06-04 08:19:17] 2025-06-04 12:19:01,857 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:19:17] 2025-06-04 12:19:04,144 | INFO     | monitor loop #244: job 0:6678364717 is in state 'finished'
[2025-06-04 08:19:17] 2025-06-04 12:19:04,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:19:17] 2025-06-04 12:19:04,589 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:19:17] 2025-06-04 12:19:04,590 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678364717/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:19:17] 2025-06-04 12:19:04,590 | INFO     | extracted standard info from prmon json
[2025-06-04 08:19:17] 2025-06-04 12:19:04,590 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:19:17] 2025-06-04 12:19:04,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:19:17] 2025-06-04 12:19:04,591 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:19:17] 2025-06-04 12:19:04,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:19:17] 2025-06-04 12:19:04,592 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:19:17] 2025-06-04 12:19:04,592 | INFO     | sum of square deviations: 30168007.5
[2025-06-04 08:19:17] 2025-06-04 12:19:04,592 | INFO     | sum of deviations: 3017056584.0
[2025-06-04 08:19:17] 2025-06-04 12:19:04,592 | INFO     | mean x: 1749037989.5
[2025-06-04 08:19:17] 2025-06-04 12:19:04,592 | INFO     | mean y: 2323193.8695652173
[2025-06-04 08:19:17] 2025-06-04 12:19:04,592 | INFO     | -- intersect: -174916308137.2549
[2025-06-04 08:19:17] 2025-06-04 12:19:04,592 | INFO     | intersect: -174916308137.2549
[2025-06-04 08:19:17] 2025-06-04 12:19:04,592 | INFO     | chi2: 0.6420040757303966
[2025-06-04 08:19:17] 2025-06-04 12:19:04,592 | INFO     | -- intersect: -174916308137.2549
[2025-06-04 08:19:17] 2025-06-04 12:19:04,592 | INFO     | current memory leak: 100.01 B/s (using 46 data points, chi2=0.64)
[2025-06-04 08:19:17] 2025-06-04 12:19:04,593 | INFO     | ..............................
[2025-06-04 08:19:17] 2025-06-04 12:19:04,593 | INFO     | . Timing measurements:
[2025-06-04 08:19:17] 2025-06-04 12:19:04,593 | INFO     | . get job = 0 s
[2025-06-04 08:19:17] 2025-06-04 12:19:04,593 | INFO     | . initial setup = 2 s
[2025-06-04 08:19:17] 2025-06-04 12:19:04,593 | INFO     | . payload setup = 4 s
[2025-06-04 08:19:17] 2025-06-04 12:19:04,593 | INFO     | . stage-in = 0 s
[2025-06-04 08:19:17] 2025-06-04 12:19:04,593 | INFO     | . payload execution = 3223 s
[2025-06-04 08:19:17] 2025-06-04 12:19:04,593 | INFO     | . stage-out = 0 s
[2025-06-04 08:19:17] 2025-06-04 12:19:04,593 | INFO     | . log creation = 0 s
[2025-06-04 08:19:17] 2025-06-04 12:19:04,593 | INFO     | ..............................
[2025-06-04 08:19:17] 2025-06-04 12:19:04,641 | INFO     | 
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | job summary report
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | --------------------------------------------------
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | PanDA job id: 6678364717
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | task id: 45006595
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | errors: (none)
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | pilot state: finished 
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | transexitcode: 0
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | exeerrorcode: 0
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | exeerrordiag: 
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | exitcode: 0
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | exitmsg: OK
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | cpuconsumptiontime: 21027 s
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | nevents: 400
[2025-06-04 08:19:17] 2025-06-04 12:19:04,642 | INFO     | neventsw: 0
[2025-06-04 08:19:17] 2025-06-04 12:19:04,643 | INFO     | pid: 2949339
[2025-06-04 08:19:17] 2025-06-04 12:19:04,643 | INFO     | pgrp: 2949339
[2025-06-04 08:19:17] 2025-06-04 12:19:04,643 | INFO     | corecount: 8
[2025-06-04 08:19:17] 2025-06-04 12:19:04,643 | INFO     | event service: False
[2025-06-04 08:19:17] 2025-06-04 12:19:04,643 | INFO     | sizes: {0: 2404356, 1: 2405212, 4: 2405418, 12: 2405446, 3231: 2430862, 3232: 2439803, 3235: 2440015, 3240: 2440185}
[2025-06-04 08:19:17] 2025-06-04 12:19:04,643 | INFO     | --------------------------------------------------
[2025-06-04 08:19:17] 2025-06-04 12:19:04,643 | INFO     | 
[2025-06-04 08:19:17] 2025-06-04 12:19:04,643 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:19:17] 2025-06-04 12:19:04,660 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,660 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,660 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,662 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:19:17] 2025-06-04 12:19:04,662 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,662 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:19:17] 2025-06-04 12:19:04,662 | INFO     | job 6678364717 has completed (purged errors)
[2025-06-04 08:19:17] 2025-06-04 12:19:04,662 | INFO     | overall cleanup function is called
[2025-06-04 08:19:17] 2025-06-04 12:19:05,670 | INFO     | --- collectZombieJob: --- 10, [2949339]
[2025-06-04 08:19:17] 2025-06-04 12:19:05,670 | INFO     | zombie collector waiting for pid 2949339
[2025-06-04 08:19:17] 2025-06-04 12:19:05,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:19:17] 2025-06-04 12:19:05,671 | INFO     | collected zombie processes
[2025-06-04 08:19:17] 2025-06-04 12:19:05,671 | INFO     | will attempt to kill all subprocesses of pid=2949339
[2025-06-04 08:19:17] 2025-06-04 12:19:05,847 | INFO     | process IDs to be killed: [2949339] (in reverse order)
[2025-06-04 08:19:17] 2025-06-04 12:19:05,906 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:19:17] 2025-06-04 12:19:05,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:19:17] 2025-06-04 12:19:05,914 | INFO     | did not find any defunct processes belonging to 2949339
[2025-06-04 08:19:17] 2025-06-04 12:19:05,921 | INFO     | did not find any defunct processes belonging to 2949339
[2025-06-04 08:19:17] 2025-06-04 12:19:05,921 | INFO     | ready for new job
[2025-06-04 08:19:17] 2025-06-04 12:19:05,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:19:17] 2025-06-04 12:19:05,923 | INFO     | **************************************
[2025-06-04 08:19:17] 2025-06-04 12:19:05,923 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:19:17] 2025-06-04 12:19:05,923 | INFO     | **************************************
[2025-06-04 08:19:17] 2025-06-04 12:19:05,923 | INFO     | 
[2025-06-04 08:19:17] 2025-06-04 12:19:05,937 | INFO     | architecture information:
[2025-06-04 08:19:17] 2025-06-04 12:19:05,937 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:19:17] 2025-06-04 12:19:05,947 | INFO     | cat /etc/os-release:
[2025-06-04 08:19:17] NAME="CentOS Linux"
[2025-06-04 08:19:17] VERSION="7 (Core)"
[2025-06-04 08:19:17] ID="centos"
[2025-06-04 08:19:17] ID_LIKE="rhel fedora"
[2025-06-04 08:19:17] VERSION_ID="7"
[2025-06-04 08:19:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:19:17] ANSI_COLOR="0;31"
[2025-06-04 08:19:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:19:17] HOME_URL="https://www.centos.org/"
[2025-06-04 08:19:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:19:17] 
[2025-06-04 08:19:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:19:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:19:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:19:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:19:17] 
[2025-06-04 08:19:17] 2025-06-04 12:19:05,947 | INFO     | **************************************
[2025-06-04 08:19:17] 2025-06-04 12:19:06,449 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:19:17] 2025-06-04 12:19:06,460 | INFO     | sufficient remaining disk space (75798413312 B)
[2025-06-04 08:19:17] 2025-06-04 12:19:06,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:19:17] 2025-06-04 12:19:06,460 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:19:17] 2025-06-04 12:19:06,460 | INFO     | update_server=False
[2025-06-04 08:19:17] 2025-06-04 12:19:06,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:19:17] 2025-06-04 12:19:06,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:19:17] 2025-06-04 12:19:06,460 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:19:17] 2025-06-04 12:19:06,460 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:19:17] 2025-06-04 12:19:06,461 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:19:17] 2025-06-04 12:19:06,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:19:17] 2025-06-04 12:19:06,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:19:17] 2025-06-04 12:19:06,647 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:19:17] 2025-06-04 12:19:06,648 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:19:17] 2025-06-04 12:19:06,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:19:17] 2025-06-04 12:19:06,648 | INFO     | will abort loop
[2025-06-04 08:19:17] 2025-06-04 12:19:06,905 | INFO     | all data control threads have been joined
[2025-06-04 08:19:17] 2025-06-04 12:19:06,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:19:17] 2025-06-04 12:19:07,019 | INFO     | all job control threads have been joined
[2025-06-04 08:19:17] 2025-06-04 12:19:07,188 | INFO     | all payload control threads have been joined
[2025-06-04 08:19:17] 2025-06-04 12:19:07,464 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:07,466 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:07,629 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:07,653 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:07,898 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:07,911 | INFO     | [data] control thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:08,024 | INFO     | [job] control thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:08,193 | INFO     | [payload] control thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:08,255 | INFO     | [job] validate thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:08,458 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:08,463 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:08,591 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:08,661 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:08,849 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:08,991 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:10,462 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:19:17] 2025-06-04 12:19:11,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440114702144)>', '<ExcThread(monitor, started 140439617251072)>']
[2025-06-04 08:19:17] 2025-06-04 12:19:12,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:19:17] 2025-06-04 12:19:12,483 | INFO     | [monitor] control thread has ended
[2025-06-04 08:19:17] 2025-06-04 12:19:16,873 | INFO     | all workflow threads have been joined
[2025-06-04 08:19:17] 2025-06-04 12:19:16,873 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:19:17] 2025-06-04 12:19:16,874 | INFO     | traces error code: 0
[2025-06-04 08:19:17] 2025-06-04 12:19:16,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:19:17] 2025-06-04 12:19:16,992 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:19:17] 2025-06-04 12:19:16,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:19:17] 2025-06-04 12:19:16,996 [wrapper] pilotpid: 2942190
[2025-06-04 08:19:17] 2025-06-04 12:19:16,998 [wrapper] Pilot exit status: 0
[2025-06-04 08:19:17] 2025-06-04 12:19:17,007 [wrapper] pandaids: 6678364717
[2025-06-04 08:19:17] 2025-06-04 12:19:17,069 [wrapper] cleanup supervisor_pilot 3144695 2942191
[2025-06-04 08:19:17] 2025-06-04 12:19:17,070 [wrapper] Test setup, not cleaning
[2025-06-04 08:19:17] 2025-06-04 12:19:17,072 [wrapper] apfmon messages muted
[2025-06-04 08:19:17] 2025-06-04 12:19:17,073 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:19:17] 2025-06-04 12:19:17,075 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:19:17]  *** Error codes and diagnostics ***
[2025-06-04 08:19:17]     "exeErrorCode": 0,
[2025-06-04 08:19:17]     "exeErrorDiag": "",
[2025-06-04 08:19:17]     "pilotErrorCode": 0,
[2025-06-04 08:19:17]     "pilotErrorDiag": "",
[2025-06-04 08:19:17]  *** Listing of results directory ***
[2025-06-04 08:19:17] total 389684
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:29 queuedata.json
[2025-06-04 08:19:17] -rwx------. 1 boincer umatlas     37140 Jun  4 02:30 runpilot2-wrapper.sh
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:19:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:24 run_atlas
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:24 job.xml
[2025-06-04 08:19:17] -rw-r--r--. 2 boincer umatlas 213479454 Jun  4 07:24 EVNT.45006593._002169.pool.root.1
[2025-06-04 08:19:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:24 start_atlas.sh
[2025-06-04 08:19:17] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:24 shared
[2025-06-04 08:19:17] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 07:24 input.tar.gz
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:24 boinc_lockfile
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:24 pandaJob.out
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas    986812 Jun  4 07:24 agis_schedconf.cvmfs.json
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas   1603667 Jun  4 07:24 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:19:17] drwx------. 4 boincer umatlas      4096 Jun  4 07:24 pilot3
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas      6856 Jun  4 08:12 init_data.xml
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas 180445966 Jun  4 08:18 HITS.45006595._054201.pool.root.1
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:18 boinc_task_state.xml
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas        95 Jun  4 08:18 pilot_heartbeat.json
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas      1039 Jun  4 08:18 memory_monitor_summary.json
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas    294919 Jun  4 08:18 log.45006595._054201.job.log.tgz.1
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas      7724 Jun  4 08:19 heartbeat.json
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:19 boinc_mmap_file
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:19 wrapper_checkpoint.txt
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas      4662 Jun  4 08:19 pilotlog.txt
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas    336955 Jun  4 08:19 log.45006595._054201.job.log.1
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas       357 Jun  4 08:19 output.list
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:19 runtime_log
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas    655360 Jun  4 08:19 result.tar.gz
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 08:19 runtime_log.err
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas       651 Jun  4 08:19 p11MDmyowg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFWnKDm4rcQDm.diag
[2025-06-04 08:19:17] -rw-r--r--. 1 boincer umatlas     22674 Jun  4 08:19 stderr.txt
[2025-06-04 08:19:17] HITS file was successfully produced:
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas 180445966 Jun  4 08:18 shared/HITS.pool.root.1
[2025-06-04 08:19:17]  *** Contents of shared directory: ***
[2025-06-04 08:19:17] total 385864
[2025-06-04 08:19:17] -rw-r--r--. 2 boincer umatlas 213479454 Jun  4 07:24 ATLAS.root_0
[2025-06-04 08:19:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:24 start_atlas.sh
[2025-06-04 08:19:17] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 07:24 input.tar.gz
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas 180445966 Jun  4 08:18 HITS.pool.root.1
[2025-06-04 08:19:17] -rw-------. 1 boincer umatlas    655360 Jun  4 08:19 result.tar.gz
08:19:18 (2938578): run_atlas exited; CPU time 21125.434645
08:19:18 (2938578): called boinc_finish(0)

</stderr_txt>
]]>


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