Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:22:53 (499842): wrapper (7.7.26015): starting
17:22:53 (499842): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 17:22:53] Arguments: --nthreads 12
[2025-06-04 17:22:53] Threads: 12
[2025-06-04 17:22:53] Checking for CVMFS
[2025-06-04 17:22:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:22:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:22:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:22:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:22:53] 2.12.7.0 3387806 2625 87600 146786 2 55 3432196 4097025 0 130560 0 2935871 99.993 675274 7098 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-04 17:22:53] CVMFS is ok
[2025-06-04 17:22:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:22:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:22:53] Further information can be found at the LHC@home message board.
[2025-06-04 17:22:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:22:53] Checking for apptainer binary...
[2025-06-04 17:22:53] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-04 17:22:53] apptainer is not installed, using version from CVMFS
[2025-06-04 17:22:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:22:53] pckelar5.cern.ch
[2025-06-04 17:22:53] apptainer works
[2025-06-04 17:22:53] Set ATHENA_PROC_NUMBER=12
[2025-06-04 17:22:53] Set ATHENA_CORE_NUMBER=12
[2025-06-04 17:22:53] Starting ATLAS job with PandaID=6678364632
[2025-06-04 17:22:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:27:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:27:27]  filesize=349909
[2025-06-04 18:27:27]  filetype=log
[2025-06-04 18:27:27]  guid=7fafa4ac-c708-4f96-9c7b-9f47d9e44702
[2025-06-04 18:27:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 18:27:27]  is_altstaged=None
[2025-06-04 18:27:27]  is_tar=False
[2025-06-04 18:27:27]  lfn=log.45006595._054116.job.log.tgz.1
[2025-06-04 18:27:27]  mtime=0
[2025-06-04 18:27:27]  protocol_id=None
[2025-06-04 18:27:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 18:27:27]  replicas=None
[2025-06-04 18:27:27]  scope=mc23_13p6TeV
[2025-06-04 18:27:27]  status=None
[2025-06-04 18:27:27]  status_code=0
[2025-06-04 18:27:27]  storage_token=
[2025-06-04 18:27:27]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678364632/log.45006595._054116.job.log.tgz.1
[2025-06-04 18:27:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/60/log.45006595._054116.job.log.tgz.1
[2025-06-04 18:27:27]  workdir=None
[2025-06-04 18:27:27] ]
[2025-06-04 18:27:27] 2025-06-04 16:27:00,765 | INFO     | transferring file log.45006595._054116.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678364632/log.45006595._054116.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 18:27:27] 2025-06-04 16:27:00,765 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678364632/log.45006595._054116.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._054116.job
[2025-06-04 18:27:27] 2025-06-04 16:27:00,780 | INFO     | adding to output.list: log.45006595._054116.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/60/log.45006595._054116.job.log.tg
[2025-06-04 18:27:27] 2025-06-04 16:27:00,780 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 18:27:27] 2025-06-04 16:27:00,781 | INFO     | summary of transferred files:
[2025-06-04 18:27:27] 2025-06-04 16:27:00,781 | INFO     |  -- lfn=log.45006595._054116.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 18:27:27] 2025-06-04 16:27:00,781 | INFO     | stage-out finished correctly
[2025-06-04 18:27:27] 2025-06-04 16:27:03,134 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 18:27:27] 2025-06-04 16:27:03,998 | INFO     | job 6678364632 has state=finished
[2025-06-04 18:27:27] 2025-06-04 16:27:03,998 | INFO     | preparing for final server update for job 6678364632 in state='finished'
[2025-06-04 18:27:27] 2025-06-04 16:27:03,998 | INFO     | this job has now completed (state=finished)
[2025-06-04 18:27:27] 2025-06-04 16:27:03,999 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 18:27:27] 2025-06-04 16:27:03,999 | INFO     | log transfer has been attempted: DONE
[2025-06-04 18:27:27] 2025-06-04 16:27:03,999 | INFO     | job 6678364632 has finished - writing final server update
[2025-06-04 18:27:27] 2025-06-04 16:27:03,999 | INFO     | total number of processed events: 400 (read)
[2025-06-04 18:27:27] 2025-06-04 16:27:04,002 | INFO     | executing command: lscpu
[2025-06-04 18:27:27] 2025-06-04 16:27:04,027 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 18:27:27] 2025-06-04 16:27:06,384 | WARNING  | process 510649 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 18:27:27] 2025-06-04 16:27:06,384 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678364632/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:27:27] 2025-06-04 16:27:06,462 | INFO     | number of running child processes to parent process 510649: 1
[2025-06-04 18:27:27] 2025-06-04 16:27:06,462 | INFO     | maximum number of monitored processes: 6
[2025-06-04 18:27:27] 2025-06-04 16:27:06,572 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 18:27:27] 2025-06-04 16:27:06,572 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678364632/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:27:27] 2025-06-04 16:27:06,572 | INFO     | extracted standard info from prmon json
[2025-06-04 18:27:27] 2025-06-04 16:27:06,572 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:27:27] 2025-06-04 16:27:06,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:27:27] 2025-06-04 16:27:06,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:27:27] 2025-06-04 16:27:06,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:27:27] 2025-06-04 16:27:06,574 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:27:27] 2025-06-04 16:27:06,575 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 18:27:27] 2025-06-04 16:27:06,575 | INFO     | sum of deviations: -7025700315.0
[2025-06-04 18:27:27] 2025-06-04 16:27:06,575 | INFO     | mean x: 1749052585.5
[2025-06-04 18:27:27] 2025-06-04 16:27:06,575 | INFO     | mean y: 3022848.0714285714
[2025-06-04 18:27:27] 2025-06-04 16:27:06,575 | INFO     | -- intersect: 225732612162.39917
[2025-06-04 18:27:27] 2025-06-04 16:27:06,575 | INFO     | intersect: 225732612162.39917
[2025-06-04 18:27:27] 2025-06-04 16:27:06,575 | INFO     | chi2: 0.10272263991384703
[2025-06-04 18:27:27] 2025-06-04 16:27:06,576 | INFO     | -- intersect: 225732612162.39917
[2025-06-04 18:27:27] 2025-06-04 16:27:06,576 | INFO     | current memory leak: -129.06 B/s (using 56 data points, chi2=0.10)
[2025-06-04 18:27:27] 2025-06-04 16:27:06,576 | INFO     | ..............................
[2025-06-04 18:27:27] 2025-06-04 16:27:06,576 | INFO     | . Timing measurements:
[2025-06-04 18:27:27] 2025-06-04 16:27:06,576 | INFO     | . get job = 0 s
[2025-06-04 18:27:27] 2025-06-04 16:27:06,576 | INFO     | . initial setup = 1 s
[2025-06-04 18:27:27] 2025-06-04 16:27:06,576 | INFO     | . payload setup = 5 s
[2025-06-04 18:27:27] 2025-06-04 16:27:06,577 | INFO     | . stage-in = 0 s
[2025-06-04 18:27:27] 2025-06-04 16:27:06,577 | INFO     | . payload execution = 3817 s
[2025-06-04 18:27:27] 2025-06-04 16:27:06,577 | INFO     | . stage-out = 0 s
[2025-06-04 18:27:27] 2025-06-04 16:27:06,577 | INFO     | . log creation = 0 s
[2025-06-04 18:27:27] 2025-06-04 16:27:06,577 | INFO     | ..............................
[2025-06-04 18:27:27] 2025-06-04 16:27:06,645 | INFO     | 
[2025-06-04 18:27:27] 2025-06-04 16:27:06,645 | INFO     | job summary report
[2025-06-04 18:27:27] 2025-06-04 16:27:06,645 | INFO     | --------------------------------------------------
[2025-06-04 18:27:27] 2025-06-04 16:27:06,645 | INFO     | PanDA job id: 6678364632
[2025-06-04 18:27:27] 2025-06-04 16:27:06,645 | INFO     | task id: 45006595
[2025-06-04 18:27:27] 2025-06-04 16:27:06,645 | INFO     | errors: (none)
[2025-06-04 18:27:27] 2025-06-04 16:27:06,645 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:27:27] 2025-06-04 16:27:06,646 | INFO     | pilot state: finished 
[2025-06-04 18:27:27] 2025-06-04 16:27:06,646 | INFO     | transexitcode: 0
[2025-06-04 18:27:27] 2025-06-04 16:27:06,646 | INFO     | exeerrorcode: 0
[2025-06-04 18:27:27] 2025-06-04 16:27:06,646 | INFO     | exeerrordiag: 
[2025-06-04 18:27:27] 2025-06-04 16:27:06,646 | INFO     | exitcode: 0
[2025-06-04 18:27:27] 2025-06-04 16:27:06,646 | INFO     | exitmsg: OK
[2025-06-04 18:27:27] 2025-06-04 16:27:06,646 | INFO     | cpuconsumptiontime: 40969 s
[2025-06-04 18:27:27] 2025-06-04 16:27:06,646 | INFO     | nevents: 400
[2025-06-04 18:27:27] 2025-06-04 16:27:06,646 | INFO     | neventsw: 0
[2025-06-04 18:27:27] 2025-06-04 16:27:06,646 | INFO     | pid: 510649
[2025-06-04 18:27:27] 2025-06-04 16:27:06,646 | INFO     | pgrp: 510649
[2025-06-04 18:27:27] 2025-06-04 16:27:06,646 | INFO     | corecount: 12
[2025-06-04 18:27:27] 2025-06-04 16:27:06,647 | INFO     | event service: False
[2025-06-04 18:27:27] 2025-06-04 16:27:06,647 | INFO     | sizes: {0: 2397171, 1: 2397370, 3: 2397576, 11: 2397604, 3826: 2423333, 3827: 2432274, 3829: 2432458, 3832: 2432628}
[2025-06-04 18:27:27] 2025-06-04 16:27:06,647 | INFO     | --------------------------------------------------
[2025-06-04 18:27:27] 2025-06-04 16:27:06,647 | INFO     | 
[2025-06-04 18:27:27] 2025-06-04 16:27:06,647 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 18:27:27] 2025-06-04 16:27:06,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:27:27] 2025-06-04 16:27:06,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,666 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:27:27] 2025-06-04 16:27:06,666 | INFO     | job 6678364632 has completed (purged errors)
[2025-06-04 18:27:27] 2025-06-04 16:27:06,666 | INFO     | overall cleanup function is called
[2025-06-04 18:27:27] 2025-06-04 16:27:07,672 | INFO     | --- collectZombieJob: --- 10, [510649]
[2025-06-04 18:27:27] 2025-06-04 16:27:07,673 | INFO     | zombie collector waiting for pid 510649
[2025-06-04 18:27:27] 2025-06-04 16:27:07,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:27:27] 2025-06-04 16:27:07,673 | INFO     | collected zombie processes
[2025-06-04 18:27:27] 2025-06-04 16:27:07,673 | INFO     | will attempt to kill all subprocesses of pid=510649
[2025-06-04 18:27:27] 2025-06-04 16:27:07,748 | INFO     | process IDs to be killed: [510649] (in reverse order)
[2025-06-04 18:27:27] 2025-06-04 16:27:07,782 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:27:27] 2025-06-04 16:27:07,782 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:27:27] 2025-06-04 16:27:07,784 | INFO     | did not find any defunct processes belonging to 510649
[2025-06-04 18:27:27] 2025-06-04 16:27:07,787 | INFO     | did not find any defunct processes belonging to 510649
[2025-06-04 18:27:27] 2025-06-04 16:27:07,787 | INFO     | ready for new job
[2025-06-04 18:27:27] 2025-06-04 16:27:07,787 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:27:27] 2025-06-04 16:27:07,788 | INFO     | **************************************
[2025-06-04 18:27:27] 2025-06-04 16:27:07,788 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:27:27] 2025-06-04 16:27:07,788 | INFO     | **************************************
[2025-06-04 18:27:27] 2025-06-04 16:27:07,788 | INFO     | 
[2025-06-04 18:27:27] 2025-06-04 16:27:07,789 | INFO     | architecture information:
[2025-06-04 18:27:27] 2025-06-04 16:27:07,789 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:27:27] 2025-06-04 16:27:07,799 | INFO     | cat /etc/os-release:
[2025-06-04 18:27:27] NAME="CentOS Linux"
[2025-06-04 18:27:27] VERSION="7 (Core)"
[2025-06-04 18:27:27] ID="centos"
[2025-06-04 18:27:27] ID_LIKE="rhel fedora"
[2025-06-04 18:27:27] VERSION_ID="7"
[2025-06-04 18:27:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:27:27] ANSI_COLOR="0;31"
[2025-06-04 18:27:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:27:27] HOME_URL="https://www.centos.org/"
[2025-06-04 18:27:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:27:27] 
[2025-06-04 18:27:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:27:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:27:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:27:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:27:27] 
[2025-06-04 18:27:27] 2025-06-04 16:27:07,799 | INFO     | **************************************
[2025-06-04 18:27:27] 2025-06-04 16:27:08,302 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 18:27:27] 2025-06-04 16:27:08,316 | INFO     | sufficient remaining disk space (1816436670464 B)
[2025-06-04 18:27:27] 2025-06-04 16:27:08,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:27:27] 2025-06-04 16:27:08,317 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:27:27] 2025-06-04 16:27:08,317 | INFO     | update_server=False
[2025-06-04 18:27:27] 2025-06-04 16:27:08,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:27:27] 2025-06-04 16:27:08,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:27:27] 2025-06-04 16:27:08,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:27:27] 2025-06-04 16:27:08,318 | INFO     | aborting loop
[2025-06-04 18:27:27] 2025-06-04 16:27:08,660 | INFO     | all payload control threads have been joined
[2025-06-04 18:27:27] 2025-06-04 16:27:08,755 | INFO     | all job control threads have been joined
[2025-06-04 18:27:27] 2025-06-04 16:27:08,846 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:27:27] 2025-06-04 16:27:08,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:27:27] 2025-06-04 16:27:08,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:27:27] 2025-06-04 16:27:08,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:27:27] 2025-06-04 16:27:09,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:27:27] 2025-06-04 16:27:09,250 | INFO     | all data control threads have been joined
[2025-06-04 18:27:27] 2025-06-04 16:27:09,320 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:09,322 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:09,323 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:09,524 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:09,665 | INFO     | [payload] control thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:09,761 | INFO     | [job] control thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:09,875 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:10,130 | INFO     | [job] validate thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:10,153 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:10,256 | INFO     | [data] control thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:10,377 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:10,529 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:10,847 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:10,863 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:13,210 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:19,084 | INFO     | job.realtimelogging is not enabled
[2025-06-04 18:27:27] 2025-06-04 16:27:20,089 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:27:27] 2025-06-04 16:27:21,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140470140540736)>', '<ExcThread(monitor, started 140469388441344)>']
[2025-06-04 18:27:27] 2025-06-04 16:27:21,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:27:27] 2025-06-04 16:27:21,912 | INFO     | [monitor] control thread has ended
[2025-06-04 18:27:27] 2025-06-04 16:27:26,849 | INFO     | all workflow threads have been joined
[2025-06-04 18:27:27] 2025-06-04 16:27:26,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:27:27] 2025-06-04 16:27:26,849 | INFO     | traces error code: 0
[2025-06-04 18:27:27] 2025-06-04 16:27:26,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:27:27] 2025-06-04 16:27:26,920 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:27:27] 2025-06-04 16:27:26,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:27:27] 2025-06-04 16:27:26,925 [wrapper] pilotpid: 503509
[2025-06-04 18:27:27] 2025-06-04 16:27:26,927 [wrapper] Pilot exit status: 0
[2025-06-04 18:27:27] 2025-06-04 16:27:26,935 [wrapper] pandaids: 6678364632
[2025-06-04 18:27:27] 2025-06-04 16:27:26,954 [wrapper] cleanup supervisor_pilot  526692 503510
[2025-06-04 18:27:27] 2025-06-04 16:27:26,956 [wrapper] Test setup, not cleaning
[2025-06-04 18:27:27] 2025-06-04 16:27:26,958 [wrapper] apfmon messages muted
[2025-06-04 18:27:27] 2025-06-04 16:27:26,960 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:27:27] 2025-06-04 16:27:26,962 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:27:27]  *** Error codes and diagnostics ***
[2025-06-04 18:27:27]     "exeErrorCode": 0,
[2025-06-04 18:27:27]     "exeErrorDiag": "",
[2025-06-04 18:27:27]     "pilotErrorCode": 0,
[2025-06-04 18:27:27]     "pilotErrorDiag": "",
[2025-06-04 18:27:27]  *** Listing of results directory ***
[2025-06-04 18:27:27] total 397724
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc      5111 Jun  4 08:29 queuedata.json
[2025-06-04 18:27:27] -rwx------ 1 boinc boinc     37140 Jun  4 08:30 runpilot2-wrapper.sh
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc       100 Jun  4 17:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:27:27] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 17:22 run_atlas
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc       105 Jun  4 17:22 job.xml
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc      6254 Jun  4 17:22 init_data.xml
[2025-06-04 18:27:27] -rw-r--r-- 2 boinc boinc 213750168 Jun  4 17:22 EVNT.45006593._002166.pool.root.1
[2025-06-04 18:27:27] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:22 start_atlas.sh
[2025-06-04 18:27:27] drwxrwx--x 2 boinc boinc        68 Jun  4 17:22 shared
[2025-06-04 18:27:27] -rw-r--r-- 2 boinc boinc    508880 Jun  4 17:22 input.tar.gz
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc         0 Jun  4 17:22 boinc_lockfile
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc      2525 Jun  4 17:22 pandaJob.out
[2025-06-04 18:27:27] -rw------- 1 boinc boinc    990989 Jun  4 17:22 agis_schedconf.cvmfs.json
[2025-06-04 18:27:27] -rw------- 1 boinc boinc   1598969 Jun  4 17:22 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:27:27] drwx------ 4 boinc boinc      4096 Jun  4 17:23 pilot3
[2025-06-04 18:27:27] -rw------- 1 boinc boinc 188238413 Jun  4 18:26 HITS.45006595._054116.pool.root.1
[2025-06-04 18:27:27] -rw------- 1 boinc boinc        95 Jun  4 18:26 pilot_heartbeat.json
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc       529 Jun  4 18:26 boinc_task_state.xml
[2025-06-04 18:27:27] -rw------- 1 boinc boinc      1012 Jun  4 18:26 memory_monitor_summary.json
[2025-06-04 18:27:27] -rw------- 1 boinc boinc    349909 Jun  4 18:27 log.45006595._054116.job.log.tgz.1
[2025-06-04 18:27:27] -rw------- 1 boinc boinc      7689 Jun  4 18:27 heartbeat.json
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc      8192 Jun  4 18:27 boinc_mmap_file
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc        27 Jun  4 18:27 wrapper_checkpoint.txt
[2025-06-04 18:27:27] -rw------- 1 boinc boinc      4427 Jun  4 18:27 pilotlog.txt
[2025-06-04 18:27:27] -rw------- 1 boinc boinc    378099 Jun  4 18:27 log.45006595._054116.job.log.1
[2025-06-04 18:27:27] -rw------- 1 boinc boinc       357 Jun  4 18:27 output.list
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc       620 Jun  4 18:27 runtime_log
[2025-06-04 18:27:27] -rw------- 1 boinc boinc    747520 Jun  4 18:27 result.tar.gz
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc      8683 Jun  4 18:27 runtime_log.err
[2025-06-04 18:27:27] -rw------- 1 boinc boinc       656 Jun  4 18:27 oZgKDmxowg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFVnKDm0lcg8n.diag
[2025-06-04 18:27:27] -rw-r--r-- 1 boinc boinc     21200 Jun  4 18:27 stderr.txt
[2025-06-04 18:27:27] HITS file was successfully produced:
[2025-06-04 18:27:27] -rw------- 1 boinc boinc 188238413 Jun  4 18:26 shared/HITS.pool.root.1
[2025-06-04 18:27:27]  *** Contents of shared directory: ***
[2025-06-04 18:27:27] total 393820
[2025-06-04 18:27:27] -rw-r--r-- 2 boinc boinc 213750168 Jun  4 17:22 ATLAS.root_0
[2025-06-04 18:27:27] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:22 start_atlas.sh
[2025-06-04 18:27:27] -rw-r--r-- 2 boinc boinc    508880 Jun  4 17:22 input.tar.gz
[2025-06-04 18:27:27] -rw------- 1 boinc boinc 188238413 Jun  4 18:26 HITS.pool.root.1
[2025-06-04 18:27:27] -rw------- 1 boinc boinc    747520 Jun  4 18:27 result.tar.gz
18:27:28 (499842): run_atlas exited; CPU time 40980.472595
18:27:28 (499842): called boinc_finish(0)

</stderr_txt>
]]>

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