Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:24:01 (3742091): wrapper (7.7.26015): starting
13:24:01 (3742091): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 13:24:01] Arguments: --nthreads 4
[2025-06-04 13:24:01] Threads: 4
[2025-06-04 13:24:01] Checking for CVMFS
[2025-06-04 13:24:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:24:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:24:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:24:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:24:01] 2.12.7.0 963705 1251 55944 146780 4 62 3541937 4096001 6419 130560 0 7506292 99.998 317624 1540 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-06-04 13:24:01] CVMFS is ok
[2025-06-04 13:24:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:24:01] Checking for apptainer binary...
[2025-06-04 13:24:01] apptainer is not installed, using version from CVMFS
[2025-06-04 13:24:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:24:02] senture-z10pe-l
[2025-06-04 13:24:02] apptainer works
[2025-06-04 13:24:02] Set ATHENA_PROC_NUMBER=4
[2025-06-04 13:24:02] Set ATHENA_CORE_NUMBER=4
[2025-06-04 13:24:02] Starting ATLAS job with PandaID=6678364770
[2025-06-04 13:24:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:04:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:04:42] 2025-06-04 15:04:21,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:04:42] 2025-06-04 15:04:21,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:04:42] 2025-06-04 15:04:21,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:04:42] 2025-06-04 15:04:21,668 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:04:42] 2025-06-04 15:04:21,669 | INFO     | sum of square deviations: 1199940638.0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,670 | INFO     | sum of deviations: 12672972955.0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,670 | INFO     | mean x: 1749044634.0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,670 | INFO     | mean y: 2300437.305732484
[2025-06-04 16:04:42] 2025-06-04 15:04:21,670 | INFO     | -- intersect: -18469942806.922047
[2025-06-04 16:04:42] 2025-06-04 15:04:21,670 | INFO     | intersect: -18469942806.922047
[2025-06-04 16:04:42] 2025-06-04 15:04:21,670 | INFO     | chi2: 1.0424474579822438
[2025-06-04 16:04:42] 2025-06-04 15:04:21,670 | INFO     | sum of square deviations: 1088905998.0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,671 | INFO     | sum of deviations: 12272494047.0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,671 | INFO     | mean x: 1749044481.5
[2025-06-04 16:04:42] 2025-06-04 15:04:21,671 | INFO     | mean y: 2299887.1578947366
[2025-06-04 16:04:42] 2025-06-04 15:04:21,671 | INFO     | -- intersect: -19710272204.989727
[2025-06-04 16:04:42] 2025-06-04 15:04:21,672 | INFO     | intersect: -19710272204.989727
[2025-06-04 16:04:42] 2025-06-04 15:04:21,672 | INFO     | chi2: 1.0432589888531931
[2025-06-04 16:04:42] 2025-06-04 15:04:21,672 | INFO     | current chi2=1.0432589888531931 (change=-0.07784861143218792 %)
[2025-06-04 16:04:42] 2025-06-04 15:04:21,672 | INFO     | right removable region: 151
[2025-06-04 16:04:42] 2025-06-04 15:04:21,672 | INFO     | sum of square deviations: 1088905998.0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,673 | INFO     | sum of deviations: -921211416.5000001
[2025-06-04 16:04:42] 2025-06-04 15:04:21,673 | INFO     | mean x: 1749044786.5
[2025-06-04 16:04:42] 2025-06-04 15:04:21,673 | INFO     | mean y: 2318722.0986842103
[2025-06-04 16:04:42] 2025-06-04 15:04:21,673 | INFO     | -- intersect: 1482005699.9029934
[2025-06-04 16:04:42] 2025-06-04 15:04:21,673 | INFO     | intersect: 1482005699.9029934
[2025-06-04 16:04:42] 2025-06-04 15:04:21,673 | INFO     | chi2: 0.0009929706603477484
[2025-06-04 16:04:42] 2025-06-04 15:04:21,673 | INFO     | current chi2=0.0009929706603477484 (change=99.9047462150016 %)
[2025-06-04 16:04:42] 2025-06-04 15:04:21,674 | INFO     | sum of square deviations: 984941258.0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,674 | INFO     | sum of deviations: -1226691760.9999998
[2025-06-04 16:04:42] 2025-06-04 15:04:21,674 | INFO     | mean x: 1749044939.0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,675 | INFO     | mean y: 2319168.2789115645
[2025-06-04 16:04:42] 2025-06-04 15:04:21,675 | INFO     | -- intersect: 2180661276.362323
[2025-06-04 16:04:42] 2025-06-04 15:04:21,675 | INFO     | intersect: 2180661276.362323
[2025-06-04 16:04:42] 2025-06-04 15:04:21,675 | INFO     | chi2: 0.0006620061638252479
[2025-06-04 16:04:42] 2025-06-04 15:04:21,675 | INFO     | current chi2=0.0006620061638252479 (change=33.330742764000036 %)
[2025-06-04 16:04:42] 2025-06-04 15:04:21,675 | INFO     | sum of square deviations: 887813855.5
[2025-06-04 16:04:42] 2025-06-04 15:04:21,676 | INFO     | sum of deviations: -1260762975.5000005
[2025-06-04 16:04:42] 2025-06-04 15:04:21,676 | INFO     | mean x: 1749045091.5
[2025-06-04 16:04:42] 2025-06-04 15:04:21,676 | INFO     | mean y: 2319218.9929577466
[2025-06-04 16:04:42] 2025-06-04 15:04:21,676 | INFO     | -- intersect: 2486095835.2086644
[2025-06-04 16:04:42] 2025-06-04 15:04:21,676 | INFO     | intersect: 2486095835.2086644
[2025-06-04 16:04:42] 2025-06-04 15:04:21,676 | INFO     | chi2: 0.0005953254606940976
[2025-06-04 16:04:42] 2025-06-04 15:04:21,676 | INFO     | current chi2=0.0005953254606940976 (change=10.072519981664733 %)
[2025-06-04 16:04:42] 2025-06-04 15:04:21,676 | INFO     | left removable region: 30
[2025-06-04 16:04:42] 2025-06-04 15:04:21,677 | INFO     | sum of square deviations: 549294020.0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,677 | INFO     | sum of deviations: -649059032.0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,677 | INFO     | mean x: 1749045366.0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,677 | INFO     | mean y: 2318188.743801653
[2025-06-04 16:04:42] 2025-06-04 15:04:21,677 | INFO     | -- intersect: 2069032281.4623892
[2025-06-04 16:04:42] 2025-06-04 15:04:21,677 | INFO     | intersect: 2069032281.4623892
[2025-06-04 16:04:42] 2025-06-04 15:04:21,678 | INFO     | chi2: 0.0005064756594075465
[2025-06-04 16:04:42] 2025-06-04 15:04:21,678 | INFO     | -- intersect: 2069032281.4623892
[2025-06-04 16:04:42] 2025-06-04 15:04:21,678 | INFO     | current memory leak: -1.18 B/s (using 121 data points, chi2=0.00)
[2025-06-04 16:04:42] 2025-06-04 15:04:21,678 | INFO     | ..............................
[2025-06-04 16:04:42] 2025-06-04 15:04:21,679 | INFO     | . Timing measurements:
[2025-06-04 16:04:42] 2025-06-04 15:04:21,679 | INFO     | . get job = 0 s
[2025-06-04 16:04:42] 2025-06-04 15:04:21,679 | INFO     | . initial setup = 2 s
[2025-06-04 16:04:42] 2025-06-04 15:04:21,679 | INFO     | . payload setup = 6 s
[2025-06-04 16:04:42] 2025-06-04 15:04:21,679 | INFO     | . stage-in = 0 s
[2025-06-04 16:04:42] 2025-06-04 15:04:21,679 | INFO     | . payload execution = 9580 s
[2025-06-04 16:04:42] 2025-06-04 15:04:21,679 | INFO     | . stage-out = 0 s
[2025-06-04 16:04:42] 2025-06-04 15:04:21,679 | INFO     | . log creation = 0 s
[2025-06-04 16:04:42] 2025-06-04 15:04:21,679 | INFO     | ..............................
[2025-06-04 16:04:42] 2025-06-04 15:04:21,767 | INFO     | 
[2025-06-04 16:04:42] 2025-06-04 15:04:21,767 | INFO     | job summary report
[2025-06-04 16:04:42] 2025-06-04 15:04:21,767 | INFO     | --------------------------------------------------
[2025-06-04 16:04:42] 2025-06-04 15:04:21,767 | INFO     | PanDA job id: 6678364770
[2025-06-04 16:04:42] 2025-06-04 15:04:21,767 | INFO     | task id: 45006595
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | errors: (none)
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | pilot state: finished 
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | transexitcode: 0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | exeerrorcode: 0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | exeerrordiag: 
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | exitcode: 0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | exitmsg: OK
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | cpuconsumptiontime: 36716 s
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | nevents: 400
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | neventsw: 0
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | pid: 3752859
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | pgrp: 3752859
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | corecount: 4
[2025-06-04 16:04:42] 2025-06-04 15:04:21,768 | INFO     | event service: False
[2025-06-04 16:04:42] 2025-06-04 15:04:21,769 | INFO     | sizes: {0: 2397349, 4: 2397555, 11: 2397583, 9590: 2425682, 9591: 2434692, 9592: 2434692, 9597: 2434990}
[2025-06-04 16:04:42] 2025-06-04 15:04:21,769 | INFO     | --------------------------------------------------
[2025-06-04 16:04:42] 2025-06-04 15:04:21,769 | INFO     | 
[2025-06-04 16:04:42] 2025-06-04 15:04:21,769 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-06-04 16:04:42] 2025-06-04 15:04:21,798 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,799 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,799 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,799 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,799 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,799 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,799 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,799 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,799 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,800 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,800 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,800 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:04:42] 2025-06-04 15:04:21,800 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,800 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:04:42] 2025-06-04 15:04:21,800 | INFO     | job 6678364770 has completed (purged errors)
[2025-06-04 16:04:42] 2025-06-04 15:04:21,800 | INFO     | overall cleanup function is called
[2025-06-04 16:04:42] 2025-06-04 15:04:22,808 | INFO     | --- collectZombieJob: --- 10, [3752859]
[2025-06-04 16:04:42] 2025-06-04 15:04:22,809 | INFO     | zombie collector waiting for pid 3752859
[2025-06-04 16:04:42] 2025-06-04 15:04:22,809 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:04:42] 2025-06-04 15:04:22,809 | INFO     | collected zombie processes
[2025-06-04 16:04:42] 2025-06-04 15:04:22,809 | INFO     | will attempt to kill all subprocesses of pid=3752859
[2025-06-04 16:04:42] 2025-06-04 15:04:23,098 | INFO     | process IDs to be killed: [3752859] (in reverse order)
[2025-06-04 16:04:42] 2025-06-04 15:04:23,226 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:04:42] 2025-06-04 15:04:23,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:04:42] 2025-06-04 15:04:23,236 | INFO     | did not find any defunct processes belonging to 3752859
[2025-06-04 16:04:42] 2025-06-04 15:04:23,245 | INFO     | did not find any defunct processes belonging to 3752859
[2025-06-04 16:04:42] 2025-06-04 15:04:23,245 | INFO     | ready for new job
[2025-06-04 16:04:42] 2025-06-04 15:04:23,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:04:42] 2025-06-04 15:04:23,247 | INFO     | **************************************
[2025-06-04 16:04:42] 2025-06-04 15:04:23,248 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:04:42] 2025-06-04 15:04:23,248 | INFO     | **************************************
[2025-06-04 16:04:42] 2025-06-04 15:04:23,248 | INFO     | 
[2025-06-04 16:04:42] 2025-06-04 15:04:23,251 | INFO     | pilot is running in a VM
[2025-06-04 16:04:42] 2025-06-04 15:04:23,251 | INFO     | architecture information:
[2025-06-04 16:04:42] 2025-06-04 15:04:23,251 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:04:42] 2025-06-04 15:04:23,269 | INFO     | cat /etc/os-release:
[2025-06-04 16:04:42] NAME="CentOS Linux"
[2025-06-04 16:04:42] VERSION="7 (Core)"
[2025-06-04 16:04:42] ID="centos"
[2025-06-04 16:04:42] ID_LIKE="rhel fedora"
[2025-06-04 16:04:42] VERSION_ID="7"
[2025-06-04 16:04:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:04:42] ANSI_COLOR="0;31"
[2025-06-04 16:04:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:04:42] HOME_URL="https://www.centos.org/"
[2025-06-04 16:04:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:04:42] 
[2025-06-04 16:04:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:04:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:04:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:04:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:04:42] 
[2025-06-04 16:04:42] 2025-06-04 15:04:23,270 | INFO     | **************************************
[2025-06-04 16:04:42] 2025-06-04 15:04:23,771 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-06-04 16:04:42] 2025-06-04 15:04:23,796 | INFO     | sufficient remaining disk space (111598895104 B)
[2025-06-04 16:04:42] 2025-06-04 15:04:23,796 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:04:42] 2025-06-04 15:04:23,797 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:04:42] 2025-06-04 15:04:23,797 | INFO     | update_server=False
[2025-06-04 16:04:42] 2025-06-04 15:04:23,797 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:04:42] 2025-06-04 15:04:23,797 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:04:42] 2025-06-04 15:04:24,224 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 16:04:42] 2025-06-04 15:04:24,224 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 16:04:42] 2025-06-04 15:04:24,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:04:42] 2025-06-04 15:04:24,225 | INFO     | will abort loop
[2025-06-04 16:04:42] 2025-06-04 15:04:24,617 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:04:42] 2025-06-04 15:04:24,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:04:42] 2025-06-04 15:04:24,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:04:42] 2025-06-04 15:04:24,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:04:42] 2025-06-04 15:04:24,753 | INFO     | all payload control threads have been joined
[2025-06-04 16:04:42] 2025-06-04 15:04:24,802 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:24,847 | INFO     | all data control threads have been joined
[2025-06-04 16:04:42] 2025-06-04 15:04:24,866 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:25,003 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:25,229 | INFO     | [job] validate thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:25,230 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:25,272 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:25,334 | INFO     | all job control threads have been joined
[2025-06-04 16:04:42] 2025-06-04 15:04:25,349 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:25,758 | INFO     | [payload] control thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:25,786 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:25,852 | INFO     | [data] control thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:26,114 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:26,337 | INFO     | [job] control thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:26,751 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:26,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:04:42] 2025-06-04 15:04:27,789 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:27,803 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:33,950 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:04:42] 2025-06-04 15:04:34,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:04:42] 2025-06-04 15:04:37,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123572360742720)>', '<ExcThread(monitor, started 123571242268416)>']
[2025-06-04 16:04:42] 2025-06-04 15:04:37,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:04:42] 2025-06-04 15:04:37,683 | INFO     | [monitor] control thread has ended
[2025-06-04 16:04:42] 2025-06-04 15:04:42,080 | INFO     | all workflow threads have been joined
[2025-06-04 16:04:42] 2025-06-04 15:04:42,080 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:04:42] 2025-06-04 15:04:42,080 | INFO     | traces error code: 0
[2025-06-04 16:04:42] 2025-06-04 15:04:42,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:04:42] 2025-06-04 15:04:42,244 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:04:42] 2025-06-04 15:04:42,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:04:42] 2025-06-04 15:04:42,251 [wrapper] pilotpid: 3745955
[2025-06-04 16:04:42] 2025-06-04 15:04:42,254 [wrapper] Pilot exit status: 0
[2025-06-04 16:04:42] 2025-06-04 15:04:42,264 [wrapper] pandaids: 6678364770
[2025-06-04 16:04:42] 2025-06-04 15:04:42,326 [wrapper] cleanup supervisor_pilot 4157848 3745956
[2025-06-04 16:04:42] 2025-06-04 15:04:42,331 [wrapper] Test setup, not cleaning
[2025-06-04 16:04:42] 2025-06-04 15:04:42,335 [wrapper] apfmon messages muted
[2025-06-04 16:04:42] 2025-06-04 15:04:42,338 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:04:42] 2025-06-04 15:04:42,343 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:04:42]  *** Error codes and diagnostics ***
[2025-06-04 16:04:42]     "exeErrorCode": 0,
[2025-06-04 16:04:42]     "exeErrorDiag": "",
[2025-06-04 16:04:42]     "pilotErrorCode": 0,
[2025-06-04 16:04:42]     "pilotErrorDiag": "",
[2025-06-04 16:04:42]  *** Listing of results directory ***
[2025-06-04 16:04:42] total 389196
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc    495897 Jun  4 06:59 pilot3.tar.gz
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc      5111 Jun  4 07:31 queuedata.json
[2025-06-04 16:04:42] -rwx------ 1 boinc boinc     37140 Jun  4 07:31 runpilot2-wrapper.sh
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc       100 Jun  4 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:04:42] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 13:24 run_atlas
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc       105 Jun  4 13:24 job.xml
[2025-06-04 16:04:42] -rw-r--r-- 2 boinc boinc 213693393 Jun  4 13:24 EVNT.45006593._002171.pool.root.1
[2025-06-04 16:04:42] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:24 start_atlas.sh
[2025-06-04 16:04:42] drwxrwx--x 2 boinc boinc      4096 Jun  4 13:24 shared
[2025-06-04 16:04:42] -rw-r--r-- 2 boinc boinc    508874 Jun  4 13:24 input.tar.gz
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc         0 Jun  4 13:24 boinc_lockfile
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc      2525 Jun  4 13:24 pandaJob.out
[2025-06-04 16:04:42] -rw------- 1 boinc boinc    986811 Jun  4 13:24 agis_schedconf.cvmfs.json
[2025-06-04 16:04:42] -rw------- 1 boinc boinc   1598969 Jun  4 13:24 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:04:42] drwx------ 4 boinc boinc      4096 Jun  4 13:24 pilot3
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc      6665 Jun  4 13:25 init_data.xml
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc       530 Jun  4 16:03 boinc_task_state.xml
[2025-06-04 16:04:42] -rw------- 1 boinc boinc 178629505 Jun  4 16:03 HITS.45006595._054254.pool.root.1
[2025-06-04 16:04:42] -rw------- 1 boinc boinc      1030 Jun  4 16:04 memory_monitor_summary.json
[2025-06-04 16:04:42] -rw------- 1 boinc boinc    298674 Jun  4 16:04 log.45006595._054254.job.log.tgz.1
[2025-06-04 16:04:42] -rw------- 1 boinc boinc      7684 Jun  4 16:04 heartbeat.json
[2025-06-04 16:04:42] -rw------- 1 boinc boinc        95 Jun  4 16:04 pilot_heartbeat.json
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc      8192 Jun  4 16:04 boinc_mmap_file
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc        27 Jun  4 16:04 wrapper_checkpoint.txt
[2025-06-04 16:04:42] -rw------- 1 boinc boinc      4681 Jun  4 16:04 pilotlog.txt
[2025-06-04 16:04:42] -rw------- 1 boinc boinc    893081 Jun  4 16:04 log.45006595._054254.job.log.1
[2025-06-04 16:04:42] -rw------- 1 boinc boinc       357 Jun  4 16:04 output.list
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc       620 Jun  4 16:04 runtime_log
[2025-06-04 16:04:42] -rw------- 1 boinc boinc   1208320 Jun  4 16:04 result.tar.gz
[2025-06-04 16:04:42] -rw------- 1 boinc boinc       651 Jun  4 16:04 S5fKDm6pwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmuraKDm5fKMqn.diag
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc      8748 Jun  4 16:04 runtime_log.err
[2025-06-04 16:04:42] -rw-r--r-- 1 boinc boinc     20494 Jun  4 16:04 stderr.txt
[2025-06-04 16:04:42] HITS file was successfully produced:
[2025-06-04 16:04:42] -rw------- 1 boinc boinc 178629505 Jun  4 16:03 shared/HITS.pool.root.1
[2025-06-04 16:04:42]  *** Contents of shared directory: ***
[2025-06-04 16:04:42] total 384836
[2025-06-04 16:04:42] -rw-r--r-- 2 boinc boinc 213693393 Jun  4 13:24 ATLAS.root_0
[2025-06-04 16:04:42] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:24 start_atlas.sh
[2025-06-04 16:04:42] -rw-r--r-- 2 boinc boinc    508874 Jun  4 13:24 input.tar.gz
[2025-06-04 16:04:42] -rw------- 1 boinc boinc 178629505 Jun  4 16:03 HITS.pool.root.1
[2025-06-04 16:04:42] -rw------- 1 boinc boinc   1208320 Jun  4 16:04 result.tar.gz
16:04:43 (3742091): run_atlas exited; CPU time 37061.242563
16:04:43 (3742091): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN