Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:30:43 (295529): wrapper (7.7.26015): starting
07:30:43 (295529): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:30:43] Arguments: --nthreads 8
[2025-06-04 07:30:43] Threads: 8
[2025-06-04 07:30:43] Checking for CVMFS
[2025-06-04 07:30:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:30:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:30:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:30:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:30:43] 2.12.6.0 54733 37119 527396 146779 2 323 31422449 32935937 29818 16776704 1 494796388 99.711 351411134 21620 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:30:43] CVMFS is ok
[2025-06-04 07:30:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:30:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:30:43] Further information can be found at the LHC@home message board.
[2025-06-04 07:30:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:30:43] Checking for apptainer binary...
[2025-06-04 07:30:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:30:43] Running /usr/bin/apptainer --version
[2025-06-04 07:30:43] apptainer version 1.4.1-1.el9
[2025-06-04 07:30:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:30:43] c7-2-10.aglt2.org
[2025-06-04 07:30:43] apptainer works
[2025-06-04 07:30:43] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:30:43] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:30:43] Starting ATLAS job with PandaID=6678364677
[2025-06-04 07:30:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:40:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:40:03]  scope=mc23_13p6TeV
[2025-06-04 08:40:03]  status=None
[2025-06-04 08:40:03]  status_code=0
[2025-06-04 08:40:03]  storage_token=
[2025-06-04 08:40:03]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678364677/log.45006595._054161.job.log.tgz.1
[2025-06-04 08:40:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/3d/log.45006595._054161.job.log.tgz.1
[2025-06-04 08:40:03]  workdir=None
[2025-06-04 08:40:03] ]
[2025-06-04 08:40:03] 2025-06-04 12:39:37,710 | INFO     | transferring file log.45006595._054161.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678364677/log.45006595._054161.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:40:03] 2025-06-04 12:39:37,710 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678364677/log.45006595._054161.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._054161.job
[2025-06-04 08:40:03] 2025-06-04 12:39:37,731 | INFO     | adding to output.list: log.45006595._054161.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/3d/log.45006595._054161.job.log.tg
[2025-06-04 08:40:03] 2025-06-04 12:39:37,732 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:40:03] 2025-06-04 12:39:37,732 | INFO     | summary of transferred files:
[2025-06-04 08:40:03] 2025-06-04 12:39:37,732 | INFO     |  -- lfn=log.45006595._054161.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:40:03] 2025-06-04 12:39:37,732 | INFO     | stage-out finished correctly
[2025-06-04 08:40:03] 2025-06-04 12:39:37,800 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:40:03] 2025-06-04 12:39:38,999 | INFO     | job 6678364677 has state=finished
[2025-06-04 08:40:03] 2025-06-04 12:39:39,000 | INFO     | preparing for final server update for job 6678364677 in state='finished'
[2025-06-04 08:40:03] 2025-06-04 12:39:39,000 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:40:03] 2025-06-04 12:39:39,000 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:40:03] 2025-06-04 12:39:39,000 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:40:03] 2025-06-04 12:39:39,000 | INFO     | job 6678364677 has finished - writing final server update
[2025-06-04 08:40:03] 2025-06-04 12:39:39,001 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:40:03] 2025-06-04 12:39:39,019 | INFO     | executing command: lscpu
[2025-06-04 08:40:03] 2025-06-04 12:39:39,115 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:40:03] 2025-06-04 12:39:42,971 | WARNING  | process 318156 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:40:03] 2025-06-04 12:39:42,972 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678364677/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:40:03] 2025-06-04 12:39:42,973 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678364677/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:40:03] 2025-06-04 12:39:42,974 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2897656 B
[2025-06-04 08:40:03] 2025-06-04 12:39:42,974 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15540 B
[2025-06-04 08:40:03] 2025-06-04 12:39:42,974 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 08:40:03] 2025-06-04 12:39:43,593 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:40:03] 2025-06-04 12:39:43,598 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678364677/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:40:03] 2025-06-04 12:39:43,599 | INFO     | extracted standard info from prmon json
[2025-06-04 08:40:03] 2025-06-04 12:39:43,599 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:40:03] 2025-06-04 12:39:43,599 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:40:03] 2025-06-04 12:39:43,600 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:40:03] 2025-06-04 12:39:43,600 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:40:03] 2025-06-04 12:39:43,602 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:40:03] 2025-06-04 12:39:43,602 | INFO     | sum of square deviations: 70364110.0
[2025-06-04 08:40:03] 2025-06-04 12:39:43,603 | INFO     | sum of deviations: 3930976090.9999976
[2025-06-04 08:40:03] 2025-06-04 12:39:43,603 | INFO     | mean x: 1749038818.0
[2025-06-04 08:40:03] 2025-06-04 12:39:43,603 | INFO     | mean y: 2326206.180327869
[2025-06-04 08:40:03] 2025-06-04 12:39:43,603 | INFO     | -- intersect: -97709842338.10875
[2025-06-04 08:40:03] 2025-06-04 12:39:43,603 | INFO     | intersect: -97709842338.10875
[2025-06-04 08:40:03] 2025-06-04 12:39:43,603 | INFO     | chi2: 0.721736383050228
[2025-06-04 08:40:03] 2025-06-04 12:39:43,603 | INFO     | -- intersect: -97709842338.10875
[2025-06-04 08:40:03] 2025-06-04 12:39:43,603 | INFO     | current memory leak: 55.87 B/s (using 61 data points, chi2=0.72)
[2025-06-04 08:40:03] 2025-06-04 12:39:43,604 | INFO     | ..............................
[2025-06-04 08:40:03] 2025-06-04 12:39:43,604 | INFO     | . Timing measurements:
[2025-06-04 08:40:03] 2025-06-04 12:39:43,604 | INFO     | . get job = 0 s
[2025-06-04 08:40:03] 2025-06-04 12:39:43,604 | INFO     | . initial setup = 2 s
[2025-06-04 08:40:03] 2025-06-04 12:39:43,604 | INFO     | . payload setup = 6 s
[2025-06-04 08:40:03] 2025-06-04 12:39:43,604 | INFO     | . stage-in = 0 s
[2025-06-04 08:40:03] 2025-06-04 12:39:43,604 | INFO     | . payload execution = 4095 s
[2025-06-04 08:40:03] 2025-06-04 12:39:43,604 | INFO     | . stage-out = 0 s
[2025-06-04 08:40:03] 2025-06-04 12:39:43,604 | INFO     | . log creation = 0 s
[2025-06-04 08:40:03] 2025-06-04 12:39:43,604 | INFO     | ..............................
[2025-06-04 08:40:03] 2025-06-04 12:39:43,631 | INFO     | sufficient remaining disk space (75246862336 B)
[2025-06-04 08:40:03] 2025-06-04 12:39:43,648 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 08:40:03] 2025-06-04 12:39:43,651 | INFO     | 
[2025-06-04 08:40:03] 2025-06-04 12:39:43,651 | INFO     | job summary report
[2025-06-04 08:40:03] 2025-06-04 12:39:43,651 | INFO     | --------------------------------------------------
[2025-06-04 08:40:03] 2025-06-04 12:39:43,651 | INFO     | PanDA job id: 6678364677
[2025-06-04 08:40:03] 2025-06-04 12:39:43,651 | INFO     | task id: 45006595
[2025-06-04 08:40:03] 2025-06-04 12:39:43,651 | INFO     | errors: (none)
[2025-06-04 08:40:03] 2025-06-04 12:39:43,652 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:40:03] 2025-06-04 12:39:43,652 | INFO     | pilot state: finished 
[2025-06-04 08:40:03] 2025-06-04 12:39:43,652 | INFO     | transexitcode: 0
[2025-06-04 08:40:03] 2025-06-04 12:39:43,652 | INFO     | exeerrorcode: 0
[2025-06-04 08:40:03] 2025-06-04 12:39:43,652 | INFO     | exeerrordiag: 
[2025-06-04 08:40:03] 2025-06-04 12:39:43,652 | INFO     | exitcode: 0
[2025-06-04 08:40:03] 2025-06-04 12:39:43,652 | INFO     | exitmsg: OK
[2025-06-04 08:40:03] 2025-06-04 12:39:43,652 | INFO     | cpuconsumptiontime: 26231 s
[2025-06-04 08:40:03] 2025-06-04 12:39:43,652 | INFO     | nevents: 400
[2025-06-04 08:40:03] 2025-06-04 12:39:43,652 | INFO     | neventsw: 0
[2025-06-04 08:40:03] 2025-06-04 12:39:43,652 | INFO     | pid: 318156
[2025-06-04 08:40:03] 2025-06-04 12:39:43,653 | INFO     | pgrp: 318156
[2025-06-04 08:40:03] 2025-06-04 12:39:43,653 | INFO     | corecount: 8
[2025-06-04 08:40:03] 2025-06-04 12:39:43,653 | INFO     | event service: False
[2025-06-04 08:40:03] 2025-06-04 12:39:43,653 | INFO     | sizes: {0: 2397226, 1: 2397340, 5: 2397574, 11: 2397630, 4106: 2423402, 4107: 2432527, 4113: 2432641}
[2025-06-04 08:40:03] 2025-06-04 12:39:43,653 | INFO     | --------------------------------------------------
[2025-06-04 08:40:03] 2025-06-04 12:39:43,653 | INFO     | 
[2025-06-04 08:40:03] 2025-06-04 12:39:43,653 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 08:40:03] 2025-06-04 12:39:43,657 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6678364677: 3193027 B (within 2537553920 B limit)
[2025-06-04 08:40:03] 2025-06-04 12:39:43,657 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6678364677/HITS.45006595._054161.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 08:40:03] 2025-06-04 12:39:43,657 | INFO     | total size of present files: 0 B (workdir size: 3193027 B)
[2025-06-04 08:40:03] 2025-06-04 12:39:43,657 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6678364677/HITS.45006595._054161.pool.root.1 since it does not exist
[2025-06-04 08:40:03] 2025-06-04 12:39:43,673 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,674 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,674 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,674 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,674 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:40:03] 2025-06-04 12:39:43,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:40:03] 2025-06-04 12:39:43,676 | INFO     | job 6678364677 has completed (purged errors)
[2025-06-04 08:40:03] 2025-06-04 12:39:43,677 | INFO     | overall cleanup function is called
[2025-06-04 08:40:03] 2025-06-04 12:39:44,101 | INFO     | number of running child processes to parent process 318156: 1
[2025-06-04 08:40:03] 2025-06-04 12:39:44,101 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:40:03] 2025-06-04 12:39:44,101 | INFO     | aborting job monitoring since job object (job id=6678364677) has expired
[2025-06-04 08:40:03] 2025-06-04 12:39:44,686 | INFO     | --- collectZombieJob: --- 10, [318156]
[2025-06-04 08:40:03] 2025-06-04 12:39:44,686 | INFO     | zombie collector waiting for pid 318156
[2025-06-04 08:40:03] 2025-06-04 12:39:44,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:40:03] 2025-06-04 12:39:44,686 | INFO     | collected zombie processes
[2025-06-04 08:40:03] 2025-06-04 12:39:44,687 | INFO     | will attempt to kill all subprocesses of pid=318156
[2025-06-04 08:40:03] 2025-06-04 12:39:45,174 | INFO     | process IDs to be killed: [318156] (in reverse order)
[2025-06-04 08:40:03] 2025-06-04 12:39:45,351 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:40:03] 2025-06-04 12:39:45,352 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:40:03] 2025-06-04 12:39:45,369 | INFO     | did not find any defunct processes belonging to 318156
[2025-06-04 08:40:03] 2025-06-04 12:39:45,386 | INFO     | did not find any defunct processes belonging to 318156
[2025-06-04 08:40:03] 2025-06-04 12:39:45,387 | INFO     | ready for new job
[2025-06-04 08:40:03] 2025-06-04 12:39:45,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:40:03] 2025-06-04 12:39:45,388 | INFO     | **************************************
[2025-06-04 08:40:03] 2025-06-04 12:39:45,388 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:40:03] 2025-06-04 12:39:45,388 | INFO     | **************************************
[2025-06-04 08:40:03] 2025-06-04 12:39:45,388 | INFO     | 
[2025-06-04 08:40:03] 2025-06-04 12:39:45,405 | INFO     | architecture information:
[2025-06-04 08:40:03] 2025-06-04 12:39:45,405 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:40:03] 2025-06-04 12:39:45,417 | INFO     | cat /etc/os-release:
[2025-06-04 08:40:03] NAME="CentOS Linux"
[2025-06-04 08:40:03] VERSION="7 (Core)"
[2025-06-04 08:40:03] ID="centos"
[2025-06-04 08:40:03] ID_LIKE="rhel fedora"
[2025-06-04 08:40:03] VERSION_ID="7"
[2025-06-04 08:40:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:40:03] ANSI_COLOR="0;31"
[2025-06-04 08:40:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:40:03] HOME_URL="https://www.centos.org/"
[2025-06-04 08:40:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:40:03] 
[2025-06-04 08:40:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:40:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:40:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:40:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:40:03] 
[2025-06-04 08:40:03] 2025-06-04 12:39:45,417 | INFO     | **************************************
[2025-06-04 08:40:03] 2025-06-04 12:39:45,920 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 08:40:03] 2025-06-04 12:39:45,942 | INFO     | sufficient remaining disk space (75251056640 B)
[2025-06-04 08:40:03] 2025-06-04 12:39:45,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:40:03] 2025-06-04 12:39:45,943 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:40:03] 2025-06-04 12:39:45,943 | INFO     | update_server=False
[2025-06-04 08:40:03] 2025-06-04 12:39:45,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:40:03] 2025-06-04 12:39:45,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:40:03] 2025-06-04 12:39:45,944 | INFO     | aborting loop
[2025-06-04 08:40:03] 2025-06-04 12:39:45,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:40:03] 2025-06-04 12:39:46,092 | INFO     | all data control threads have been joined
[2025-06-04 08:40:03] 2025-06-04 12:39:46,479 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:40:03] 2025-06-04 12:39:46,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:40:03] 2025-06-04 12:39:46,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:40:03] 2025-06-04 12:39:46,716 | INFO     | all payload control threads have been joined
[2025-06-04 08:40:03] 2025-06-04 12:39:46,948 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:46,949 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:46,995 | INFO     | all job control threads have been joined
[2025-06-04 08:40:03] 2025-06-04 12:39:47,092 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:47,097 | INFO     | [data] control thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:47,435 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:47,491 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:47,718 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:47,722 | INFO     | [payload] control thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:47,908 | INFO     | [job] validate thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:47,950 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:48,001 | INFO     | [job] control thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:48,274 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:48,374 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:48,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:40:03] 2025-06-04 12:39:48,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:40:03] 2025-06-04 12:39:49,668 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:52,395 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:56,278 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:40:03] 2025-06-04 12:39:57,283 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:40:03] 2025-06-04 12:39:57,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140133645989696)>', '<ExcThread(monitor, started 140133131069184)>']
[2025-06-04 08:40:03] 2025-06-04 12:39:58,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:40:03] 2025-06-04 12:39:58,544 | INFO     | [monitor] control thread has ended
[2025-06-04 08:40:03] 2025-06-04 12:40:02,695 | INFO     | all workflow threads have been joined
[2025-06-04 08:40:03] 2025-06-04 12:40:02,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:40:03] 2025-06-04 12:40:02,696 | INFO     | traces error code: 0
[2025-06-04 08:40:03] 2025-06-04 12:40:02,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:40:03] 2025-06-04 12:40:02,810 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:40:03] 2025-06-04 12:40:02,812 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:40:03] 2025-06-04 12:40:02,815 [wrapper] pilotpid: 301997
[2025-06-04 08:40:03] 2025-06-04 12:40:02,818 [wrapper] Pilot exit status: 0
[2025-06-04 08:40:03] 2025-06-04 12:40:02,829 [wrapper] pandaids: 6678364677
[2025-06-04 08:40:03] 2025-06-04 12:40:02,962 [wrapper] cleanup supervisor_pilot 1115208 301998
[2025-06-04 08:40:03] 2025-06-04 12:40:02,965 [wrapper] Test setup, not cleaning
[2025-06-04 08:40:03] 2025-06-04 12:40:02,968 [wrapper] apfmon messages muted
[2025-06-04 08:40:03] 2025-06-04 12:40:02,970 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:40:03] 2025-06-04 12:40:02,973 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:40:03]  *** Error codes and diagnostics ***
[2025-06-04 08:40:03]     "exeErrorCode": 0,
[2025-06-04 08:40:03]     "exeErrorDiag": "",
[2025-06-04 08:40:03]     "pilotErrorCode": 0,
[2025-06-04 08:40:03]     "pilotErrorDiag": "",
[2025-06-04 08:40:03]  *** Listing of results directory ***
[2025-06-04 08:40:03] total 383508
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:29 queuedata.json
[2025-06-04 08:40:03] -rwx------. 1 boincer umatlas     37140 Jun  4 02:30 runpilot2-wrapper.sh
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:40:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:30 run_atlas
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:30 job.xml
[2025-06-04 08:40:03] -rw-r--r--. 2 boincer umatlas 213299160 Jun  4 07:30 EVNT.45006593._002168.pool.root.1
[2025-06-04 08:40:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:30 start_atlas.sh
[2025-06-04 08:40:03] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:30 shared
[2025-06-04 08:40:03] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 07:30 input.tar.gz
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:30 boinc_lockfile
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 07:30 pandaJob.out
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas    986812 Jun  4 07:30 agis_schedconf.cvmfs.json
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas   1598969 Jun  4 07:30 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:40:03] drwx------. 4 boincer umatlas      4096 Jun  4 07:30 pilot3
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas      6932 Jun  4 08:36 init_data.xml
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas        95 Jun  4 08:38 pilot_heartbeat.json
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas 174190192 Jun  4 08:39 HITS.45006595._054161.pool.root.1
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:39 boinc_task_state.xml
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas      1035 Jun  4 08:39 memory_monitor_summary.json
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas    287666 Jun  4 08:39 log.45006595._054161.job.log.tgz.1
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas      7688 Jun  4 08:39 heartbeat.json
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:39 wrapper_checkpoint.txt
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:39 boinc_mmap_file
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas      4425 Jun  4 08:40 pilotlog.txt
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas    409860 Jun  4 08:40 log.45006595._054161.job.log.1
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas       357 Jun  4 08:40 output.list
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:40 runtime_log
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas    716800 Jun  4 08:40 result.tar.gz
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 08:40 runtime_log.err
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas       651 Jun  4 08:40 HrTLDmxowg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUVnKDmEmZcrm.diag
[2025-06-04 08:40:03] -rw-r--r--. 1 boincer umatlas     22102 Jun  4 08:40 stderr.txt
[2025-06-04 08:40:03] HITS file was successfully produced:
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas 174190192 Jun  4 08:39 shared/HITS.pool.root.1
[2025-06-04 08:40:03]  *** Contents of shared directory: ***
[2025-06-04 08:40:03] total 379628
[2025-06-04 08:40:03] -rw-r--r--. 2 boincer umatlas 213299160 Jun  4 07:30 ATLAS.root_0
[2025-06-04 08:40:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:30 start_atlas.sh
[2025-06-04 08:40:03] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 07:30 input.tar.gz
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas 174190192 Jun  4 08:39 HITS.pool.root.1
[2025-06-04 08:40:03] -rw-------. 1 boincer umatlas    716800 Jun  4 08:40 result.tar.gz
08:40:04 (295529): run_atlas exited; CPU time 26377.030231
08:40:04 (295529): called boinc_finish(0)

</stderr_txt>
]]>

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