Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:14:09 (13421): wrapper (7.7.26015): starting
07:14:09 (13421): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:14:09] Arguments: --nthreads 8
[2025-06-04 07:14:09] Threads: 8
[2025-06-04 07:14:09] Checking for CVMFS
[2025-06-04 07:14:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:14:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:14:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:14:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:14:10] 2.11.2.0 5200 28708 288952 146778 3 67 18038148 18432000 13023 130560 0 149833220 99.557 126642513 41074 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 07:14:10] CVMFS is ok
[2025-06-04 07:14:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:14:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:14:10] Further information can be found at the LHC@home message board.
[2025-06-04 07:14:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:14:10] Checking for apptainer binary...
[2025-06-04 07:14:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:14:10] Running /usr/bin/apptainer --version
[2025-06-04 07:14:10] apptainer version 1.3.2-1.el7
[2025-06-04 07:14:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:14:11] c-212-5.aglt2.org
[2025-06-04 07:14:11] apptainer works
[2025-06-04 07:14:11] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:14:11] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:14:11] Starting ATLAS job with PandaID=6678365490
[2025-06-04 07:14:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:31:17]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:31:17]  scope=mc23_13p6TeV
[2025-06-04 08:31:17]  status=None
[2025-06-04 08:31:17]  status_code=0
[2025-06-04 08:31:17]  storage_token=
[2025-06-04 08:31:17]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678365490/log.45006595._054521.job.log.tgz.1
[2025-06-04 08:31:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/6f/log.45006595._054521.job.log.tgz.1
[2025-06-04 08:31:17]  workdir=None
[2025-06-04 08:31:17] ]
[2025-06-04 08:31:17] 2025-06-04 12:30:42,107 | INFO     | transferring file log.45006595._054521.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678365490/log.45006595._054521.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:31:17] 2025-06-04 12:30:42,107 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678365490/log.45006595._054521.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._054521.job
[2025-06-04 08:31:17] 2025-06-04 12:30:42,207 | INFO     | adding to output.list: log.45006595._054521.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/6f/log.45006595._054521.job.log.tg
[2025-06-04 08:31:17] 2025-06-04 12:30:42,208 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:31:17] 2025-06-04 12:30:42,208 | INFO     | summary of transferred files:
[2025-06-04 08:31:17] 2025-06-04 12:30:42,208 | INFO     |  -- lfn=log.45006595._054521.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:31:17] 2025-06-04 12:30:42,208 | INFO     | stage-out finished correctly
[2025-06-04 08:31:17] 2025-06-04 12:30:42,308 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:31:17] 2025-06-04 12:30:42,373 | INFO     | job 6678365490 has state=finished
[2025-06-04 08:31:17] 2025-06-04 12:30:42,373 | INFO     | preparing for final server update for job 6678365490 in state='finished'
[2025-06-04 08:31:17] 2025-06-04 12:30:42,373 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:31:17] 2025-06-04 12:30:42,373 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:31:17] 2025-06-04 12:30:42,373 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:31:17] 2025-06-04 12:30:42,373 | INFO     | job 6678365490 has finished - writing final server update
[2025-06-04 08:31:17] 2025-06-04 12:30:42,374 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:31:17] 2025-06-04 12:30:42,378 | INFO     | executing command: lscpu
[2025-06-04 08:31:17] 2025-06-04 12:30:42,435 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:31:17] 2025-06-04 12:30:44,355 | INFO     | monitor loop #341: job 0:6678365490 is in state 'finished'
[2025-06-04 08:31:17] 2025-06-04 12:30:44,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:31:17] 2025-06-04 12:30:46,859 | INFO     | monitor loop #342: job 0:6678365490 is in state 'finished'
[2025-06-04 08:31:17] 2025-06-04 12:30:46,860 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:31:17] 2025-06-04 12:30:49,365 | INFO     | monitor loop #343: job 0:6678365490 is in state 'finished'
[2025-06-04 08:31:17] 2025-06-04 12:30:49,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:31:17] 2025-06-04 12:30:51,871 | INFO     | monitor loop #344: job 0:6678365490 is in state 'finished'
[2025-06-04 08:31:17] 2025-06-04 12:30:51,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:31:17] 2025-06-04 12:30:54,376 | INFO     | monitor loop #345: job 0:6678365490 is in state 'finished'
[2025-06-04 08:31:17] 2025-06-04 12:30:54,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:31:17] 2025-06-04 12:30:54,428 | INFO     | PID=18250 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 08:31:17] 2025-06-04 12:30:54,428 | INFO     | .. there are 18 such processes running
[2025-06-04 08:31:17] 2025-06-04 12:30:56,745 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:31:17] 2025-06-04 12:30:56,745 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678365490/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:31:17] 2025-06-04 12:30:56,746 | INFO     | extracted standard info from prmon json
[2025-06-04 08:31:17] 2025-06-04 12:30:56,746 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:31:17] 2025-06-04 12:30:56,746 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:31:17] 2025-06-04 12:30:56,746 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:31:17] 2025-06-04 12:30:56,746 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:31:17] 2025-06-04 12:30:56,747 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:31:17] 2025-06-04 12:30:56,748 | INFO     | sum of square deviations: 97479037.0
[2025-06-04 08:31:17] 2025-06-04 12:30:56,748 | INFO     | sum of deviations: 486469906.49999994
[2025-06-04 08:31:17] 2025-06-04 12:30:56,748 | INFO     | mean x: 1749038044.5
[2025-06-04 08:31:17] 2025-06-04 12:30:56,748 | INFO     | mean y: 2475759.044117647
[2025-06-04 08:31:17] 2025-06-04 12:30:56,748 | INFO     | -- intersect: -8726112460.111738
[2025-06-04 08:31:17] 2025-06-04 12:30:56,748 | INFO     | intersect: -8726112460.111738
[2025-06-04 08:31:17] 2025-06-04 12:30:56,748 | INFO     | chi2: 0.00045227042207169997
[2025-06-04 08:31:17] 2025-06-04 12:30:56,749 | INFO     | -- intersect: -8726112460.111738
[2025-06-04 08:31:17] 2025-06-04 12:30:56,749 | INFO     | current memory leak: 4.99 B/s (using 68 data points, chi2=0.00)
[2025-06-04 08:31:17] 2025-06-04 12:30:56,749 | INFO     | ..............................
[2025-06-04 08:31:17] 2025-06-04 12:30:56,749 | INFO     | . Timing measurements:
[2025-06-04 08:31:17] 2025-06-04 12:30:56,749 | INFO     | . get job = 0 s
[2025-06-04 08:31:17] 2025-06-04 12:30:56,749 | INFO     | . initial setup = 2 s
[2025-06-04 08:31:17] 2025-06-04 12:30:56,749 | INFO     | . payload setup = 7 s
[2025-06-04 08:31:17] 2025-06-04 12:30:56,749 | INFO     | . stage-in = 0 s
[2025-06-04 08:31:17] 2025-06-04 12:30:56,749 | INFO     | . payload execution = 4545 s
[2025-06-04 08:31:17] 2025-06-04 12:30:56,750 | INFO     | . stage-out = 1 s
[2025-06-04 08:31:17] 2025-06-04 12:30:56,750 | INFO     | . log creation = 0 s
[2025-06-04 08:31:17] 2025-06-04 12:30:56,750 | INFO     | ..............................
[2025-06-04 08:31:17] 2025-06-04 12:30:57,003 | INFO     | 
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | job summary report
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | --------------------------------------------------
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | PanDA job id: 6678365490
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | task id: 45006595
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | errors: (none)
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | pilot state: finished 
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | transexitcode: 0
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | exeerrorcode: 0
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | exeerrordiag: 
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | exitcode: 0
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | exitmsg: OK
[2025-06-04 08:31:17] 2025-06-04 12:30:57,004 | INFO     | cpuconsumptiontime: 29046 s
[2025-06-04 08:31:17] 2025-06-04 12:30:57,005 | INFO     | nevents: 400
[2025-06-04 08:31:17] 2025-06-04 12:30:57,005 | INFO     | neventsw: 0
[2025-06-04 08:31:17] 2025-06-04 12:30:57,005 | INFO     | pid: 32619
[2025-06-04 08:31:17] 2025-06-04 12:30:57,005 | INFO     | pgrp: 32619
[2025-06-04 08:31:17] 2025-06-04 12:30:57,005 | INFO     | corecount: 8
[2025-06-04 08:31:17] 2025-06-04 12:30:57,005 | INFO     | event service: False
[2025-06-04 08:31:17] 2025-06-04 12:30:57,005 | INFO     | sizes: {0: 2404957, 1: 2405212, 5: 2405418, 11: 2405474, 4555: 2431422, 4559: 2440547, 4573: 2440661}
[2025-06-04 08:31:17] 2025-06-04 12:30:57,005 | INFO     | --------------------------------------------------
[2025-06-04 08:31:17] 2025-06-04 12:30:57,005 | INFO     | 
[2025-06-04 08:31:17] 2025-06-04 12:30:57,005 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 08:31:17] 2025-06-04 12:30:57,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,026 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,026 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,026 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,027 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:31:17] 2025-06-04 12:30:57,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,027 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:31:17] 2025-06-04 12:30:57,028 | INFO     | job 6678365490 has completed (purged errors)
[2025-06-04 08:31:17] 2025-06-04 12:30:57,028 | INFO     | overall cleanup function is called
[2025-06-04 08:31:17] 2025-06-04 12:30:58,034 | INFO     | --- collectZombieJob: --- 10, [32619]
[2025-06-04 08:31:17] 2025-06-04 12:30:58,035 | INFO     | zombie collector waiting for pid 32619
[2025-06-04 08:31:17] 2025-06-04 12:30:58,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:31:17] 2025-06-04 12:30:58,035 | INFO     | collected zombie processes
[2025-06-04 08:31:17] 2025-06-04 12:30:58,035 | INFO     | will attempt to kill all subprocesses of pid=32619
[2025-06-04 08:31:17] 2025-06-04 12:30:58,291 | INFO     | process IDs to be killed: [32619] (in reverse order)
[2025-06-04 08:31:17] 2025-06-04 12:30:58,395 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:31:17] 2025-06-04 12:30:58,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:31:17] 2025-06-04 12:30:58,406 | INFO     | did not find any defunct processes belonging to 32619
[2025-06-04 08:31:17] 2025-06-04 12:30:58,413 | INFO     | did not find any defunct processes belonging to 32619
[2025-06-04 08:31:17] 2025-06-04 12:30:58,414 | INFO     | ready for new job
[2025-06-04 08:31:17] 2025-06-04 12:30:58,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:31:17] 2025-06-04 12:30:58,415 | INFO     | **************************************
[2025-06-04 08:31:17] 2025-06-04 12:30:58,415 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:31:17] 2025-06-04 12:30:58,415 | INFO     | **************************************
[2025-06-04 08:31:17] 2025-06-04 12:30:58,415 | INFO     | 
[2025-06-04 08:31:17] 2025-06-04 12:30:58,419 | INFO     | architecture information:
[2025-06-04 08:31:17] 2025-06-04 12:30:58,420 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:31:17] 2025-06-04 12:30:58,437 | INFO     | cat /etc/os-release:
[2025-06-04 08:31:17] NAME="CentOS Linux"
[2025-06-04 08:31:17] VERSION="7 (Core)"
[2025-06-04 08:31:17] ID="centos"
[2025-06-04 08:31:17] ID_LIKE="rhel fedora"
[2025-06-04 08:31:17] VERSION_ID="7"
[2025-06-04 08:31:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:31:17] ANSI_COLOR="0;31"
[2025-06-04 08:31:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:31:17] HOME_URL="https://www.centos.org/"
[2025-06-04 08:31:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:31:17] 
[2025-06-04 08:31:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:31:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:31:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:31:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:31:17] 
[2025-06-04 08:31:17] 2025-06-04 12:30:58,437 | INFO     | **************************************
[2025-06-04 08:31:17] 2025-06-04 12:30:58,940 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 08:31:17] 2025-06-04 12:30:58,969 | INFO     | sufficient remaining disk space (103892910080 B)
[2025-06-04 08:31:17] 2025-06-04 12:30:58,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:31:17] 2025-06-04 12:30:58,970 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:31:17] 2025-06-04 12:30:58,970 | INFO     | update_server=False
[2025-06-04 08:31:17] 2025-06-04 12:30:58,970 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:31:17] 2025-06-04 12:30:58,970 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:31:17] 2025-06-04 12:30:58,970 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:31:17] 2025-06-04 12:30:58,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:31:17] 2025-06-04 12:30:58,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:31:17] 2025-06-04 12:30:58,999 | INFO     | all job control threads have been joined
[2025-06-04 08:31:17] 2025-06-04 12:30:59,313 | INFO     | all data control threads have been joined
[2025-06-04 08:31:17] 2025-06-04 12:30:59,398 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:31:17] 2025-06-04 12:30:59,398 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:31:17] 2025-06-04 12:30:59,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:31:17] 2025-06-04 12:30:59,398 | INFO     | will abort loop
[2025-06-04 08:31:17] 2025-06-04 12:30:59,975 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:00,005 | INFO     | [job] control thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:00,066 | INFO     | all payload control threads have been joined
[2025-06-04 08:31:17] 2025-06-04 12:31:00,109 | INFO     | [job] validate thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:00,140 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:00,172 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:00,286 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:00,319 | INFO     | [data] control thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:00,346 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:31:17] 2025-06-04 12:31:00,404 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:00,500 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:01,071 | INFO     | [payload] control thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:01,109 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:01,225 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:01,840 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:31:17] 2025-06-04 12:31:01,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:31:17] 2025-06-04 12:31:02,353 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:02,845 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:05,921 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:09,210 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:31:17] 2025-06-04 12:31:10,215 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:31:17] 2025-06-04 12:31:11,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421102532416)>', '<ExcThread(monitor, started 140420516402944)>']
[2025-06-04 08:31:17] 2025-06-04 12:31:12,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:31:17] 2025-06-04 12:31:12,050 | INFO     | [monitor] control thread has ended
[2025-06-04 08:31:17] 2025-06-04 12:31:16,929 | INFO     | all workflow threads have been joined
[2025-06-04 08:31:17] 2025-06-04 12:31:16,930 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:31:17] 2025-06-04 12:31:16,930 | INFO     | traces error code: 0
[2025-06-04 08:31:17] 2025-06-04 12:31:16,930 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:31:17] 2025-06-04 12:31:17,085 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:31:17] 2025-06-04 12:31:17,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:31:17] 2025-06-04 12:31:17,132 [wrapper] pilotpid: 18250
[2025-06-04 08:31:17] 2025-06-04 12:31:17,135 [wrapper] Pilot exit status: 0
[2025-06-04 08:31:17] 2025-06-04 12:31:17,271 [wrapper] pandaids: 6678365490
[2025-06-04 08:31:17] 2025-06-04 12:31:17,634 [wrapper] cleanup supervisor_pilot 63820 18253
[2025-06-04 08:31:17] 2025-06-04 12:31:17,637 [wrapper] Test setup, not cleaning
[2025-06-04 08:31:17] 2025-06-04 12:31:17,639 [wrapper] apfmon messages muted
[2025-06-04 08:31:17] 2025-06-04 12:31:17,641 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:31:17] 2025-06-04 12:31:17,643 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:31:17]  *** Error codes and diagnostics ***
[2025-06-04 08:31:17]     "exeErrorCode": 0,
[2025-06-04 08:31:17]     "exeErrorDiag": "",
[2025-06-04 08:31:17]     "pilotErrorCode": 0,
[2025-06-04 08:31:17]     "pilotErrorDiag": "",
[2025-06-04 08:31:17]  *** Listing of results directory ***
[2025-06-04 08:31:17] total 389228
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:35 queuedata.json
[2025-06-04 08:31:17] -rwx------ 1 boincer umatlas     37140 Jun  4 02:37 runpilot2-wrapper.sh
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:31:17] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:14 run_atlas
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:14 job.xml
[2025-06-04 08:31:17] -rw-r--r-- 2 boincer umatlas 216817229 Jun  4 07:14 EVNT.45006593._002182.pool.root.1
[2025-06-04 08:31:17] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:14 start_atlas.sh
[2025-06-04 08:31:17] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:14 shared
[2025-06-04 08:31:17] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 07:14 input.tar.gz
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:14 boinc_lockfile
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 07:14 pandaJob.out
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas    986812 Jun  4 07:14 agis_schedconf.cvmfs.json
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas   1603667 Jun  4 07:14 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:31:17] drwx------ 4 boincer umatlas      4096 Jun  4 07:14 pilot3
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas      6386 Jun  4 08:18 init_data.xml
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas 176401289 Jun  4 08:30 HITS.45006595._054521.pool.root.1
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas       529 Jun  4 08:30 boinc_task_state.xml
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas      1039 Jun  4 08:30 memory_monitor_summary.json
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas    306251 Jun  4 08:30 log.45006595._054521.job.log.tgz.1
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas        95 Jun  4 08:30 pilot_heartbeat.json
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas      7703 Jun  4 08:30 heartbeat.json
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:31 boinc_mmap_file
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:31 wrapper_checkpoint.txt
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas      4735 Jun  4 08:31 pilotlog.txt
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas    452381 Jun  4 08:31 log.45006595._054521.job.log.1
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas       357 Jun  4 08:31 output.list
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:31 runtime_log
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas    778240 Jun  4 08:31 result.tar.gz
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas       658 Jun  4 08:31 SLFMDmxvwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmusaKDm3EpEXn.diag
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 08:31 runtime_log.err
[2025-06-04 08:31:17] -rw-r--r-- 1 boincer umatlas     21926 Jun  4 08:31 stderr.txt
[2025-06-04 08:31:17] HITS file was successfully produced:
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas 176401289 Jun  4 08:30 shared/HITS.pool.root.1
[2025-06-04 08:31:17]  *** Contents of shared directory: ***
[2025-06-04 08:31:17] total 385288
[2025-06-04 08:31:17] -rw-r--r-- 2 boincer umatlas 216817229 Jun  4 07:14 ATLAS.root_0
[2025-06-04 08:31:17] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:14 start_atlas.sh
[2025-06-04 08:31:17] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 07:14 input.tar.gz
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas 176401289 Jun  4 08:30 HITS.pool.root.1
[2025-06-04 08:31:17] -rw------- 1 boincer umatlas    778240 Jun  4 08:31 result.tar.gz
08:31:19 (13421): run_atlas exited; CPU time 28934.839498
08:31:19 (13421): called boinc_finish(0)

</stderr_txt>
]]>

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