Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:53:58 (1027480): wrapper (7.7.26015): starting
07:53:58 (1027480): wrapper: running run_atlas (--nthreads 12)
[2025-06-07 07:53:58] Arguments: --nthreads 12
[2025-06-07 07:53:58] Threads: 12
[2025-06-07 07:53:58] Checking for CVMFS
[2025-06-07 07:53:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-07 07:53:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-07 07:53:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-07 07:53:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-07 07:53:58] 2.12.7.0 4773 3513 62008 146891 2 186 3092614 4096000 848 130560 0 2784853 99.991 797668 141 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-07 07:53:58] CVMFS is ok
[2025-06-07 07:53:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-07 07:53:58] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-07 07:53:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-07 07:53:58] Further information can be found at the LHC@home message board.
[2025-06-07 07:53:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-07 07:53:58] Checking for apptainer binary...
[2025-06-07 07:53:58] apptainer is not installed, using version from CVMFS
[2025-06-07 07:53:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-07 07:53:58] proliant-ml350-g6
[2025-06-07 07:53:58] apptainer works
[2025-06-07 07:53:58] Set ATHENA_PROC_NUMBER=12
[2025-06-07 07:53:58] Set ATHENA_CORE_NUMBER=12
[2025-06-07 07:53:58] Starting ATLAS job with PandaID=6678365407
[2025-06-07 07:53:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-07 12:28:06]  *** The last 200 lines of the pilot log: ***
[2025-06-07 12:28:06] 2025-06-07 12:27:52,655 | INFO     | extracted standard memory fields from prmon json
[2025-06-07 12:28:06] 2025-06-07 12:27:52,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-07 12:28:06] 2025-06-07 12:27:52,655 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-07 12:28:06] 2025-06-07 12:27:52,655 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-07 12:28:06] 2025-06-07 12:27:52,682 | INFO     | fitting pss+swap vs Time
[2025-06-07 12:28:06] 2025-06-07 12:27:52,682 | INFO     | sum of square deviations: 5968658887.0
[2025-06-07 12:28:06] 2025-06-07 12:27:52,684 | INFO     | sum of deviations: 33161347436.499996
[2025-06-07 12:28:06] 2025-06-07 12:27:52,684 | INFO     | mean x: 1749291005.5
[2025-06-07 12:28:06] 2025-06-07 12:27:52,684 | INFO     | mean y: 2641512.779850746
[2025-06-07 12:28:06] 2025-06-07 12:27:52,685 | INFO     | -- intersect: -9716266519.85638
[2025-06-07 12:28:06] 2025-06-07 12:27:52,685 | INFO     | intersect: -9716266519.85638
[2025-06-07 12:28:06] 2025-06-07 12:27:52,685 | INFO     | chi2: 2.710329597009647
[2025-06-07 12:28:06] 2025-06-07 12:27:52,690 | INFO     | sum of square deviations: 5640782972.0
[2025-06-07 12:28:06] 2025-06-07 12:27:52,691 | INFO     | sum of deviations: 50166942412.00001
[2025-06-07 12:28:06] 2025-06-07 12:27:52,692 | INFO     | mean x: 1749290853.0
[2025-06-07 12:28:06] 2025-06-07 12:27:52,692 | INFO     | mean y: 2649294.5513307983
[2025-06-07 12:28:06] 2025-06-07 12:27:52,692 | INFO     | -- intersect: -15554867085.692303
[2025-06-07 12:28:06] 2025-06-07 12:27:52,692 | INFO     | intersect: -15554867085.692303
[2025-06-07 12:28:06] 2025-06-07 12:27:52,692 | INFO     | chi2: 2.011571198175805
[2025-06-07 12:28:06] 2025-06-07 12:27:52,692 | INFO     | current chi2=2.011571198175805 (change=25.78130717403499 %)
[2025-06-07 12:28:06] 2025-06-07 12:27:52,693 | INFO     | sum of square deviations: 5325139844.5
[2025-06-07 12:28:06] 2025-06-07 12:27:52,711 | INFO     | sum of deviations: 48703229844.0
[2025-06-07 12:28:06] 2025-06-07 12:27:52,711 | INFO     | mean x: 1749290700.5
[2025-06-07 12:28:06] 2025-06-07 12:27:52,711 | INFO     | mean y: 2648587.2945736432
[2025-06-07 12:28:06] 2025-06-07 12:27:52,711 | INFO     | -- intersect: -15996200182.548895
[2025-06-07 12:28:06] 2025-06-07 12:27:52,711 | INFO     | intersect: -15996200182.548895
[2025-06-07 12:28:06] 2025-06-07 12:27:52,712 | INFO     | chi2: 2.012627331746265
[2025-06-07 12:28:06] 2025-06-07 12:27:52,712 | INFO     | current chi2=2.012627331746265 (change=-0.052502917690286345 %)
[2025-06-07 12:28:06] 2025-06-07 12:27:52,712 | INFO     | right removable region: 257
[2025-06-07 12:28:06] 2025-06-07 12:27:52,712 | INFO     | sum of square deviations: 5640782972.0
[2025-06-07 12:28:06] 2025-06-07 12:27:52,718 | INFO     | sum of deviations: -24687217463.0
[2025-06-07 12:28:06] 2025-06-07 12:27:52,719 | INFO     | mean x: 1749291158.0
[2025-06-07 12:28:06] 2025-06-07 12:27:52,719 | INFO     | mean y: 2668273.6311787074
[2025-06-07 12:28:06] 2025-06-07 12:27:52,719 | INFO     | -- intersect: 7658543608.316735
[2025-06-07 12:28:06] 2025-06-07 12:27:52,719 | INFO     | intersect: 7658543608.316735
[2025-06-07 12:28:06] 2025-06-07 12:27:52,719 | INFO     | chi2: 0.8140593077863656
[2025-06-07 12:28:06] 2025-06-07 12:27:52,719 | INFO     | current chi2=0.8140593077863656 (change=69.96456413697688 %)
[2025-06-07 12:28:06] 2025-06-07 12:27:52,720 | INFO     | sum of square deviations: 5325139844.5
[2025-06-07 12:28:06] 2025-06-07 12:27:52,730 | INFO     | sum of deviations: -27335457707.499996
[2025-06-07 12:28:06] 2025-06-07 12:27:52,730 | INFO     | mean x: 1749291310.5
[2025-06-07 12:28:06] 2025-06-07 12:27:52,730 | INFO     | mean y: 2669515.3682170543
[2025-06-07 12:28:06] 2025-06-07 12:27:52,730 | INFO     | -- intersect: 8982279447.23843
[2025-06-07 12:28:06] 2025-06-07 12:27:52,730 | INFO     | intersect: 8982279447.23843
[2025-06-07 12:28:06] 2025-06-07 12:27:52,731 | INFO     | chi2: 0.779520087655494
[2025-06-07 12:28:06] 2025-06-07 12:27:52,731 | INFO     | current chi2=0.779520087655494 (change=4.242838304348187 %)
[2025-06-07 12:28:06] 2025-06-07 12:27:52,731 | INFO     | left removable region: 20
[2025-06-07 12:28:06] 2025-06-07 12:27:52,731 | INFO     | sum of square deviations: 4127772278.0
[2025-06-07 12:28:06] 2025-06-07 12:27:52,733 | INFO     | sum of deviations: 40039728.99999866
[2025-06-07 12:28:06] 2025-06-07 12:27:52,733 | INFO     | mean x: 1749291280.0
[2025-06-07 12:28:06] 2025-06-07 12:27:52,733 | INFO     | mean y: 2672200.9029535865
[2025-06-07 12:28:06] 2025-06-07 12:27:52,733 | INFO     | -- intersect: -14296067.71170878
[2025-06-07 12:28:06] 2025-06-07 12:27:52,733 | INFO     | intersect: -14296067.71170878
[2025-06-07 12:28:06] 2025-06-07 12:27:52,746 | INFO     | chi2: 0.03724771253901632
[2025-06-07 12:28:06] 2025-06-07 12:27:52,746 | INFO     | -- intersect: -14296067.71170878
[2025-06-07 12:28:06] 2025-06-07 12:27:52,746 | INFO     | current memory leak: 0.01 B/s (using 237 data points, chi2=0.04)
[2025-06-07 12:28:06] 2025-06-07 12:27:52,747 | INFO     | ..............................
[2025-06-07 12:28:06] 2025-06-07 12:27:52,747 | INFO     | . Timing measurements:
[2025-06-07 12:28:06] 2025-06-07 12:27:52,747 | INFO     | . get job = 0 s
[2025-06-07 12:28:06] 2025-06-07 12:27:52,747 | INFO     | . initial setup = 1 s
[2025-06-07 12:28:06] 2025-06-07 12:27:52,747 | INFO     | . payload setup = 3 s
[2025-06-07 12:28:06] 2025-06-07 12:27:52,747 | INFO     | . stage-in = 0 s
[2025-06-07 12:28:06] 2025-06-07 12:27:52,747 | INFO     | . payload execution = 16317 s
[2025-06-07 12:28:06] 2025-06-07 12:27:52,747 | INFO     | . stage-out = 2 s
[2025-06-07 12:28:06] 2025-06-07 12:27:52,748 | INFO     | . log creation = 0 s
[2025-06-07 12:28:06] 2025-06-07 12:27:52,748 | INFO     | ..............................
[2025-06-07 12:28:06] 2025-06-07 12:27:53,020 | INFO     | 
[2025-06-07 12:28:06] 2025-06-07 12:27:53,020 | INFO     | job summary report
[2025-06-07 12:28:06] 2025-06-07 12:27:53,020 | INFO     | --------------------------------------------------
[2025-06-07 12:28:06] 2025-06-07 12:27:53,020 | INFO     | PanDA job id: 6678365407
[2025-06-07 12:28:06] 2025-06-07 12:27:53,020 | INFO     | task id: 45006595
[2025-06-07 12:28:06] 2025-06-07 12:27:53,020 | INFO     | errors: (none)
[2025-06-07 12:28:06] 2025-06-07 12:27:53,020 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-07 12:28:06] 2025-06-07 12:27:53,021 | INFO     | pilot state: finished 
[2025-06-07 12:28:06] 2025-06-07 12:27:53,021 | INFO     | transexitcode: 0
[2025-06-07 12:28:06] 2025-06-07 12:27:53,021 | INFO     | exeerrorcode: 0
[2025-06-07 12:28:06] 2025-06-07 12:27:53,021 | INFO     | exeerrordiag: 
[2025-06-07 12:28:06] 2025-06-07 12:27:53,021 | INFO     | exitcode: 0
[2025-06-07 12:28:06] 2025-06-07 12:27:53,021 | INFO     | exitmsg: OK
[2025-06-07 12:28:06] 2025-06-07 12:27:53,021 | INFO     | cpuconsumptiontime: 54445 s
[2025-06-07 12:28:06] 2025-06-07 12:27:53,021 | INFO     | nevents: 400
[2025-06-07 12:28:06] 2025-06-07 12:27:53,026 | INFO     | neventsw: 0
[2025-06-07 12:28:06] 2025-06-07 12:27:53,026 | INFO     | pid: 1037622
[2025-06-07 12:28:06] 2025-06-07 12:27:53,026 | INFO     | pgrp: 1037622
[2025-06-07 12:28:06] 2025-06-07 12:27:53,026 | INFO     | corecount: 12
[2025-06-07 12:28:06] 2025-06-07 12:27:53,026 | INFO     | event service: False
[2025-06-07 12:28:06] 2025-06-07 12:27:53,026 | INFO     | sizes: {0: 2397194, 1: 2397393, 2: 2397599, 11: 2397627, 16324: 2428812, 16328: 2437799, 16331: 2437983, 16416: 2438153}
[2025-06-07 12:28:06] 2025-06-07 12:27:53,026 | INFO     | --------------------------------------------------
[2025-06-07 12:28:06] 2025-06-07 12:27:53,026 | INFO     | 
[2025-06-07 12:28:06] 2025-06-07 12:27:53,027 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-06-07 12:28:06] 2025-06-07 12:27:53,074 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,074 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,074 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,074 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,074 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,075 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,075 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,075 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,076 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-07 12:28:06] 2025-06-07 12:27:53,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,076 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-07 12:28:06] 2025-06-07 12:27:53,076 | INFO     | job 6678365407 has completed (purged errors)
[2025-06-07 12:28:06] 2025-06-07 12:27:53,077 | INFO     | overall cleanup function is called
[2025-06-07 12:28:06] 2025-06-07 12:27:54,085 | INFO     | --- collectZombieJob: --- 10, [1037622]
[2025-06-07 12:28:06] 2025-06-07 12:27:54,086 | INFO     | zombie collector waiting for pid 1037622
[2025-06-07 12:28:06] 2025-06-07 12:27:54,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-07 12:28:06] 2025-06-07 12:27:54,086 | INFO     | collected zombie processes
[2025-06-07 12:28:06] 2025-06-07 12:27:54,086 | INFO     | will attempt to kill all subprocesses of pid=1037622
[2025-06-07 12:28:06] 2025-06-07 12:27:54,272 | INFO     | process IDs to be killed: [1037622] (in reverse order)
[2025-06-07 12:28:06] 2025-06-07 12:27:54,346 | WARNING  | found no corresponding commands to process id(s)
[2025-06-07 12:28:06] 2025-06-07 12:27:54,347 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-07 12:28:06] 2025-06-07 12:27:54,349 | INFO     | did not find any defunct processes belonging to 1037622
[2025-06-07 12:28:06] 2025-06-07 12:27:54,356 | INFO     | did not find any defunct processes belonging to 1037622
[2025-06-07 12:28:06] 2025-06-07 12:27:54,356 | INFO     | ready for new job
[2025-06-07 12:28:06] 2025-06-07 12:27:54,357 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-07 12:28:06] 2025-06-07 12:27:54,366 | INFO     | **************************************
[2025-06-07 12:28:06] 2025-06-07 12:27:54,366 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-07 12:28:06] 2025-06-07 12:27:54,366 | INFO     | **************************************
[2025-06-07 12:28:06] 2025-06-07 12:27:54,366 | INFO     | 
[2025-06-07 12:28:06] 2025-06-07 12:27:54,390 | INFO     | architecture information:
[2025-06-07 12:28:06] 2025-06-07 12:27:54,401 | INFO     | executing command: cat /etc/os-release
[2025-06-07 12:28:06] 2025-06-07 12:27:54,448 | INFO     | PID=1031111 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-07 12:28:06] 2025-06-07 12:27:54,448 | INFO     | .. there are 2 such processes running
[2025-06-07 12:28:06] 2025-06-07 12:27:54,450 | INFO     | cat /etc/os-release:
[2025-06-07 12:28:06] NAME="CentOS Linux"
[2025-06-07 12:28:06] VERSION="7 (Core)"
[2025-06-07 12:28:06] ID="centos"
[2025-06-07 12:28:06] ID_LIKE="rhel fedora"
[2025-06-07 12:28:06] VERSION_ID="7"
[2025-06-07 12:28:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-07 12:28:06] ANSI_COLOR="0;31"
[2025-06-07 12:28:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-07 12:28:06] HOME_URL="https://www.centos.org/"
[2025-06-07 12:28:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-07 12:28:06] 
[2025-06-07 12:28:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-07 12:28:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-07 12:28:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-07 12:28:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-07 12:28:06] 
[2025-06-07 12:28:06] 2025-06-07 12:27:54,450 | INFO     | **************************************
[2025-06-07 12:28:06] 2025-06-07 12:27:54,954 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-06-07 12:28:06] 2025-06-07 12:27:54,994 | INFO     | sufficient remaining disk space (166057738240 B)
[2025-06-07 12:28:06] 2025-06-07 12:27:54,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-07 12:28:06] 2025-06-07 12:27:54,994 | INFO     | current server update state: UPDATING_FINAL
[2025-06-07 12:28:06] 2025-06-07 12:27:54,994 | INFO     | update_server=False
[2025-06-07 12:28:06] 2025-06-07 12:27:54,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-07 12:28:06] 2025-06-07 12:27:54,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-07 12:28:06] 2025-06-07 12:27:54,997 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-07 12:28:06] 2025-06-07 12:27:54,998 | INFO     | found 0 job(s) in 20 queues
[2025-06-07 12:28:06] 2025-06-07 12:27:54,998 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-07 12:28:06] 2025-06-07 12:27:54,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-07 12:28:06] 2025-06-07 12:27:55,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-07 12:28:06] 2025-06-07 12:27:55,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-07 12:28:06] 2025-06-07 12:27:55,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-07 12:28:06] 2025-06-07 12:27:55,818 | INFO     | aborting loop
[2025-06-07 12:28:06] 2025-06-07 12:27:55,905 | INFO     | all data control threads have been joined
[2025-06-07 12:28:06] 2025-06-07 12:27:56,002 | INFO     | [job] retrieve thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:56,002 | INFO     | [job] queue monitor thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:56,270 | INFO     | [payload] execute_payloads thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:56,377 | INFO     | all job control threads have been joined
[2025-06-07 12:28:06] 2025-06-07 12:27:56,493 | INFO     | all payload control threads have been joined
[2025-06-07 12:28:06] 2025-06-07 12:27:56,498 | INFO     | [payload] validate_post thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:56,554 | INFO     | [job] validate thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:56,714 | INFO     | [job] create_data_payload thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:56,726 | INFO     | [payload] validate_pre thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:56,726 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:56,826 | INFO     | [job] job monitor thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:56,914 | INFO     | [data] control thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:56,918 | INFO     | [payload] failed_post thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:57,150 | INFO     | [data] copytool_in thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:57,358 | INFO     | [data] copytool_out thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:57,382 | INFO     | [job] control thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:57,498 | INFO     | [payload] control thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:27:59,166 | INFO     | [data] queue_monitor thread has finished
[2025-06-07 12:28:06] 2025-06-07 12:28:00,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459370665792)>', '<ExcThread(monitor, started 140458701346560)>']
[2025-06-07 12:28:06] 2025-06-07 12:28:01,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-07 12:28:06] 2025-06-07 12:28:01,046 | INFO     | [monitor] control thread has ended
[2025-06-07 12:28:06] 2025-06-07 12:28:05,169 | INFO     | all workflow threads have been joined
[2025-06-07 12:28:06] 2025-06-07 12:28:05,170 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-07 12:28:06] 2025-06-07 12:28:05,170 | INFO     | traces error code: 0
[2025-06-07 12:28:06] 2025-06-07 12:28:05,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-07 12:28:06] 2025-06-07 12:28:05,398 [wrapper] ==== pilot stdout END ====
[2025-06-07 12:28:06] 2025-06-07 12:28:05,427 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-07 12:28:06] 2025-06-07 12:28:05,474 [wrapper] pilotpid: 1031111
[2025-06-07 12:28:06] 2025-06-07 12:28:05,526 [wrapper] Pilot exit status: 0
[2025-06-07 12:28:06] 2025-06-07 12:28:05,662 [wrapper] pandaids: 6678365407
[2025-06-07 12:28:06] 2025-06-07 12:28:05,747 [wrapper] cleanup supervisor_pilot 1080266 1031112
[2025-06-07 12:28:06] 2025-06-07 12:28:05,762 [wrapper] Test setup, not cleaning
[2025-06-07 12:28:06] 2025-06-07 12:28:05,790 [wrapper] apfmon messages muted
[2025-06-07 12:28:06] 2025-06-07 12:28:05,811 [wrapper] ==== wrapper stdout END ====
[2025-06-07 12:28:06] 2025-06-07 12:28:05,831 [wrapper] ==== wrapper stderr END ====
[2025-06-07 12:28:06]  *** Error codes and diagnostics ***
[2025-06-07 12:28:06]     "exeErrorCode": 0,
[2025-06-07 12:28:06]     "exeErrorDiag": "",
[2025-06-07 12:28:06]     "pilotErrorCode": 0,
[2025-06-07 12:28:06]     "pilotErrorDiag": "",
[2025-06-07 12:28:06]  *** Listing of results directory ***
[2025-06-07 12:28:06] total 400152
[2025-06-07 12:28:06] -rw-r--r-- 1 boinc boinc    495897 Jun  4 05:59 pilot3.tar.gz
[2025-06-07 12:28:06] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:35 queuedata.json
[2025-06-07 12:28:06] -rwx------ 1 boinc boinc     37140 Jun  4 06:36 runpilot2-wrapper.sh
[2025-06-07 12:28:06] -rw-rw-r-- 1 boinc boinc       100 Jun  7 07:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-07 12:28:06] -rwxr-xr-x 1 boinc boinc      7986 Jun  7 07:53 run_atlas
[2025-06-07 12:28:06] -rw-rw-r-- 1 boinc boinc       105 Jun  7 07:53 job.xml
[2025-06-07 12:28:06] -rw-rw-r-- 1 boinc boinc      9277 Jun  7 07:53 init_data.xml
[2025-06-07 12:28:06] -rw-r--r-- 2 boinc boinc 215914233 Jun  7 07:53 EVNT.45006593._002179.pool.root.1
[2025-06-07 12:28:06] -rw-r--r-- 2 boinc boinc     15093 Jun  7 07:53 start_atlas.sh
[2025-06-07 12:28:06] drwxrwx--x 2 boinc boinc      4096 Jun  7 07:53 shared
[2025-06-07 12:28:06] -rw-r--r-- 2 boinc boinc    508887 Jun  7 07:53 input.tar.gz
[2025-06-07 12:28:06] -rw-rw-r-- 1 boinc boinc         0 Jun  7 07:53 boinc_lockfile
[2025-06-07 12:28:06] -rw-rw-r-- 1 boinc boinc      2525 Jun  7 07:53 pandaJob.out
[2025-06-07 12:28:06] -rw------- 1 boinc boinc    985740 Jun  7 07:54 agis_schedconf.cvmfs.json
[2025-06-07 12:28:06] drwx------ 4 boinc boinc      4096 Jun  7 07:54 pilot3
[2025-06-07 12:28:06] -rw------- 1 boinc boinc 186003189 Jun  7 12:25 HITS.45006595._054438.pool.root.1
[2025-06-07 12:28:06] -rw-rw-r-- 1 boinc boinc       530 Jun  7 12:25 boinc_task_state.xml
[2025-06-07 12:28:06] -rw------- 1 boinc boinc      1021 Jun  7 12:26 memory_monitor_summary.json
[2025-06-07 12:28:06] -rw------- 1 boinc boinc   1598969 Jun  7 12:26 agis_ddmendpoints.agis.ALL.json
[2025-06-07 12:28:06] -rw------- 1 boinc boinc    456684 Jun  7 12:26 log.45006595._054438.job.log.tgz.1
[2025-06-07 12:28:06] -rw------- 1 boinc boinc        95 Jun  7 12:27 pilot_heartbeat.json
[2025-06-07 12:28:06] -rw------- 1 boinc boinc      7676 Jun  7 12:27 heartbeat.json
[2025-06-07 12:28:06] -rw-rw-r-- 1 boinc boinc      8192 Jun  7 12:27 boinc_mmap_file
[2025-06-07 12:28:06] -rw-rw-r-- 1 boinc boinc        28 Jun  7 12:28 wrapper_checkpoint.txt
[2025-06-07 12:28:06] -rw------- 1 boinc boinc      4894 Jun  7 12:28 pilotlog.txt
[2025-06-07 12:28:06] -rw------- 1 boinc boinc   1544394 Jun  7 12:28 log.45006595._054438.job.log.1
[2025-06-07 12:28:06] -rw------- 1 boinc boinc       357 Jun  7 12:28 output.list
[2025-06-07 12:28:06] -rw-rw-r-- 1 boinc boinc       620 Jun  7 12:28 runtime_log
[2025-06-07 12:28:06] -rw------- 1 boinc boinc   2017280 Jun  7 12:28 result.tar.gz
[2025-06-07 12:28:06] -rw-rw-r-- 1 boinc boinc      9009 Jun  7 12:28 runtime_log.err
[2025-06-07 12:28:06] -rw------- 1 boinc boinc       665 Jun  7 12:28 MFAODmouwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWYnKDmQIgKAo.diag
[2025-06-07 12:28:06] -rw-rw-r-- 1 boinc boinc     21076 Jun  7 12:28 stderr.txt
[2025-06-07 12:28:06] HITS file was successfully produced:
[2025-06-07 12:28:06] -rw------- 1 boinc boinc 186003189 Jun  7 12:25 shared/HITS.pool.root.1
[2025-06-07 12:28:06]  *** Contents of shared directory: ***
[2025-06-07 12:28:06] total 394996
[2025-06-07 12:28:06] -rw-r--r-- 2 boinc boinc 215914233 Jun  7 07:53 ATLAS.root_0
[2025-06-07 12:28:06] -rw-r--r-- 2 boinc boinc     15093 Jun  7 07:53 start_atlas.sh
[2025-06-07 12:28:06] -rw-r--r-- 2 boinc boinc    508887 Jun  7 07:53 input.tar.gz
[2025-06-07 12:28:06] -rw------- 1 boinc boinc 186003189 Jun  7 12:25 HITS.pool.root.1
[2025-06-07 12:28:06] -rw------- 1 boinc boinc   2017280 Jun  7 12:28 result.tar.gz
12:28:08 (1027480): run_atlas exited; CPU time 54581.425351
12:28:08 (1027480): called boinc_finish(0)

</stderr_txt>
]]>

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