Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:31:48 (24270): wrapper (7.7.26015): starting
10:31:48 (24270): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 10:31:48] Arguments: --nthreads 12
[2025-06-04 10:31:48] Threads: 12
[2025-06-04 10:31:48] Checking for CVMFS
[2025-06-04 10:31:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:31:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:31:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:31:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:31:48] 2.10.0.0 29567 2693 114700 146786 2 56 15195753 16777216 922 130560 0 10942734 99.998 699103 7397 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-04 10:31:48] CVMFS is ok
[2025-06-04 10:31:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:31:48] Checking for apptainer binary...
[2025-06-04 10:31:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:31:48] Running /usr/bin/apptainer --version
[2025-06-04 10:31:48] apptainer version 1.3.6-150600.4.9.1
[2025-06-04 10:31:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:31:48] boinc-runner
[2025-06-04 10:31:48] apptainer works
[2025-06-04 10:31:48] Set ATHENA_PROC_NUMBER=12
[2025-06-04 10:31:48] Set ATHENA_CORE_NUMBER=12
[2025-06-04 10:31:48] Starting ATLAS job with PandaID=6678364552
[2025-06-04 10:31:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:01:08]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:01:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:01:08]  replicas=None
[2025-06-04 11:01:08]  scope=mc23_13p6TeV
[2025-06-04 11:01:08]  status=None
[2025-06-04 11:01:08]  status_code=0
[2025-06-04 11:01:08]  storage_token=
[2025-06-04 11:01:08]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6678364552/log.45006595._054036.job.log.tgz.1
[2025-06-04 11:01:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/e7/log.45006595._054036.job.log.tgz.1
[2025-06-04 11:01:08]  workdir=None
[2025-06-04 11:01:08] ]
[2025-06-04 11:01:08] 2025-06-04 16:00:39,937 | INFO     | transferring file log.45006595._054036.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6678364552/log.45006595._054036.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 11:01:08] 2025-06-04 16:00:39,937 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6678364552/log.45006595._054036.job.log.tgz.1 /var/lib/boinc/slots/1/log.45006595._054036.job
[2025-06-04 11:01:08] 2025-06-04 16:00:39,951 | INFO     | adding to output.list: log.45006595._054036.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/e7/log.45006595._054036.job.log.tg
[2025-06-04 11:01:08] 2025-06-04 16:00:39,952 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:01:08] 2025-06-04 16:00:39,952 | INFO     | summary of transferred files:
[2025-06-04 11:01:08] 2025-06-04 16:00:39,952 | INFO     |  -- lfn=log.45006595._054036.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:01:08] 2025-06-04 16:00:39,952 | INFO     | stage-out finished correctly
[2025-06-04 11:01:08] 2025-06-04 16:00:39,966 | INFO     | monitor loop #136: job 0:6678364552 is in state 'finished'
[2025-06-04 11:01:08] 2025-06-04 16:00:39,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:01:08] 2025-06-04 16:00:40,966 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:01:08] 2025-06-04 16:00:42,499 | INFO     | monitor loop #137: job 0:6678364552 is in state 'finished'
[2025-06-04 11:01:08] 2025-06-04 16:00:42,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:01:08] 2025-06-04 16:00:43,544 | INFO     | job 6678364552 has state=finished
[2025-06-04 11:01:08] 2025-06-04 16:00:43,544 | INFO     | preparing for final server update for job 6678364552 in state='finished'
[2025-06-04 11:01:08] 2025-06-04 16:00:43,544 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:01:08] 2025-06-04 16:00:43,544 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:01:08] 2025-06-04 16:00:43,544 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:01:08] 2025-06-04 16:00:43,545 | INFO     | job 6678364552 has finished - writing final server update
[2025-06-04 11:01:08] 2025-06-04 16:00:43,545 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:01:08] 2025-06-04 16:00:43,546 | INFO     | executing command: lscpu
[2025-06-04 11:01:08] 2025-06-04 16:00:43,567 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:01:08] 2025-06-04 16:00:45,002 | INFO     | monitor loop #138: job 0:6678364552 is in state 'finished'
[2025-06-04 11:01:08] 2025-06-04 16:00:45,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:01:08] 2025-06-04 16:00:45,366 | INFO     | PID=28106 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 11:01:08] 2025-06-04 16:00:45,367 | INFO     | .. there are 2 such processes running
[2025-06-04 11:01:08] 2025-06-04 16:00:47,505 | INFO     | monitor loop #139: job 0:6678364552 is in state 'finished'
[2025-06-04 11:01:08] 2025-06-04 16:00:47,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:01:08] 2025-06-04 16:00:48,124 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:01:08] 2025-06-04 16:00:48,125 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6678364552/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:01:08] 2025-06-04 16:00:48,125 | INFO     | extracted standard info from prmon json
[2025-06-04 11:01:08] 2025-06-04 16:00:48,125 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:01:08] 2025-06-04 16:00:48,125 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:01:08] 2025-06-04 16:00:48,125 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:01:08] 2025-06-04 16:00:48,125 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:01:08] 2025-06-04 16:00:48,126 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:01:08] 2025-06-04 16:00:48,126 | INFO     | sum of square deviations: 2865170.0
[2025-06-04 11:01:08] 2025-06-04 16:00:48,126 | INFO     | sum of deviations: 70367403.99999999
[2025-06-04 11:01:08] 2025-06-04 16:00:48,126 | INFO     | mean x: 1749052050.0
[2025-06-04 11:01:08] 2025-06-04 16:00:48,126 | INFO     | mean y: 2920071.9523809524
[2025-06-04 11:01:08] 2025-06-04 16:00:48,126 | INFO     | -- intersect: -42953083313.31906
[2025-06-04 11:01:08] 2025-06-04 16:00:48,126 | INFO     | intersect: -42953083313.31906
[2025-06-04 11:01:08] 2025-06-04 16:00:48,126 | INFO     | chi2: 5.862428714597366e-06
[2025-06-04 11:01:08] 2025-06-04 16:00:48,126 | INFO     | -- intersect: -42953083313.31906
[2025-06-04 11:01:08] 2025-06-04 16:00:48,126 | INFO     | current memory leak: 24.56 B/s (using 21 data points, chi2=0.00)
[2025-06-04 11:01:08] 2025-06-04 16:00:48,127 | INFO     | ..............................
[2025-06-04 11:01:08] 2025-06-04 16:00:48,127 | INFO     | . Timing measurements:
[2025-06-04 11:01:08] 2025-06-04 16:00:48,127 | INFO     | . get job = 0 s
[2025-06-04 11:01:08] 2025-06-04 16:00:48,127 | INFO     | . initial setup = 3 s
[2025-06-04 11:01:08] 2025-06-04 16:00:48,127 | INFO     | . payload setup = 3 s
[2025-06-04 11:01:08] 2025-06-04 16:00:48,127 | INFO     | . stage-in = 0 s
[2025-06-04 11:01:08] 2025-06-04 16:00:48,127 | INFO     | . payload execution = 1703 s
[2025-06-04 11:01:08] 2025-06-04 16:00:48,127 | INFO     | . stage-out = 0 s
[2025-06-04 11:01:08] 2025-06-04 16:00:48,127 | INFO     | . log creation = 0 s
[2025-06-04 11:01:08] 2025-06-04 16:00:48,127 | INFO     | ..............................
[2025-06-04 11:01:08] 2025-06-04 16:00:48,169 | INFO     | 
[2025-06-04 11:01:08] 2025-06-04 16:00:48,169 | INFO     | job summary report
[2025-06-04 11:01:08] 2025-06-04 16:00:48,169 | INFO     | --------------------------------------------------
[2025-06-04 11:01:08] 2025-06-04 16:00:48,169 | INFO     | PanDA job id: 6678364552
[2025-06-04 11:01:08] 2025-06-04 16:00:48,169 | INFO     | task id: 45006595
[2025-06-04 11:01:08] 2025-06-04 16:00:48,169 | INFO     | errors: (none)
[2025-06-04 11:01:08] 2025-06-04 16:00:48,169 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:01:08] 2025-06-04 16:00:48,169 | INFO     | pilot state: finished 
[2025-06-04 11:01:08] 2025-06-04 16:00:48,169 | INFO     | transexitcode: 0
[2025-06-04 11:01:08] 2025-06-04 16:00:48,169 | INFO     | exeerrorcode: 0
[2025-06-04 11:01:08] 2025-06-04 16:00:48,169 | INFO     | exeerrordiag: 
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | exitcode: 0
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | exitmsg: OK
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | cpuconsumptiontime: 18491 s
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | nevents: 400
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | neventsw: 0
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | pid: 2769
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | pgrp: 2769
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | corecount: 12
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | event service: False
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | sizes: {0: 2397340, 2: 2397546, 11: 2397574, 1710: 2422387, 1711: 2431328, 1712: 2431384, 1719: 2431682}
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | --------------------------------------------------
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | 
[2025-06-04 11:01:08] 2025-06-04 16:00:48,170 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-04 11:01:08] 2025-06-04 16:00:48,180 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,180 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,180 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,180 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,180 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,180 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,180 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,180 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,180 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,181 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:01:08] 2025-06-04 16:00:48,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,181 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:01:08] 2025-06-04 16:00:48,181 | INFO     | job 6678364552 has completed (purged errors)
[2025-06-04 11:01:08] 2025-06-04 16:00:48,181 | INFO     | overall cleanup function is called
[2025-06-04 11:01:08] 2025-06-04 16:00:49,189 | INFO     | --- collectZombieJob: --- 10, [2769]
[2025-06-04 11:01:08] 2025-06-04 16:00:49,189 | INFO     | zombie collector waiting for pid 2769
[2025-06-04 11:01:08] 2025-06-04 16:00:49,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:01:08] 2025-06-04 16:00:49,189 | INFO     | collected zombie processes
[2025-06-04 11:01:08] 2025-06-04 16:00:49,189 | INFO     | will attempt to kill all subprocesses of pid=2769
[2025-06-04 11:01:08] 2025-06-04 16:00:49,231 | INFO     | process IDs to be killed: [2769] (in reverse order)
[2025-06-04 11:01:08] 2025-06-04 16:00:49,259 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:01:08] 2025-06-04 16:00:49,260 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:01:08] 2025-06-04 16:00:49,262 | INFO     | did not find any defunct processes belonging to 2769
[2025-06-04 11:01:08] 2025-06-04 16:00:49,264 | INFO     | did not find any defunct processes belonging to 2769
[2025-06-04 11:01:08] 2025-06-04 16:00:49,264 | INFO     | ready for new job
[2025-06-04 11:01:08] 2025-06-04 16:00:49,264 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:01:08] 2025-06-04 16:00:49,265 | INFO     | **************************************
[2025-06-04 11:01:08] 2025-06-04 16:00:49,265 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:01:08] 2025-06-04 16:00:49,265 | INFO     | **************************************
[2025-06-04 11:01:08] 2025-06-04 16:00:49,265 | INFO     | 
[2025-06-04 11:01:08] 2025-06-04 16:00:49,266 | INFO     | architecture information:
[2025-06-04 11:01:08] 2025-06-04 16:00:49,266 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:01:08] 2025-06-04 16:00:49,277 | INFO     | cat /etc/os-release:
[2025-06-04 11:01:08] NAME="CentOS Linux"
[2025-06-04 11:01:08] VERSION="7 (Core)"
[2025-06-04 11:01:08] ID="centos"
[2025-06-04 11:01:08] ID_LIKE="rhel fedora"
[2025-06-04 11:01:08] VERSION_ID="7"
[2025-06-04 11:01:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:01:08] ANSI_COLOR="0;31"
[2025-06-04 11:01:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:01:08] HOME_URL="https://www.centos.org/"
[2025-06-04 11:01:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:01:08] 
[2025-06-04 11:01:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:01:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:01:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:01:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:01:08] 
[2025-06-04 11:01:08] 2025-06-04 16:00:49,277 | INFO     | **************************************
[2025-06-04 11:01:08] 2025-06-04 16:00:49,780 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-04 11:01:08] 2025-06-04 16:00:49,790 | INFO     | sufficient remaining disk space (3889105469440 B)
[2025-06-04 11:01:08] 2025-06-04 16:00:49,790 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:01:08] 2025-06-04 16:00:49,790 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:01:08] 2025-06-04 16:00:49,790 | INFO     | update_server=False
[2025-06-04 11:01:08] 2025-06-04 16:00:49,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:01:08] 2025-06-04 16:00:49,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:01:08] 2025-06-04 16:00:49,790 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:01:08] 2025-06-04 16:00:49,790 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:01:08] 2025-06-04 16:00:49,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:01:08] 2025-06-04 16:00:49,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:01:08] 2025-06-04 16:00:50,008 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:01:08] 2025-06-04 16:00:50,008 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:01:08] 2025-06-04 16:00:50,008 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:01:08] 2025-06-04 16:00:50,008 | INFO     | will abort loop
[2025-06-04 11:01:08] 2025-06-04 16:00:50,073 | INFO     | all job control threads have been joined
[2025-06-04 11:01:08] 2025-06-04 16:00:50,202 | INFO     | all data control threads have been joined
[2025-06-04 11:01:08] 2025-06-04 16:00:50,507 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:01:08] 2025-06-04 16:00:50,794 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:50,795 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:51,010 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:51,043 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:51,066 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:51,078 | INFO     | [job] control thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:51,121 | INFO     | all payload control threads have been joined
[2025-06-04 11:01:08] 2025-06-04 16:00:51,206 | INFO     | [data] control thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:51,491 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:51,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:01:08] 2025-06-04 16:00:51,782 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:51,838 | INFO     | [job] validate thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:51,862 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:52,126 | INFO     | [payload] control thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:52,142 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:52,510 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:55,526 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:00:59,874 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:01:08] 2025-06-04 16:01:00,878 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:01:08] 2025-06-04 16:01:02,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273758398272)>', '<ExcThread(monitor, started 140273271162624)>']
[2025-06-04 11:01:08] 2025-06-04 16:01:03,847 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:01:08] 2025-06-04 16:01:03,847 | INFO     | [monitor] control thread has ended
[2025-06-04 11:01:08] 2025-06-04 16:01:07,950 | INFO     | all workflow threads have been joined
[2025-06-04 11:01:08] 2025-06-04 16:01:07,950 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:01:08] 2025-06-04 16:01:07,950 | INFO     | traces error code: 0
[2025-06-04 11:01:08] 2025-06-04 16:01:07,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:01:08] 2025-06-04 16:01:08,015 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:01:08] 2025-06-04 16:01:08,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:01:08] 2025-06-04 16:01:08,018 [wrapper] pilotpid: 28106
[2025-06-04 11:01:08] 2025-06-04 16:01:08,020 [wrapper] Pilot exit status: 0
[2025-06-04 11:01:08] 2025-06-04 16:01:08,025 [wrapper] pandaids: 6678364552
[2025-06-04 11:01:08] 2025-06-04 16:01:08,042 [wrapper] cleanup supervisor_pilot  5980 28107
[2025-06-04 11:01:08] 2025-06-04 16:01:08,043 [wrapper] Test setup, not cleaning
[2025-06-04 11:01:08] 2025-06-04 16:01:08,044 [wrapper] apfmon messages muted
[2025-06-04 11:01:08] 2025-06-04 16:01:08,045 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:01:08] 2025-06-04 16:01:08,047 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:01:08]  *** Error codes and diagnostics ***
[2025-06-04 11:01:08]     "exeErrorCode": 0,
[2025-06-04 11:01:08]     "exeErrorDiag": "",
[2025-06-04 11:01:08]     "pilotErrorCode": 0,
[2025-06-04 11:01:08]     "pilotErrorDiag": "",
[2025-06-04 11:01:08]  *** Listing of results directory ***
[2025-06-04 11:01:08] total 402264
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc    495897 Jun  4 00:59 pilot3.tar.gz
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:26 queuedata.json
[2025-06-04 11:01:08] -rwx------ 1 boinc boinc     37140 Jun  4 01:26 runpilot2-wrapper.sh
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc       100 Jun  4 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:01:08] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 10:31 run_atlas
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc       105 Jun  4 10:31 job.xml
[2025-06-04 11:01:08] -rw-r--r-- 2 boinc boinc 218117560 Jun  4 10:31 EVNT.45006593._002163.pool.root.1
[2025-06-04 11:01:08] -rw-r--r-- 2 boinc boinc     15093 Jun  4 10:31 start_atlas.sh
[2025-06-04 11:01:08] drwxrwx--x 1 boinc boinc        76 Jun  4 10:31 shared
[2025-06-04 11:01:08] -rw-r--r-- 2 boinc boinc    508881 Jun  4 10:31 input.tar.gz
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc     10044 Jun  4 10:31 init_data.xml
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc         0 Jun  4 10:31 boinc_lockfile
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc      2524 Jun  4 10:31 pandaJob.out
[2025-06-04 11:01:08] -rw------- 1 boinc boinc    990989 Jun  4 10:31 agis_schedconf.cvmfs.json
[2025-06-04 11:01:08] -rw------- 1 boinc boinc   1598969 Jun  4 10:31 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:01:08] drwx------ 1 boinc boinc       368 Jun  4 10:31 pilot3
[2025-06-04 11:01:08] -rw------- 1 boinc boinc        95 Jun  4 11:00 pilot_heartbeat.json
[2025-06-04 11:01:08] -rw------- 1 boinc boinc 188925800 Jun  4 11:00 HITS.45006595._054036.pool.root.1
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc       529 Jun  4 11:00 boinc_task_state.xml
[2025-06-04 11:01:08] -rw------- 1 boinc boinc      1024 Jun  4 11:00 memory_monitor_summary.json
[2025-06-04 11:01:08] -rw------- 1 boinc boinc    321214 Jun  4 11:00 log.45006595._054036.job.log.tgz.1
[2025-06-04 11:01:08] -rw------- 1 boinc boinc      7674 Jun  4 11:00 heartbeat.json
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc      8192 Jun  4 11:01 boinc_mmap_file
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc        27 Jun  4 11:01 wrapper_checkpoint.txt
[2025-06-04 11:01:08] -rw------- 1 boinc boinc      4736 Jun  4 11:01 pilotlog.txt
[2025-06-04 11:01:08] -rw------- 1 boinc boinc    205502 Jun  4 11:01 log.45006595._054036.job.log.1
[2025-06-04 11:01:08] -rw------- 1 boinc boinc       357 Jun  4 11:01 output.list
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc       620 Jun  4 11:01 runtime_log
[2025-06-04 11:01:08] -rw------- 1 boinc boinc    542720 Jun  4 11:01 result.tar.gz
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc      8683 Jun  4 11:01 runtime_log.err
[2025-06-04 11:01:08] -rw------- 1 boinc boinc       652 Jun  4 11:01 DRSLDm3kwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpqaKDmTHvYjm.diag
[2025-06-04 11:01:08] -rw-r--r-- 1 boinc boinc     21550 Jun  4 11:01 stderr.txt
[2025-06-04 11:01:08] HITS file was successfully produced:
[2025-06-04 11:01:08] -rw------- 1 boinc boinc 188925800 Jun  4 11:00 shared/HITS.pool.root.1
[2025-06-04 11:01:08]  *** Contents of shared directory: ***
[2025-06-04 11:01:08] total 398556
[2025-06-04 11:01:08] -rw-r--r-- 2 boinc boinc 218117560 Jun  4 10:31 ATLAS.root_0
[2025-06-04 11:01:08] -rw-r--r-- 2 boinc boinc     15093 Jun  4 10:31 start_atlas.sh
[2025-06-04 11:01:08] -rw-r--r-- 2 boinc boinc    508881 Jun  4 10:31 input.tar.gz
[2025-06-04 11:01:08] -rw------- 1 boinc boinc 188925800 Jun  4 11:00 HITS.pool.root.1
[2025-06-04 11:01:08] -rw------- 1 boinc boinc    542720 Jun  4 11:01 result.tar.gz
11:01:09 (24270): run_atlas exited; CPU time 18499.016661
11:01:09 (24270): called boinc_finish(0)

</stderr_txt>
]]>

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