Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:02:01 (2118609): wrapper (7.7.26015): starting
08:02:01 (2118609): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:02:01] Arguments: --nthreads 12
[2025-06-04 08:02:01] Threads: 12
[2025-06-04 08:02:01] Checking for CVMFS
[2025-06-04 08:02:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:02:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:02:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:02:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:02:01] 2.12.6.0 5181 740 118888 146779 0 401 27942467 32935937 7810 16776704 0 4822058 99.624 3840515 29214 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:02:01] CVMFS is ok
[2025-06-04 08:02:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:02:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:02:01] Further information can be found at the LHC@home message board.
[2025-06-04 08:02:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:02:01] Checking for apptainer binary...
[2025-06-04 08:02:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:02:01] Running /usr/bin/apptainer --version
[2025-06-04 08:02:01] apptainer version 1.4.1-1.el9
[2025-06-04 08:02:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:02:02] c6-1-24-3.aglt2.org
[2025-06-04 08:02:02] apptainer works
[2025-06-04 08:02:02] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:02:02] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:02:02] Starting ATLAS job with PandaID=6678365293
[2025-06-04 08:02:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:56:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:56:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:56:07]  is_altstaged=None
[2025-06-04 08:56:07]  is_tar=False
[2025-06-04 08:56:07]  lfn=log.45006595._054324.job.log.tgz.1
[2025-06-04 08:56:07]  mtime=0
[2025-06-04 08:56:07]  protocol_id=None
[2025-06-04 08:56:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:56:07]  replicas=None
[2025-06-04 08:56:07]  scope=mc23_13p6TeV
[2025-06-04 08:56:07]  status=None
[2025-06-04 08:56:07]  status_code=0
[2025-06-04 08:56:07]  storage_token=
[2025-06-04 08:56:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678365293/log.45006595._054324.job.log.tgz.1
[2025-06-04 08:56:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/ce/log.45006595._054324.job.log.tgz.1
[2025-06-04 08:56:07]  workdir=None
[2025-06-04 08:56:07] ]
[2025-06-04 08:56:07] 2025-06-04 12:55:42,572 | INFO     | transferring file log.45006595._054324.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678365293/log.45006595._054324.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:56:07] 2025-06-04 12:55:42,572 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678365293/log.45006595._054324.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054324.job
[2025-06-04 08:56:07] 2025-06-04 12:55:42,589 | INFO     | adding to output.list: log.45006595._054324.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/ce/log.45006595._054324.job.log.tg
[2025-06-04 08:56:07] 2025-06-04 12:55:42,590 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:56:07] 2025-06-04 12:55:42,590 | INFO     | summary of transferred files:
[2025-06-04 08:56:07] 2025-06-04 12:55:42,591 | INFO     |  -- lfn=log.45006595._054324.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:56:07] 2025-06-04 12:55:42,591 | INFO     | stage-out finished correctly
[2025-06-04 08:56:07] 2025-06-04 12:55:44,113 | INFO     | monitor loop #243: job 0:6678365293 is in state 'finished'
[2025-06-04 08:56:07] 2025-06-04 12:55:44,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:56:07] 2025-06-04 12:55:45,224 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:56:07] 2025-06-04 12:55:46,617 | INFO     | monitor loop #244: job 0:6678365293 is in state 'finished'
[2025-06-04 08:56:07] 2025-06-04 12:55:46,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:56:07] 2025-06-04 12:55:47,244 | INFO     | job 6678365293 has state=finished
[2025-06-04 08:56:07] 2025-06-04 12:55:47,245 | INFO     | preparing for final server update for job 6678365293 in state='finished'
[2025-06-04 08:56:07] 2025-06-04 12:55:47,246 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:56:07] 2025-06-04 12:55:47,246 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:56:07] 2025-06-04 12:55:47,246 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:56:07] 2025-06-04 12:55:47,246 | INFO     | job 6678365293 has finished - writing final server update
[2025-06-04 08:56:07] 2025-06-04 12:55:47,246 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:56:07] 2025-06-04 12:55:47,263 | INFO     | executing command: lscpu
[2025-06-04 08:56:07] 2025-06-04 12:55:47,325 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:56:07] 2025-06-04 12:55:49,121 | INFO     | monitor loop #245: job 0:6678365293 is in state 'finished'
[2025-06-04 08:56:07] 2025-06-04 12:55:49,121 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:56:07] 2025-06-04 12:55:50,619 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:56:07] 2025-06-04 12:55:50,619 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678365293/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:56:07] 2025-06-04 12:55:50,620 | INFO     | extracted standard info from prmon json
[2025-06-04 08:56:07] 2025-06-04 12:55:50,620 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:56:07] 2025-06-04 12:55:50,621 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:56:07] 2025-06-04 12:55:50,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:56:07] 2025-06-04 12:55:50,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:56:07] 2025-06-04 12:55:50,623 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:56:07] 2025-06-04 12:55:50,624 | INFO     | sum of square deviations: 30168007.5
[2025-06-04 08:56:07] 2025-06-04 12:55:50,624 | INFO     | sum of deviations: 2676355449.5
[2025-06-04 08:56:07] 2025-06-04 12:55:50,624 | INFO     | mean x: 1749040235.5
[2025-06-04 08:56:07] 2025-06-04 12:55:50,624 | INFO     | mean y: 2381937.282608696
[2025-06-04 08:56:07] 2025-06-04 12:55:50,624 | INFO     | -- intersect: -155163761059.57217
[2025-06-04 08:56:07] 2025-06-04 12:55:50,624 | INFO     | intersect: -155163761059.57217
[2025-06-04 08:56:07] 2025-06-04 12:55:50,625 | INFO     | chi2: 0.7214196303927815
[2025-06-04 08:56:07] 2025-06-04 12:55:50,625 | INFO     | -- intersect: -155163761059.57217
[2025-06-04 08:56:07] 2025-06-04 12:55:50,625 | INFO     | current memory leak: 88.72 B/s (using 46 data points, chi2=0.72)
[2025-06-04 08:56:07] 2025-06-04 12:55:50,625 | INFO     | ..............................
[2025-06-04 08:56:07] 2025-06-04 12:55:50,625 | INFO     | . Timing measurements:
[2025-06-04 08:56:07] 2025-06-04 12:55:50,625 | INFO     | . get job = 0 s
[2025-06-04 08:56:07] 2025-06-04 12:55:50,626 | INFO     | . initial setup = 2 s
[2025-06-04 08:56:07] 2025-06-04 12:55:50,626 | INFO     | . payload setup = 6 s
[2025-06-04 08:56:07] 2025-06-04 12:55:50,626 | INFO     | . stage-in = 0 s
[2025-06-04 08:56:07] 2025-06-04 12:55:50,626 | INFO     | . payload execution = 3182 s
[2025-06-04 08:56:07] 2025-06-04 12:55:50,626 | INFO     | . stage-out = 0 s
[2025-06-04 08:56:07] 2025-06-04 12:55:50,626 | INFO     | . log creation = 0 s
[2025-06-04 08:56:07] 2025-06-04 12:55:50,626 | INFO     | ..............................
[2025-06-04 08:56:07] 2025-06-04 12:55:50,829 | INFO     | 
[2025-06-04 08:56:07] 2025-06-04 12:55:50,830 | INFO     | job summary report
[2025-06-04 08:56:07] 2025-06-04 12:55:50,830 | INFO     | --------------------------------------------------
[2025-06-04 08:56:07] 2025-06-04 12:55:50,830 | INFO     | PanDA job id: 6678365293
[2025-06-04 08:56:07] 2025-06-04 12:55:50,830 | INFO     | task id: 45006595
[2025-06-04 08:56:07] 2025-06-04 12:55:50,830 | INFO     | errors: (none)
[2025-06-04 08:56:07] 2025-06-04 12:55:50,831 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:56:07] 2025-06-04 12:55:50,831 | INFO     | pilot state: finished 
[2025-06-04 08:56:07] 2025-06-04 12:55:50,831 | INFO     | transexitcode: 0
[2025-06-04 08:56:07] 2025-06-04 12:55:50,831 | INFO     | exeerrorcode: 0
[2025-06-04 08:56:07] 2025-06-04 12:55:50,831 | INFO     | exeerrordiag: 
[2025-06-04 08:56:07] 2025-06-04 12:55:50,832 | INFO     | exitcode: 0
[2025-06-04 08:56:07] 2025-06-04 12:55:50,832 | INFO     | exitmsg: OK
[2025-06-04 08:56:07] 2025-06-04 12:55:50,832 | INFO     | cpuconsumptiontime: 30193 s
[2025-06-04 08:56:07] 2025-06-04 12:55:50,832 | INFO     | nevents: 400
[2025-06-04 08:56:07] 2025-06-04 12:55:50,832 | INFO     | neventsw: 0
[2025-06-04 08:56:07] 2025-06-04 12:55:50,833 | INFO     | pid: 2128783
[2025-06-04 08:56:07] 2025-06-04 12:55:50,833 | INFO     | pgrp: 2128783
[2025-06-04 08:56:07] 2025-06-04 12:55:50,833 | INFO     | corecount: 12
[2025-06-04 08:56:07] 2025-06-04 12:55:50,833 | INFO     | event service: False
[2025-06-04 08:56:07] 2025-06-04 12:55:50,833 | INFO     | sizes: {0: 2397342, 4: 2397548, 11: 2397576, 3192: 2422992, 3195: 2431933, 3197: 2431989, 3203: 2432287}
[2025-06-04 08:56:07] 2025-06-04 12:55:50,833 | INFO     | --------------------------------------------------
[2025-06-04 08:56:07] 2025-06-04 12:55:50,834 | INFO     | 
[2025-06-04 08:56:07] 2025-06-04 12:55:50,834 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:56:07] 2025-06-04 12:55:50,852 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,852 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,852 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,852 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,854 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:56:07] 2025-06-04 12:55:50,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,854 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:56:07] 2025-06-04 12:55:50,854 | INFO     | job 6678365293 has completed (purged errors)
[2025-06-04 08:56:07] 2025-06-04 12:55:50,854 | INFO     | overall cleanup function is called
[2025-06-04 08:56:07] 2025-06-04 12:55:51,489 | INFO     | PID=2122251 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 08:56:07] 2025-06-04 12:55:51,489 | INFO     | .. there are 8 such processes running
[2025-06-04 08:56:07] 2025-06-04 12:55:51,862 | INFO     | --- collectZombieJob: --- 10, [2128783]
[2025-06-04 08:56:07] 2025-06-04 12:55:51,862 | INFO     | zombie collector waiting for pid 2128783
[2025-06-04 08:56:07] 2025-06-04 12:55:51,862 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:56:07] 2025-06-04 12:55:51,863 | INFO     | collected zombie processes
[2025-06-04 08:56:07] 2025-06-04 12:55:51,863 | INFO     | will attempt to kill all subprocesses of pid=2128783
[2025-06-04 08:56:07] 2025-06-04 12:55:52,076 | INFO     | process IDs to be killed: [2128783] (in reverse order)
[2025-06-04 08:56:07] 2025-06-04 12:55:52,143 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:56:07] 2025-06-04 12:55:52,143 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:56:07] 2025-06-04 12:55:52,152 | INFO     | did not find any defunct processes belonging to 2128783
[2025-06-04 08:56:07] 2025-06-04 12:55:52,161 | INFO     | did not find any defunct processes belonging to 2128783
[2025-06-04 08:56:07] 2025-06-04 12:55:52,161 | INFO     | ready for new job
[2025-06-04 08:56:07] 2025-06-04 12:55:52,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:56:07] 2025-06-04 12:55:52,164 | INFO     | **************************************
[2025-06-04 08:56:07] 2025-06-04 12:55:52,164 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:56:07] 2025-06-04 12:55:52,164 | INFO     | **************************************
[2025-06-04 08:56:07] 2025-06-04 12:55:52,164 | INFO     | 
[2025-06-04 08:56:07] 2025-06-04 12:55:52,179 | INFO     | architecture information:
[2025-06-04 08:56:07] 2025-06-04 12:55:52,179 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:56:07] 2025-06-04 12:55:52,192 | INFO     | cat /etc/os-release:
[2025-06-04 08:56:07] NAME="CentOS Linux"
[2025-06-04 08:56:07] VERSION="7 (Core)"
[2025-06-04 08:56:07] ID="centos"
[2025-06-04 08:56:07] ID_LIKE="rhel fedora"
[2025-06-04 08:56:07] VERSION_ID="7"
[2025-06-04 08:56:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:56:07] ANSI_COLOR="0;31"
[2025-06-04 08:56:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:56:07] HOME_URL="https://www.centos.org/"
[2025-06-04 08:56:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:56:07] 
[2025-06-04 08:56:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:56:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:56:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:56:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:56:07] 
[2025-06-04 08:56:07] 2025-06-04 12:55:52,193 | INFO     | **************************************
[2025-06-04 08:56:07] 2025-06-04 12:55:52,696 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:56:07] 2025-06-04 12:55:52,713 | INFO     | sufficient remaining disk space (76378275840 B)
[2025-06-04 08:56:07] 2025-06-04 12:55:52,714 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:56:07] 2025-06-04 12:55:52,714 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:56:07] 2025-06-04 12:55:52,714 | INFO     | update_server=False
[2025-06-04 08:56:07] 2025-06-04 12:55:52,714 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:56:07] 2025-06-04 12:55:52,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:56:07] 2025-06-04 12:55:52,715 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:56:07] 2025-06-04 12:55:52,715 | INFO     | aborting loop
[2025-06-04 08:56:07] 2025-06-04 12:55:52,856 | INFO     | all payload control threads have been joined
[2025-06-04 08:56:07] 2025-06-04 12:55:53,056 | INFO     | all job control threads have been joined
[2025-06-04 08:56:07] 2025-06-04 12:55:53,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:56:07] 2025-06-04 12:55:53,436 | INFO     | all data control threads have been joined
[2025-06-04 08:56:07] 2025-06-04 12:55:53,494 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:56:07] 2025-06-04 12:55:53,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:56:07] 2025-06-04 12:55:53,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:56:07] 2025-06-04 12:55:53,719 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:53,720 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:53,720 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:53,732 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:53,833 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:53,861 | INFO     | [payload] control thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:53,978 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:54,061 | INFO     | [job] control thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:54,171 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:54,441 | INFO     | [data] control thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:54,793 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:54,869 | INFO     | [job] validate thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:54,980 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:55,091 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:55,212 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:55:55,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:56:07] 2025-06-04 12:55:59,830 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:56:07] 2025-06-04 12:56:01,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953485403968)>', '<ExcThread(monitor, started 139952717297408)>']
[2025-06-04 08:56:07] 2025-06-04 12:56:02,539 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:56:07] 2025-06-04 12:56:02,540 | INFO     | [monitor] control thread has ended
[2025-06-04 08:56:07] 2025-06-04 12:56:06,899 | INFO     | all workflow threads have been joined
[2025-06-04 08:56:07] 2025-06-04 12:56:06,899 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:56:07] 2025-06-04 12:56:06,899 | INFO     | traces error code: 0
[2025-06-04 08:56:07] 2025-06-04 12:56:06,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:56:07] 2025-06-04 12:56:07,074 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:56:07] 2025-06-04 12:56:07,076 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:56:07] 2025-06-04 12:56:07,077 [wrapper] pilotpid: 2122251
[2025-06-04 08:56:07] 2025-06-04 12:56:07,079 [wrapper] Pilot exit status: 0
[2025-06-04 08:56:07] 2025-06-04 12:56:07,087 [wrapper] pandaids: 6678365293
[2025-06-04 08:56:07] 2025-06-04 12:56:07,126 [wrapper] cleanup supervisor_pilot 2255750 2122252
[2025-06-04 08:56:07] 2025-06-04 12:56:07,129 [wrapper] Test setup, not cleaning
[2025-06-04 08:56:07] 2025-06-04 12:56:07,131 [wrapper] apfmon messages muted
[2025-06-04 08:56:07] 2025-06-04 12:56:07,133 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:56:07] 2025-06-04 12:56:07,134 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:56:07]  *** Error codes and diagnostics ***
[2025-06-04 08:56:07]     "exeErrorCode": 0,
[2025-06-04 08:56:07]     "exeErrorDiag": "",
[2025-06-04 08:56:07]     "pilotErrorCode": 0,
[2025-06-04 08:56:07]     "pilotErrorDiag": "",
[2025-06-04 08:56:07]  *** Listing of results directory ***
[2025-06-04 08:56:07] total 394740
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:31 queuedata.json
[2025-06-04 08:56:07] -rwx------. 1 boincer umatlas     37140 Jun  4 02:32 runpilot2-wrapper.sh
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:56:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:02 run_atlas
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:02 job.xml
[2025-06-04 08:56:07] -rw-r--r--. 2 boincer umatlas 217288783 Jun  4 08:02 EVNT.45006593._002174.pool.root.1
[2025-06-04 08:56:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:02 start_atlas.sh
[2025-06-04 08:56:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:02 shared
[2025-06-04 08:56:07] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 08:02 input.tar.gz
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:02 boinc_lockfile
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:02 pandaJob.out
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas    986812 Jun  4 08:02 agis_schedconf.cvmfs.json
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:56:07] drwx------. 4 boincer umatlas      4096 Jun  4 08:02 pilot3
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas        95 Jun  4 08:55 pilot_heartbeat.json
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas 181718228 Jun  4 08:55 HITS.45006595._054324.pool.root.1
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas       530 Jun  4 08:55 boinc_task_state.xml
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas      1036 Jun  4 08:55 memory_monitor_summary.json
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas    353311 Jun  4 08:55 log.45006595._054324.job.log.tgz.1
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas      7714 Jun  4 08:55 heartbeat.json
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 08:56 init_data.xml
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:56 wrapper_checkpoint.txt
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:56 boinc_mmap_file
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas      4353 Jun  4 08:56 pilotlog.txt
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas    335299 Jun  4 08:56 log.45006595._054324.job.log.1
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas       357 Jun  4 08:56 output.list
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:56 runtime_log
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas    706560 Jun  4 08:56 result.tar.gz
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 08:56 runtime_log.err
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas       652 Jun  4 08:56 fyxKDmuqwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqWnKDmILvfMn.diag
[2025-06-04 08:56:07] -rw-r--r--. 1 boincer umatlas     21442 Jun  4 08:56 stderr.txt
[2025-06-04 08:56:07] HITS file was successfully produced:
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas 181718228 Jun  4 08:55 shared/HITS.pool.root.1
[2025-06-04 08:56:07]  *** Contents of shared directory: ***
[2025-06-04 08:56:07] total 390872
[2025-06-04 08:56:07] -rw-r--r--. 2 boincer umatlas 217288783 Jun  4 08:02 ATLAS.root_0
[2025-06-04 08:56:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:02 start_atlas.sh
[2025-06-04 08:56:07] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 08:02 input.tar.gz
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas 181718228 Jun  4 08:55 HITS.pool.root.1
[2025-06-04 08:56:07] -rw-------. 1 boincer umatlas    706560 Jun  4 08:56 result.tar.gz
08:56:08 (2118609): run_atlas exited; CPU time 30240.617311
08:56:08 (2118609): called boinc_finish(0)

</stderr_txt>
]]>

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