Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:31:05 (2136144): wrapper (7.7.26015): starting
18:31:05 (2136144): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 18:31:05] Arguments: --nthreads 12
[2025-06-04 18:31:05] Threads: 12
[2025-06-04 18:31:05] Checking for CVMFS
[2025-06-04 18:31:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:31:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:31:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:31:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:31:05] 2.12.7.0 752914 2849 92128 146788 3 56 3124222 4097024 0 130560 0 3124684 99.993 681898 7973 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-04 18:31:05] CVMFS is ok
[2025-06-04 18:31:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:31:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:31:05] Further information can be found at the LHC@home message board.
[2025-06-04 18:31:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:31:05] Checking for apptainer binary...
[2025-06-04 18:31:05] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-04 18:31:05] apptainer is not installed, using version from CVMFS
[2025-06-04 18:31:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:31:05] pckelar8.cern.ch
[2025-06-04 18:31:05] apptainer works
[2025-06-04 18:31:05] Set ATHENA_PROC_NUMBER=12
[2025-06-04 18:31:05] Set ATHENA_CORE_NUMBER=12
[2025-06-04 18:31:05] Starting ATLAS job with PandaID=6678365367
[2025-06-04 18:31:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:33:44]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:33:44]  filetype=log
[2025-06-04 19:33:44]  guid=28beeeee-f1cd-460f-8cc7-cb60dbd10cc2
[2025-06-04 19:33:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 19:33:44]  is_altstaged=None
[2025-06-04 19:33:44]  is_tar=False
[2025-06-04 19:33:44]  lfn=log.45006595._054398.job.log.tgz.1
[2025-06-04 19:33:44]  mtime=0
[2025-06-04 19:33:44]  protocol_id=None
[2025-06-04 19:33:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 19:33:44]  replicas=None
[2025-06-04 19:33:44]  scope=mc23_13p6TeV
[2025-06-04 19:33:44]  status=None
[2025-06-04 19:33:44]  status_code=0
[2025-06-04 19:33:44]  storage_token=
[2025-06-04 19:33:44]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678365367/log.45006595._054398.job.log.tgz.1
[2025-06-04 19:33:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/83/log.45006595._054398.job.log.tgz.1
[2025-06-04 19:33:44]  workdir=None
[2025-06-04 19:33:44] ]
[2025-06-04 19:33:44] 2025-06-04 17:33:20,059 | INFO     | transferring file log.45006595._054398.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678365367/log.45006595._054398.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 19:33:44] 2025-06-04 17:33:20,059 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678365367/log.45006595._054398.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._054398.job
[2025-06-04 19:33:44] 2025-06-04 17:33:20,073 | INFO     | adding to output.list: log.45006595._054398.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/83/log.45006595._054398.job.log.tg
[2025-06-04 19:33:44] 2025-06-04 17:33:20,074 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 19:33:44] 2025-06-04 17:33:20,074 | INFO     | summary of transferred files:
[2025-06-04 19:33:44] 2025-06-04 17:33:20,074 | INFO     |  -- lfn=log.45006595._054398.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 19:33:44] 2025-06-04 17:33:20,074 | INFO     | stage-out finished correctly
[2025-06-04 19:33:44] 2025-06-04 17:33:21,820 | INFO     | monitor loop #287: job 0:6678365367 is in state 'finished'
[2025-06-04 19:33:44] 2025-06-04 17:33:21,821 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:33:44] 2025-06-04 17:33:22,389 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 19:33:44] 2025-06-04 17:33:23,310 | INFO     | job 6678365367 has state=finished
[2025-06-04 19:33:44] 2025-06-04 17:33:23,310 | INFO     | preparing for final server update for job 6678365367 in state='finished'
[2025-06-04 19:33:44] 2025-06-04 17:33:23,311 | INFO     | this job has now completed (state=finished)
[2025-06-04 19:33:44] 2025-06-04 17:33:23,311 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 19:33:44] 2025-06-04 17:33:23,311 | INFO     | log transfer has been attempted: DONE
[2025-06-04 19:33:44] 2025-06-04 17:33:23,311 | INFO     | job 6678365367 has finished - writing final server update
[2025-06-04 19:33:44] 2025-06-04 17:33:23,311 | INFO     | total number of processed events: 400 (read)
[2025-06-04 19:33:44] 2025-06-04 17:33:23,315 | INFO     | executing command: lscpu
[2025-06-04 19:33:44] 2025-06-04 17:33:23,341 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 19:33:44] 2025-06-04 17:33:24,324 | INFO     | monitor loop #288: job 0:6678365367 is in state 'finished'
[2025-06-04 19:33:44] 2025-06-04 17:33:24,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:33:44] 2025-06-04 17:33:25,964 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 19:33:44] 2025-06-04 17:33:25,964 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678365367/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:33:44] 2025-06-04 17:33:25,965 | INFO     | extracted standard info from prmon json
[2025-06-04 19:33:44] 2025-06-04 17:33:25,965 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:33:44] 2025-06-04 17:33:25,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:33:44] 2025-06-04 17:33:25,965 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:33:44] 2025-06-04 17:33:25,966 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:33:44] 2025-06-04 17:33:25,967 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:33:44] 2025-06-04 17:33:25,967 | INFO     | sum of square deviations: 48810217.5
[2025-06-04 19:33:44] 2025-06-04 17:33:25,967 | INFO     | sum of deviations: -6791351125.0
[2025-06-04 19:33:44] 2025-06-04 17:33:25,967 | INFO     | mean x: 1749056616.5
[2025-06-04 19:33:44] 2025-06-04 17:33:25,967 | INFO     | mean y: 3014196.6296296297
[2025-06-04 19:33:44] 2025-06-04 17:33:25,968 | INFO     | -- intersect: 243363077489.85236
[2025-06-04 19:33:44] 2025-06-04 17:33:25,968 | INFO     | intersect: 243363077489.85236
[2025-06-04 19:33:44] 2025-06-04 17:33:25,968 | INFO     | chi2: 0.09233803896006591
[2025-06-04 19:33:44] 2025-06-04 17:33:25,968 | INFO     | -- intersect: 243363077489.85236
[2025-06-04 19:33:44] 2025-06-04 17:33:25,968 | INFO     | current memory leak: -139.14 B/s (using 54 data points, chi2=0.09)
[2025-06-04 19:33:44] 2025-06-04 17:33:25,968 | INFO     | ..............................
[2025-06-04 19:33:44] 2025-06-04 17:33:25,968 | INFO     | . Timing measurements:
[2025-06-04 19:33:44] 2025-06-04 17:33:25,969 | INFO     | . get job = 0 s
[2025-06-04 19:33:44] 2025-06-04 17:33:25,969 | INFO     | . initial setup = 1 s
[2025-06-04 19:33:44] 2025-06-04 17:33:25,969 | INFO     | . payload setup = 5 s
[2025-06-04 19:33:44] 2025-06-04 17:33:25,969 | INFO     | . stage-in = 0 s
[2025-06-04 19:33:44] 2025-06-04 17:33:25,969 | INFO     | . payload execution = 3704 s
[2025-06-04 19:33:44] 2025-06-04 17:33:25,969 | INFO     | . stage-out = 0 s
[2025-06-04 19:33:44] 2025-06-04 17:33:25,969 | INFO     | . log creation = 0 s
[2025-06-04 19:33:44] 2025-06-04 17:33:25,969 | INFO     | ..............................
[2025-06-04 19:33:44] 2025-06-04 17:33:26,038 | INFO     | 
[2025-06-04 19:33:44] 2025-06-04 17:33:26,038 | INFO     | job summary report
[2025-06-04 19:33:44] 2025-06-04 17:33:26,038 | INFO     | --------------------------------------------------
[2025-06-04 19:33:44] 2025-06-04 17:33:26,038 | INFO     | PanDA job id: 6678365367
[2025-06-04 19:33:44] 2025-06-04 17:33:26,038 | INFO     | task id: 45006595
[2025-06-04 19:33:44] 2025-06-04 17:33:26,038 | INFO     | errors: (none)
[2025-06-04 19:33:44] 2025-06-04 17:33:26,038 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:33:44] 2025-06-04 17:33:26,039 | INFO     | pilot state: finished 
[2025-06-04 19:33:44] 2025-06-04 17:33:26,039 | INFO     | transexitcode: 0
[2025-06-04 19:33:44] 2025-06-04 17:33:26,039 | INFO     | exeerrorcode: 0
[2025-06-04 19:33:44] 2025-06-04 17:33:26,039 | INFO     | exeerrordiag: 
[2025-06-04 19:33:44] 2025-06-04 17:33:26,039 | INFO     | exitcode: 0
[2025-06-04 19:33:44] 2025-06-04 17:33:26,039 | INFO     | exitmsg: OK
[2025-06-04 19:33:44] 2025-06-04 17:33:26,039 | INFO     | cpuconsumptiontime: 39453 s
[2025-06-04 19:33:44] 2025-06-04 17:33:26,039 | INFO     | nevents: 400
[2025-06-04 19:33:44] 2025-06-04 17:33:26,039 | INFO     | neventsw: 0
[2025-06-04 19:33:44] 2025-06-04 17:33:26,039 | INFO     | pid: 2146980
[2025-06-04 19:33:44] 2025-06-04 17:33:26,039 | INFO     | pgrp: 2146980
[2025-06-04 19:33:44] 2025-06-04 17:33:26,039 | INFO     | corecount: 12
[2025-06-04 19:33:44] 2025-06-04 17:33:26,040 | INFO     | event service: False
[2025-06-04 19:33:44] 2025-06-04 17:33:26,040 | INFO     | sizes: {0: 2397342, 1: 2397342, 3: 2397576, 11: 2397604, 3713: 2423306, 3714: 2432247, 3716: 2432431, 3720: 2432601}
[2025-06-04 19:33:44] 2025-06-04 17:33:26,040 | INFO     | --------------------------------------------------
[2025-06-04 19:33:44] 2025-06-04 17:33:26,040 | INFO     | 
[2025-06-04 19:33:44] 2025-06-04 17:33:26,040 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 19:33:44] 2025-06-04 17:33:26,059 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,059 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,060 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,060 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,060 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,060 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,060 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,060 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,060 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,061 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,061 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,061 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:33:44] 2025-06-04 17:33:26,061 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,061 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:33:44] 2025-06-04 17:33:26,061 | INFO     | job 6678365367 has completed (purged errors)
[2025-06-04 19:33:44] 2025-06-04 17:33:26,062 | INFO     | overall cleanup function is called
[2025-06-04 19:33:44] 2025-06-04 17:33:27,069 | INFO     | --- collectZombieJob: --- 10, [2146980]
[2025-06-04 19:33:44] 2025-06-04 17:33:27,069 | INFO     | zombie collector waiting for pid 2146980
[2025-06-04 19:33:44] 2025-06-04 17:33:27,069 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:33:44] 2025-06-04 17:33:27,069 | INFO     | collected zombie processes
[2025-06-04 19:33:44] 2025-06-04 17:33:27,069 | INFO     | will attempt to kill all subprocesses of pid=2146980
[2025-06-04 19:33:44] 2025-06-04 17:33:27,140 | INFO     | process IDs to be killed: [2146980] (in reverse order)
[2025-06-04 19:33:44] 2025-06-04 17:33:27,174 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:33:44] 2025-06-04 17:33:27,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:33:44] 2025-06-04 17:33:27,176 | INFO     | did not find any defunct processes belonging to 2146980
[2025-06-04 19:33:44] 2025-06-04 17:33:27,178 | INFO     | did not find any defunct processes belonging to 2146980
[2025-06-04 19:33:44] 2025-06-04 17:33:27,179 | INFO     | ready for new job
[2025-06-04 19:33:44] 2025-06-04 17:33:27,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:33:44] 2025-06-04 17:33:27,180 | INFO     | **************************************
[2025-06-04 19:33:44] 2025-06-04 17:33:27,180 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:33:44] 2025-06-04 17:33:27,180 | INFO     | **************************************
[2025-06-04 19:33:44] 2025-06-04 17:33:27,180 | INFO     | 
[2025-06-04 19:33:44] 2025-06-04 17:33:27,181 | INFO     | architecture information:
[2025-06-04 19:33:44] 2025-06-04 17:33:27,181 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:33:44] 2025-06-04 17:33:27,192 | INFO     | cat /etc/os-release:
[2025-06-04 19:33:44] NAME="CentOS Linux"
[2025-06-04 19:33:44] VERSION="7 (Core)"
[2025-06-04 19:33:44] ID="centos"
[2025-06-04 19:33:44] ID_LIKE="rhel fedora"
[2025-06-04 19:33:44] VERSION_ID="7"
[2025-06-04 19:33:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:33:44] ANSI_COLOR="0;31"
[2025-06-04 19:33:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:33:44] HOME_URL="https://www.centos.org/"
[2025-06-04 19:33:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:33:44] 
[2025-06-04 19:33:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:33:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:33:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:33:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:33:44] 
[2025-06-04 19:33:44] 2025-06-04 17:33:27,193 | INFO     | **************************************
[2025-06-04 19:33:44] 2025-06-04 17:33:27,696 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 19:33:44] 2025-06-04 17:33:27,707 | INFO     | sufficient remaining disk space (1715713605632 B)
[2025-06-04 19:33:44] 2025-06-04 17:33:27,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:33:44] 2025-06-04 17:33:27,707 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:33:44] 2025-06-04 17:33:27,707 | INFO     | update_server=False
[2025-06-04 19:33:44] 2025-06-04 17:33:27,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:33:44] 2025-06-04 17:33:27,708 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:33:44] 2025-06-04 17:33:27,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:33:44] 2025-06-04 17:33:27,708 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:33:44] 2025-06-04 17:33:27,708 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:33:44] 2025-06-04 17:33:27,709 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:33:44] 2025-06-04 17:33:27,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:33:44] 2025-06-04 17:33:27,832 | INFO     | aborting loop
[2025-06-04 19:33:44] 2025-06-04 17:33:28,153 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:33:44] 2025-06-04 17:33:28,457 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:33:44] 2025-06-04 17:33:28,557 | INFO     | all payload control threads have been joined
[2025-06-04 19:33:44] 2025-06-04 17:33:28,677 | INFO     | all data control threads have been joined
[2025-06-04 19:33:44] 2025-06-04 17:33:28,713 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:28,714 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:28,837 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:29,152 | INFO     | all job control threads have been joined
[2025-06-04 19:33:44] 2025-06-04 17:33:29,197 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:29,314 | INFO     | [job] validate thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:29,430 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:29,548 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:29,562 | INFO     | [payload] control thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:29,601 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:29,651 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:29,683 | INFO     | [data] control thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:30,144 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:30,158 | INFO     | [job] control thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:30,159 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:32,462 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:37,946 | INFO     | job.realtimelogging is not enabled
[2025-06-04 19:33:44] 2025-06-04 17:33:38,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:33:44] 2025-06-04 17:33:39,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140087964260160)>', '<ExcThread(monitor, started 140087035672320)>']
[2025-06-04 19:33:44] 2025-06-04 17:33:39,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:33:44] 2025-06-04 17:33:39,770 | INFO     | [monitor] control thread has ended
[2025-06-04 19:33:44] 2025-06-04 17:33:44,675 | INFO     | all workflow threads have been joined
[2025-06-04 19:33:44] 2025-06-04 17:33:44,675 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:33:44] 2025-06-04 17:33:44,676 | INFO     | traces error code: 0
[2025-06-04 19:33:44] 2025-06-04 17:33:44,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:33:44] 2025-06-04 17:33:44,745 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:33:44] 2025-06-04 17:33:44,747 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:33:44] 2025-06-04 17:33:44,750 [wrapper] pilotpid: 2139812
[2025-06-04 19:33:44] 2025-06-04 17:33:44,752 [wrapper] Pilot exit status: 0
[2025-06-04 19:33:44] 2025-06-04 17:33:44,760 [wrapper] pandaids: 6678365367
[2025-06-04 19:33:44] 2025-06-04 17:33:44,779 [wrapper] cleanup supervisor_pilot 2162651 2139813
[2025-06-04 19:33:44] 2025-06-04 17:33:44,781 [wrapper] Test setup, not cleaning
[2025-06-04 19:33:44] 2025-06-04 17:33:44,783 [wrapper] apfmon messages muted
[2025-06-04 19:33:44] 2025-06-04 17:33:44,784 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:33:44] 2025-06-04 17:33:44,786 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:33:44]  *** Error codes and diagnostics ***
[2025-06-04 19:33:44]     "exeErrorCode": 0,
[2025-06-04 19:33:44]     "exeErrorDiag": "",
[2025-06-04 19:33:44]     "pilotErrorCode": 0,
[2025-06-04 19:33:44]     "pilotErrorDiag": "",
[2025-06-04 19:33:44]  *** Listing of results directory ***
[2025-06-04 19:33:44] total 390812
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc      5111 Jun  4 08:35 queuedata.json
[2025-06-04 19:33:44] -rwx------ 1 boinc boinc     37140 Jun  4 08:36 runpilot2-wrapper.sh
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc       100 Jun  4 18:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:33:44] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 18:31 run_atlas
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc       105 Jun  4 18:31 job.xml
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc      6250 Jun  4 18:31 init_data.xml
[2025-06-04 19:33:44] -rw-r--r-- 2 boinc boinc 217340707 Jun  4 18:31 EVNT.45006593._002177.pool.root.1
[2025-06-04 19:33:44] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:31 start_atlas.sh
[2025-06-04 19:33:44] drwxrwx--x 2 boinc boinc      4096 Jun  4 18:31 shared
[2025-06-04 19:33:44] -rw-r--r-- 2 boinc boinc    508880 Jun  4 18:31 input.tar.gz
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc         0 Jun  4 18:31 boinc_lockfile
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc      2525 Jun  4 18:31 pandaJob.out
[2025-06-04 19:33:44] -rw------- 1 boinc boinc    990984 Jun  4 18:31 agis_schedconf.cvmfs.json
[2025-06-04 19:33:44] -rw------- 1 boinc boinc   1598969 Jun  4 18:31 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:33:44] drwx------ 4 boinc boinc      4096 Jun  4 18:31 pilot3
[2025-06-04 19:33:44] -rw------- 1 boinc boinc        95 Jun  4 19:32 pilot_heartbeat.json
[2025-06-04 19:33:44] -rw------- 1 boinc boinc 177556177 Jun  4 19:32 HITS.45006595._054398.pool.root.1
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc       529 Jun  4 19:33 boinc_task_state.xml
[2025-06-04 19:33:44] -rw------- 1 boinc boinc      1014 Jun  4 19:33 memory_monitor_summary.json
[2025-06-04 19:33:44] -rw------- 1 boinc boinc    356515 Jun  4 19:33 log.45006595._054398.job.log.tgz.1
[2025-06-04 19:33:44] -rw------- 1 boinc boinc      7690 Jun  4 19:33 heartbeat.json
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc      8192 Jun  4 19:33 boinc_mmap_file
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc        27 Jun  4 19:33 wrapper_checkpoint.txt
[2025-06-04 19:33:44] -rw------- 1 boinc boinc      4550 Jun  4 19:33 pilotlog.txt
[2025-06-04 19:33:44] -rw------- 1 boinc boinc    374012 Jun  4 19:33 log.45006595._054398.job.log.1
[2025-06-04 19:33:44] -rw------- 1 boinc boinc       357 Jun  4 19:33 output.list
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc       620 Jun  4 19:33 runtime_log
[2025-06-04 19:33:44] -rw------- 1 boinc boinc    747520 Jun  4 19:33 result.tar.gz
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc      8683 Jun  4 19:33 runtime_log.err
[2025-06-04 19:33:44] -rw------- 1 boinc boinc       655 Jun  4 19:33 lByNDmyuwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkYnKDmvdJrrn.diag
[2025-06-04 19:33:44] -rw-r--r-- 1 boinc boinc     21313 Jun  4 19:33 stderr.txt
[2025-06-04 19:33:44] HITS file was successfully produced:
[2025-06-04 19:33:44] -rw------- 1 boinc boinc 177556177 Jun  4 19:32 shared/HITS.pool.root.1
[2025-06-04 19:33:44]  *** Contents of shared directory: ***
[2025-06-04 19:33:44] total 386896
[2025-06-04 19:33:44] -rw-r--r-- 2 boinc boinc 217340707 Jun  4 18:31 ATLAS.root_0
[2025-06-04 19:33:44] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:31 start_atlas.sh
[2025-06-04 19:33:44] -rw-r--r-- 2 boinc boinc    508880 Jun  4 18:31 input.tar.gz
[2025-06-04 19:33:44] -rw------- 1 boinc boinc 177556177 Jun  4 19:32 HITS.pool.root.1
[2025-06-04 19:33:44] -rw------- 1 boinc boinc    747520 Jun  4 19:33 result.tar.gz
19:33:46 (2136144): run_atlas exited; CPU time 39456.153019
19:33:46 (2136144): called boinc_finish(0)

</stderr_txt>
]]>

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