Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:01:13 (17448): wrapper (7.7.26015): starting
11:01:13 (17448): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 11:01:13] Arguments: --nthreads 12
[2025-06-04 11:01:13] Threads: 12
[2025-06-04 11:01:13] Checking for CVMFS
[2025-06-04 11:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:01:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:01:13] 2.10.0.0 29567 2722 112380 146786 1 187 15201524 16777216 922 130560 0 11056531 99.998 699220 7300 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-04 11:01:13] CVMFS is ok
[2025-06-04 11:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:01:13] Checking for apptainer binary...
[2025-06-04 11:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:01:13] Running /usr/bin/apptainer --version
[2025-06-04 11:01:13] apptainer version 1.3.6-150600.4.9.1
[2025-06-04 11:01:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:01:13] boinc-runner
[2025-06-04 11:01:13] apptainer works
[2025-06-04 11:01:13] Set ATHENA_PROC_NUMBER=12
[2025-06-04 11:01:13] Set ATHENA_CORE_NUMBER=12
[2025-06-04 11:01:13] Starting ATLAS job with PandaID=6678364785
[2025-06-04 11:01:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:30:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:30:09]  mtime=0
[2025-06-04 11:30:09]  protocol_id=None
[2025-06-04 11:30:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:30:09]  replicas=None
[2025-06-04 11:30:09]  scope=mc23_13p6TeV
[2025-06-04 11:30:09]  status=None
[2025-06-04 11:30:09]  status_code=0
[2025-06-04 11:30:09]  storage_token=
[2025-06-04 11:30:09]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6678364785/log.45006595._054269.job.log.tgz.1
[2025-06-04 11:30:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/7b/log.45006595._054269.job.log.tgz.1
[2025-06-04 11:30:09]  workdir=None
[2025-06-04 11:30:09] ]
[2025-06-04 11:30:09] 2025-06-04 16:29:42,628 | INFO     | transferring file log.45006595._054269.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6678364785/log.45006595._054269.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 11:30:09] 2025-06-04 16:29:42,628 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6678364785/log.45006595._054269.job.log.tgz.1 /var/lib/boinc/slots/1/log.45006595._054269.job
[2025-06-04 11:30:09] 2025-06-04 16:29:42,644 | INFO     | adding to output.list: log.45006595._054269.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/7b/log.45006595._054269.job.log.tg
[2025-06-04 11:30:09] 2025-06-04 16:29:42,644 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:30:09] 2025-06-04 16:29:42,644 | INFO     | summary of transferred files:
[2025-06-04 11:30:09] 2025-06-04 16:29:42,644 | INFO     |  -- lfn=log.45006595._054269.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:30:09] 2025-06-04 16:29:42,644 | INFO     | stage-out finished correctly
[2025-06-04 11:30:09] 2025-06-04 16:29:44,639 | WARNING  | process 28198 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:30:09] 2025-06-04 16:29:44,639 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6678364785/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:30:09] 2025-06-04 16:29:44,697 | INFO     | number of running child processes to parent process 28198: 1
[2025-06-04 11:30:09] 2025-06-04 16:29:44,698 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:30:09] 2025-06-04 16:29:45,954 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:30:09] 2025-06-04 16:29:46,216 | INFO     | PID=21263 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 11:30:09] 2025-06-04 16:29:46,216 | INFO     | .. there are 2 such processes running
[2025-06-04 11:30:09] 2025-06-04 16:29:46,371 | INFO     | job 6678364785 has state=finished
[2025-06-04 11:30:09] 2025-06-04 16:29:46,372 | INFO     | preparing for final server update for job 6678364785 in state='finished'
[2025-06-04 11:30:09] 2025-06-04 16:29:46,372 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:30:09] 2025-06-04 16:29:46,372 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:30:09] 2025-06-04 16:29:46,372 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:30:09] 2025-06-04 16:29:46,372 | INFO     | job 6678364785 has finished - writing final server update
[2025-06-04 11:30:09] 2025-06-04 16:29:46,372 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:30:09] 2025-06-04 16:29:46,374 | INFO     | executing command: lscpu
[2025-06-04 11:30:09] 2025-06-04 16:29:46,395 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:30:09] 2025-06-04 16:29:47,200 | INFO     | monitor loop #134: job 0:6678364785 is in state 'finished'
[2025-06-04 11:30:09] 2025-06-04 16:29:47,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:30:09] 2025-06-04 16:29:49,702 | INFO     | monitor loop #135: job 0:6678364785 is in state 'finished'
[2025-06-04 11:30:09] 2025-06-04 16:29:49,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:30:09] 2025-06-04 16:29:51,074 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:30:09] 2025-06-04 16:29:51,074 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6678364785/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:30:09] 2025-06-04 16:29:51,075 | INFO     | extracted standard info from prmon json
[2025-06-04 11:30:09] 2025-06-04 16:29:51,075 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:30:09] 2025-06-04 16:29:51,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:30:09] 2025-06-04 16:29:51,075 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:30:09] 2025-06-04 16:29:51,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:30:09] 2025-06-04 16:29:51,076 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:30:09] 2025-06-04 16:29:51,076 | INFO     | sum of square deviations: 2865170.0
[2025-06-04 11:30:09] 2025-06-04 16:29:51,076 | INFO     | sum of deviations: -381184181.0
[2025-06-04 11:30:09] 2025-06-04 16:29:51,076 | INFO     | mean x: 1749053814.0
[2025-06-04 11:30:09] 2025-06-04 16:29:51,076 | INFO     | mean y: 2755380.0
[2025-06-04 11:30:09] 2025-06-04 16:29:51,076 | INFO     | -- intersect: 232698073847.8453
[2025-06-04 11:30:09] 2025-06-04 16:29:51,076 | INFO     | intersect: 232698073847.8453
[2025-06-04 11:30:09] 2025-06-04 16:29:51,076 | INFO     | chi2: 0.009856439929644911
[2025-06-04 11:30:09] 2025-06-04 16:29:51,076 | INFO     | -- intersect: 232698073847.8453
[2025-06-04 11:30:09] 2025-06-04 16:29:51,076 | INFO     | current memory leak: -133.04 B/s (using 21 data points, chi2=0.01)
[2025-06-04 11:30:09] 2025-06-04 16:29:51,077 | INFO     | ..............................
[2025-06-04 11:30:09] 2025-06-04 16:29:51,077 | INFO     | . Timing measurements:
[2025-06-04 11:30:09] 2025-06-04 16:29:51,077 | INFO     | . get job = 0 s
[2025-06-04 11:30:09] 2025-06-04 16:29:51,077 | INFO     | . initial setup = 3 s
[2025-06-04 11:30:09] 2025-06-04 16:29:51,077 | INFO     | . payload setup = 3 s
[2025-06-04 11:30:09] 2025-06-04 16:29:51,077 | INFO     | . stage-in = 0 s
[2025-06-04 11:30:09] 2025-06-04 16:29:51,077 | INFO     | . payload execution = 1680 s
[2025-06-04 11:30:09] 2025-06-04 16:29:51,077 | INFO     | . stage-out = 0 s
[2025-06-04 11:30:09] 2025-06-04 16:29:51,077 | INFO     | . log creation = 0 s
[2025-06-04 11:30:09] 2025-06-04 16:29:51,077 | INFO     | ..............................
[2025-06-04 11:30:09] 2025-06-04 16:29:51,124 | INFO     | 
[2025-06-04 11:30:09] 2025-06-04 16:29:51,124 | INFO     | job summary report
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | --------------------------------------------------
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | PanDA job id: 6678364785
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | task id: 45006595
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | errors: (none)
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | pilot state: finished 
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | transexitcode: 0
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | exeerrorcode: 0
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | exeerrordiag: 
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | exitcode: 0
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | exitmsg: OK
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | cpuconsumptiontime: 18348 s
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | nevents: 400
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | neventsw: 0
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | pid: 28198
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | pgrp: 28198
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | corecount: 12
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | event service: False
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | sizes: {0: 2397228, 2: 2397548, 10: 2397576, 1687: 2422392, 1688: 2422391, 1690: 2431388, 1693: 2431572, 1698: 2431742}
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | --------------------------------------------------
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | 
[2025-06-04 11:30:09] 2025-06-04 16:29:51,125 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-04 11:30:09] 2025-06-04 16:29:51,144 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,144 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,144 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,144 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,144 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,144 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,144 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | job 6678364785 has completed (purged errors)
[2025-06-04 11:30:09] 2025-06-04 16:29:51,145 | INFO     | overall cleanup function is called
[2025-06-04 11:30:09] 2025-06-04 16:29:52,150 | INFO     | --- collectZombieJob: --- 10, [28198]
[2025-06-04 11:30:09] 2025-06-04 16:29:52,150 | INFO     | zombie collector waiting for pid 28198
[2025-06-04 11:30:09] 2025-06-04 16:29:52,150 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:30:09] 2025-06-04 16:29:52,150 | INFO     | collected zombie processes
[2025-06-04 11:30:09] 2025-06-04 16:29:52,150 | INFO     | will attempt to kill all subprocesses of pid=28198
[2025-06-04 11:30:09] 2025-06-04 16:29:52,207 | INFO     | process IDs to be killed: [28198] (in reverse order)
[2025-06-04 11:30:09] 2025-06-04 16:29:52,235 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:30:09] 2025-06-04 16:29:52,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:30:09] 2025-06-04 16:29:52,237 | INFO     | did not find any defunct processes belonging to 28198
[2025-06-04 11:30:09] 2025-06-04 16:29:52,238 | INFO     | did not find any defunct processes belonging to 28198
[2025-06-04 11:30:09] 2025-06-04 16:29:52,238 | INFO     | ready for new job
[2025-06-04 11:30:09] 2025-06-04 16:29:52,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:30:09] 2025-06-04 16:29:52,240 | INFO     | **************************************
[2025-06-04 11:30:09] 2025-06-04 16:29:52,240 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:30:09] 2025-06-04 16:29:52,240 | INFO     | **************************************
[2025-06-04 11:30:09] 2025-06-04 16:29:52,240 | INFO     | 
[2025-06-04 11:30:09] 2025-06-04 16:29:52,241 | INFO     | architecture information:
[2025-06-04 11:30:09] 2025-06-04 16:29:52,241 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:30:09] 2025-06-04 16:29:52,249 | INFO     | cat /etc/os-release:
[2025-06-04 11:30:09] NAME="CentOS Linux"
[2025-06-04 11:30:09] VERSION="7 (Core)"
[2025-06-04 11:30:09] ID="centos"
[2025-06-04 11:30:09] ID_LIKE="rhel fedora"
[2025-06-04 11:30:09] VERSION_ID="7"
[2025-06-04 11:30:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:30:09] ANSI_COLOR="0;31"
[2025-06-04 11:30:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:30:09] HOME_URL="https://www.centos.org/"
[2025-06-04 11:30:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:30:09] 
[2025-06-04 11:30:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:30:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:30:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:30:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:30:09] 
[2025-06-04 11:30:09] 2025-06-04 16:29:52,250 | INFO     | **************************************
[2025-06-04 11:30:09] 2025-06-04 16:29:52,750 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-04 11:30:09] 2025-06-04 16:29:52,760 | INFO     | sufficient remaining disk space (3890359566336 B)
[2025-06-04 11:30:09] 2025-06-04 16:29:52,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:30:09] 2025-06-04 16:29:52,760 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:30:09] 2025-06-04 16:29:52,760 | INFO     | update_server=False
[2025-06-04 11:30:09] 2025-06-04 16:29:52,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:30:09] 2025-06-04 16:29:52,760 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:30:09] 2025-06-04 16:29:52,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:30:09] 2025-06-04 16:29:52,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:30:09] 2025-06-04 16:29:52,760 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:30:09] 2025-06-04 16:29:52,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:30:09] 2025-06-04 16:29:52,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:30:09] 2025-06-04 16:29:53,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:30:09] 2025-06-04 16:29:53,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:30:09] 2025-06-04 16:29:53,210 | INFO     | aborting loop
[2025-06-04 11:30:09] 2025-06-04 16:29:53,310 | INFO     | all payload control threads have been joined
[2025-06-04 11:30:09] 2025-06-04 16:29:53,358 | INFO     | all data control threads have been joined
[2025-06-04 11:30:09] 2025-06-04 16:29:53,765 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:53,766 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:53,818 | INFO     | all job control threads have been joined
[2025-06-04 11:30:09] 2025-06-04 16:29:54,162 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:54,214 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:54,250 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:54,314 | INFO     | [payload] control thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:54,353 | INFO     | [job] validate thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:54,363 | INFO     | [data] control thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:54,450 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:54,731 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:54,786 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:54,822 | INFO     | [job] control thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:55,206 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:55,214 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:29:56,766 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:30:03,192 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:30:09] 2025-06-04 16:30:04,197 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:30:09] 2025-06-04 16:30:04,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587932845888)>', '<ExcThread(monitor, started 140587290322688)>']
[2025-06-04 11:30:09] 2025-06-04 16:30:04,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:30:09] 2025-06-04 16:30:04,811 | INFO     | [monitor] control thread has ended
[2025-06-04 11:30:09] 2025-06-04 16:30:09,390 | INFO     | all workflow threads have been joined
[2025-06-04 11:30:09] 2025-06-04 16:30:09,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:30:09] 2025-06-04 16:30:09,390 | INFO     | traces error code: 0
[2025-06-04 11:30:09] 2025-06-04 16:30:09,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:30:09] 2025-06-04 16:30:09,444 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:30:09] 2025-06-04 16:30:09,445 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:30:09] 2025-06-04 16:30:09,447 [wrapper] pilotpid: 21263
[2025-06-04 11:30:09] 2025-06-04 16:30:09,448 [wrapper] Pilot exit status: 0
[2025-06-04 11:30:09] 2025-06-04 16:30:09,452 [wrapper] pandaids: 6678364785
[2025-06-04 11:30:09] 2025-06-04 16:30:09,469 [wrapper] cleanup supervisor_pilot 31505 21264
[2025-06-04 11:30:09] 2025-06-04 16:30:09,470 [wrapper] Test setup, not cleaning
[2025-06-04 11:30:09] 2025-06-04 16:30:09,472 [wrapper] apfmon messages muted
[2025-06-04 11:30:09] 2025-06-04 16:30:09,474 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:30:09] 2025-06-04 16:30:09,475 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:30:09]  *** Error codes and diagnostics ***
[2025-06-04 11:30:09]     "exeErrorCode": 0,
[2025-06-04 11:30:09]     "exeErrorDiag": "",
[2025-06-04 11:30:09]     "pilotErrorCode": 0,
[2025-06-04 11:30:09]     "pilotErrorDiag": "",
[2025-06-04 11:30:09]  *** Listing of results directory ***
[2025-06-04 11:30:09] total 396368
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc    495897 Jun  4 00:59 pilot3.tar.gz
[2025-06-04 11:30:09] -rwx------ 1 boinc boinc     37140 Jun  4 01:31 runpilot2-wrapper.sh
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:31 queuedata.json
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:30:09] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:01 run_atlas
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:01 job.xml
[2025-06-04 11:30:09] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:01 start_atlas.sh
[2025-06-04 11:30:09] drwxrwx--x 1 boinc boinc        76 Jun  4 11:01 shared
[2025-06-04 11:30:09] -rw-r--r-- 2 boinc boinc    508877 Jun  4 11:01 input.tar.gz
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc     10044 Jun  4 11:01 init_data.xml
[2025-06-04 11:30:09] -rw-r--r-- 2 boinc boinc 217515850 Jun  4 11:01 EVNT.45006593._002172.pool.root.1
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:01 boinc_lockfile
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc      2525 Jun  4 11:01 pandaJob.out
[2025-06-04 11:30:09] -rw------- 1 boinc boinc    990989 Jun  4 11:01 agis_schedconf.cvmfs.json
[2025-06-04 11:30:09] -rw------- 1 boinc boinc   1598969 Jun  4 11:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:30:09] drwx------ 1 boinc boinc       368 Jun  4 11:01 pilot3
[2025-06-04 11:30:09] -rw------- 1 boinc boinc 183479099 Jun  4 11:29 HITS.45006595._054269.pool.root.1
[2025-06-04 11:30:09] -rw------- 1 boinc boinc        95 Jun  4 11:29 pilot_heartbeat.json
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc       529 Jun  4 11:29 boinc_task_state.xml
[2025-06-04 11:30:09] -rw------- 1 boinc boinc      1024 Jun  4 11:29 memory_monitor_summary.json
[2025-06-04 11:30:09] -rw------- 1 boinc boinc    330196 Jun  4 11:29 log.45006595._054269.job.log.tgz.1
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc        27 Jun  4 11:29 wrapper_checkpoint.txt
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc      8192 Jun  4 11:29 boinc_mmap_file
[2025-06-04 11:30:09] -rw------- 1 boinc boinc      7691 Jun  4 11:29 heartbeat.json
[2025-06-04 11:30:09] -rw------- 1 boinc boinc      4550 Jun  4 11:30 pilotlog.txt
[2025-06-04 11:30:09] -rw------- 1 boinc boinc    203513 Jun  4 11:30 log.45006595._054269.job.log.1
[2025-06-04 11:30:09] -rw------- 1 boinc boinc       357 Jun  4 11:30 output.list
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc       620 Jun  4 11:30 runtime_log
[2025-06-04 11:30:09] -rw------- 1 boinc boinc    552960 Jun  4 11:30 result.tar.gz
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc      8683 Jun  4 11:30 runtime_log.err
[2025-06-04 11:30:09] -rw------- 1 boinc boinc       653 Jun  4 11:30 ic1KDm6pwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8raKDmili3Pn.diag
[2025-06-04 11:30:09] -rw-r--r-- 1 boinc boinc     21401 Jun  4 11:30 stderr.txt
[2025-06-04 11:30:09] HITS file was successfully produced:
[2025-06-04 11:30:09] -rw------- 1 boinc boinc 183479099 Jun  4 11:29 shared/HITS.pool.root.1
[2025-06-04 11:30:09]  *** Contents of shared directory: ***
[2025-06-04 11:30:09] total 392656
[2025-06-04 11:30:09] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:01 start_atlas.sh
[2025-06-04 11:30:09] -rw-r--r-- 2 boinc boinc    508877 Jun  4 11:01 input.tar.gz
[2025-06-04 11:30:09] -rw-r--r-- 2 boinc boinc 217515850 Jun  4 11:01 ATLAS.root_0
[2025-06-04 11:30:09] -rw------- 1 boinc boinc 183479099 Jun  4 11:29 HITS.pool.root.1
[2025-06-04 11:30:09] -rw------- 1 boinc boinc    552960 Jun  4 11:30 result.tar.gz
11:30:11 (17448): run_atlas exited; CPU time 18356.932563
11:30:11 (17448): called boinc_finish(0)

</stderr_txt>
]]>

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