Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:17:27 (2892518): wrapper (7.7.26015): starting
07:17:27 (2892518): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:17:27] Arguments: --nthreads 8
[2025-06-04 07:17:27] Threads: 8
[2025-06-04 07:17:27] Checking for CVMFS
[2025-06-04 07:17:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:17:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:17:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:17:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:17:27] 2.12.6.0 2939844 23176 438704 146778 1 66 26289766 40960000 8344 16776704 1 123680929 99.690 102323735 27270 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:17:27] CVMFS is ok
[2025-06-04 07:17:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:17:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:17:27] Further information can be found at the LHC@home message board.
[2025-06-04 07:17:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:17:27] Checking for apptainer binary...
[2025-06-04 07:17:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:17:27] Running /usr/bin/apptainer --version
[2025-06-04 07:17:27] apptainer version 1.4.1-1.el9
[2025-06-04 07:17:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:17:27] c7-11-15.aglt2.org
[2025-06-04 07:17:27] apptainer works
[2025-06-04 07:17:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:17:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:17:27] Starting ATLAS job with PandaID=6678364342
[2025-06-04 07:17:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:11:02]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:11:02]  guid=e556fbb0-474c-4cd2-854d-8da80bb67c32
[2025-06-04 08:11:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:11:02]  is_altstaged=None
[2025-06-04 08:11:02]  is_tar=False
[2025-06-04 08:11:02]  lfn=log.45006595._053842.job.log.tgz.1
[2025-06-04 08:11:02]  mtime=0
[2025-06-04 08:11:02]  protocol_id=None
[2025-06-04 08:11:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:11:02]  replicas=None
[2025-06-04 08:11:02]  scope=mc23_13p6TeV
[2025-06-04 08:11:02]  status=None
[2025-06-04 08:11:02]  status_code=0
[2025-06-04 08:11:02]  storage_token=
[2025-06-04 08:11:02]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678364342/log.45006595._053842.job.log.tgz.1
[2025-06-04 08:11:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/1e/log.45006595._053842.job.log.tgz.1
[2025-06-04 08:11:02]  workdir=None
[2025-06-04 08:11:02] ]
[2025-06-04 08:11:02] 2025-06-04 12:10:43,789 | INFO     | transferring file log.45006595._053842.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678364342/log.45006595._053842.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:11:02] 2025-06-04 12:10:43,790 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678364342/log.45006595._053842.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._053842.job
[2025-06-04 08:11:02] 2025-06-04 12:10:43,808 | INFO     | adding to output.list: log.45006595._053842.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/1e/log.45006595._053842.job.log.tg
[2025-06-04 08:11:02] 2025-06-04 12:10:43,808 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:11:02] 2025-06-04 12:10:43,808 | INFO     | summary of transferred files:
[2025-06-04 08:11:02] 2025-06-04 12:10:43,808 | INFO     |  -- lfn=log.45006595._053842.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:11:02] 2025-06-04 12:10:43,808 | INFO     | stage-out finished correctly
[2025-06-04 08:11:02] 2025-06-04 12:10:45,349 | INFO     | monitor loop #241: job 0:6678364342 is in state 'finished'
[2025-06-04 08:11:02] 2025-06-04 12:10:45,350 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:11:02] 2025-06-04 12:10:46,579 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:11:02] 2025-06-04 12:10:46,969 | INFO     | job 6678364342 has state=finished
[2025-06-04 08:11:02] 2025-06-04 12:10:46,969 | INFO     | preparing for final server update for job 6678364342 in state='finished'
[2025-06-04 08:11:02] 2025-06-04 12:10:46,970 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:11:02] 2025-06-04 12:10:46,970 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:11:02] 2025-06-04 12:10:46,970 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:11:02] 2025-06-04 12:10:46,970 | INFO     | job 6678364342 has finished - writing final server update
[2025-06-04 08:11:02] 2025-06-04 12:10:46,970 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:11:02] 2025-06-04 12:10:46,989 | INFO     | executing command: lscpu
[2025-06-04 08:11:02] 2025-06-04 12:10:47,049 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:11:02] 2025-06-04 12:10:47,853 | INFO     | monitor loop #242: job 0:6678364342 is in state 'finished'
[2025-06-04 08:11:02] 2025-06-04 12:10:47,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:11:02] 2025-06-04 12:10:50,356 | INFO     | monitor loop #243: job 0:6678364342 is in state 'finished'
[2025-06-04 08:11:02] 2025-06-04 12:10:50,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:11:02] 2025-06-04 12:10:50,521 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:11:02] 2025-06-04 12:10:50,521 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678364342/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:11:02] 2025-06-04 12:10:50,522 | INFO     | extracted standard info from prmon json
[2025-06-04 08:11:02] 2025-06-04 12:10:50,522 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:11:02] 2025-06-04 12:10:50,522 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:11:02] 2025-06-04 12:10:50,523 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:11:02] 2025-06-04 12:10:50,523 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:11:02] 2025-06-04 12:10:50,524 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:11:02] 2025-06-04 12:10:50,524 | INFO     | sum of square deviations: 28242390.0
[2025-06-04 08:11:02] 2025-06-04 12:10:50,524 | INFO     | sum of deviations: 4609541372.0
[2025-06-04 08:11:02] 2025-06-04 12:10:50,524 | INFO     | mean x: 1749037528.0
[2025-06-04 08:11:02] 2025-06-04 12:10:50,525 | INFO     | mean y: 2189317.777777778
[2025-06-04 08:11:02] 2025-06-04 12:10:50,525 | INFO     | -- intersect: -285464474321.4046
[2025-06-04 08:11:02] 2025-06-04 12:10:50,525 | INFO     | intersect: -285464474321.4046
[2025-06-04 08:11:02] 2025-06-04 12:10:50,525 | INFO     | chi2: 0.7323457729014285
[2025-06-04 08:11:02] 2025-06-04 12:10:50,525 | INFO     | -- intersect: -285464474321.4046
[2025-06-04 08:11:02] 2025-06-04 12:10:50,525 | INFO     | current memory leak: 163.21 B/s (using 45 data points, chi2=0.73)
[2025-06-04 08:11:02] 2025-06-04 12:10:50,525 | INFO     | ..............................
[2025-06-04 08:11:02] 2025-06-04 12:10:50,525 | INFO     | . Timing measurements:
[2025-06-04 08:11:02] 2025-06-04 12:10:50,525 | INFO     | . get job = 0 s
[2025-06-04 08:11:02] 2025-06-04 12:10:50,525 | INFO     | . initial setup = 2 s
[2025-06-04 08:11:02] 2025-06-04 12:10:50,525 | INFO     | . payload setup = 5 s
[2025-06-04 08:11:02] 2025-06-04 12:10:50,526 | INFO     | . stage-in = 0 s
[2025-06-04 08:11:02] 2025-06-04 12:10:50,526 | INFO     | . payload execution = 3162 s
[2025-06-04 08:11:02] 2025-06-04 12:10:50,526 | INFO     | . stage-out = 0 s
[2025-06-04 08:11:02] 2025-06-04 12:10:50,526 | INFO     | . log creation = 0 s
[2025-06-04 08:11:02] 2025-06-04 12:10:50,526 | INFO     | ..............................
[2025-06-04 08:11:02] 2025-06-04 12:10:51,018 | INFO     | 
[2025-06-04 08:11:02] 2025-06-04 12:10:51,018 | INFO     | job summary report
[2025-06-04 08:11:02] 2025-06-04 12:10:51,018 | INFO     | --------------------------------------------------
[2025-06-04 08:11:02] 2025-06-04 12:10:51,018 | INFO     | PanDA job id: 6678364342
[2025-06-04 08:11:02] 2025-06-04 12:10:51,018 | INFO     | task id: 45006595
[2025-06-04 08:11:02] 2025-06-04 12:10:51,018 | INFO     | errors: (none)
[2025-06-04 08:11:02] 2025-06-04 12:10:51,018 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | pilot state: finished 
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | transexitcode: 0
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | exeerrorcode: 0
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | exeerrordiag: 
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | exitcode: 0
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | exitmsg: OK
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | cpuconsumptiontime: 20577 s
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | nevents: 400
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | neventsw: 0
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | pid: 2902988
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | pgrp: 2902988
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | corecount: 8
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | event service: False
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | sizes: {0: 2404356, 1: 2405212, 5: 2405418, 12: 2405474, 3172: 2430944, 3173: 2439885, 3176: 2440069, 3180: 2440239}
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | --------------------------------------------------
[2025-06-04 08:11:02] 2025-06-04 12:10:51,019 | INFO     | 
[2025-06-04 08:11:02] 2025-06-04 12:10:51,020 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 08:11:02] 2025-06-04 12:10:51,038 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,038 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,038 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,038 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,038 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,038 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:11:02] 2025-06-04 12:10:51,039 | INFO     | job 6678364342 has completed (purged errors)
[2025-06-04 08:11:02] 2025-06-04 12:10:51,040 | INFO     | overall cleanup function is called
[2025-06-04 08:11:02] 2025-06-04 12:10:52,048 | INFO     | --- collectZombieJob: --- 10, [2902988]
[2025-06-04 08:11:02] 2025-06-04 12:10:52,048 | INFO     | zombie collector waiting for pid 2902988
[2025-06-04 08:11:02] 2025-06-04 12:10:52,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:11:02] 2025-06-04 12:10:52,048 | INFO     | collected zombie processes
[2025-06-04 08:11:02] 2025-06-04 12:10:52,049 | INFO     | will attempt to kill all subprocesses of pid=2902988
[2025-06-04 08:11:02] 2025-06-04 12:10:52,272 | INFO     | process IDs to be killed: [2902988] (in reverse order)
[2025-06-04 08:11:02] 2025-06-04 12:10:52,353 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:11:02] 2025-06-04 12:10:52,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:11:02] 2025-06-04 12:10:52,364 | INFO     | did not find any defunct processes belonging to 2902988
[2025-06-04 08:11:02] 2025-06-04 12:10:52,371 | INFO     | did not find any defunct processes belonging to 2902988
[2025-06-04 08:11:02] 2025-06-04 12:10:52,371 | INFO     | ready for new job
[2025-06-04 08:11:02] 2025-06-04 12:10:52,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:11:02] 2025-06-04 12:10:52,372 | INFO     | **************************************
[2025-06-04 08:11:02] 2025-06-04 12:10:52,372 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:11:02] 2025-06-04 12:10:52,372 | INFO     | **************************************
[2025-06-04 08:11:02] 2025-06-04 12:10:52,372 | INFO     | 
[2025-06-04 08:11:02] 2025-06-04 12:10:52,388 | INFO     | architecture information:
[2025-06-04 08:11:02] 2025-06-04 12:10:52,388 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:11:02] 2025-06-04 12:10:52,403 | INFO     | cat /etc/os-release:
[2025-06-04 08:11:02] NAME="CentOS Linux"
[2025-06-04 08:11:02] VERSION="7 (Core)"
[2025-06-04 08:11:02] ID="centos"
[2025-06-04 08:11:02] ID_LIKE="rhel fedora"
[2025-06-04 08:11:02] VERSION_ID="7"
[2025-06-04 08:11:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:11:02] ANSI_COLOR="0;31"
[2025-06-04 08:11:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:11:02] HOME_URL="https://www.centos.org/"
[2025-06-04 08:11:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:11:02] 
[2025-06-04 08:11:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:11:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:11:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:11:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:11:02] 
[2025-06-04 08:11:02] 2025-06-04 12:10:52,403 | INFO     | **************************************
[2025-06-04 08:11:02] 2025-06-04 12:10:52,906 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 08:11:02] 2025-06-04 12:10:52,924 | INFO     | sufficient remaining disk space (85964357632 B)
[2025-06-04 08:11:02] 2025-06-04 12:10:52,924 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:11:02] 2025-06-04 12:10:52,925 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:11:02] 2025-06-04 12:10:52,925 | INFO     | update_server=False
[2025-06-04 08:11:02] 2025-06-04 12:10:52,925 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:11:02] 2025-06-04 12:10:52,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:11:02] 2025-06-04 12:10:52,926 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:11:02] 2025-06-04 12:10:52,927 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:11:02] 2025-06-04 12:10:52,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:11:02] 2025-06-04 12:10:52,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:11:02] 2025-06-04 12:10:53,076 | INFO     | all payload control threads have been joined
[2025-06-04 08:11:02] 2025-06-04 12:10:53,285 | INFO     | all data control threads have been joined
[2025-06-04 08:11:02] 2025-06-04 12:10:53,387 | INFO     | all job control threads have been joined
[2025-06-04 08:11:02] 2025-06-04 12:10:53,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:11:02] 2025-06-04 12:10:53,864 | INFO     | aborting loop
[2025-06-04 08:11:02] 2025-06-04 12:10:53,930 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:53,982 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:54,067 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:54,076 | INFO     | [payload] control thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:54,291 | INFO     | [data] control thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:54,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:11:02] 2025-06-04 12:10:54,393 | INFO     | [job] control thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:54,442 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:54,570 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:54,849 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:54,869 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:54,968 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:55,136 | INFO     | [job] validate thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:55,277 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:55,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:11:02] 2025-06-04 12:10:56,381 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:56,601 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:56,931 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:11:02] 2025-06-04 12:10:57,001 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140488489367360)>', '<ExcThread(monitor, started 140488145352448)>']
[2025-06-04 08:11:02] 2025-06-04 12:10:57,936 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:11:02] 2025-06-04 12:10:57,936 | INFO     | [monitor] control thread has ended
[2025-06-04 08:11:02] 2025-06-04 12:11:02,026 | INFO     | all workflow threads have been joined
[2025-06-04 08:11:02] 2025-06-04 12:11:02,026 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:11:02] 2025-06-04 12:11:02,026 | INFO     | traces error code: 0
[2025-06-04 08:11:02] 2025-06-04 12:11:02,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:11:02] 2025-06-04 12:11:02,162 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:11:02] 2025-06-04 12:11:02,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:11:02] 2025-06-04 12:11:02,168 [wrapper] pilotpid: 2896119
[2025-06-04 08:11:02] 2025-06-04 12:11:02,170 [wrapper] Pilot exit status: 0
[2025-06-04 08:11:02] 2025-06-04 12:11:02,180 [wrapper] pandaids: 6678364342
[2025-06-04 08:11:02] 2025-06-04 12:11:02,239 [wrapper] cleanup supervisor_pilot 3008814 2896120
[2025-06-04 08:11:02] 2025-06-04 12:11:02,242 [wrapper] Test setup, not cleaning
[2025-06-04 08:11:02] 2025-06-04 12:11:02,244 [wrapper] apfmon messages muted
[2025-06-04 08:11:02] 2025-06-04 12:11:02,246 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:11:02] 2025-06-04 12:11:02,249 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:11:02]  *** Error codes and diagnostics ***
[2025-06-04 08:11:02]     "exeErrorCode": 0,
[2025-06-04 08:11:02]     "exeErrorDiag": "",
[2025-06-04 08:11:02]     "pilotErrorCode": 0,
[2025-06-04 08:11:02]     "pilotErrorDiag": "",
[2025-06-04 08:11:02]  *** Listing of results directory ***
[2025-06-04 08:11:02] total 385832
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:16 queuedata.json
[2025-06-04 08:11:02] -rwx------. 1 boincer umatlas     37140 Jun  4 02:17 runpilot2-wrapper.sh
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:11:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:17 run_atlas
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:17 job.xml
[2025-06-04 08:11:02] -rw-r--r--. 2 boincer umatlas 213753487 Jun  4 07:17 EVNT.45006593._002155.pool.root.1
[2025-06-04 08:11:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:17 start_atlas.sh
[2025-06-04 08:11:02] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:17 shared
[2025-06-04 08:11:02] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 07:17 input.tar.gz
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:17 boinc_lockfile
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:17 pandaJob.out
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas    986812 Jun  4 07:17 agis_schedconf.cvmfs.json
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas   1603667 Jun  4 07:17 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:11:02] drwx------. 4 boincer umatlas      4096 Jun  4 07:17 pilot3
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas      6896 Jun  4 08:01 init_data.xml
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas 176273392 Jun  4 08:10 HITS.45006595._053842.pool.root.1
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:10 boinc_task_state.xml
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas        95 Jun  4 08:10 pilot_heartbeat.json
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas      1035 Jun  4 08:10 memory_monitor_summary.json
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas    282208 Jun  4 08:10 log.45006595._053842.job.log.tgz.1
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas      7681 Jun  4 08:10 heartbeat.json
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:10 boinc_mmap_file
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:10 wrapper_checkpoint.txt
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas      4476 Jun  4 08:11 pilotlog.txt
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas    331969 Jun  4 08:11 log.45006595._053842.job.log.1
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas       357 Jun  4 08:11 output.list
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:11 runtime_log
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas    634880 Jun  4 08:11 result.tar.gz
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 08:11 runtime_log.err
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas       650 Jun  4 08:11 rRMKDmucwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyRnKDm8eIiLm.diag
[2025-06-04 08:11:02] -rw-r--r--. 1 boincer umatlas     21343 Jun  4 08:11 stderr.txt
[2025-06-04 08:11:02] HITS file was successfully produced:
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas 176273392 Jun  4 08:10 shared/HITS.pool.root.1
[2025-06-04 08:11:02]  *** Contents of shared directory: ***
[2025-06-04 08:11:02] total 382032
[2025-06-04 08:11:02] -rw-r--r--. 2 boincer umatlas 213753487 Jun  4 07:17 ATLAS.root_0
[2025-06-04 08:11:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:17 start_atlas.sh
[2025-06-04 08:11:02] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 07:17 input.tar.gz
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas 176273392 Jun  4 08:10 HITS.pool.root.1
[2025-06-04 08:11:02] -rw-------. 1 boincer umatlas    634880 Jun  4 08:11 result.tar.gz
08:11:03 (2892518): run_atlas exited; CPU time 20606.761182
08:11:03 (2892518): called boinc_finish(0)

</stderr_txt>
]]>

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