Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:07:39 (2507158): wrapper (7.7.26015): starting
07:07:39 (2507158): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:07:39] Arguments: --nthreads 8
[2025-06-04 07:07:39] Threads: 8
[2025-06-04 07:07:39] Checking for CVMFS
[2025-06-04 07:07:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:07:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:07:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:07:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:07:40] 2.12.6.0 8406 37232 431600 146777 1 678 26421346 32935936 7283 16776704 1 319593315 99.647 287095301 22733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:07:40] CVMFS is ok
[2025-06-04 07:07:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:07:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:07:40] Further information can be found at the LHC@home message board.
[2025-06-04 07:07:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:07:40] Checking for apptainer binary...
[2025-06-04 07:07:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:07:40] Running /usr/bin/apptainer --version
[2025-06-04 07:07:40] apptainer version 1.4.1-1.el9
[2025-06-04 07:07:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:07:40] c7-16-9.aglt2.org
[2025-06-04 07:07:40] apptainer works
[2025-06-04 07:07:40] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:07:40] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:07:40] Starting ATLAS job with PandaID=6678364594
[2025-06-04 07:07:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:01:00]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:01:00]  filesize=298613
[2025-06-04 08:01:00]  filetype=log
[2025-06-04 08:01:00]  guid=15d72745-b7dd-498f-a869-cc556a8a34b5
[2025-06-04 08:01:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:01:00]  is_altstaged=None
[2025-06-04 08:01:00]  is_tar=False
[2025-06-04 08:01:00]  lfn=log.45006595._054078.job.log.tgz.1
[2025-06-04 08:01:00]  mtime=0
[2025-06-04 08:01:00]  protocol_id=None
[2025-06-04 08:01:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:01:00]  replicas=None
[2025-06-04 08:01:00]  scope=mc23_13p6TeV
[2025-06-04 08:01:00]  status=None
[2025-06-04 08:01:00]  status_code=0
[2025-06-04 08:01:00]  storage_token=
[2025-06-04 08:01:00]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678364594/log.45006595._054078.job.log.tgz.1
[2025-06-04 08:01:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/c4/log.45006595._054078.job.log.tgz.1
[2025-06-04 08:01:00]  workdir=None
[2025-06-04 08:01:00] ]
[2025-06-04 08:01:00] 2025-06-04 12:00:44,436 | INFO     | transferring file log.45006595._054078.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678364594/log.45006595._054078.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:01:00] 2025-06-04 12:00:44,436 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678364594/log.45006595._054078.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._054078.job
[2025-06-04 08:01:00] 2025-06-04 12:00:44,451 | INFO     | adding to output.list: log.45006595._054078.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/c4/log.45006595._054078.job.log.tg
[2025-06-04 08:01:00] 2025-06-04 12:00:44,452 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:01:00] 2025-06-04 12:00:44,452 | INFO     | summary of transferred files:
[2025-06-04 08:01:00] 2025-06-04 12:00:44,452 | INFO     |  -- lfn=log.45006595._054078.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:01:00] 2025-06-04 12:00:44,452 | INFO     | stage-out finished correctly
[2025-06-04 08:01:00] 2025-06-04 12:00:44,527 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:01:00] 2025-06-04 12:00:44,962 | INFO     | monitor loop #237: job 0:6678364594 is in state 'finished'
[2025-06-04 08:01:00] 2025-06-04 12:00:44,962 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:01:00] 2025-06-04 12:00:45,527 | INFO     | job 6678364594 has state=finished
[2025-06-04 08:01:00] 2025-06-04 12:00:45,528 | INFO     | preparing for final server update for job 6678364594 in state='finished'
[2025-06-04 08:01:00] 2025-06-04 12:00:45,528 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:01:00] 2025-06-04 12:00:45,528 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:01:00] 2025-06-04 12:00:45,528 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:01:00] 2025-06-04 12:00:45,528 | INFO     | job 6678364594 has finished - writing final server update
[2025-06-04 08:01:00] 2025-06-04 12:00:45,529 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:01:00] 2025-06-04 12:00:45,546 | INFO     | executing command: lscpu
[2025-06-04 08:01:00] 2025-06-04 12:00:45,627 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:01:00] 2025-06-04 12:00:47,465 | INFO     | monitor loop #238: job 0:6678364594 is in state 'finished'
[2025-06-04 08:01:00] 2025-06-04 12:00:47,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:01:00] 2025-06-04 12:00:48,790 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:01:00] 2025-06-04 12:00:48,791 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678364594/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:01:00] 2025-06-04 12:00:48,792 | INFO     | extracted standard info from prmon json
[2025-06-04 08:01:00] 2025-06-04 12:00:48,792 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:01:00] 2025-06-04 12:00:48,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:01:00] 2025-06-04 12:00:48,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:01:00] 2025-06-04 12:00:48,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:01:00] 2025-06-04 12:00:48,793 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:01:00] 2025-06-04 12:00:48,793 | INFO     | sum of square deviations: 28242390.0
[2025-06-04 08:01:00] 2025-06-04 12:00:48,793 | INFO     | sum of deviations: 4955841117.0
[2025-06-04 08:01:00] 2025-06-04 12:00:48,793 | INFO     | mean x: 1749036935.0
[2025-06-04 08:01:00] 2025-06-04 12:00:48,793 | INFO     | mean y: 2104649.177777778
[2025-06-04 08:01:00] 2025-06-04 12:00:48,793 | INFO     | -- intersect: -306910630343.316
[2025-06-04 08:01:00] 2025-06-04 12:00:48,793 | INFO     | intersect: -306910630343.316
[2025-06-04 08:01:00] 2025-06-04 12:00:48,793 | INFO     | chi2: 0.5911607504559805
[2025-06-04 08:01:00] 2025-06-04 12:00:48,793 | INFO     | -- intersect: -306910630343.316
[2025-06-04 08:01:00] 2025-06-04 12:00:48,793 | INFO     | current memory leak: 175.48 B/s (using 45 data points, chi2=0.59)
[2025-06-04 08:01:00] 2025-06-04 12:00:48,794 | INFO     | ..............................
[2025-06-04 08:01:00] 2025-06-04 12:00:48,794 | INFO     | . Timing measurements:
[2025-06-04 08:01:00] 2025-06-04 12:00:48,794 | INFO     | . get job = 0 s
[2025-06-04 08:01:00] 2025-06-04 12:00:48,794 | INFO     | . initial setup = 2 s
[2025-06-04 08:01:00] 2025-06-04 12:00:48,794 | INFO     | . payload setup = 4 s
[2025-06-04 08:01:00] 2025-06-04 12:00:48,794 | INFO     | . stage-in = 0 s
[2025-06-04 08:01:00] 2025-06-04 12:00:48,794 | INFO     | . payload execution = 3153 s
[2025-06-04 08:01:00] 2025-06-04 12:00:48,794 | INFO     | . stage-out = 0 s
[2025-06-04 08:01:00] 2025-06-04 12:00:48,794 | INFO     | . log creation = 0 s
[2025-06-04 08:01:00] 2025-06-04 12:00:48,794 | INFO     | ..............................
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | 
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | job summary report
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | --------------------------------------------------
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | PanDA job id: 6678364594
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | task id: 45006595
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | errors: (none)
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | pilot state: finished 
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | transexitcode: 0
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | exeerrorcode: 0
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | exeerrordiag: 
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | exitcode: 0
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | exitmsg: OK
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | cpuconsumptiontime: 20688 s
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | nevents: 400
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | neventsw: 0
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | pid: 2528313
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | pgrp: 2528313
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | corecount: 8
[2025-06-04 08:01:00] 2025-06-04 12:00:49,005 | INFO     | event service: False
[2025-06-04 08:01:00] 2025-06-04 12:00:49,006 | INFO     | sizes: {0: 2405070, 1: 2405212, 3: 2405418, 11: 2405446, 3161: 2430812, 3163: 2439753, 3164: 2439937, 3168: 2440107}
[2025-06-04 08:01:00] 2025-06-04 12:00:49,006 | INFO     | --------------------------------------------------
[2025-06-04 08:01:00] 2025-06-04 12:00:49,006 | INFO     | 
[2025-06-04 08:01:00] 2025-06-04 12:00:49,006 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 08:01:00] 2025-06-04 12:00:49,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,021 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,021 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | job 6678364594 has completed (purged errors)
[2025-06-04 08:01:00] 2025-06-04 12:00:49,022 | INFO     | overall cleanup function is called
[2025-06-04 08:01:00] 2025-06-04 12:00:50,029 | INFO     | --- collectZombieJob: --- 10, [2528313]
[2025-06-04 08:01:00] 2025-06-04 12:00:50,029 | INFO     | zombie collector waiting for pid 2528313
[2025-06-04 08:01:00] 2025-06-04 12:00:50,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:01:00] 2025-06-04 12:00:50,029 | INFO     | collected zombie processes
[2025-06-04 08:01:00] 2025-06-04 12:00:50,029 | INFO     | will attempt to kill all subprocesses of pid=2528313
[2025-06-04 08:01:00] 2025-06-04 12:00:50,332 | INFO     | process IDs to be killed: [2528313] (in reverse order)
[2025-06-04 08:01:00] 2025-06-04 12:00:50,451 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:01:00] 2025-06-04 12:00:50,451 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:01:00] 2025-06-04 12:00:50,467 | INFO     | did not find any defunct processes belonging to 2528313
[2025-06-04 08:01:00] 2025-06-04 12:00:50,481 | INFO     | did not find any defunct processes belonging to 2528313
[2025-06-04 08:01:00] 2025-06-04 12:00:50,482 | INFO     | ready for new job
[2025-06-04 08:01:00] 2025-06-04 12:00:50,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:01:00] 2025-06-04 12:00:50,483 | INFO     | **************************************
[2025-06-04 08:01:00] 2025-06-04 12:00:50,483 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:01:00] 2025-06-04 12:00:50,484 | INFO     | **************************************
[2025-06-04 08:01:00] 2025-06-04 12:00:50,484 | INFO     | 
[2025-06-04 08:01:00] 2025-06-04 12:00:50,499 | INFO     | architecture information:
[2025-06-04 08:01:00] 2025-06-04 12:00:50,499 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:01:00] 2025-06-04 12:00:50,509 | INFO     | cat /etc/os-release:
[2025-06-04 08:01:00] NAME="CentOS Linux"
[2025-06-04 08:01:00] VERSION="7 (Core)"
[2025-06-04 08:01:00] ID="centos"
[2025-06-04 08:01:00] ID_LIKE="rhel fedora"
[2025-06-04 08:01:00] VERSION_ID="7"
[2025-06-04 08:01:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:01:00] ANSI_COLOR="0;31"
[2025-06-04 08:01:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:01:00] HOME_URL="https://www.centos.org/"
[2025-06-04 08:01:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:01:00] 
[2025-06-04 08:01:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:01:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:01:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:01:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:01:00] 
[2025-06-04 08:01:00] 2025-06-04 12:00:50,510 | INFO     | **************************************
[2025-06-04 08:01:00] 2025-06-04 12:00:51,013 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 08:01:00] 2025-06-04 12:00:51,026 | INFO     | sufficient remaining disk space (75564580864 B)
[2025-06-04 08:01:00] 2025-06-04 12:00:51,026 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:01:00] 2025-06-04 12:00:51,026 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:01:00] 2025-06-04 12:00:51,026 | INFO     | update_server=False
[2025-06-04 08:01:00] 2025-06-04 12:00:51,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:01:00] 2025-06-04 12:00:51,027 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:01:00] 2025-06-04 12:00:51,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:01:00] 2025-06-04 12:00:51,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:01:00] 2025-06-04 12:00:51,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:01:00] 2025-06-04 12:00:51,028 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:01:00] 2025-06-04 12:00:51,029 | INFO     | aborting loop
[2025-06-04 08:01:00] 2025-06-04 12:00:51,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:01:00] 2025-06-04 12:00:51,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:01:00] 2025-06-04 12:00:51,350 | INFO     | all job control threads have been joined
[2025-06-04 08:01:00] 2025-06-04 12:00:51,440 | INFO     | all data control threads have been joined
[2025-06-04 08:01:00] 2025-06-04 12:00:52,032 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:52,034 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:52,279 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:52,355 | INFO     | [job] control thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:52,446 | INFO     | [data] control thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:52,450 | INFO     | all payload control threads have been joined
[2025-06-04 08:01:00] 2025-06-04 12:00:52,619 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:52,702 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:53,032 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:53,068 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:53,272 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:53,336 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:53,455 | INFO     | [payload] control thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:53,469 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:53,485 | INFO     | [job] validate thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:53,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:01:00] 2025-06-04 12:00:54,845 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:55,030 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:01:00] 2025-06-04 12:00:55,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725158004544)>', '<ExcThread(monitor, started 139724530374400)>']
[2025-06-04 08:01:00] 2025-06-04 12:00:56,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:01:00] 2025-06-04 12:00:56,054 | INFO     | [monitor] control thread has ended
[2025-06-04 08:01:00] 2025-06-04 12:01:00,687 | INFO     | all workflow threads have been joined
[2025-06-04 08:01:00] 2025-06-04 12:01:00,688 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:01:00] 2025-06-04 12:01:00,688 | INFO     | traces error code: 0
[2025-06-04 08:01:00] 2025-06-04 12:01:00,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:01:00] 2025-06-04 12:01:00,794 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:01:00] 2025-06-04 12:01:00,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:01:00] 2025-06-04 12:01:00,802 [wrapper] pilotpid: 2512946
[2025-06-04 08:01:00] 2025-06-04 12:01:00,806 [wrapper] Pilot exit status: 0
[2025-06-04 08:01:00] 2025-06-04 12:01:00,821 [wrapper] pandaids: 6678364594
[2025-06-04 08:01:00] 2025-06-04 12:01:00,885 [wrapper] cleanup supervisor_pilot 2709002 2512947
[2025-06-04 08:01:00] 2025-06-04 12:01:00,887 [wrapper] Test setup, not cleaning
[2025-06-04 08:01:00] 2025-06-04 12:01:00,889 [wrapper] apfmon messages muted
[2025-06-04 08:01:00] 2025-06-04 12:01:00,891 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:01:00] 2025-06-04 12:01:00,892 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:01:00]  *** Error codes and diagnostics ***
[2025-06-04 08:01:00]     "exeErrorCode": 0,
[2025-06-04 08:01:00]     "exeErrorDiag": "",
[2025-06-04 08:01:00]     "pilotErrorCode": 0,
[2025-06-04 08:01:00]     "pilotErrorDiag": "",
[2025-06-04 08:01:00]  *** Listing of results directory ***
[2025-06-04 08:01:00] total 383916
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:01:00] -rwx------. 1 boincer umatlas     37140 Jun  4 02:29 runpilot2-wrapper.sh
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:29 queuedata.json
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:01:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:07 run_atlas
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:07 job.xml
[2025-06-04 08:01:00] -rw-r--r--. 2 boincer umatlas 212977443 Jun  4 07:07 EVNT.45006593._002164.pool.root.1
[2025-06-04 08:01:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:07 start_atlas.sh
[2025-06-04 08:01:00] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:07 shared
[2025-06-04 08:01:00] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 07:07 input.tar.gz
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:07 boinc_lockfile
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:07 pandaJob.out
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas    986812 Jun  4 07:07 agis_schedconf.cvmfs.json
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas   1603667 Jun  4 07:07 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:01:00] drwx------. 4 boincer umatlas      4096 Jun  4 07:07 pilot3
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas      6933 Jun  4 07:57 init_data.xml
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas        95 Jun  4 07:59 pilot_heartbeat.json
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas 175066717 Jun  4 08:00 HITS.45006595._054078.pool.root.1
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:00 boinc_task_state.xml
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas      1029 Jun  4 08:00 memory_monitor_summary.json
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas    298613 Jun  4 08:00 log.45006595._054078.job.log.tgz.1
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas      7682 Jun  4 08:00 heartbeat.json
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:00 boinc_mmap_file
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:00 wrapper_checkpoint.txt
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas      4476 Jun  4 08:01 pilotlog.txt
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas    326719 Jun  4 08:01 log.45006595._054078.job.log.1
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas       357 Jun  4 08:01 output.list
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:01 runtime_log
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas    645120 Jun  4 08:01 result.tar.gz
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 08:01 runtime_log.err
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas       649 Jun  4 08:01 2dQNDmynwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfUnKDmRFKgQm.diag
[2025-06-04 08:01:00] -rw-r--r--. 1 boincer umatlas     21155 Jun  4 08:01 stderr.txt
[2025-06-04 08:01:00] HITS file was successfully produced:
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas 175066717 Jun  4 08:00 shared/HITS.pool.root.1
[2025-06-04 08:01:00]  *** Contents of shared directory: ***
[2025-06-04 08:01:00] total 380108
[2025-06-04 08:01:00] -rw-r--r--. 2 boincer umatlas 212977443 Jun  4 07:07 ATLAS.root_0
[2025-06-04 08:01:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:07 start_atlas.sh
[2025-06-04 08:01:00] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 07:07 input.tar.gz
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas 175066717 Jun  4 08:00 HITS.pool.root.1
[2025-06-04 08:01:00] -rw-------. 1 boincer umatlas    645120 Jun  4 08:01 result.tar.gz
08:01:02 (2507158): run_atlas exited; CPU time 20767.148415
08:01:02 (2507158): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN