Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:37:56 (1895690): wrapper (7.7.26015): starting
22:37:56 (1895690): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 22:37:56] Arguments: --nthreads 4
[2025-06-05 22:37:56] Threads: 4
[2025-06-05 22:37:56] Checking for CVMFS
[2025-06-05 22:37:56] No cvmfs_config command found, will try listing directly
[2025-06-05 22:37:56] CVMFS is ok
[2025-06-05 22:37:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 22:37:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 22:37:56] Further information can be found at the LHC@home message board.
[2025-06-05 22:37:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 22:37:56] Checking for apptainer binary...
[2025-06-05 22:37:56] which: no apptainer in ((null))
[2025-06-05 22:37:56] apptainer is not installed, using version from CVMFS
[2025-06-05 22:37:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 22:37:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-05 22:37:57] apptainer works
[2025-06-05 22:37:57] Set ATHENA_PROC_NUMBER=4
[2025-06-05 22:37:57] Set ATHENA_CORE_NUMBER=4
[2025-06-05 22:37:57] Starting ATLAS job with PandaID=6678364559
[2025-06-05 22:37:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 00:59:15]  *** The last 200 lines of the pilot log: ***
[2025-06-06 00:59:15] 2025-06-05 22:58:41,078 | INFO     | monitor loop #584: job 0:6678364559 is in state 'finished'
[2025-06-06 00:59:15] 2025-06-05 22:58:41,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 00:59:15] 2025-06-05 22:58:43,582 | INFO     | monitor loop #585: job 0:6678364559 is in state 'finished'
[2025-06-06 00:59:15] 2025-06-05 22:58:43,582 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 00:59:15] 2025-06-05 22:58:46,024 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 00:59:15] 2025-06-05 22:58:46,025 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6678364559/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 00:59:15] 2025-06-05 22:58:46,026 | INFO     | extracted standard info from prmon json
[2025-06-06 00:59:15] 2025-06-05 22:58:46,026 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 00:59:15] 2025-06-05 22:58:46,026 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 00:59:15] 2025-06-05 22:58:46,026 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 00:59:15] 2025-06-05 22:58:46,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 00:59:15] 2025-06-05 22:58:46,031 | INFO     | fitting pss+swap vs Time
[2025-06-06 00:59:15] 2025-06-05 22:58:46,031 | INFO     | sum of square deviations: 814878534.5
[2025-06-06 00:59:15] 2025-06-05 22:58:46,032 | INFO     | sum of deviations: 18495884237.000004
[2025-06-06 00:59:15] 2025-06-05 22:58:46,032 | INFO     | mean x: 1749160102.5
[2025-06-06 00:59:15] 2025-06-05 22:58:46,032 | INFO     | mean y: 2293221.797101449
[2025-06-06 00:59:15] 2025-06-05 22:58:46,032 | INFO     | -- intersect: -39699651789.76224
[2025-06-06 00:59:15] 2025-06-05 22:58:46,032 | INFO     | intersect: -39699651789.76224
[2025-06-06 00:59:15] 2025-06-05 22:58:46,034 | INFO     | chi2: 1.688415369881148
[2025-06-06 00:59:15] 2025-06-05 22:58:46,035 | INFO     | sum of square deviations: 729472282.0
[2025-06-06 00:59:15] 2025-06-05 22:58:46,036 | INFO     | sum of deviations: 17818612704.999992
[2025-06-06 00:59:15] 2025-06-05 22:58:46,036 | INFO     | mean x: 1749159950.0
[2025-06-06 00:59:15] 2025-06-05 22:58:46,036 | INFO     | mean y: 2292011.932330827
[2025-06-06 00:59:15] 2025-06-05 22:58:46,036 | INFO     | -- intersect: -42723942386.8507
[2025-06-06 00:59:15] 2025-06-05 22:58:46,036 | INFO     | intersect: -42723942386.8507
[2025-06-06 00:59:15] 2025-06-05 22:58:46,036 | INFO     | chi2: 1.6908323373923417
[2025-06-06 00:59:15] 2025-06-05 22:58:46,036 | INFO     | current chi2=1.6908323373923417 (change=-0.1431500538498378 %)
[2025-06-06 00:59:15] 2025-06-05 22:58:46,036 | INFO     | right removable region: 132
[2025-06-06 00:59:15] 2025-06-05 22:58:46,037 | INFO     | sum of square deviations: 729472282.0
[2025-06-06 00:59:15] 2025-06-05 22:58:46,037 | INFO     | sum of deviations: -3413777769.999999
[2025-06-06 00:59:15] 2025-06-05 22:58:46,037 | INFO     | mean x: 1749160255.0
[2025-06-06 00:59:15] 2025-06-05 22:58:46,037 | INFO     | mean y: 2331762.022556391
[2025-06-06 00:59:15] 2025-06-05 22:58:46,038 | INFO     | -- intersect: 8188036060.909858
[2025-06-06 00:59:15] 2025-06-05 22:58:46,038 | INFO     | intersect: 8188036060.909858
[2025-06-06 00:59:15] 2025-06-05 22:58:46,038 | INFO     | chi2: 0.005140313532322416
[2025-06-06 00:59:15] 2025-06-05 22:58:46,038 | INFO     | current chi2=0.005140313532322416 (change=99.69555397184733 %)
[2025-06-06 00:59:15] 2025-06-05 22:58:46,038 | INFO     | sum of square deviations: 650252192.0
[2025-06-06 00:59:15] 2025-06-05 22:58:46,039 | INFO     | sum of deviations: -2638273363.0
[2025-06-06 00:59:15] 2025-06-05 22:58:46,039 | INFO     | mean x: 1749160407.5
[2025-06-06 00:59:15] 2025-06-05 22:58:46,039 | INFO     | mean y: 2330259.390625
[2025-06-06 00:59:15] 2025-06-05 22:58:46,039 | INFO     | -- intersect: 7099212619.029753
[2025-06-06 00:59:15] 2025-06-05 22:58:46,039 | INFO     | intersect: 7099212619.029753
[2025-06-06 00:59:15] 2025-06-05 22:58:46,039 | INFO     | chi2: 0.00458680760144629
[2025-06-06 00:59:15] 2025-06-05 22:58:46,039 | INFO     | current chi2=0.00458680760144629 (change=10.767941048647456 %)
[2025-06-06 00:59:15] 2025-06-05 22:58:46,040 | INFO     | left removable region: 20
[2025-06-06 00:59:15] 2025-06-05 22:58:46,040 | INFO     | sum of square deviations: 435610028.0
[2025-06-06 00:59:15] 2025-06-05 22:58:46,040 | INFO     | sum of deviations: -1089537012.5
[2025-06-06 00:59:15] 2025-06-05 22:58:46,040 | INFO     | mean x: 1749160529.5
[2025-06-06 00:59:15] 2025-06-05 22:58:46,041 | INFO     | mean y: 2327066.6875
[2025-06-06 00:59:15] 2025-06-05 22:58:46,041 | INFO     | -- intersect: 4377284058.481885
[2025-06-06 00:59:15] 2025-06-05 22:58:46,041 | INFO     | intersect: 4377284058.481885
[2025-06-06 00:59:15] 2025-06-05 22:58:46,041 | INFO     | chi2: 0.0030333119672959273
[2025-06-06 00:59:15] 2025-06-05 22:58:46,041 | INFO     | -- intersect: 4377284058.481885
[2025-06-06 00:59:15] 2025-06-05 22:58:46,041 | INFO     | current memory leak: -2.50 B/s (using 112 data points, chi2=0.00)
[2025-06-06 00:59:15] 2025-06-05 22:58:46,042 | INFO     | ..............................
[2025-06-06 00:59:15] 2025-06-05 22:58:46,042 | INFO     | . Timing measurements:
[2025-06-06 00:59:15] 2025-06-05 22:58:46,042 | INFO     | . get job = 0 s
[2025-06-06 00:59:15] 2025-06-05 22:58:46,042 | INFO     | . initial setup = 1 s
[2025-06-06 00:59:15] 2025-06-05 22:58:46,042 | INFO     | . payload setup = 9 s
[2025-06-06 00:59:15] 2025-06-05 22:58:46,042 | INFO     | . stage-in = 0 s
[2025-06-06 00:59:15] 2025-06-05 22:58:46,042 | INFO     | . payload execution = 8395 s
[2025-06-06 00:59:15] 2025-06-05 22:58:46,042 | INFO     | . stage-out = 0 s
[2025-06-06 00:59:15] 2025-06-05 22:58:46,042 | INFO     | . log creation = 0 s
[2025-06-06 00:59:15] 2025-06-05 22:58:46,043 | INFO     | ..............................
[2025-06-06 00:59:15] 2025-06-05 22:58:46,191 | INFO     | 
[2025-06-06 00:59:15] 2025-06-05 22:58:46,191 | INFO     | job summary report
[2025-06-06 00:59:15] 2025-06-05 22:58:46,191 | INFO     | --------------------------------------------------
[2025-06-06 00:59:15] 2025-06-05 22:58:46,191 | INFO     | PanDA job id: 6678364559
[2025-06-06 00:59:15] 2025-06-05 22:58:46,191 | INFO     | task id: 45006595
[2025-06-06 00:59:15] 2025-06-05 22:58:46,191 | INFO     | errors: (none)
[2025-06-06 00:59:15] 2025-06-05 22:58:46,191 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 00:59:15] 2025-06-05 22:58:46,191 | INFO     | pilot state: finished 
[2025-06-06 00:59:15] 2025-06-05 22:58:46,192 | INFO     | transexitcode: 0
[2025-06-06 00:59:15] 2025-06-05 22:58:46,192 | INFO     | exeerrorcode: 0
[2025-06-06 00:59:15] 2025-06-05 22:58:46,192 | INFO     | exeerrordiag: 
[2025-06-06 00:59:15] 2025-06-05 22:58:46,192 | INFO     | exitcode: 0
[2025-06-06 00:59:15] 2025-06-05 22:58:46,192 | INFO     | exitmsg: OK
[2025-06-06 00:59:15] 2025-06-05 22:58:46,192 | INFO     | cpuconsumptiontime: 31560 s
[2025-06-06 00:59:15] 2025-06-05 22:58:46,192 | INFO     | nevents: 400
[2025-06-06 00:59:15] 2025-06-05 22:58:46,192 | INFO     | neventsw: 0
[2025-06-06 00:59:15] 2025-06-05 22:58:46,192 | INFO     | pid: 1906995
[2025-06-06 00:59:15] 2025-06-05 22:58:46,192 | INFO     | pgrp: 1906995
[2025-06-06 00:59:15] 2025-06-05 22:58:46,193 | INFO     | corecount: 4
[2025-06-06 00:59:15] 2025-06-05 22:58:46,193 | INFO     | event service: False
[2025-06-06 00:59:15] 2025-06-05 22:58:46,193 | INFO     | sizes: {0: 2397354, 7: 2397560, 11: 2397588, 8408: 2425716, 8409: 2425715, 8410: 2434920, 8419: 2435034}
[2025-06-06 00:59:15] 2025-06-05 22:58:46,193 | INFO     | --------------------------------------------------
[2025-06-06 00:59:15] 2025-06-05 22:58:46,193 | INFO     | 
[2025-06-06 00:59:15] 2025-06-05 22:58:46,193 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-06-06 00:59:15] 2025-06-05 22:58:46,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 00:59:15] 2025-06-05 22:58:46,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,223 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 00:59:15] 2025-06-05 22:58:46,223 | INFO     | job 6678364559 has completed (purged errors)
[2025-06-06 00:59:15] 2025-06-05 22:58:46,223 | INFO     | overall cleanup function is called
[2025-06-06 00:59:15] 2025-06-05 22:58:47,229 | INFO     | --- collectZombieJob: --- 10, [1906995]
[2025-06-06 00:59:15] 2025-06-05 22:58:47,229 | INFO     | zombie collector waiting for pid 1906995
[2025-06-06 00:59:15] 2025-06-05 22:58:47,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 00:59:15] 2025-06-05 22:58:47,229 | INFO     | collected zombie processes
[2025-06-06 00:59:15] 2025-06-05 22:58:47,229 | INFO     | will attempt to kill all subprocesses of pid=1906995
[2025-06-06 00:59:15] 2025-06-05 22:58:49,028 | INFO     | process IDs to be killed: [1906995] (in reverse order)
[2025-06-06 00:59:15] 2025-06-05 22:58:49,215 | INFO     | PID=1899622 has CPU usage=19.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 00:59:15] 2025-06-05 22:58:49,216 | INFO     | .. there are 15 such processes running
[2025-06-06 00:59:15] 2025-06-05 22:58:49,309 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 00:59:15] 2025-06-05 22:58:49,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 00:59:15] 2025-06-05 22:58:49,339 | INFO     | did not find any defunct processes belonging to 1906995
[2025-06-06 00:59:15] 2025-06-05 22:58:49,368 | INFO     | did not find any defunct processes belonging to 1906995
[2025-06-06 00:59:15] 2025-06-05 22:58:49,368 | INFO     | ready for new job
[2025-06-06 00:59:15] 2025-06-05 22:58:49,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 00:59:15] 2025-06-05 22:58:49,371 | INFO     | **************************************
[2025-06-06 00:59:15] 2025-06-05 22:58:49,373 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 00:59:15] 2025-06-05 22:58:49,373 | INFO     | **************************************
[2025-06-06 00:59:15] 2025-06-05 22:58:49,373 | INFO     | 
[2025-06-06 00:59:15] 2025-06-05 22:58:49,381 | INFO     | architecture information:
[2025-06-06 00:59:15] 2025-06-05 22:58:49,382 | INFO     | executing command: cat /etc/os-release
[2025-06-06 00:59:15] 2025-06-05 22:58:49,407 | INFO     | cat /etc/os-release:
[2025-06-06 00:59:15] NAME="CentOS Linux"
[2025-06-06 00:59:15] VERSION="7 (Core)"
[2025-06-06 00:59:15] ID="centos"
[2025-06-06 00:59:15] ID_LIKE="rhel fedora"
[2025-06-06 00:59:15] VERSION_ID="7"
[2025-06-06 00:59:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 00:59:15] ANSI_COLOR="0;31"
[2025-06-06 00:59:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 00:59:15] HOME_URL="https://www.centos.org/"
[2025-06-06 00:59:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 00:59:15] 
[2025-06-06 00:59:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 00:59:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 00:59:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 00:59:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 00:59:15] 
[2025-06-06 00:59:15] 2025-06-05 22:58:49,407 | INFO     | **************************************
[2025-06-06 00:59:15] 2025-06-05 22:58:49,910 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-06-06 00:59:15] 2025-06-05 22:58:49,935 | INFO     | sufficient remaining disk space (3258680606720 B)
[2025-06-06 00:59:15] 2025-06-05 22:58:49,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 00:59:15] 2025-06-05 22:58:49,935 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 00:59:15] 2025-06-05 22:58:49,935 | INFO     | update_server=False
[2025-06-06 00:59:15] 2025-06-05 22:58:49,935 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 00:59:15] 2025-06-05 22:58:49,936 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:59:15] 2025-06-05 22:58:49,936 | INFO     | aborting loop
[2025-06-06 00:59:15] 2025-06-05 22:58:49,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 00:59:15] 2025-06-05 22:58:49,936 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 00:59:15] 2025-06-05 22:58:49,937 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 00:59:15] 2025-06-05 22:58:49,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 00:59:15] 2025-06-05 22:58:49,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 00:59:15] 2025-06-05 22:58:50,159 | INFO     | all job control threads have been joined
[2025-06-06 00:59:15] 2025-06-05 22:58:50,547 | INFO     | all data control threads have been joined
[2025-06-06 00:59:15] 2025-06-05 22:58:50,635 | INFO     | all payload control threads have been joined
[2025-06-06 00:59:15] 2025-06-05 22:58:50,941 | INFO     | [job] retrieve thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:50,941 | INFO     | [job] job monitor thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:51,153 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:59:15] 2025-06-05 22:58:51,164 | INFO     | [job] control thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:51,216 | INFO     | [payload] failed_post thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:51,284 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:51,539 | INFO     | [job] validate thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:51,552 | INFO     | [data] control thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:51,637 | INFO     | [payload] control thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:51,942 | INFO     | [data] copytool_out thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:52,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 00:59:15] 2025-06-05 22:58:52,114 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:52,144 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:52,158 | INFO     | [job] queue monitor thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:52,303 | INFO     | [data] copytool_in thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:52,376 | INFO     | [payload] validate_post thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:58:56,010 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:59:00,092 | INFO     | job.realtimelogging is not enabled
[2025-06-06 00:59:15] 2025-06-05 22:59:01,097 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 00:59:15] 2025-06-05 22:59:02,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23124971640640)>', '<ExcThread(monitor, started 23124726728448)>']
[2025-06-06 00:59:15] 2025-06-05 22:59:03,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 00:59:15] 2025-06-05 22:59:03,002 | INFO     | [monitor] control thread has ended
[2025-06-06 00:59:15] 2025-06-05 22:59:07,256 | INFO     | all workflow threads have been joined
[2025-06-06 00:59:15] 2025-06-05 22:59:07,256 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 00:59:15] 2025-06-05 22:59:07,256 | INFO     | traces error code: 0
[2025-06-06 00:59:15] 2025-06-05 22:59:07,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 00:59:15] 2025-06-05 22:59:07,498 [wrapper] ==== pilot stdout END ====
[2025-06-06 00:59:15] 2025-06-05 22:59:07,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 00:59:15] 2025-06-05 22:59:07,505 [wrapper] pilotpid: 1899622
[2025-06-06 00:59:15] 2025-06-05 22:59:07,510 [wrapper] Pilot exit status: 0
[2025-06-06 00:59:15] 2025-06-05 22:59:07,525 [wrapper] pandaids: 6678364559
[2025-06-06 00:59:15] 2025-06-05 22:59:07,677 [wrapper] cleanup supervisor_pilot 2383579 1899623
[2025-06-06 00:59:15] 2025-06-05 22:59:07,682 [wrapper] Test setup, not cleaning
[2025-06-06 00:59:15] 2025-06-05 22:59:07,686 [wrapper] apfmon messages muted
[2025-06-06 00:59:15] 2025-06-05 22:59:07,690 [wrapper] ==== wrapper stdout END ====
[2025-06-06 00:59:15] 2025-06-05 22:59:07,694 [wrapper] ==== wrapper stderr END ====
[2025-06-06 00:59:15]  *** Error codes and diagnostics ***
[2025-06-06 00:59:15]     "exeErrorCode": 0,
[2025-06-06 00:59:15]     "exeErrorDiag": "",
[2025-06-06 00:59:15]     "pilotErrorCode": 0,
[2025-06-06 00:59:15]     "pilotErrorDiag": "",
[2025-06-06 00:59:15]  *** Listing of results directory ***
[2025-06-06 00:59:15] total 392580
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc      5111 Jun  4 08:26 queuedata.json
[2025-06-06 00:59:15] -rwx------ 1 boinc boinc     37140 Jun  4 08:26 runpilot2-wrapper.sh
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc       100 Jun  5 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 00:59:15] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 22:37 run_atlas
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc       105 Jun  5 22:37 job.xml
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc      6688 Jun  5 22:37 init_data.xml
[2025-06-06 00:59:15] -rw-r--r-- 2 boinc boinc 218117560 Jun  5 22:37 EVNT.45006593._002163.pool.root.1
[2025-06-06 00:59:15] -rw-r--r-- 2 boinc boinc     15093 Jun  5 22:37 start_atlas.sh
[2025-06-06 00:59:15] drwxrwx--x 2 boinc boinc      4096 Jun  5 22:37 shared
[2025-06-06 00:59:15] -rw-r--r-- 2 boinc boinc    508878 Jun  5 22:37 input.tar.gz
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc         0 Jun  5 22:37 boinc_lockfile
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc      2525 Jun  5 22:37 pandaJob.out
[2025-06-06 00:59:15] -rw------- 1 boinc boinc    987599 Jun  5 22:38 agis_schedconf.cvmfs.json
[2025-06-06 00:59:15] -rw------- 1 boinc boinc   1598969 Jun  5 22:38 agis_ddmendpoints.agis.ALL.json
[2025-06-06 00:59:15] drwx------ 4 boinc boinc      4096 Jun  5 22:38 pilot3
[2025-06-06 00:59:15] -rw------- 1 boinc boinc        95 Jun  6 00:57 pilot_heartbeat.json
[2025-06-06 00:59:15] -rw------- 1 boinc boinc 177895100 Jun  6 00:58 HITS.45006595._054043.pool.root.1
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc       529 Jun  6 00:58 boinc_task_state.xml
[2025-06-06 00:59:15] -rw------- 1 boinc boinc      1028 Jun  6 00:58 memory_monitor_summary.json
[2025-06-06 00:59:15] -rw------- 1 boinc boinc    275831 Jun  6 00:58 log.45006595._054043.job.log.tgz.1
[2025-06-06 00:59:15] -rw------- 1 boinc boinc      7694 Jun  6 00:58 heartbeat.json
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc        27 Jun  6 00:59 wrapper_checkpoint.txt
[2025-06-06 00:59:15] -rw------- 1 boinc boinc      4560 Jun  6 00:59 pilotlog.txt
[2025-06-06 00:59:15] -rw------- 1 boinc boinc    795668 Jun  6 00:59 log.45006595._054043.job.log.1
[2025-06-06 00:59:15] -rw------- 1 boinc boinc       357 Jun  6 00:59 output.list
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc       620 Jun  6 00:59 runtime_log
[2025-06-06 00:59:15] -rw------- 1 boinc boinc   1095680 Jun  6 00:59 result.tar.gz
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc      9040 Jun  6 00:59 runtime_log.err
[2025-06-06 00:59:15] -rw------- 1 boinc boinc       662 Jun  6 00:59 jNdLDm3kwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwqaKDmPkPizm.diag
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc      8192 Jun  6 00:59 boinc_mmap_file
[2025-06-06 00:59:15] -rw-r--r-- 1 boinc boinc     20911 Jun  6 00:59 stderr.txt
[2025-06-06 00:59:15] HITS file was successfully produced:
[2025-06-06 00:59:15] -rw------- 1 boinc boinc 177895100 Jun  6 00:58 shared/HITS.pool.root.1
[2025-06-06 00:59:15]  *** Contents of shared directory: ***
[2025-06-06 00:59:15] total 388332
[2025-06-06 00:59:15] -rw-r--r-- 2 boinc boinc 218117560 Jun  5 22:37 ATLAS.root_0
[2025-06-06 00:59:15] -rw-r--r-- 2 boinc boinc     15093 Jun  5 22:37 start_atlas.sh
[2025-06-06 00:59:15] -rw-r--r-- 2 boinc boinc    508878 Jun  5 22:37 input.tar.gz
[2025-06-06 00:59:15] -rw------- 1 boinc boinc 177895100 Jun  6 00:58 HITS.pool.root.1
[2025-06-06 00:59:15] -rw------- 1 boinc boinc   1095680 Jun  6 00:59 result.tar.gz
00:59:16 (1895690): run_atlas exited; CPU time 32064.012717
00:59:16 (1895690): called boinc_finish(0)

</stderr_txt>
]]>

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