Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
16:47:03 (702630): wrapper (7.7.26015): starting
16:47:03 (702630): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 16:47:03] Arguments: --nthreads 8
[2025-06-04 16:47:03] Threads: 8
[2025-06-04 16:47:03] Checking for CVMFS
[2025-06-04 16:47:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:47:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:47:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:47:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:47:04] 2.12.7.0 20002 2523 64288 146788 2 56 2485672 4096001 0 130560 0 1867085 99.990 680902 7939 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 16:47:04] CVMFS is ok
[2025-06-04 16:47:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:47:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 16:47:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 16:47:04] Further information can be found at the LHC@home message board.
[2025-06-04 16:47:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:47:04] Checking for apptainer binary...
[2025-06-04 16:47:04] apptainer is not installed, using version from CVMFS
[2025-06-04 16:47:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:47:05] vm-zhiwei-ec8ce3
[2025-06-04 16:47:05] apptainer works
[2025-06-04 16:47:05] Set ATHENA_PROC_NUMBER=8
[2025-06-04 16:47:05] Set ATHENA_CORE_NUMBER=8
[2025-06-04 16:47:05] Starting ATLAS job with PandaID=6678364521
[2025-06-04 16:47:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:23:54]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:23:54]  protocol_id=None
[2025-06-04 18:23:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 18:23:54]  replicas=None
[2025-06-04 18:23:54]  scope=mc23_13p6TeV
[2025-06-04 18:23:54]  status=None
[2025-06-04 18:23:54]  status_code=0
[2025-06-04 18:23:54]  storage_token=
[2025-06-04 18:23:54]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678364521/log.45006595._054021.job.log.tgz.1
[2025-06-04 18:23:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/2c/log.45006595._054021.job.log.tgz.1
[2025-06-04 18:23:54]  workdir=None
[2025-06-04 18:23:54] ]
[2025-06-04 18:23:54] 2025-06-04 18:23:23,415 | INFO     | transferring file log.45006595._054021.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678364521/log.45006595._054021.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 18:23:54] 2025-06-04 18:23:23,415 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678364521/log.45006595._054021.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._054021.job
[2025-06-04 18:23:54] 2025-06-04 18:23:23,436 | INFO     | adding to output.list: log.45006595._054021.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/2c/log.45006595._054021.job.log.tg
[2025-06-04 18:23:54] 2025-06-04 18:23:23,437 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 18:23:54] 2025-06-04 18:23:23,437 | INFO     | summary of transferred files:
[2025-06-04 18:23:54] 2025-06-04 18:23:23,437 | INFO     |  -- lfn=log.45006595._054021.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 18:23:54] 2025-06-04 18:23:23,438 | INFO     | stage-out finished correctly
[2025-06-04 18:23:54] 2025-06-04 18:23:23,557 | INFO     | monitor loop #422: job 0:6678364521 is in state 'finished'
[2025-06-04 18:23:54] 2025-06-04 18:23:23,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:23:54] 2025-06-04 18:23:25,427 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 18:23:54] 2025-06-04 18:23:26,061 | INFO     | monitor loop #423: job 0:6678364521 is in state 'finished'
[2025-06-04 18:23:54] 2025-06-04 18:23:26,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:23:54] 2025-06-04 18:23:27,690 | INFO     | job 6678364521 has state=finished
[2025-06-04 18:23:54] 2025-06-04 18:23:27,690 | INFO     | preparing for final server update for job 6678364521 in state='finished'
[2025-06-04 18:23:54] 2025-06-04 18:23:27,691 | INFO     | this job has now completed (state=finished)
[2025-06-04 18:23:54] 2025-06-04 18:23:27,691 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 18:23:54] 2025-06-04 18:23:27,691 | INFO     | log transfer has been attempted: DONE
[2025-06-04 18:23:54] 2025-06-04 18:23:27,691 | INFO     | job 6678364521 has finished - writing final server update
[2025-06-04 18:23:54] 2025-06-04 18:23:27,692 | INFO     | total number of processed events: 400 (read)
[2025-06-04 18:23:54] 2025-06-04 18:23:27,698 | INFO     | executing command: lscpu
[2025-06-04 18:23:54] 2025-06-04 18:23:27,746 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 18:23:54] 2025-06-04 18:23:28,566 | INFO     | monitor loop #424: job 0:6678364521 is in state 'finished'
[2025-06-04 18:23:54] 2025-06-04 18:23:28,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:23:54] 2025-06-04 18:23:31,070 | INFO     | monitor loop #425: job 0:6678364521 is in state 'finished'
[2025-06-04 18:23:54] 2025-06-04 18:23:31,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:23:54] 2025-06-04 18:23:33,497 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 18:23:54] 2025-06-04 18:23:33,498 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678364521/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:23:54] 2025-06-04 18:23:33,500 | INFO     | extracted standard info from prmon json
[2025-06-04 18:23:54] 2025-06-04 18:23:33,500 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:23:54] 2025-06-04 18:23:33,500 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:23:54] 2025-06-04 18:23:33,501 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:23:54] 2025-06-04 18:23:33,502 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:23:54] 2025-06-04 18:23:33,506 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:23:54] 2025-06-04 18:23:33,507 | INFO     | sum of square deviations: 204163828.0
[2025-06-04 18:23:54] 2025-06-04 18:23:33,508 | INFO     | sum of deviations: -17689188334.0
[2025-06-04 18:23:54] 2025-06-04 18:23:33,508 | INFO     | mean x: 1749058601.0
[2025-06-04 18:23:54] 2025-06-04 18:23:33,508 | INFO     | mean y: 2639465.747126437
[2025-06-04 18:23:54] 2025-06-04 18:23:33,509 | INFO     | -- intersect: 151544797072.09628
[2025-06-04 18:23:54] 2025-06-04 18:23:33,509 | INFO     | intersect: 151544797072.09628
[2025-06-04 18:23:54] 2025-06-04 18:23:33,510 | INFO     | chi2: 0.16986858827781143
[2025-06-04 18:23:54] 2025-06-04 18:23:33,510 | INFO     | -- intersect: 151544797072.09628
[2025-06-04 18:23:54] 2025-06-04 18:23:33,511 | INFO     | current memory leak: -86.64 B/s (using 87 data points, chi2=0.17)
[2025-06-04 18:23:54] 2025-06-04 18:23:33,512 | INFO     | ..............................
[2025-06-04 18:23:54] 2025-06-04 18:23:33,512 | INFO     | . Timing measurements:
[2025-06-04 18:23:54] 2025-06-04 18:23:33,512 | INFO     | . get job = 0 s
[2025-06-04 18:23:54] 2025-06-04 18:23:33,513 | INFO     | . initial setup = 3 s
[2025-06-04 18:23:54] 2025-06-04 18:23:33,513 | INFO     | . payload setup = 11 s
[2025-06-04 18:23:54] 2025-06-04 18:23:33,513 | INFO     | . stage-in = 0 s
[2025-06-04 18:23:54] 2025-06-04 18:23:33,514 | INFO     | . payload execution = 5730 s
[2025-06-04 18:23:54] 2025-06-04 18:23:33,514 | INFO     | . stage-out = 0 s
[2025-06-04 18:23:54] 2025-06-04 18:23:33,514 | INFO     | . log creation = 0 s
[2025-06-04 18:23:54] 2025-06-04 18:23:33,514 | INFO     | ..............................
[2025-06-04 18:23:54] 2025-06-04 18:23:34,053 | INFO     | 
[2025-06-04 18:23:54] 2025-06-04 18:23:34,054 | INFO     | job summary report
[2025-06-04 18:23:54] 2025-06-04 18:23:34,054 | INFO     | --------------------------------------------------
[2025-06-04 18:23:54] 2025-06-04 18:23:34,055 | INFO     | PanDA job id: 6678364521
[2025-06-04 18:23:54] 2025-06-04 18:23:34,055 | INFO     | task id: 45006595
[2025-06-04 18:23:54] 2025-06-04 18:23:34,055 | INFO     | errors: (none)
[2025-06-04 18:23:54] 2025-06-04 18:23:34,056 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:23:54] 2025-06-04 18:23:34,056 | INFO     | pilot state: finished 
[2025-06-04 18:23:54] 2025-06-04 18:23:34,056 | INFO     | transexitcode: 0
[2025-06-04 18:23:54] 2025-06-04 18:23:34,057 | INFO     | exeerrorcode: 0
[2025-06-04 18:23:54] 2025-06-04 18:23:34,057 | INFO     | exeerrordiag: 
[2025-06-04 18:23:54] 2025-06-04 18:23:34,057 | INFO     | exitcode: 0
[2025-06-04 18:23:54] 2025-06-04 18:23:34,057 | INFO     | exitmsg: OK
[2025-06-04 18:23:54] 2025-06-04 18:23:34,058 | INFO     | cpuconsumptiontime: 42622 s
[2025-06-04 18:23:54] 2025-06-04 18:23:34,058 | INFO     | nevents: 400
[2025-06-04 18:23:54] 2025-06-04 18:23:34,059 | INFO     | neventsw: 0
[2025-06-04 18:23:54] 2025-06-04 18:23:34,059 | INFO     | pid: 712855
[2025-06-04 18:23:54] 2025-06-04 18:23:34,059 | INFO     | pgrp: 712855
[2025-06-04 18:23:54] 2025-06-04 18:23:34,060 | INFO     | corecount: 8
[2025-06-04 18:23:54] 2025-06-04 18:23:34,060 | INFO     | event service: False
[2025-06-04 18:23:54] 2025-06-04 18:23:34,060 | INFO     | sizes: {0: 2397342, 6: 2397548, 11: 2397576, 5745: 2424022, 5746: 2432963, 5748: 2433019, 5756: 2433317}
[2025-06-04 18:23:54] 2025-06-04 18:23:34,061 | INFO     | --------------------------------------------------
[2025-06-04 18:23:54] 2025-06-04 18:23:34,061 | INFO     | 
[2025-06-04 18:23:54] 2025-06-04 18:23:34,061 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 18:23:54] 2025-06-04 18:23:34,115 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,115 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,116 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,116 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,118 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,118 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,122 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,122 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,123 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:23:54] 2025-06-04 18:23:34,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,124 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:23:54] 2025-06-04 18:23:34,125 | INFO     | job 6678364521 has completed (purged errors)
[2025-06-04 18:23:54] 2025-06-04 18:23:34,126 | INFO     | overall cleanup function is called
[2025-06-04 18:23:54] 2025-06-04 18:23:34,225 | INFO     | PID=706294 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 18:23:54] 2025-06-04 18:23:35,142 | INFO     | --- collectZombieJob: --- 10, [712855]
[2025-06-04 18:23:54] 2025-06-04 18:23:35,142 | INFO     | zombie collector waiting for pid 712855
[2025-06-04 18:23:54] 2025-06-04 18:23:35,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:23:54] 2025-06-04 18:23:35,143 | INFO     | collected zombie processes
[2025-06-04 18:23:54] 2025-06-04 18:23:35,143 | INFO     | will attempt to kill all subprocesses of pid=712855
[2025-06-04 18:23:54] 2025-06-04 18:23:35,266 | INFO     | process IDs to be killed: [712855] (in reverse order)
[2025-06-04 18:23:54] 2025-06-04 18:23:35,333 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:23:54] 2025-06-04 18:23:35,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:23:54] 2025-06-04 18:23:35,338 | INFO     | did not find any defunct processes belonging to 712855
[2025-06-04 18:23:54] 2025-06-04 18:23:35,341 | INFO     | did not find any defunct processes belonging to 712855
[2025-06-04 18:23:54] 2025-06-04 18:23:35,342 | INFO     | ready for new job
[2025-06-04 18:23:54] 2025-06-04 18:23:35,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:23:54] 2025-06-04 18:23:35,345 | INFO     | **************************************
[2025-06-04 18:23:54] 2025-06-04 18:23:35,346 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:23:54] 2025-06-04 18:23:35,346 | INFO     | **************************************
[2025-06-04 18:23:54] 2025-06-04 18:23:35,347 | INFO     | 
[2025-06-04 18:23:54] 2025-06-04 18:23:35,347 | INFO     | pilot is running in a VM
[2025-06-04 18:23:54] 2025-06-04 18:23:35,348 | INFO     | architecture information:
[2025-06-04 18:23:54] 2025-06-04 18:23:35,349 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:23:54] 2025-06-04 18:23:35,371 | INFO     | cat /etc/os-release:
[2025-06-04 18:23:54] NAME="CentOS Linux"
[2025-06-04 18:23:54] VERSION="7 (Core)"
[2025-06-04 18:23:54] ID="centos"
[2025-06-04 18:23:54] ID_LIKE="rhel fedora"
[2025-06-04 18:23:54] VERSION_ID="7"
[2025-06-04 18:23:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:23:54] ANSI_COLOR="0;31"
[2025-06-04 18:23:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:23:54] HOME_URL="https://www.centos.org/"
[2025-06-04 18:23:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:23:54] 
[2025-06-04 18:23:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:23:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:23:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:23:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:23:54] 
[2025-06-04 18:23:54] 2025-06-04 18:23:35,372 | INFO     | **************************************
[2025-06-04 18:23:54] 2025-06-04 18:23:35,875 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 18:23:54] 2025-06-04 18:23:35,897 | INFO     | sufficient remaining disk space (32239517696 B)
[2025-06-04 18:23:54] 2025-06-04 18:23:35,898 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:23:54] 2025-06-04 18:23:35,898 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:23:54] 2025-06-04 18:23:35,899 | INFO     | update_server=False
[2025-06-04 18:23:54] 2025-06-04 18:23:35,899 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:23:54] 2025-06-04 18:23:36,038 | INFO     | all job control threads have been joined
[2025-06-04 18:23:54] 2025-06-04 18:23:36,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:23:54] 2025-06-04 18:23:36,083 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 18:23:54] 2025-06-04 18:23:36,084 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 18:23:54] 2025-06-04 18:23:36,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:23:54] 2025-06-04 18:23:36,084 | INFO     | will abort loop
[2025-06-04 18:23:54] 2025-06-04 18:23:36,126 | INFO     | all payload control threads have been joined
[2025-06-04 18:23:54] 2025-06-04 18:23:36,194 | INFO     | all data control threads have been joined
[2025-06-04 18:23:54] 2025-06-04 18:23:36,232 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:23:54] 2025-06-04 18:23:36,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:23:54] 2025-06-04 18:23:36,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:23:54] 2025-06-04 18:23:36,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:23:54] 2025-06-04 18:23:36,905 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:37,043 | INFO     | [job] control thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:37,082 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:37,087 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:37,132 | INFO     | [payload] control thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:37,200 | INFO     | [data] control thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:37,256 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:37,304 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:37,336 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:38,057 | INFO     | [job] validate thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:38,092 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:38,257 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:38,516 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:38,624 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:23:54] 2025-06-04 18:23:39,629 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:40,061 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:46,823 | INFO     | job.realtimelogging is not enabled
[2025-06-04 18:23:54] 2025-06-04 18:23:47,829 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:23:54] 2025-06-04 18:23:49,058 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140402339030848)>', '<ExcThread(monitor, started 140401532987136)>']
[2025-06-04 18:23:54] 2025-06-04 18:23:49,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:23:54] 2025-06-04 18:23:49,300 | INFO     | [monitor] control thread has ended
[2025-06-04 18:23:54] 2025-06-04 18:23:54,084 | INFO     | all workflow threads have been joined
[2025-06-04 18:23:54] 2025-06-04 18:23:54,085 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:23:54] 2025-06-04 18:23:54,086 | INFO     | traces error code: 0
[2025-06-04 18:23:54] 2025-06-04 18:23:54,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:23:54] 2025-06-04 18:23:54,232 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:23:54] 2025-06-04 18:23:54,239 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:23:54] 2025-06-04 18:23:54,245 [wrapper] pilotpid: 706294
[2025-06-04 18:23:54] 2025-06-04 18:23:54,251 [wrapper] Pilot exit status: 0
[2025-06-04 18:23:54] 2025-06-04 18:23:54,276 [wrapper] pandaids: 6678364521
[2025-06-04 18:23:54] 2025-06-04 18:23:54,341 [wrapper] cleanup supervisor_pilot  724511 706295
[2025-06-04 18:23:54] 2025-06-04 18:23:54,349 [wrapper] Test setup, not cleaning
[2025-06-04 18:23:54] 2025-06-04 18:23:54,356 [wrapper] apfmon messages muted
[2025-06-04 18:23:54] 2025-06-04 18:23:54,363 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:23:54] 2025-06-04 18:23:54,369 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:23:54]  *** Error codes and diagnostics ***
[2025-06-04 18:23:54]     "exeErrorCode": 0,
[2025-06-04 18:23:54]     "exeErrorDiag": "",
[2025-06-04 18:23:54]     "pilotErrorCode": 0,
[2025-06-04 18:23:54]     "pilotErrorDiag": "",
[2025-06-04 18:23:54]  *** Listing of results directory ***
[2025-06-04 18:23:54] total 384872
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc    495897 Jun  4 05:59 pilot3.tar.gz
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:26 queuedata.json
[2025-06-04 18:23:54] -rwx------ 1 boinc boinc     37140 Jun  4 06:26 runpilot2-wrapper.sh
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc       100 Jun  4 16:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:23:54] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 16:47 run_atlas
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc       105 Jun  4 16:47 job.xml
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc      6318 Jun  4 16:47 init_data.xml
[2025-06-04 18:23:54] -rw-r--r-- 2 boinc boinc 214470889 Jun  4 16:47 EVNT.45006593._002162.pool.root.1
[2025-06-04 18:23:54] drwxrwx--x 2 boinc boinc      4096 Jun  4 16:47 shared
[2025-06-04 18:23:54] -rw-r--r-- 2 boinc boinc    508880 Jun  4 16:47 input.tar.gz
[2025-06-04 18:23:54] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:47 start_atlas.sh
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc         0 Jun  4 16:47 boinc_lockfile
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc      2525 Jun  4 16:47 pandaJob.out
[2025-06-04 18:23:54] -rw------- 1 boinc boinc    990984 Jun  4 16:47 agis_schedconf.cvmfs.json
[2025-06-04 18:23:54] -rw------- 1 boinc boinc   1598969 Jun  4 16:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:23:54] drwx------ 4 boinc boinc      4096 Jun  4 16:47 pilot3
[2025-06-04 18:23:54] -rw------- 1 boinc boinc 174100142 Jun  4 18:22 HITS.45006595._054021.pool.root.1
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc       529 Jun  4 18:23 boinc_task_state.xml
[2025-06-04 18:23:54] -rw------- 1 boinc boinc      1017 Jun  4 18:23 memory_monitor_summary.json
[2025-06-04 18:23:54] -rw------- 1 boinc boinc    312936 Jun  4 18:23 log.45006595._054021.job.log.tgz.1
[2025-06-04 18:23:54] -rw------- 1 boinc boinc      7677 Jun  4 18:23 heartbeat.json
[2025-06-04 18:23:54] -rw------- 1 boinc boinc        95 Jun  4 18:23 pilot_heartbeat.json
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc      8192 Jun  4 18:23 boinc_mmap_file
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc        27 Jun  4 18:23 wrapper_checkpoint.txt
[2025-06-04 18:23:54] -rw------- 1 boinc boinc      4673 Jun  4 18:23 pilotlog.txt
[2025-06-04 18:23:54] -rw------- 1 boinc boinc    533624 Jun  4 18:23 log.45006595._054021.job.log.1
[2025-06-04 18:23:54] -rw------- 1 boinc boinc       357 Jun  4 18:23 output.list
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc       620 Jun  4 18:23 runtime_log
[2025-06-04 18:23:54] -rw------- 1 boinc boinc    870400 Jun  4 18:23 result.tar.gz
[2025-06-04 18:23:54] -rw------- 1 boinc boinc       651 Jun  4 18:23 x1HKDm3kwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbqaKDm4SK97m.diag
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc      8695 Jun  4 18:23 runtime_log.err
[2025-06-04 18:23:54] -rw-r--r-- 1 boinc boinc     21829 Jun  4 18:23 stderr.txt
[2025-06-04 18:23:54] HITS file was successfully produced:
[2025-06-04 18:23:54] -rw------- 1 boinc boinc 174100142 Jun  4 18:22 shared/HITS.pool.root.1
[2025-06-04 18:23:54]  *** Contents of shared directory: ***
[2025-06-04 18:23:54] total 380844
[2025-06-04 18:23:54] -rw-r--r-- 2 boinc boinc 214470889 Jun  4 16:47 ATLAS.root_0
[2025-06-04 18:23:54] -rw-r--r-- 2 boinc boinc    508880 Jun  4 16:47 input.tar.gz
[2025-06-04 18:23:54] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:47 start_atlas.sh
[2025-06-04 18:23:54] -rw------- 1 boinc boinc 174100142 Jun  4 18:22 HITS.pool.root.1
[2025-06-04 18:23:54] -rw------- 1 boinc boinc    870400 Jun  4 18:23 result.tar.gz
18:23:56 (702630): run_atlas exited; CPU time 42641.263583
18:23:56 (702630): called boinc_finish(0)

</stderr_txt>
]]>

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