Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:10:56 (4156809): wrapper (7.7.26015): starting
04:10:56 (4156809): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 04:10:56] Arguments: --nthreads 8
[2025-06-04 04:10:56] Threads: 8
[2025-06-04 04:10:56] Checking for CVMFS
[2025-06-04 04:10:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:10:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:10:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:10:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:10:57] 2.11.3.0 22611 402508 237408 146777 2 511 43631070 45568000 10492 130560 0 1954922947 99.751 1628774342 21173 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-04 04:10:57] CVMFS is ok
[2025-06-04 04:10:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:10:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:10:57] Further information can be found at the LHC@home message board.
[2025-06-04 04:10:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:10:57] Checking for apptainer binary...
[2025-06-04 04:10:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:10:57] Running /usr/bin/apptainer --version
[2025-06-04 04:10:57] apptainer version 1.3.3-1.el9
[2025-06-04 04:10:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:10:57] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0015.triumf.lcg
[2025-06-04 04:10:57] apptainer works
[2025-06-04 04:10:57] Set ATHENA_PROC_NUMBER=8
[2025-06-04 04:10:57] Set ATHENA_CORE_NUMBER=8
[2025-06-04 04:10:57] Starting ATLAS job with PandaID=6679524669
[2025-06-04 04:10:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:13:57]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:13:57] 2025-06-04 11:13:43,298 | INFO     | extracted standard info from prmon json
[2025-06-04 04:13:57] 2025-06-04 11:13:43,298 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:13:57] 2025-06-04 11:13:43,298 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:13:57] 2025-06-04 11:13:43,299 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:13:57] 2025-06-04 11:13:43,299 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:13:57] 2025-06-04 11:13:43,299 | WARNING  | found no stored workdir sizes
[2025-06-04 04:13:57] 2025-06-04 11:13:43,299 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | WARNING  | wrong length of table data, x=[1749035488.0], y=[795.0] (must be same and length>=4)
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | ..............................
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | . Timing measurements:
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | . get job = 0 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | . initial setup = 2 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | . payload setup = 4 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | . stage-in = 0 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | . payload execution = 15 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | . stage-out = 0 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | . log creation = 0 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | ..............................
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679524669/pilotlog.txt
[2025-06-04 04:13:57] 2025-06-04 11:13:43,311 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-04 04:13:57] - Log from pilotlog.txt -
[2025-06-04 04:13:57] 2025-06-04 11:13:43,298 | INFO     | extracted standard info from prmon json
[2025-06-04 04:13:57] 2025-06-04 11:13:43,298 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:13:57] 2025-06-04 11:13:43,298 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:13:57] 2025-06-04 11:13:43,299 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:13:57] 2025-06-04 11:13:43,299 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:13:57] 2025-06-04 11:13:43,299 | WARNING  | found no stored workdir sizes
[2025-06-04 04:13:57] 2025-06-04 11:13:43,299 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | WARNING  | wrong length of table data, x=[1749035488.0], y=[795.0] (must be same and length>=4)
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | ..............................
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | . Timing measurements:
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | . get job = 0 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | . initial setup = 2 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | . payload setup = 4 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | . stage-in = 0 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | . payload execution = 15 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | . stage-out = 0 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | . log creation = 0 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | ..............................
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679524669/pilotlog.txt
[2025-06-04 04:13:57] 2025-06-04 11:13:43,311 | WARNING  | 
[2025-06-04 04:13:57] [begin log extracts]
[2025-06-04 04:13:57] - Log from pilotlog.txt -
[2025-06-04 04:13:57] 2025-06-04 11:13:43,298 | INFO     | extracted standard info from prmon json
[2025-06-04 04:13:57] 2025-06-04 11:13:43,298 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:13:57] 2025-06-04 11:13:43,298 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:13:57] 2025-06-04 11:13:43,299 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:13:57] 2025-06-04 11:13:43,299 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:13:57] 2025-06-04 11:13:43,299 | WARNING  | found no stored workdir sizes
[2025-06-04 04:13:57] 2025-06-04 11:13:43,299 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | WARNING  | wrong length of table data, x=[1749035488.0], y=[795.0] (must be same and length>=4)
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | ..............................
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | . Timing measurements:
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | . get job = 0 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | . initial setup = 2 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,300 | INFO     | . payload setup = 4 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | . stage-in = 0 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | . payload execution = 15 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | . stage-out = 0 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | . log creation = 0 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | ..............................
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 04:13:57] 2025-06-04 11:13:43,301 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679524669/pilotlog.txt
[2025-06-04 04:13:57] [end log extracts]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,312 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-04 04:13:57] 2025-06-04 11:13:43,312 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-04 04:13:57] 2025-06-04 11:13:43,693 | INFO     | 
[2025-06-04 04:13:57] 2025-06-04 11:13:43,693 | INFO     | job summary report
[2025-06-04 04:13:57] 2025-06-04 11:13:43,693 | INFO     | --------------------------------------------------
[2025-06-04 04:13:57] 2025-06-04 11:13:43,693 | INFO     | PanDA job id: 6679524669
[2025-06-04 04:13:57] 2025-06-04 11:13:43,693 | INFO     | task id: 45006595
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-04 04:11:35,687 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | pilot state: failed 
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | transexitcode: 65
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | exeerrorcode: 65
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | exitcode: 65
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | cpuconsumptiontime: 16 s
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | nevents: 0
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | neventsw: 0
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | pid: 4166690
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | pgrp: 4166690
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | corecount: 8
[2025-06-04 04:13:57] 2025-06-04 11:13:43,694 | INFO     | event service: False
[2025-06-04 04:13:57] 2025-06-04 11:13:43,695 | INFO     | sizes: {0: 2405131, 3: 2405337, 11: 2405365, 22: 2428558, 23: 2432797, 24: 2432797, 143: 2433067}
[2025-06-04 04:13:57] 2025-06-04 11:13:43,695 | INFO     | --------------------------------------------------
[2025-06-04 04:13:57] 2025-06-04 11:13:43,695 | INFO     | 
[2025-06-04 04:13:57] 2025-06-04 11:13:43,695 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-04 04:13:57] 2025-06-04 11:13:43,708 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,709 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,709 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,709 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,709 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,709 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,709 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,709 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,710 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,710 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,710 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,710 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,710 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:13:57] 2025-06-04 11:13:43,710 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,710 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:13:57] 2025-06-04 11:13:43,710 | INFO     | job 6679524669 has completed (purged errors)
[2025-06-04 04:13:57] 2025-06-04 11:13:43,711 | INFO     | overall cleanup function is called
[2025-06-04 04:13:57] 2025-06-04 11:13:44,716 | INFO     | --- collectZombieJob: --- 10, [4166690]
[2025-06-04 04:13:57] 2025-06-04 11:13:44,716 | INFO     | zombie collector waiting for pid 4166690
[2025-06-04 04:13:57] 2025-06-04 11:13:44,716 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:13:57] 2025-06-04 11:13:44,717 | INFO     | collected zombie processes
[2025-06-04 04:13:57] 2025-06-04 11:13:44,717 | INFO     | will attempt to kill all subprocesses of pid=4166690
[2025-06-04 04:13:57] 2025-06-04 11:13:44,895 | INFO     | process IDs to be killed: [4166690] (in reverse order)
[2025-06-04 04:13:57] 2025-06-04 11:13:44,950 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:13:57] 2025-06-04 11:13:44,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:13:57] 2025-06-04 11:13:44,957 | INFO     | did not find any defunct processes belonging to 4166690
[2025-06-04 04:13:57] 2025-06-04 11:13:44,962 | INFO     | did not find any defunct processes belonging to 4166690
[2025-06-04 04:13:57] 2025-06-04 11:13:44,962 | INFO     | ready for new job
[2025-06-04 04:13:57] 2025-06-04 11:13:44,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:13:57] 2025-06-04 11:13:44,963 | INFO     | **************************************
[2025-06-04 04:13:57] 2025-06-04 11:13:44,964 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:13:57] 2025-06-04 11:13:44,964 | INFO     | **************************************
[2025-06-04 04:13:57] 2025-06-04 11:13:44,964 | INFO     | 
[2025-06-04 04:13:57] 2025-06-04 11:13:44,978 | INFO     | architecture information:
[2025-06-04 04:13:57] 2025-06-04 11:13:44,979 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:13:57] 2025-06-04 11:13:44,989 | INFO     | cat /etc/os-release:
[2025-06-04 04:13:57] NAME="CentOS Linux"
[2025-06-04 04:13:57] VERSION="7 (Core)"
[2025-06-04 04:13:57] ID="centos"
[2025-06-04 04:13:57] ID_LIKE="rhel fedora"
[2025-06-04 04:13:57] VERSION_ID="7"
[2025-06-04 04:13:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:13:57] ANSI_COLOR="0;31"
[2025-06-04 04:13:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:13:57] HOME_URL="https://www.centos.org/"
[2025-06-04 04:13:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:13:57] 
[2025-06-04 04:13:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:13:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:13:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:13:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:13:57] 
[2025-06-04 04:13:57] 2025-06-04 11:13:44,989 | INFO     | **************************************
[2025-06-04 04:13:57] 2025-06-04 11:13:45,492 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-04 04:13:57] 2025-06-04 11:13:45,503 | INFO     | sufficient remaining disk space (1106639847424 B)
[2025-06-04 04:13:57] 2025-06-04 11:13:45,504 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:13:57] 2025-06-04 11:13:45,504 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:13:57] 2025-06-04 11:13:45,504 | INFO     | update_server=False
[2025-06-04 04:13:57] 2025-06-04 11:13:45,504 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:13:57] 2025-06-04 11:13:45,720 | INFO     | all job control threads have been joined
[2025-06-04 04:13:57] 2025-06-04 11:13:46,080 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:13:57] 2025-06-04 11:13:46,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:13:57] 2025-06-04 11:13:46,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:13:57] 2025-06-04 11:13:46,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:13:57] 2025-06-04 11:13:46,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:13:57] 2025-06-04 11:13:46,439 | INFO     | aborting loop
[2025-06-04 04:13:57] 2025-06-04 11:13:46,441 | INFO     | all payload control threads have been joined
[2025-06-04 04:13:57] 2025-06-04 11:13:46,499 | INFO     | all data control threads have been joined
[2025-06-04 04:13:57] 2025-06-04 11:13:46,509 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:46,570 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:46,601 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:46,683 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:46,726 | INFO     | [job] control thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:46,812 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:46,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:13:57] 2025-06-04 11:13:47,127 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:47,133 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:47,443 | INFO     | [payload] control thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:47,444 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:47,504 | INFO     | [data] control thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:47,779 | INFO     | [job] validate thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:47,977 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:48,152 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:48,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:13:57] 2025-06-04 11:13:49,400 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:50,943 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:13:57] 2025-06-04 11:13:52,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140227064919872)>', '<ExcThread(monitor, started 140226253027072)>']
[2025-06-04 04:13:57] 2025-06-04 11:13:53,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:13:57] 2025-06-04 11:13:53,110 | INFO     | [monitor] control thread has ended
[2025-06-04 04:13:57] 2025-06-04 11:13:57,291 | INFO     | all workflow threads have been joined
[2025-06-04 04:13:57] 2025-06-04 11:13:57,292 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:13:57] 2025-06-04 11:13:57,292 | INFO     | traces error code: 0
[2025-06-04 04:13:57] 2025-06-04 11:13:57,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:13:57] 2025-06-04 11:13:57,426 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:13:57] 2025-06-04 11:13:57,432 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:13:57] 2025-06-04 11:13:57,436 [wrapper] pilotpid: 4160377
[2025-06-04 04:13:57] 2025-06-04 11:13:57,440 [wrapper] Pilot exit status: 0
[2025-06-04 04:13:57] 2025-06-04 11:13:57,456 [wrapper] pandaids: 6679524669
[2025-06-04 04:13:57] 2025-06-04 11:13:57,505 [wrapper] cleanup supervisor_pilot 4160383 4160378
[2025-06-04 04:13:57] 2025-06-04 11:13:57,510 [wrapper] Test setup, not cleaning
[2025-06-04 04:13:57] 2025-06-04 11:13:57,514 [wrapper] apfmon messages muted
[2025-06-04 04:13:57] 2025-06-04 11:13:57,519 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:13:57] 2025-06-04 11:13:57,524 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:13:57]  *** Error codes and diagnostics ***
[2025-06-04 04:13:57]     "exeErrorCode": 65,
[2025-06-04 04:13:57]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 04:13:57]     "pilotErrorCode": 1305,
[2025-06-04 04:13:57]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 04:13:57]  *** Listing of results directory ***
[2025-06-04 04:13:57] total 216352
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc    495897 Jun  4 02:04 pilot3.tar.gz
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc      5111 Jun  4 02:08 queuedata.json
[2025-06-04 04:13:57] -rwx------. 1 boinc boinc     37140 Jun  4 02:08 runpilot2-wrapper.sh
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc       100 Jun  4 04:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:13:57] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 04:10 run_atlas
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc       105 Jun  4 04:10 job.xml
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc      6453 Jun  4 04:10 init_data.xml
[2025-06-04 04:13:57] -rw-r--r--. 2 boinc boinc 217525014 Jun  4 04:10 EVNT.45006593._001825.pool.root.1
[2025-06-04 04:13:57] -rw-r--r--. 2 boinc boinc     15093 Jun  4 04:10 start_atlas.sh
[2025-06-04 04:13:57] drwxrwx--x. 2 boinc boinc      4096 Jun  4 04:10 shared
[2025-06-04 04:13:57] -rw-r--r--. 2 boinc boinc    508882 Jun  4 04:10 input.tar.gz
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc         0 Jun  4 04:10 boinc_lockfile
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc      2525 Jun  4 04:10 pandaJob.out
[2025-06-04 04:13:57] -rw-------. 1 boinc boinc    986812 Jun  4 04:11 agis_schedconf.cvmfs.json
[2025-06-04 04:13:57] -rw-------. 1 boinc boinc   1603667 Jun  4 04:11 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:13:57] drwx------. 4 boinc boinc      4096 Jun  4 04:11 pilot3
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc       522 Jun  4 04:11 boinc_task_state.xml
[2025-06-04 04:13:57] -rw-------. 1 boinc boinc       986 Jun  4 04:11 memory_monitor_summary.json
[2025-06-04 04:13:57] -rw-------. 1 boinc boinc     20383 Jun  4 04:11 log.45006595._056433.job.log.tgz.1
[2025-06-04 04:13:57] -rw-------. 1 boinc boinc        95 Jun  4 04:13 pilot_heartbeat.json
[2025-06-04 04:13:57] -rw-------. 1 boinc boinc      8317 Jun  4 04:13 heartbeat.json
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc      8192 Jun  4 04:13 boinc_mmap_file
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc        22 Jun  4 04:13 wrapper_checkpoint.txt
[2025-06-04 04:13:57] -rw-------. 1 boinc boinc      4352 Jun  4 04:13 pilotlog.txt
[2025-06-04 04:13:57] -rw-------. 1 boinc boinc     72604 Jun  4 04:13 log.45006595._056433.job.log.1
[2025-06-04 04:13:57] -rw-------. 1 boinc boinc       188 Jun  4 04:13 output.list
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc       620 Jun  4 04:13 runtime_log
[2025-06-04 04:13:57] -rw-------. 1 boinc boinc    112640 Jun  4 04:13 result.tar.gz
[2025-06-04 04:13:57] -rw-------. 1 boinc boinc       645 Jun  4 04:13 vSrNDm7Hzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZwnKDm6UoQZm.diag
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc      8647 Jun  4 04:13 runtime_log.err
[2025-06-04 04:13:57] -rw-r--r--. 1 boinc boinc     21596 Jun  4 04:13 stderr.txt
[2025-06-04 04:13:57] No HITS result produced
[2025-06-04 04:13:57]  *** Contents of shared directory: ***
[2025-06-04 04:13:57] total 213060
[2025-06-04 04:13:57] -rw-r--r--. 2 boinc boinc 217525014 Jun  4 04:10 ATLAS.root_0
[2025-06-04 04:13:57] -rw-r--r--. 2 boinc boinc     15093 Jun  4 04:10 start_atlas.sh
[2025-06-04 04:13:57] -rw-r--r--. 2 boinc boinc    508882 Jun  4 04:10 input.tar.gz
[2025-06-04 04:13:57] -rw-------. 1 boinc boinc    112640 Jun  4 04:13 result.tar.gz
04:13:59 (4156809): run_atlas exited; CPU time 20.737045
04:13:59 (4156809): called boinc_finish(0)

</stderr_txt>
]]>

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