Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:08:11 (254637): wrapper (7.7.26015): starting
07:08:11 (254637): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:08:11] Arguments: --nthreads 8
[2025-06-04 07:08:11] Threads: 8
[2025-06-04 07:08:11] Checking for CVMFS
[2025-06-04 07:08:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:08:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:08:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:08:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:08:12] 2.11.2.0 7082 28703 201672 146777 0 275 17215901 18432001 8693 130560 0 119316937 99.589 99792145 30797 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 07:08:12] CVMFS is ok
[2025-06-04 07:08:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:08:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:08:12] Further information can be found at the LHC@home message board.
[2025-06-04 07:08:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:08:12] Checking for apptainer binary...
[2025-06-04 07:08:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:08:12] Running /usr/bin/apptainer --version
[2025-06-04 07:08:12] apptainer version 1.3.2-1.el7
[2025-06-04 07:08:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:08:12] c-211-35-3.aglt2.org
[2025-06-04 07:08:12] apptainer works
[2025-06-04 07:08:12] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:08:12] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:08:12] Starting ATLAS job with PandaID=6678364729
[2025-06-04 07:08:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:19:02]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:19:02]  filesize=289402
[2025-06-04 08:19:02]  filetype=log
[2025-06-04 08:19:02]  guid=d7a1d765-10a1-4f8e-be67-be28afaafe94
[2025-06-04 08:19:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:19:02]  is_altstaged=None
[2025-06-04 08:19:02]  is_tar=False
[2025-06-04 08:19:02]  lfn=log.45006595._054213.job.log.tgz.1
[2025-06-04 08:19:02]  mtime=0
[2025-06-04 08:19:02]  protocol_id=None
[2025-06-04 08:19:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:19:02]  replicas=None
[2025-06-04 08:19:02]  scope=mc23_13p6TeV
[2025-06-04 08:19:02]  status=None
[2025-06-04 08:19:02]  status_code=0
[2025-06-04 08:19:02]  storage_token=
[2025-06-04 08:19:02]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6678364729/log.45006595._054213.job.log.tgz.1
[2025-06-04 08:19:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/75/log.45006595._054213.job.log.tgz.1
[2025-06-04 08:19:02]  workdir=None
[2025-06-04 08:19:02] ]
[2025-06-04 08:19:02] 2025-06-04 12:18:37,798 | INFO     | transferring file log.45006595._054213.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6678364729/log.45006595._054213.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:19:02] 2025-06-04 12:18:37,798 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6678364729/log.45006595._054213.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._054213.job
[2025-06-04 08:19:02] 2025-06-04 12:18:37,814 | INFO     | adding to output.list: log.45006595._054213.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/75/log.45006595._054213.job.log.tg
[2025-06-04 08:19:02] 2025-06-04 12:18:37,814 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:19:02] 2025-06-04 12:18:37,814 | INFO     | summary of transferred files:
[2025-06-04 08:19:02] 2025-06-04 12:18:37,814 | INFO     |  -- lfn=log.45006595._054213.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:19:02] 2025-06-04 12:18:37,815 | INFO     | stage-out finished correctly
[2025-06-04 08:19:02] 2025-06-04 12:18:37,866 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:19:02] 2025-06-04 12:18:37,916 | INFO     | job 6678364729 has state=finished
[2025-06-04 08:19:02] 2025-06-04 12:18:37,916 | INFO     | preparing for final server update for job 6678364729 in state='finished'
[2025-06-04 08:19:02] 2025-06-04 12:18:37,917 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:19:02] 2025-06-04 12:18:37,917 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:19:02] 2025-06-04 12:18:37,917 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:19:02] 2025-06-04 12:18:37,917 | INFO     | job 6678364729 has finished - writing final server update
[2025-06-04 08:19:02] 2025-06-04 12:18:37,917 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:19:02] 2025-06-04 12:18:37,921 | INFO     | executing command: lscpu
[2025-06-04 08:19:02] 2025-06-04 12:18:37,977 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:19:02] 2025-06-04 12:18:38,587 | INFO     | monitor loop #316: job 0:6678364729 is in state 'finished'
[2025-06-04 08:19:02] 2025-06-04 12:18:38,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:19:02] 2025-06-04 12:18:40,966 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:19:02] 2025-06-04 12:18:40,966 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6678364729/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:19:02] 2025-06-04 12:18:40,967 | INFO     | extracted standard info from prmon json
[2025-06-04 08:19:02] 2025-06-04 12:18:40,967 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:19:02] 2025-06-04 12:18:40,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:19:02] 2025-06-04 12:18:40,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:19:02] 2025-06-04 12:18:40,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:19:02] 2025-06-04 12:18:40,970 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:19:02] 2025-06-04 12:18:40,970 | INFO     | sum of square deviations: 73882315.5
[2025-06-04 08:19:02] 2025-06-04 12:18:40,970 | INFO     | sum of deviations: -176657799.50000006
[2025-06-04 08:19:02] 2025-06-04 12:18:40,970 | INFO     | mean x: 1749037499.5
[2025-06-04 08:19:02] 2025-06-04 12:18:40,970 | INFO     | mean y: 2484961.14516129
[2025-06-04 08:19:02] 2025-06-04 12:18:40,970 | INFO     | -- intersect: 4184556324.4154754
[2025-06-04 08:19:02] 2025-06-04 12:18:40,970 | INFO     | intersect: 4184556324.4154754
[2025-06-04 08:19:02] 2025-06-04 12:18:40,971 | INFO     | chi2: 0.015447219428022388
[2025-06-04 08:19:02] 2025-06-04 12:18:40,971 | INFO     | -- intersect: 4184556324.4154754
[2025-06-04 08:19:02] 2025-06-04 12:18:40,971 | INFO     | current memory leak: -2.39 B/s (using 62 data points, chi2=0.02)
[2025-06-04 08:19:02] 2025-06-04 12:18:40,971 | INFO     | ..............................
[2025-06-04 08:19:02] 2025-06-04 12:18:40,971 | INFO     | . Timing measurements:
[2025-06-04 08:19:02] 2025-06-04 12:18:40,971 | INFO     | . get job = 0 s
[2025-06-04 08:19:02] 2025-06-04 12:18:40,971 | INFO     | . initial setup = 2 s
[2025-06-04 08:19:02] 2025-06-04 12:18:40,972 | INFO     | . payload setup = 5 s
[2025-06-04 08:19:02] 2025-06-04 12:18:40,972 | INFO     | . stage-in = 0 s
[2025-06-04 08:19:02] 2025-06-04 12:18:40,972 | INFO     | . payload execution = 4183 s
[2025-06-04 08:19:02] 2025-06-04 12:18:40,972 | INFO     | . stage-out = 0 s
[2025-06-04 08:19:02] 2025-06-04 12:18:40,972 | INFO     | . log creation = 0 s
[2025-06-04 08:19:02] 2025-06-04 12:18:40,972 | INFO     | ..............................
[2025-06-04 08:19:02] 2025-06-04 12:18:41,481 | INFO     | 
[2025-06-04 08:19:02] 2025-06-04 12:18:41,481 | INFO     | job summary report
[2025-06-04 08:19:02] 2025-06-04 12:18:41,481 | INFO     | --------------------------------------------------
[2025-06-04 08:19:02] 2025-06-04 12:18:41,481 | INFO     | PanDA job id: 6678364729
[2025-06-04 08:19:02] 2025-06-04 12:18:41,481 | INFO     | task id: 45006595
[2025-06-04 08:19:02] 2025-06-04 12:18:41,481 | INFO     | errors: (none)
[2025-06-04 08:19:02] 2025-06-04 12:18:41,481 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:19:02] 2025-06-04 12:18:41,481 | INFO     | pilot state: finished 
[2025-06-04 08:19:02] 2025-06-04 12:18:41,481 | INFO     | transexitcode: 0
[2025-06-04 08:19:02] 2025-06-04 12:18:41,481 | INFO     | exeerrorcode: 0
[2025-06-04 08:19:02] 2025-06-04 12:18:41,481 | INFO     | exeerrordiag: 
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | exitcode: 0
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | exitmsg: OK
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | cpuconsumptiontime: 30606 s
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | nevents: 400
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | neventsw: 0
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | pid: 265939
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | pgrp: 265939
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | corecount: 8
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | event service: False
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | sizes: {0: 2405013, 1: 2405212, 11: 2405212, 15: 2405446, 22: 2405474, 4191: 2431379, 4192: 2440503, 4195: 2440617}
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | --------------------------------------------------
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | 
[2025-06-04 08:19:02] 2025-06-04 12:18:41,482 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-04 08:19:02] 2025-06-04 12:18:41,502 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,502 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,502 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,502 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,502 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,503 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:19:02] 2025-06-04 12:18:41,504 | INFO     | job 6678364729 has completed (purged errors)
[2025-06-04 08:19:02] 2025-06-04 12:18:41,504 | INFO     | overall cleanup function is called
[2025-06-04 08:19:02] 2025-06-04 12:18:42,511 | INFO     | --- collectZombieJob: --- 10, [265939]
[2025-06-04 08:19:02] 2025-06-04 12:18:42,511 | INFO     | zombie collector waiting for pid 265939
[2025-06-04 08:19:02] 2025-06-04 12:18:42,511 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:19:02] 2025-06-04 12:18:42,511 | INFO     | collected zombie processes
[2025-06-04 08:19:02] 2025-06-04 12:18:42,512 | INFO     | will attempt to kill all subprocesses of pid=265939
[2025-06-04 08:19:02] 2025-06-04 12:18:42,736 | INFO     | process IDs to be killed: [265939] (in reverse order)
[2025-06-04 08:19:02] 2025-06-04 12:18:42,837 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:19:02] 2025-06-04 12:18:42,837 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:19:02] 2025-06-04 12:18:42,847 | INFO     | did not find any defunct processes belonging to 265939
[2025-06-04 08:19:02] 2025-06-04 12:18:42,855 | INFO     | did not find any defunct processes belonging to 265939
[2025-06-04 08:19:02] 2025-06-04 12:18:42,856 | INFO     | ready for new job
[2025-06-04 08:19:02] 2025-06-04 12:18:42,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:19:02] 2025-06-04 12:18:42,857 | INFO     | **************************************
[2025-06-04 08:19:02] 2025-06-04 12:18:42,857 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:19:02] 2025-06-04 12:18:42,857 | INFO     | **************************************
[2025-06-04 08:19:02] 2025-06-04 12:18:42,857 | INFO     | 
[2025-06-04 08:19:02] 2025-06-04 12:18:42,862 | INFO     | architecture information:
[2025-06-04 08:19:02] 2025-06-04 12:18:42,862 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:19:02] 2025-06-04 12:18:42,878 | INFO     | cat /etc/os-release:
[2025-06-04 08:19:02] NAME="CentOS Linux"
[2025-06-04 08:19:02] VERSION="7 (Core)"
[2025-06-04 08:19:02] ID="centos"
[2025-06-04 08:19:02] ID_LIKE="rhel fedora"
[2025-06-04 08:19:02] VERSION_ID="7"
[2025-06-04 08:19:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:19:02] ANSI_COLOR="0;31"
[2025-06-04 08:19:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:19:02] HOME_URL="https://www.centos.org/"
[2025-06-04 08:19:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:19:02] 
[2025-06-04 08:19:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:19:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:19:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:19:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:19:02] 
[2025-06-04 08:19:02] 2025-06-04 12:18:42,878 | INFO     | **************************************
[2025-06-04 08:19:02] 2025-06-04 12:18:43,381 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-04 08:19:02] 2025-06-04 12:18:43,396 | INFO     | sufficient remaining disk space (103731429376 B)
[2025-06-04 08:19:02] 2025-06-04 12:18:43,396 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:19:02] 2025-06-04 12:18:43,396 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:19:02] 2025-06-04 12:18:43,396 | INFO     | update_server=False
[2025-06-04 08:19:02] 2025-06-04 12:18:43,396 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:19:02] 2025-06-04 12:18:43,396 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:19:02] 2025-06-04 12:18:43,580 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:19:02] 2025-06-04 12:18:43,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:19:02] 2025-06-04 12:18:43,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:19:02] 2025-06-04 12:18:43,593 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:19:02] 2025-06-04 12:18:43,593 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:19:02] 2025-06-04 12:18:43,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:19:02] 2025-06-04 12:18:43,593 | INFO     | will abort loop
[2025-06-04 08:19:02] 2025-06-04 12:18:43,723 | INFO     | all job control threads have been joined
[2025-06-04 08:19:02] 2025-06-04 12:18:43,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:19:02] 2025-06-04 12:18:43,935 | INFO     | all data control threads have been joined
[2025-06-04 08:19:02] 2025-06-04 12:18:44,348 | INFO     | all payload control threads have been joined
[2025-06-04 08:19:02] 2025-06-04 12:18:44,400 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:44,430 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:44,468 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:44,599 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:44,627 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:44,729 | INFO     | [job] control thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:44,943 | INFO     | [data] control thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:45,353 | INFO     | [payload] control thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:45,402 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:45,602 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:45,635 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:45,644 | INFO     | [job] validate thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:45,795 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:46,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:19:02] 2025-06-04 12:18:47,084 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:47,926 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:53,998 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:19:02] 2025-06-04 12:18:55,006 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:19:02] 2025-06-04 12:18:57,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140027633526592)>', '<ExcThread(monitor, started 140027040347904)>']
[2025-06-04 08:19:02] 2025-06-04 12:18:57,653 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:19:02] 2025-06-04 12:18:57,653 | INFO     | [monitor] control thread has ended
[2025-06-04 08:19:02] 2025-06-04 12:19:02,039 | INFO     | all workflow threads have been joined
[2025-06-04 08:19:02] 2025-06-04 12:19:02,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:19:02] 2025-06-04 12:19:02,039 | INFO     | traces error code: 0
[2025-06-04 08:19:02] 2025-06-04 12:19:02,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:19:02] 2025-06-04 12:19:02,160 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:19:02] 2025-06-04 12:19:02,162 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:19:02] 2025-06-04 12:19:02,164 [wrapper] pilotpid: 258326
[2025-06-04 08:19:02] 2025-06-04 12:19:02,167 [wrapper] Pilot exit status: 0
[2025-06-04 08:19:02] 2025-06-04 12:19:02,173 [wrapper] pandaids: 6678364729
[2025-06-04 08:19:02] 2025-06-04 12:19:02,220 [wrapper] cleanup supervisor_pilot 122423 258327
[2025-06-04 08:19:02] 2025-06-04 12:19:02,222 [wrapper] Test setup, not cleaning
[2025-06-04 08:19:02] 2025-06-04 12:19:02,224 [wrapper] apfmon messages muted
[2025-06-04 08:19:02] 2025-06-04 12:19:02,226 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:19:02] 2025-06-04 12:19:02,228 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:19:02]  *** Error codes and diagnostics ***
[2025-06-04 08:19:02]     "exeErrorCode": 0,
[2025-06-04 08:19:02]     "exeErrorDiag": "",
[2025-06-04 08:19:02]     "pilotErrorCode": 0,
[2025-06-04 08:19:02]     "pilotErrorDiag": "",
[2025-06-04 08:19:02]  *** Listing of results directory ***
[2025-06-04 08:19:02] total 393080
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:28 queuedata.json
[2025-06-04 08:19:02] -rwx------ 1 boincer umatlas     37140 Jun  4 02:28 runpilot2-wrapper.sh
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:19:02] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:08 run_atlas
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:08 job.xml
[2025-06-04 08:19:02] -rw-r--r-- 2 boincer umatlas 216855846 Jun  4 07:08 EVNT.45006593._002170.pool.root.1
[2025-06-04 08:19:02] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:08 start_atlas.sh
[2025-06-04 08:19:02] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:08 shared
[2025-06-04 08:19:02] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 07:08 input.tar.gz
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:08 boinc_lockfile
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 07:08 pandaJob.out
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas    986812 Jun  4 07:08 agis_schedconf.cvmfs.json
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas   1603667 Jun  4 07:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:19:02] drwx------ 4 boincer umatlas      4096 Jun  4 07:08 pilot3
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas      6299 Jun  4 08:12 init_data.xml
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas       529 Jun  4 08:18 boinc_task_state.xml
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas 180407661 Jun  4 08:18 HITS.45006595._054213.pool.root.1
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas        95 Jun  4 08:18 pilot_heartbeat.json
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas      1053 Jun  4 08:18 memory_monitor_summary.json
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas    289402 Jun  4 08:18 log.45006595._054213.job.log.tgz.1
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas      7742 Jun  4 08:18 heartbeat.json
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:18 boinc_mmap_file
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:18 wrapper_checkpoint.txt
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas      4612 Jun  4 08:19 pilotlog.txt
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas    421748 Jun  4 08:19 log.45006595._054213.job.log.1
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas       357 Jun  4 08:19 output.list
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:19 runtime_log
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas    727040 Jun  4 08:19 result.tar.gz
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas       659 Jun  4 08:19 V3NMDmpmwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9TnKDmvP6AEm.diag
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 08:19 runtime_log.err
[2025-06-04 08:19:02] -rw-r--r-- 1 boincer umatlas     21074 Jun  4 08:19 stderr.txt
[2025-06-04 08:19:02] HITS file was successfully produced:
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas 180407661 Jun  4 08:18 shared/HITS.pool.root.1
[2025-06-04 08:19:02]  *** Contents of shared directory: ***
[2025-06-04 08:19:02] total 389188
[2025-06-04 08:19:02] -rw-r--r-- 2 boincer umatlas 216855846 Jun  4 07:08 ATLAS.root_0
[2025-06-04 08:19:02] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:08 start_atlas.sh
[2025-06-04 08:19:02] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 07:08 input.tar.gz
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas 180407661 Jun  4 08:18 HITS.pool.root.1
[2025-06-04 08:19:02] -rw------- 1 boincer umatlas    727040 Jun  4 08:19 result.tar.gz
08:19:03 (254637): run_atlas exited; CPU time 30703.174773
08:19:03 (254637): called boinc_finish(0)

</stderr_txt>
]]>

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