Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:40:14 (3642601): wrapper (7.7.26015): starting
05:40:14 (3642601): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 05:40:14] Arguments: --nthreads 4
[2025-06-06 05:40:14] Threads: 4
[2025-06-06 05:40:14] Checking for CVMFS
[2025-06-06 05:40:14] No cvmfs_config command found, will try listing directly
[2025-06-06 05:40:14] CVMFS is ok
[2025-06-06 05:40:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 05:40:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 05:40:14] Further information can be found at the LHC@home message board.
[2025-06-06 05:40:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 05:40:14] Checking for apptainer binary...
[2025-06-06 05:40:14] which: no apptainer in ((null))
[2025-06-06 05:40:14] apptainer is not installed, using version from CVMFS
[2025-06-06 05:40:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 05:40:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-06-06 05:40:15] apptainer works
[2025-06-06 05:40:15] Set ATHENA_PROC_NUMBER=4
[2025-06-06 05:40:15] Set ATHENA_CORE_NUMBER=4
[2025-06-06 05:40:15] Starting ATLAS job with PandaID=6678364731
[2025-06-06 05:40:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 08:17:36]  *** The last 200 lines of the pilot log: ***
[2025-06-06 08:17:36] 2025-06-06 06:16:03,133 | INFO     | executing command: lscpu
[2025-06-06 08:17:36] 2025-06-06 06:16:03,180 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 08:17:36] 2025-06-06 06:16:04,753 | INFO     | monitor loop #687: job 0:6678364731 is in state 'finished'
[2025-06-06 08:17:36] 2025-06-06 06:16:04,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:17:36] 2025-06-06 06:16:06,382 | INFO     | PID=3646305 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 08:17:36] 2025-06-06 06:16:06,382 | INFO     | .. there are 2 such processes running
[2025-06-06 08:17:36] 2025-06-06 06:16:06,659 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 08:17:36] 2025-06-06 06:16:06,659 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6678364731/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 08:17:36] 2025-06-06 06:16:06,660 | INFO     | extracted standard info from prmon json
[2025-06-06 08:17:36] 2025-06-06 06:16:06,660 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 08:17:36] 2025-06-06 06:16:06,661 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 08:17:36] 2025-06-06 06:16:06,661 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 08:17:36] 2025-06-06 06:16:06,661 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 08:17:36] 2025-06-06 06:16:06,665 | INFO     | fitting pss+swap vs Time
[2025-06-06 08:17:36] 2025-06-06 06:16:06,665 | INFO     | sum of square deviations: 1110539892.0
[2025-06-06 08:17:36] 2025-06-06 06:16:06,666 | INFO     | sum of deviations: -15991180988.0
[2025-06-06 08:17:36] 2025-06-06 06:16:06,666 | INFO     | mean x: 1749185886.0
[2025-06-06 08:17:36] 2025-06-06 06:16:06,666 | INFO     | mean y: 2391199.3071895423
[2025-06-06 08:17:36] 2025-06-06 06:16:06,667 | INFO     | -- intersect: 25189733217.52722
[2025-06-06 08:17:36] 2025-06-06 06:16:06,667 | INFO     | intersect: 25189733217.52722
[2025-06-06 08:17:36] 2025-06-06 06:16:06,667 | INFO     | chi2: 1.9058554421862037
[2025-06-06 08:17:36] 2025-06-06 06:16:06,668 | INFO     | sum of square deviations: 1005179777.0
[2025-06-06 08:17:36] 2025-06-06 06:16:06,668 | INFO     | sum of deviations: -15047229686.499996
[2025-06-06 08:17:36] 2025-06-06 06:16:06,669 | INFO     | mean x: 1749185733.5
[2025-06-06 08:17:36] 2025-06-06 06:16:06,669 | INFO     | mean y: 2392565.641891892
[2025-06-06 08:17:36] 2025-06-06 06:16:06,669 | INFO     | -- intersect: 26187160801.705868
[2025-06-06 08:17:36] 2025-06-06 06:16:06,669 | INFO     | intersect: 26187160801.705868
[2025-06-06 08:17:36] 2025-06-06 06:16:06,669 | INFO     | chi2: 1.902841021768928
[2025-06-06 08:17:36] 2025-06-06 06:16:06,670 | INFO     | current chi2=1.902841021768928 (change=0.15816626752225732 %)
[2025-06-06 08:17:36] 2025-06-06 06:16:06,670 | INFO     | right removable region: 147
[2025-06-06 08:17:36] 2025-06-06 06:16:06,670 | INFO     | sum of square deviations: 1005179777.0
[2025-06-06 08:17:36] 2025-06-06 06:16:06,671 | INFO     | sum of deviations: -38895510519.999985
[2025-06-06 08:17:36] 2025-06-06 06:16:06,671 | INFO     | mean x: 1749186038.5
[2025-06-06 08:17:36] 2025-06-06 06:16:06,671 | INFO     | mean y: 2423874.0135135134
[2025-06-06 08:17:36] 2025-06-06 06:16:06,672 | INFO     | -- intersect: 67687315192.6277
[2025-06-06 08:17:36] 2025-06-06 06:16:06,672 | INFO     | intersect: 67687315192.6277
[2025-06-06 08:17:36] 2025-06-06 06:16:06,672 | INFO     | chi2: 0.31984571683983515
[2025-06-06 08:17:36] 2025-06-06 06:16:06,672 | INFO     | current chi2=0.31984571683983515 (change=83.21773468438191 %)
[2025-06-06 08:17:36] 2025-06-06 06:16:06,673 | INFO     | sum of square deviations: 906703512.0
[2025-06-06 08:17:36] 2025-06-06 06:16:06,673 | INFO     | sum of deviations: -33600542953.000004
[2025-06-06 08:17:36] 2025-06-06 06:16:06,674 | INFO     | mean x: 1749186191.0
[2025-06-06 08:17:36] 2025-06-06 06:16:06,674 | INFO     | mean y: 2415629.1818181816
[2025-06-06 08:17:36] 2025-06-06 06:16:06,674 | INFO     | -- intersect: 64823611274.32449
[2025-06-06 08:17:36] 2025-06-06 06:16:06,674 | INFO     | intersect: 64823611274.32449
[2025-06-06 08:17:36] 2025-06-06 06:16:06,674 | INFO     | chi2: 0.31248261475744105
[2025-06-06 08:17:36] 2025-06-06 06:16:06,674 | INFO     | current chi2=0.31248261475744105 (change=2.3020793134713835 %)
[2025-06-06 08:17:36] 2025-06-06 06:16:06,675 | INFO     | left removable region: 20
[2025-06-06 08:17:36] 2025-06-06 06:16:06,675 | INFO     | sum of square deviations: 635130048.0
[2025-06-06 08:17:36] 2025-06-06 06:16:06,676 | INFO     | sum of deviations: -18125560678.999992
[2025-06-06 08:17:36] 2025-06-06 06:16:06,676 | INFO     | mean x: 1749186313.0
[2025-06-06 08:17:36] 2025-06-06 06:16:06,676 | INFO     | mean y: 2392479.7007874018
[2025-06-06 08:17:36] 2025-06-06 06:16:06,676 | INFO     | -- intersect: 49921275635.98593
[2025-06-06 08:17:36] 2025-06-06 06:16:06,676 | INFO     | intersect: 49921275635.98593
[2025-06-06 08:17:36] 2025-06-06 06:16:06,677 | INFO     | chi2: 0.2422120891382608
[2025-06-06 08:17:36] 2025-06-06 06:16:06,677 | INFO     | -- intersect: 49921275635.98593
[2025-06-06 08:17:36] 2025-06-06 06:16:06,677 | INFO     | current memory leak: -28.54 B/s (using 127 data points, chi2=0.24)
[2025-06-06 08:17:36] 2025-06-06 06:16:06,678 | INFO     | ..............................
[2025-06-06 08:17:36] 2025-06-06 06:16:06,678 | INFO     | . Timing measurements:
[2025-06-06 08:17:36] 2025-06-06 06:16:06,678 | INFO     | . get job = 0 s
[2025-06-06 08:17:36] 2025-06-06 06:16:06,678 | INFO     | . initial setup = 1 s
[2025-06-06 08:17:36] 2025-06-06 06:16:06,678 | INFO     | . payload setup = 6 s
[2025-06-06 08:17:36] 2025-06-06 06:16:06,678 | INFO     | . stage-in = 0 s
[2025-06-06 08:17:36] 2025-06-06 06:16:06,679 | INFO     | . payload execution = 9310 s
[2025-06-06 08:17:36] 2025-06-06 06:16:06,679 | INFO     | . stage-out = 0 s
[2025-06-06 08:17:36] 2025-06-06 06:16:06,679 | INFO     | . log creation = 0 s
[2025-06-06 08:17:36] 2025-06-06 06:16:06,679 | INFO     | ..............................
[2025-06-06 08:17:36] 2025-06-06 06:16:07,064 | INFO     | 
[2025-06-06 08:17:36] 2025-06-06 06:16:07,064 | INFO     | job summary report
[2025-06-06 08:17:36] 2025-06-06 06:16:07,064 | INFO     | --------------------------------------------------
[2025-06-06 08:17:36] 2025-06-06 06:16:07,064 | INFO     | PanDA job id: 6678364731
[2025-06-06 08:17:36] 2025-06-06 06:16:07,065 | INFO     | task id: 45006595
[2025-06-06 08:17:36] 2025-06-06 06:16:07,065 | INFO     | errors: (none)
[2025-06-06 08:17:36] 2025-06-06 06:16:07,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 08:17:36] 2025-06-06 06:16:07,065 | INFO     | pilot state: finished 
[2025-06-06 08:17:36] 2025-06-06 06:16:07,065 | INFO     | transexitcode: 0
[2025-06-06 08:17:36] 2025-06-06 06:16:07,065 | INFO     | exeerrorcode: 0
[2025-06-06 08:17:36] 2025-06-06 06:16:07,065 | INFO     | exeerrordiag: 
[2025-06-06 08:17:36] 2025-06-06 06:16:07,065 | INFO     | exitcode: 0
[2025-06-06 08:17:36] 2025-06-06 06:16:07,065 | INFO     | exitmsg: OK
[2025-06-06 08:17:36] 2025-06-06 06:16:07,066 | INFO     | cpuconsumptiontime: 35260 s
[2025-06-06 08:17:36] 2025-06-06 06:16:07,066 | INFO     | nevents: 400
[2025-06-06 08:17:36] 2025-06-06 06:16:07,066 | INFO     | neventsw: 0
[2025-06-06 08:17:36] 2025-06-06 06:16:07,066 | INFO     | pid: 3653226
[2025-06-06 08:17:36] 2025-06-06 06:16:07,066 | INFO     | pgrp: 3653226
[2025-06-06 08:17:36] 2025-06-06 06:16:07,066 | INFO     | corecount: 4
[2025-06-06 08:17:36] 2025-06-06 06:16:07,066 | INFO     | event service: False
[2025-06-06 08:17:36] 2025-06-06 06:16:07,066 | INFO     | sizes: {0: 2396514, 1: 2397381, 5: 2397587, 12: 2397643, 9320: 2425907, 9321: 2425906, 9322: 2435109, 9327: 2435223}
[2025-06-06 08:17:36] 2025-06-06 06:16:07,066 | INFO     | --------------------------------------------------
[2025-06-06 08:17:36] 2025-06-06 06:16:07,066 | INFO     | 
[2025-06-06 08:17:36] 2025-06-06 06:16:07,067 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-06 08:17:36] 2025-06-06 06:16:07,085 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,085 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,086 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,086 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,087 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,087 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,087 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,087 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 08:17:36] 2025-06-06 06:16:07,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,088 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 08:17:36] 2025-06-06 06:16:07,088 | INFO     | job 6678364731 has completed (purged errors)
[2025-06-06 08:17:36] 2025-06-06 06:16:07,088 | INFO     | overall cleanup function is called
[2025-06-06 08:17:36] 2025-06-06 06:16:08,096 | INFO     | --- collectZombieJob: --- 10, [3653226]
[2025-06-06 08:17:36] 2025-06-06 06:16:08,096 | INFO     | zombie collector waiting for pid 3653226
[2025-06-06 08:17:36] 2025-06-06 06:16:08,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 08:17:36] 2025-06-06 06:16:08,096 | INFO     | collected zombie processes
[2025-06-06 08:17:36] 2025-06-06 06:16:08,097 | INFO     | will attempt to kill all subprocesses of pid=3653226
[2025-06-06 08:17:36] 2025-06-06 06:16:08,367 | INFO     | process IDs to be killed: [3653226] (in reverse order)
[2025-06-06 08:17:36] 2025-06-06 06:16:08,444 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 08:17:36] 2025-06-06 06:16:08,444 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 08:17:36] 2025-06-06 06:16:08,453 | INFO     | did not find any defunct processes belonging to 3653226
[2025-06-06 08:17:36] 2025-06-06 06:16:08,461 | INFO     | did not find any defunct processes belonging to 3653226
[2025-06-06 08:17:36] 2025-06-06 06:16:08,461 | INFO     | ready for new job
[2025-06-06 08:17:36] 2025-06-06 06:16:08,462 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 08:17:36] 2025-06-06 06:16:08,463 | INFO     | **************************************
[2025-06-06 08:17:36] 2025-06-06 06:16:08,464 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 08:17:36] 2025-06-06 06:16:08,464 | INFO     | **************************************
[2025-06-06 08:17:36] 2025-06-06 06:16:08,464 | INFO     | 
[2025-06-06 08:17:36] 2025-06-06 06:16:08,467 | INFO     | architecture information:
[2025-06-06 08:17:36] 2025-06-06 06:16:08,467 | INFO     | executing command: cat /etc/os-release
[2025-06-06 08:17:36] 2025-06-06 06:16:08,481 | INFO     | cat /etc/os-release:
[2025-06-06 08:17:36] NAME="CentOS Linux"
[2025-06-06 08:17:36] VERSION="7 (Core)"
[2025-06-06 08:17:36] ID="centos"
[2025-06-06 08:17:36] ID_LIKE="rhel fedora"
[2025-06-06 08:17:36] VERSION_ID="7"
[2025-06-06 08:17:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 08:17:36] ANSI_COLOR="0;31"
[2025-06-06 08:17:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 08:17:36] HOME_URL="https://www.centos.org/"
[2025-06-06 08:17:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 08:17:36] 
[2025-06-06 08:17:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 08:17:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 08:17:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 08:17:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 08:17:36] 
[2025-06-06 08:17:36] 2025-06-06 06:16:08,481 | INFO     | **************************************
[2025-06-06 08:17:36] 2025-06-06 06:16:08,984 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-06 08:17:36] 2025-06-06 06:16:09,000 | INFO     | sufficient remaining disk space (1650921046016 B)
[2025-06-06 08:17:36] 2025-06-06 06:16:09,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 08:17:36] 2025-06-06 06:16:09,001 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 08:17:36] 2025-06-06 06:16:09,001 | INFO     | update_server=False
[2025-06-06 08:17:36] 2025-06-06 06:16:09,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 08:17:36] 2025-06-06 06:16:09,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:17:36] 2025-06-06 06:16:09,002 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 08:17:36] 2025-06-06 06:16:09,002 | INFO     | aborting loop
[2025-06-06 08:17:36] 2025-06-06 06:16:09,003 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 08:17:36] 2025-06-06 06:16:09,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 08:17:36] 2025-06-06 06:16:09,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 08:17:36] 2025-06-06 06:16:09,363 | INFO     | all data control threads have been joined
[2025-06-06 08:17:36] 2025-06-06 06:16:09,510 | INFO     | all job control threads have been joined
[2025-06-06 08:17:36] 2025-06-06 06:16:09,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 08:17:36] 2025-06-06 06:16:09,833 | INFO     | all payload control threads have been joined
[2025-06-06 08:17:36] 2025-06-06 06:16:10,007 | INFO     | [job] retrieve thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:10,007 | INFO     | [job] job monitor thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:10,107 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:10,336 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:10,354 | INFO     | [job] validate thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:10,368 | INFO     | [data] control thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:10,516 | INFO     | [job] control thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:10,538 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:10,838 | INFO     | [payload] control thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:10,858 | INFO     | [payload] failed_post thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:11,305 | INFO     | [payload] validate_post thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:11,318 | INFO     | [data] copytool_in thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:11,708 | INFO     | [data] copytool_out thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:11,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:17:36] 2025-06-06 06:16:12,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 08:17:36] 2025-06-06 06:16:12,809 | INFO     | [job] queue monitor thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:16,315 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:19,786 | INFO     | job.realtimelogging is not enabled
[2025-06-06 08:17:36] 2025-06-06 06:16:20,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 08:17:36] 2025-06-06 06:16:21,875 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23314892195648)>', '<ExcThread(monitor, started 23314653214464)>']
[2025-06-06 08:17:36] 2025-06-06 06:16:22,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 08:17:36] 2025-06-06 06:16:22,065 | INFO     | [monitor] control thread has ended
[2025-06-06 08:17:36] 2025-06-06 06:16:26,901 | INFO     | all workflow threads have been joined
[2025-06-06 08:17:36] 2025-06-06 06:16:26,901 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 08:17:36] 2025-06-06 06:16:26,902 | INFO     | traces error code: 0
[2025-06-06 08:17:36] 2025-06-06 06:16:26,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 08:17:36] 2025-06-06 06:16:27,039 [wrapper] ==== pilot stdout END ====
[2025-06-06 08:17:36] 2025-06-06 06:16:27,041 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 08:17:36] 2025-06-06 06:16:27,043 [wrapper] pilotpid: 3646305
[2025-06-06 08:17:36] 2025-06-06 06:16:27,046 [wrapper] Pilot exit status: 0
[2025-06-06 08:17:36] 2025-06-06 06:16:27,055 [wrapper] pandaids: 6678364731
[2025-06-06 08:17:36] 2025-06-06 06:16:27,102 [wrapper] cleanup supervisor_pilot 3755916 3646306
[2025-06-06 08:17:36] 2025-06-06 06:16:27,105 [wrapper] Test setup, not cleaning
[2025-06-06 08:17:36] 2025-06-06 06:16:27,108 [wrapper] apfmon messages muted
[2025-06-06 08:17:36] 2025-06-06 06:16:27,110 [wrapper] ==== wrapper stdout END ====
[2025-06-06 08:17:36] 2025-06-06 06:16:27,112 [wrapper] ==== wrapper stderr END ====
[2025-06-06 08:17:36]  *** Error codes and diagnostics ***
[2025-06-06 08:17:36]     "exeErrorCode": 0,
[2025-06-06 08:17:36]     "exeErrorDiag": "",
[2025-06-06 08:17:36]     "pilotErrorCode": 0,
[2025-06-06 08:17:36]     "pilotErrorDiag": "",
[2025-06-06 08:17:36]  *** Listing of results directory ***
[2025-06-06 08:17:36] total 391172
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc      5111 Jun  4 08:28 queuedata.json
[2025-06-06 08:17:36] -rwx------ 1 boinc boinc     37140 Jun  4 08:28 runpilot2-wrapper.sh
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc       100 Jun  6 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 08:17:36] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 05:40 run_atlas
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc       105 Jun  6 05:40 job.xml
[2025-06-06 08:17:36] -rw-r--r-- 2 boinc boinc 216855846 Jun  6 05:40 EVNT.45006593._002170.pool.root.1
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc      6422 Jun  6 05:40 init_data.xml
[2025-06-06 08:17:36] -rw-r--r-- 2 boinc boinc     15093 Jun  6 05:40 start_atlas.sh
[2025-06-06 08:17:36] drwxrwx--x 2 boinc boinc      4096 Jun  6 05:40 shared
[2025-06-06 08:17:36] -rw-r--r-- 2 boinc boinc    508876 Jun  6 05:40 input.tar.gz
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc         0 Jun  6 05:40 boinc_lockfile
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc      2525 Jun  6 05:40 pandaJob.out
[2025-06-06 08:17:36] -rw------- 1 boinc boinc    987721 Jun  6 05:40 agis_schedconf.cvmfs.json
[2025-06-06 08:17:36] -rw------- 1 boinc boinc   1598969 Jun  6 05:40 agis_ddmendpoints.agis.ALL.json
[2025-06-06 08:17:36] drwx------ 4 boinc boinc      4096 Jun  6 05:40 pilot3
[2025-06-06 08:17:36] -rw------- 1 boinc boinc 177533807 Jun  6 08:15 HITS.45006595._054215.pool.root.1
[2025-06-06 08:17:36] -rw------- 1 boinc boinc        95 Jun  6 08:15 pilot_heartbeat.json
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc       528 Jun  6 08:15 boinc_task_state.xml
[2025-06-06 08:17:36] -rw------- 1 boinc boinc      1033 Jun  6 08:15 memory_monitor_summary.json
[2025-06-06 08:17:36] -rw------- 1 boinc boinc    281734 Jun  6 08:16 log.45006595._054215.job.log.tgz.1
[2025-06-06 08:17:36] -rw------- 1 boinc boinc      7727 Jun  6 08:16 heartbeat.json
[2025-06-06 08:17:36] -rw------- 1 boinc boinc      4559 Jun  6 08:16 pilotlog.txt
[2025-06-06 08:17:36] -rw------- 1 boinc boinc    885572 Jun  6 08:16 log.45006595._054215.job.log.1
[2025-06-06 08:17:36] -rw------- 1 boinc boinc       357 Jun  6 08:16 output.list
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc       620 Jun  6 08:16 runtime_log
[2025-06-06 08:17:36] -rw------- 1 boinc boinc   1187840 Jun  6 08:16 result.tar.gz
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc      9025 Jun  6 08:16 runtime_log.err
[2025-06-06 08:17:36] -rw------- 1 boinc boinc       663 Jun  6 08:16 aPQMDmpmwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBUnKDmPSIkPm.diag
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc        26 Jun  6 08:17 wrapper_checkpoint.txt
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc      8192 Jun  6 08:17 boinc_mmap_file
[2025-06-06 08:17:36] -rw-r--r-- 1 boinc boinc     20985 Jun  6 08:17 stderr.txt
[2025-06-06 08:17:36] HITS file was successfully produced:
[2025-06-06 08:17:36] -rw------- 1 boinc boinc 177533807 Jun  6 08:15 shared/HITS.pool.root.1
[2025-06-06 08:17:36]  *** Contents of shared directory: ***
[2025-06-06 08:17:36] total 386832
[2025-06-06 08:17:36] -rw-r--r-- 2 boinc boinc 216855846 Jun  6 05:40 ATLAS.root_0
[2025-06-06 08:17:36] -rw-r--r-- 2 boinc boinc     15093 Jun  6 05:40 start_atlas.sh
[2025-06-06 08:17:36] -rw-r--r-- 2 boinc boinc    508876 Jun  6 05:40 input.tar.gz
[2025-06-06 08:17:36] -rw------- 1 boinc boinc 177533807 Jun  6 08:15 HITS.pool.root.1
[2025-06-06 08:17:36] -rw------- 1 boinc boinc   1187840 Jun  6 08:16 result.tar.gz
08:17:38 (3642601): run_atlas exited; CPU time 35602.963570
08:17:38 (3642601): called boinc_finish(0)

</stderr_txt>
]]>

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