Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:07:38 (20224): wrapper (7.7.26015): starting
07:07:38 (20224): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 07:07:38] Arguments: --nthreads 10
[2025-06-04 07:07:38] Threads: 10
[2025-06-04 07:07:38] Checking for CVMFS
[2025-06-04 07:07:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:07:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:07:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:07:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:07:38] 2.11.2.0 5464 110294 293684 146778 1 62 9421152 18432001 4058 130560 0 178577049 99.263 466854554 37707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 07:07:38] CVMFS is ok
[2025-06-04 07:07:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:07:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:07:38] Further information can be found at the LHC@home message board.
[2025-06-04 07:07:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:07:38] Checking for apptainer binary...
[2025-06-04 07:07:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:07:38] Running /usr/bin/apptainer --version
[2025-06-04 07:07:38] apptainer version 1.3.2-1.el7
[2025-06-04 07:07:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:07:39] c-210-12.aglt2.org
[2025-06-04 07:07:39] apptainer works
[2025-06-04 07:07:39] Set ATHENA_PROC_NUMBER=10
[2025-06-04 07:07:39] Set ATHENA_CORE_NUMBER=10
[2025-06-04 07:07:39] Starting ATLAS job with PandaID=6678364296
[2025-06-04 07:07:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:28:01]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:28:01]  domain=
[2025-06-04 08:28:01]  filesize=336777
[2025-06-04 08:28:01]  filetype=log
[2025-06-04 08:28:01]  guid=8442b061-793c-4563-bf44-d34ce905f88c
[2025-06-04 08:28:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:28:01]  is_altstaged=None
[2025-06-04 08:28:01]  is_tar=False
[2025-06-04 08:28:01]  lfn=log.45006595._053796.job.log.tgz.1
[2025-06-04 08:28:01]  mtime=0
[2025-06-04 08:28:01]  protocol_id=None
[2025-06-04 08:28:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:28:01]  replicas=None
[2025-06-04 08:28:01]  scope=mc23_13p6TeV
[2025-06-04 08:28:01]  status=None
[2025-06-04 08:28:01]  status_code=0
[2025-06-04 08:28:01]  storage_token=
[2025-06-04 08:28:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678364296/log.45006595._053796.job.log.tgz.1
[2025-06-04 08:28:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/db/log.45006595._053796.job.log.tgz.1
[2025-06-04 08:28:01]  workdir=None
[2025-06-04 08:28:01] ]
[2025-06-04 08:28:01] 2025-06-04 12:27:43,098 | INFO     | transferring file log.45006595._053796.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678364296/log.45006595._053796.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:28:01] 2025-06-04 12:27:43,098 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678364296/log.45006595._053796.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._053796.job
[2025-06-04 08:28:01] 2025-06-04 12:27:43,121 | INFO     | adding to output.list: log.45006595._053796.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/db/log.45006595._053796.job.log.tg
[2025-06-04 08:28:01] 2025-06-04 12:27:43,122 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:28:01] 2025-06-04 12:27:43,122 | INFO     | summary of transferred files:
[2025-06-04 08:28:01] 2025-06-04 12:27:43,122 | INFO     |  -- lfn=log.45006595._053796.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:28:01] 2025-06-04 12:27:43,123 | INFO     | stage-out finished correctly
[2025-06-04 08:28:01] 2025-06-04 12:27:43,796 | INFO     | monitor loop #360: job 0:6678364296 is in state 'finished'
[2025-06-04 08:28:01] 2025-06-04 12:27:43,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:28:01] 2025-06-04 12:27:44,344 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:28:01] 2025-06-04 12:27:44,431 | INFO     | job 6678364296 has state=finished
[2025-06-04 08:28:01] 2025-06-04 12:27:44,431 | INFO     | preparing for final server update for job 6678364296 in state='finished'
[2025-06-04 08:28:01] 2025-06-04 12:27:44,432 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:28:01] 2025-06-04 12:27:44,432 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:28:01] 2025-06-04 12:27:44,432 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:28:01] 2025-06-04 12:27:44,432 | INFO     | job 6678364296 has finished - writing final server update
[2025-06-04 08:28:01] 2025-06-04 12:27:44,433 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:28:01] 2025-06-04 12:27:44,436 | INFO     | executing command: lscpu
[2025-06-04 08:28:01] 2025-06-04 12:27:44,478 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:28:01] 2025-06-04 12:27:46,299 | INFO     | monitor loop #361: job 0:6678364296 is in state 'finished'
[2025-06-04 08:28:01] 2025-06-04 12:27:46,300 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:28:01] 2025-06-04 12:27:48,145 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:28:01] 2025-06-04 12:27:48,145 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678364296/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:28:01] 2025-06-04 12:27:48,146 | INFO     | extracted standard info from prmon json
[2025-06-04 08:28:01] 2025-06-04 12:27:48,146 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:28:01] 2025-06-04 12:27:48,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:28:01] 2025-06-04 12:27:48,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:28:01] 2025-06-04 12:27:48,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:28:01] 2025-06-04 12:27:48,147 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:28:01] 2025-06-04 12:27:48,147 | INFO     | sum of square deviations: 115715658.0
[2025-06-04 08:28:01] 2025-06-04 12:27:48,147 | INFO     | sum of deviations: -504130138.49999994
[2025-06-04 08:28:01] 2025-06-04 12:27:48,148 | INFO     | mean x: 1749037764.5
[2025-06-04 08:28:01] 2025-06-04 12:27:48,148 | INFO     | mean y: 2578695.5416666665
[2025-06-04 08:28:01] 2025-06-04 12:27:48,148 | INFO     | -- intersect: 7622486542.92318
[2025-06-04 08:28:01] 2025-06-04 12:27:48,148 | INFO     | intersect: 7622486542.92318
[2025-06-04 08:28:01] 2025-06-04 12:27:48,148 | INFO     | chi2: 0.008190696627105278
[2025-06-04 08:28:01] 2025-06-04 12:27:48,148 | INFO     | -- intersect: 7622486542.92318
[2025-06-04 08:28:01] 2025-06-04 12:27:48,148 | INFO     | current memory leak: -4.36 B/s (using 72 data points, chi2=0.01)
[2025-06-04 08:28:01] 2025-06-04 12:27:48,148 | INFO     | ..............................
[2025-06-04 08:28:01] 2025-06-04 12:27:48,148 | INFO     | . Timing measurements:
[2025-06-04 08:28:01] 2025-06-04 12:27:48,148 | INFO     | . get job = 0 s
[2025-06-04 08:28:01] 2025-06-04 12:27:48,148 | INFO     | . initial setup = 2 s
[2025-06-04 08:28:01] 2025-06-04 12:27:48,148 | INFO     | . payload setup = 5 s
[2025-06-04 08:28:01] 2025-06-04 12:27:48,149 | INFO     | . stage-in = 0 s
[2025-06-04 08:28:01] 2025-06-04 12:27:48,149 | INFO     | . payload execution = 4769 s
[2025-06-04 08:28:01] 2025-06-04 12:27:48,149 | INFO     | . stage-out = 0 s
[2025-06-04 08:28:01] 2025-06-04 12:27:48,149 | INFO     | . log creation = 0 s
[2025-06-04 08:28:01] 2025-06-04 12:27:48,149 | INFO     | ..............................
[2025-06-04 08:28:01] 2025-06-04 12:27:48,199 | INFO     | 
[2025-06-04 08:28:01] 2025-06-04 12:27:48,200 | INFO     | job summary report
[2025-06-04 08:28:01] 2025-06-04 12:27:48,200 | INFO     | --------------------------------------------------
[2025-06-04 08:28:01] 2025-06-04 12:27:48,200 | INFO     | PanDA job id: 6678364296
[2025-06-04 08:28:01] 2025-06-04 12:27:48,200 | INFO     | task id: 45006595
[2025-06-04 08:28:01] 2025-06-04 12:27:48,200 | INFO     | errors: (none)
[2025-06-04 08:28:01] 2025-06-04 12:27:48,200 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:28:01] 2025-06-04 12:27:48,200 | INFO     | pilot state: finished 
[2025-06-04 08:28:01] 2025-06-04 12:27:48,200 | INFO     | transexitcode: 0
[2025-06-04 08:28:01] 2025-06-04 12:27:48,200 | INFO     | exeerrorcode: 0
[2025-06-04 08:28:01] 2025-06-04 12:27:48,200 | INFO     | exeerrordiag: 
[2025-06-04 08:28:01] 2025-06-04 12:27:48,201 | INFO     | exitcode: 0
[2025-06-04 08:28:01] 2025-06-04 12:27:48,201 | INFO     | exitmsg: OK
[2025-06-04 08:28:01] 2025-06-04 12:27:48,201 | INFO     | cpuconsumptiontime: 41176 s
[2025-06-04 08:28:01] 2025-06-04 12:27:48,201 | INFO     | nevents: 400
[2025-06-04 08:28:01] 2025-06-04 12:27:48,201 | INFO     | neventsw: 0
[2025-06-04 08:28:01] 2025-06-04 12:27:48,201 | INFO     | pid: 31301
[2025-06-04 08:28:01] 2025-06-04 12:27:48,201 | INFO     | pgrp: 31301
[2025-06-04 08:28:01] 2025-06-04 12:27:48,201 | INFO     | corecount: 10
[2025-06-04 08:28:01] 2025-06-04 12:27:48,201 | INFO     | event service: False
[2025-06-04 08:28:01] 2025-06-04 12:27:48,201 | INFO     | sizes: {0: 2405183, 1: 2405183, 4: 2405417, 11: 2405445, 4779: 2431644, 4780: 2440585, 4781: 2440769, 4785: 2440939}
[2025-06-04 08:28:01] 2025-06-04 12:27:48,201 | INFO     | --------------------------------------------------
[2025-06-04 08:28:01] 2025-06-04 12:27:48,202 | INFO     | 
[2025-06-04 08:28:01] 2025-06-04 12:27:48,202 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:28:01] 2025-06-04 12:27:48,222 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,223 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,223 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,223 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,223 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,223 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,223 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,223 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,224 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,224 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,224 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,224 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,224 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,224 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,225 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:28:01] 2025-06-04 12:27:48,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,225 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:28:01] 2025-06-04 12:27:48,225 | INFO     | job 6678364296 has completed (purged errors)
[2025-06-04 08:28:01] 2025-06-04 12:27:48,225 | INFO     | overall cleanup function is called
[2025-06-04 08:28:01] 2025-06-04 12:27:49,233 | INFO     | --- collectZombieJob: --- 10, [31301]
[2025-06-04 08:28:01] 2025-06-04 12:27:49,234 | INFO     | zombie collector waiting for pid 31301
[2025-06-04 08:28:01] 2025-06-04 12:27:49,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:28:01] 2025-06-04 12:27:49,234 | INFO     | collected zombie processes
[2025-06-04 08:28:01] 2025-06-04 12:27:49,234 | INFO     | will attempt to kill all subprocesses of pid=31301
[2025-06-04 08:28:01] 2025-06-04 12:27:49,373 | INFO     | process IDs to be killed: [31301] (in reverse order)
[2025-06-04 08:28:01] 2025-06-04 12:27:49,440 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:28:01] 2025-06-04 12:27:49,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:28:01] 2025-06-04 12:27:49,443 | INFO     | did not find any defunct processes belonging to 31301
[2025-06-04 08:28:01] 2025-06-04 12:27:49,445 | INFO     | did not find any defunct processes belonging to 31301
[2025-06-04 08:28:01] 2025-06-04 12:27:49,446 | INFO     | ready for new job
[2025-06-04 08:28:01] 2025-06-04 12:27:49,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:28:01] 2025-06-04 12:27:49,447 | INFO     | **************************************
[2025-06-04 08:28:01] 2025-06-04 12:27:49,447 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:28:01] 2025-06-04 12:27:49,447 | INFO     | **************************************
[2025-06-04 08:28:01] 2025-06-04 12:27:49,447 | INFO     | 
[2025-06-04 08:28:01] 2025-06-04 12:27:49,448 | INFO     | architecture information:
[2025-06-04 08:28:01] 2025-06-04 12:27:49,448 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:28:01] 2025-06-04 12:27:49,462 | INFO     | cat /etc/os-release:
[2025-06-04 08:28:01] NAME="CentOS Linux"
[2025-06-04 08:28:01] VERSION="7 (Core)"
[2025-06-04 08:28:01] ID="centos"
[2025-06-04 08:28:01] ID_LIKE="rhel fedora"
[2025-06-04 08:28:01] VERSION_ID="7"
[2025-06-04 08:28:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:28:01] ANSI_COLOR="0;31"
[2025-06-04 08:28:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:28:01] HOME_URL="https://www.centos.org/"
[2025-06-04 08:28:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:28:01] 
[2025-06-04 08:28:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:28:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:28:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:28:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:28:01] 
[2025-06-04 08:28:01] 2025-06-04 12:27:49,462 | INFO     | **************************************
[2025-06-04 08:28:01] 2025-06-04 12:27:49,965 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:28:01] 2025-06-04 12:27:49,982 | INFO     | sufficient remaining disk space (56786681856 B)
[2025-06-04 08:28:01] 2025-06-04 12:27:49,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:28:01] 2025-06-04 12:27:49,982 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:28:01] 2025-06-04 12:27:49,982 | INFO     | update_server=False
[2025-06-04 08:28:01] 2025-06-04 12:27:49,983 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:28:01] 2025-06-04 12:27:49,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:28:01] 2025-06-04 12:27:49,983 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:28:01] 2025-06-04 12:27:49,983 | INFO     | aborting loop
[2025-06-04 08:28:01] 2025-06-04 12:27:50,030 | INFO     | all payload control threads have been joined
[2025-06-04 08:28:01] 2025-06-04 12:27:50,268 | INFO     | all data control threads have been joined
[2025-06-04 08:28:01] 2025-06-04 12:27:50,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:28:01] 2025-06-04 12:27:50,539 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:28:01] 2025-06-04 12:27:50,539 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:28:01] 2025-06-04 12:27:50,539 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:28:01] 2025-06-04 12:27:50,988 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:50,989 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:50,989 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:51,036 | INFO     | [payload] control thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:51,175 | INFO     | all job control threads have been joined
[2025-06-04 08:28:01] 2025-06-04 12:27:51,204 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:51,218 | INFO     | [job] validate thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:51,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:28:01] 2025-06-04 12:27:51,273 | INFO     | [data] control thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:51,444 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:51,586 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:51,598 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:51,615 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:52,180 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:52,180 | INFO     | [job] control thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:52,338 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:53,242 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:54,436 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:28:01] 2025-06-04 12:27:56,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436209395520)>', '<ExcThread(monitor, started 140435481679616)>']
[2025-06-04 08:28:01] 2025-06-04 12:27:56,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:28:01] 2025-06-04 12:27:56,570 | INFO     | [monitor] control thread has ended
[2025-06-04 08:28:01] 2025-06-04 12:28:01,392 | INFO     | all workflow threads have been joined
[2025-06-04 08:28:01] 2025-06-04 12:28:01,393 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:28:01] 2025-06-04 12:28:01,393 | INFO     | traces error code: 0
[2025-06-04 08:28:01] 2025-06-04 12:28:01,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:28:01] 2025-06-04 12:28:01,489 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:28:01] 2025-06-04 12:28:01,492 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:28:01] 2025-06-04 12:28:01,495 [wrapper] pilotpid: 23870
[2025-06-04 08:28:01] 2025-06-04 12:28:01,497 [wrapper] Pilot exit status: 0
[2025-06-04 08:28:01] 2025-06-04 12:28:01,506 [wrapper] pandaids: 6678364296
[2025-06-04 08:28:01] 2025-06-04 12:28:01,542 [wrapper] cleanup supervisor_pilot 34337 23871
[2025-06-04 08:28:01] 2025-06-04 12:28:01,545 [wrapper] Test setup, not cleaning
[2025-06-04 08:28:01] 2025-06-04 12:28:01,547 [wrapper] apfmon messages muted
[2025-06-04 08:28:01] 2025-06-04 12:28:01,550 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:28:01] 2025-06-04 12:28:01,552 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:28:01]  *** Error codes and diagnostics ***
[2025-06-04 08:28:01]     "exeErrorCode": 0,
[2025-06-04 08:28:01]     "exeErrorDiag": "",
[2025-06-04 08:28:01]     "pilotErrorCode": 0,
[2025-06-04 08:28:01]     "pilotErrorDiag": "",
[2025-06-04 08:28:01]  *** Listing of results directory ***
[2025-06-04 08:28:01] total 392284
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:28:01] -rwx------ 1 boincer umatlas     37140 Jun  4 02:10 runpilot2-wrapper.sh
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:10 queuedata.json
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:28:01] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:07 run_atlas
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:07 job.xml
[2025-06-04 08:28:01] -rw-r--r-- 2 boincer umatlas 217855509 Jun  4 07:07 EVNT.45006593._002153.pool.root.1
[2025-06-04 08:28:01] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:07 start_atlas.sh
[2025-06-04 08:28:01] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:07 shared
[2025-06-04 08:28:01] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 07:07 input.tar.gz
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:07 boinc_lockfile
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 07:07 pandaJob.out
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas    986812 Jun  4 07:07 agis_schedconf.cvmfs.json
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas   1603667 Jun  4 07:07 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:28:01] drwx------ 4 boincer umatlas      4096 Jun  4 07:07 pilot3
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas      6227 Jun  4 08:19 init_data.xml
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas 178384333 Jun  4 08:27 HITS.45006595._053796.pool.root.1
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas       530 Jun  4 08:27 boinc_task_state.xml
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas      1048 Jun  4 08:27 memory_monitor_summary.json
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas    336777 Jun  4 08:27 log.45006595._053796.job.log.tgz.1
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas      7736 Jun  4 08:27 heartbeat.json
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas        95 Jun  4 08:27 pilot_heartbeat.json
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:27 boinc_mmap_file
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:27 wrapper_checkpoint.txt
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas      4353 Jun  4 08:28 pilotlog.txt
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas    473166 Jun  4 08:28 log.45006595._053796.job.log.1
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas       357 Jun  4 08:28 output.list
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:28 runtime_log
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas    829440 Jun  4 08:28 result.tar.gz
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas       658 Jun  4 08:28 xYsLDmtVwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmARnKDmno9O7n.diag
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 08:28 runtime_log.err
[2025-06-04 08:28:01] -rw-r--r-- 1 boincer umatlas     21026 Jun  4 08:28 stderr.txt
[2025-06-04 08:28:01] HITS file was successfully produced:
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas 178384333 Jun  4 08:27 shared/HITS.pool.root.1
[2025-06-04 08:28:01]  *** Contents of shared directory: ***
[2025-06-04 08:28:01] total 388292
[2025-06-04 08:28:01] -rw-r--r-- 2 boincer umatlas 217855509 Jun  4 07:07 ATLAS.root_0
[2025-06-04 08:28:01] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:07 start_atlas.sh
[2025-06-04 08:28:01] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 07:07 input.tar.gz
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas 178384333 Jun  4 08:27 HITS.pool.root.1
[2025-06-04 08:28:01] -rw------- 1 boincer umatlas    829440 Jun  4 08:28 result.tar.gz
08:28:03 (20224): run_atlas exited; CPU time 41222.458738
08:28:03 (20224): called boinc_finish(0)

</stderr_txt>
]]>

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