Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:08:38 (2114818): wrapper (7.7.26015): starting
07:08:38 (2114818): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:08:38] Arguments: --nthreads 8
[2025-06-04 07:08:38] Threads: 8
[2025-06-04 07:08:38] Checking for CVMFS
[2025-06-04 07:08:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:08:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:08:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:08:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:08:38] 2.12.6.0 861369 32720 494404 146778 3 26 35742587 40960000 13888 16776704 0 154082193 99.658 143576353 26111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:08:38] CVMFS is ok
[2025-06-04 07:08:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:08:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:08:38] Further information can be found at the LHC@home message board.
[2025-06-04 07:08:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:08:38] Checking for apptainer binary...
[2025-06-04 07:08:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:08:38] Running /usr/bin/apptainer --version
[2025-06-04 07:08:38] apptainer version 1.4.1-1.el9
[2025-06-04 07:08:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:08:38] c7-13-33.aglt2.org
[2025-06-04 07:08:38] apptainer works
[2025-06-04 07:08:38] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:08:38] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:08:38] Starting ATLAS job with PandaID=6678364385
[2025-06-04 07:08:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:10:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:10:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:10:18]  is_altstaged=None
[2025-06-04 08:10:18]  is_tar=False
[2025-06-04 08:10:18]  lfn=log.45006595._053885.job.log.tgz.1
[2025-06-04 08:10:18]  mtime=0
[2025-06-04 08:10:18]  protocol_id=None
[2025-06-04 08:10:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:10:18]  replicas=None
[2025-06-04 08:10:18]  scope=mc23_13p6TeV
[2025-06-04 08:10:18]  status=None
[2025-06-04 08:10:18]  status_code=0
[2025-06-04 08:10:18]  storage_token=
[2025-06-04 08:10:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678364385/log.45006595._053885.job.log.tgz.1
[2025-06-04 08:10:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/75/log.45006595._053885.job.log.tgz.1
[2025-06-04 08:10:18]  workdir=None
[2025-06-04 08:10:18] ]
[2025-06-04 08:10:18] 2025-06-04 12:09:59,888 | INFO     | transferring file log.45006595._053885.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678364385/log.45006595._053885.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:10:18] 2025-06-04 12:09:59,888 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678364385/log.45006595._053885.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._053885.job
[2025-06-04 08:10:18] 2025-06-04 12:09:59,910 | INFO     | adding to output.list: log.45006595._053885.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/75/log.45006595._053885.job.log.tg
[2025-06-04 08:10:18] 2025-06-04 12:09:59,911 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:10:18] 2025-06-04 12:09:59,911 | INFO     | summary of transferred files:
[2025-06-04 08:10:18] 2025-06-04 12:09:59,911 | INFO     |  -- lfn=log.45006595._053885.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:10:18] 2025-06-04 12:09:59,912 | INFO     | stage-out finished correctly
[2025-06-04 08:10:18] 2025-06-04 12:10:01,329 | INFO     | monitor loop #273: job 0:6678364385 is in state 'finished'
[2025-06-04 08:10:18] 2025-06-04 12:10:01,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:10:18] 2025-06-04 12:10:01,580 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:10:18] 2025-06-04 12:10:01,635 | INFO     | job 6678364385 has state=finished
[2025-06-04 08:10:18] 2025-06-04 12:10:01,635 | INFO     | preparing for final server update for job 6678364385 in state='finished'
[2025-06-04 08:10:18] 2025-06-04 12:10:01,636 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:10:18] 2025-06-04 12:10:01,636 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:10:18] 2025-06-04 12:10:01,636 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:10:18] 2025-06-04 12:10:01,636 | INFO     | job 6678364385 has finished - writing final server update
[2025-06-04 08:10:18] 2025-06-04 12:10:01,637 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:10:18] 2025-06-04 12:10:01,655 | INFO     | executing command: lscpu
[2025-06-04 08:10:18] 2025-06-04 12:10:01,711 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:10:18] 2025-06-04 12:10:03,832 | INFO     | monitor loop #274: job 0:6678364385 is in state 'finished'
[2025-06-04 08:10:18] 2025-06-04 12:10:03,832 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:10:18] 2025-06-04 12:10:05,090 | INFO     | 3679s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 08:10:18] 2025-06-04 12:10:05,992 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:10:18] 2025-06-04 12:10:05,992 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678364385/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:10:18] 2025-06-04 12:10:05,993 | INFO     | extracted standard info from prmon json
[2025-06-04 08:10:18] 2025-06-04 12:10:05,993 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:10:18] 2025-06-04 12:10:05,993 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:10:18] 2025-06-04 12:10:05,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:10:18] 2025-06-04 12:10:05,993 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:10:18] 2025-06-04 12:10:05,995 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:10:18] 2025-06-04 12:10:05,995 | INFO     | sum of square deviations: 46147842.0
[2025-06-04 08:10:18] 2025-06-04 12:10:05,995 | INFO     | sum of deviations: 5579887038.0
[2025-06-04 08:10:18] 2025-06-04 12:10:05,995 | INFO     | mean x: 1749037245.0
[2025-06-04 08:10:18] 2025-06-04 12:10:05,995 | INFO     | mean y: 2204290.679245283
[2025-06-04 08:10:18] 2025-06-04 12:10:05,995 | INFO     | -- intersect: -211479629515.43304
[2025-06-04 08:10:18] 2025-06-04 12:10:05,995 | INFO     | intersect: -211479629515.43304
[2025-06-04 08:10:18] 2025-06-04 12:10:05,996 | INFO     | chi2: 0.6300149956733714
[2025-06-04 08:10:18] 2025-06-04 12:10:05,996 | INFO     | -- intersect: -211479629515.43304
[2025-06-04 08:10:18] 2025-06-04 12:10:05,996 | INFO     | current memory leak: 120.91 B/s (using 53 data points, chi2=0.63)
[2025-06-04 08:10:18] 2025-06-04 12:10:05,996 | INFO     | ..............................
[2025-06-04 08:10:18] 2025-06-04 12:10:05,996 | INFO     | . Timing measurements:
[2025-06-04 08:10:18] 2025-06-04 12:10:05,996 | INFO     | . get job = 0 s
[2025-06-04 08:10:18] 2025-06-04 12:10:05,996 | INFO     | . initial setup = 2 s
[2025-06-04 08:10:18] 2025-06-04 12:10:05,996 | INFO     | . payload setup = 5 s
[2025-06-04 08:10:18] 2025-06-04 12:10:05,997 | INFO     | . stage-in = 0 s
[2025-06-04 08:10:18] 2025-06-04 12:10:05,997 | INFO     | . payload execution = 3645 s
[2025-06-04 08:10:18] 2025-06-04 12:10:05,997 | INFO     | . stage-out = 0 s
[2025-06-04 08:10:18] 2025-06-04 12:10:05,997 | INFO     | . log creation = 0 s
[2025-06-04 08:10:18] 2025-06-04 12:10:05,997 | INFO     | ..............................
[2025-06-04 08:10:18] 2025-06-04 12:10:06,338 | INFO     | 
[2025-06-04 08:10:18] 2025-06-04 12:10:06,338 | INFO     | job summary report
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | --------------------------------------------------
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | PanDA job id: 6678364385
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | task id: 45006595
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | errors: (none)
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | pilot state: finished 
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | transexitcode: 0
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | exeerrorcode: 0
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | exeerrordiag: 
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | exitcode: 0
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | exitmsg: OK
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | cpuconsumptiontime: 24027 s
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | nevents: 400
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | neventsw: 0
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | pid: 2130981
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | pgrp: 2130981
[2025-06-04 08:10:18] 2025-06-04 12:10:06,339 | INFO     | corecount: 8
[2025-06-04 08:10:18] 2025-06-04 12:10:06,340 | INFO     | event service: False
[2025-06-04 08:10:18] 2025-06-04 12:10:06,340 | INFO     | sizes: {0: 2405182, 5: 2405388, 11: 2405444, 3654: 2431185, 3656: 2440126, 3658: 2440182, 3662: 2440480}
[2025-06-04 08:10:18] 2025-06-04 12:10:06,340 | INFO     | --------------------------------------------------
[2025-06-04 08:10:18] 2025-06-04 12:10:06,340 | INFO     | 
[2025-06-04 08:10:18] 2025-06-04 12:10:06,340 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:10:18] 2025-06-04 12:10:06,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,362 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,362 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,362 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,363 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:10:18] 2025-06-04 12:10:06,364 | INFO     | job 6678364385 has completed (purged errors)
[2025-06-04 08:10:18] 2025-06-04 12:10:06,364 | INFO     | overall cleanup function is called
[2025-06-04 08:10:18] 2025-06-04 12:10:07,372 | INFO     | --- collectZombieJob: --- 10, [2130981]
[2025-06-04 08:10:18] 2025-06-04 12:10:07,372 | INFO     | zombie collector waiting for pid 2130981
[2025-06-04 08:10:18] 2025-06-04 12:10:07,373 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:10:18] 2025-06-04 12:10:07,373 | INFO     | collected zombie processes
[2025-06-04 08:10:18] 2025-06-04 12:10:07,373 | INFO     | will attempt to kill all subprocesses of pid=2130981
[2025-06-04 08:10:18] 2025-06-04 12:10:07,677 | INFO     | process IDs to be killed: [2130981] (in reverse order)
[2025-06-04 08:10:18] 2025-06-04 12:10:07,791 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:10:18] 2025-06-04 12:10:07,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:10:18] 2025-06-04 12:10:07,806 | INFO     | did not find any defunct processes belonging to 2130981
[2025-06-04 08:10:18] 2025-06-04 12:10:07,820 | INFO     | did not find any defunct processes belonging to 2130981
[2025-06-04 08:10:18] 2025-06-04 12:10:07,821 | INFO     | ready for new job
[2025-06-04 08:10:18] 2025-06-04 12:10:07,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:10:18] 2025-06-04 12:10:07,822 | INFO     | **************************************
[2025-06-04 08:10:18] 2025-06-04 12:10:07,822 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:10:18] 2025-06-04 12:10:07,822 | INFO     | **************************************
[2025-06-04 08:10:18] 2025-06-04 12:10:07,822 | INFO     | 
[2025-06-04 08:10:18] 2025-06-04 12:10:07,839 | INFO     | architecture information:
[2025-06-04 08:10:18] 2025-06-04 12:10:07,839 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:10:18] 2025-06-04 12:10:07,857 | INFO     | cat /etc/os-release:
[2025-06-04 08:10:18] NAME="CentOS Linux"
[2025-06-04 08:10:18] VERSION="7 (Core)"
[2025-06-04 08:10:18] ID="centos"
[2025-06-04 08:10:18] ID_LIKE="rhel fedora"
[2025-06-04 08:10:18] VERSION_ID="7"
[2025-06-04 08:10:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:10:18] ANSI_COLOR="0;31"
[2025-06-04 08:10:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:10:18] HOME_URL="https://www.centos.org/"
[2025-06-04 08:10:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:10:18] 
[2025-06-04 08:10:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:10:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:10:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:10:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:10:18] 
[2025-06-04 08:10:18] 2025-06-04 12:10:07,857 | INFO     | **************************************
[2025-06-04 08:10:18] 2025-06-04 12:10:08,360 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:10:18] 2025-06-04 12:10:08,380 | INFO     | sufficient remaining disk space (86035660800 B)
[2025-06-04 08:10:18] 2025-06-04 12:10:08,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:10:18] 2025-06-04 12:10:08,380 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:10:18] 2025-06-04 12:10:08,380 | INFO     | update_server=False
[2025-06-04 08:10:18] 2025-06-04 12:10:08,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:10:18] 2025-06-04 12:10:08,380 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:10:18] 2025-06-04 12:10:08,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:10:18] 2025-06-04 12:10:08,381 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:10:18] 2025-06-04 12:10:08,382 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:10:18] 2025-06-04 12:10:08,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:10:18] 2025-06-04 12:10:08,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:10:18] 2025-06-04 12:10:08,549 | INFO     | all job control threads have been joined
[2025-06-04 08:10:18] 2025-06-04 12:10:08,750 | INFO     | all data control threads have been joined
[2025-06-04 08:10:18] 2025-06-04 12:10:08,837 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:10:18] 2025-06-04 12:10:08,837 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:10:18] 2025-06-04 12:10:08,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:10:18] 2025-06-04 12:10:08,838 | INFO     | will abort loop
[2025-06-04 08:10:18] 2025-06-04 12:10:08,889 | INFO     | all payload control threads have been joined
[2025-06-04 08:10:18] 2025-06-04 12:10:09,381 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:09,554 | INFO     | [job] control thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:09,638 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:09,755 | INFO     | [data] control thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:09,843 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:09,892 | INFO     | [payload] control thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:10,387 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:10,387 | INFO     | [job] validate thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:10,449 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:10,632 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:10,709 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:10,737 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:10,841 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:10,845 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:11,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:10:18] 2025-06-04 12:10:12,092 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:12,387 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:10:18] 2025-06-04 12:10:12,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140517945939776)>', '<ExcThread(monitor, started 140517094450944)>']
[2025-06-04 08:10:18] 2025-06-04 12:10:13,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:10:18] 2025-06-04 12:10:13,398 | INFO     | [monitor] control thread has ended
[2025-06-04 08:10:18] 2025-06-04 12:10:17,709 | INFO     | all workflow threads have been joined
[2025-06-04 08:10:18] 2025-06-04 12:10:17,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:10:18] 2025-06-04 12:10:17,709 | INFO     | traces error code: 0
[2025-06-04 08:10:18] 2025-06-04 12:10:17,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:10:18] 2025-06-04 12:10:17,832 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:10:18] 2025-06-04 12:10:17,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:10:18] 2025-06-04 12:10:17,839 [wrapper] pilotpid: 2119515
[2025-06-04 08:10:18] 2025-06-04 12:10:17,842 [wrapper] Pilot exit status: 0
[2025-06-04 08:10:18] 2025-06-04 12:10:17,856 [wrapper] pandaids: 6678364385
[2025-06-04 08:10:18] 2025-06-04 12:10:17,939 [wrapper] cleanup supervisor_pilot 2317538 2119517
[2025-06-04 08:10:18] 2025-06-04 12:10:17,942 [wrapper] Test setup, not cleaning
[2025-06-04 08:10:18] 2025-06-04 12:10:17,945 [wrapper] apfmon messages muted
[2025-06-04 08:10:18] 2025-06-04 12:10:17,948 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:10:18] 2025-06-04 12:10:17,952 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:10:18]  *** Error codes and diagnostics ***
[2025-06-04 08:10:18]     "exeErrorCode": 0,
[2025-06-04 08:10:18]     "exeErrorDiag": "",
[2025-06-04 08:10:18]     "pilotErrorCode": 0,
[2025-06-04 08:10:18]     "pilotErrorDiag": "",
[2025-06-04 08:10:18]  *** Listing of results directory ***
[2025-06-04 08:10:18] total 388752
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:23 queuedata.json
[2025-06-04 08:10:18] -rwx------. 1 boincer umatlas     37140 Jun  4 02:23 runpilot2-wrapper.sh
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:10:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:08 run_atlas
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:08 job.xml
[2025-06-04 08:10:18] -rw-r--r--. 2 boincer umatlas 213800995 Jun  4 07:08 EVNT.45006593._002157.pool.root.1
[2025-06-04 08:10:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:08 start_atlas.sh
[2025-06-04 08:10:18] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:08 shared
[2025-06-04 08:10:18] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 07:08 input.tar.gz
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:08 boinc_lockfile
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 07:08 pandaJob.out
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas    986812 Jun  4 07:08 agis_schedconf.cvmfs.json
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas   1603667 Jun  4 07:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:10:18] drwx------. 4 boincer umatlas      4096 Jun  4 07:08 pilot3
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas      6896 Jun  4 08:03 init_data.xml
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas 179132597 Jun  4 08:09 HITS.45006595._053885.pool.root.1
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:09 boinc_task_state.xml
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas      1023 Jun  4 08:09 memory_monitor_summary.json
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas    281129 Jun  4 08:09 log.45006595._053885.job.log.tgz.1
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas        95 Jun  4 08:10 pilot_heartbeat.json
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas      7675 Jun  4 08:10 heartbeat.json
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:10 wrapper_checkpoint.txt
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:10 boinc_mmap_file
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas      4662 Jun  4 08:10 pilotlog.txt
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas    373509 Jun  4 08:10 log.45006595._053885.job.log.1
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas       357 Jun  4 08:10 output.list
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:10 runtime_log
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas    675840 Jun  4 08:10 result.tar.gz
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 08:10 runtime_log.err
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas       652 Jun  4 08:10 mnJKDmxhwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkSnKDmDhc4Uo.diag
[2025-06-04 08:10:18] -rw-r--r--. 1 boincer umatlas     21379 Jun  4 08:10 stderr.txt
[2025-06-04 08:10:18] HITS file was successfully produced:
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas 179132597 Jun  4 08:09 shared/HITS.pool.root.1
[2025-06-04 08:10:18]  *** Contents of shared directory: ***
[2025-06-04 08:10:18] total 384912
[2025-06-04 08:10:18] -rw-r--r--. 2 boincer umatlas 213800995 Jun  4 07:08 ATLAS.root_0
[2025-06-04 08:10:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:08 start_atlas.sh
[2025-06-04 08:10:18] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 07:08 input.tar.gz
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas 179132597 Jun  4 08:09 HITS.pool.root.1
[2025-06-04 08:10:18] -rw-------. 1 boincer umatlas    675840 Jun  4 08:10 result.tar.gz
08:10:19 (2114818): run_atlas exited; CPU time 24046.930356
08:10:19 (2114818): called boinc_finish(0)

</stderr_txt>
]]>

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