Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:09:19 (74052): wrapper (7.7.26015): starting
07:09:19 (74052): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 07:09:19] Arguments: --nthreads 9
[2025-06-04 07:09:19] Threads: 9
[2025-06-04 07:09:19] Checking for CVMFS
[2025-06-04 07:09:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:09:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:09:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:09:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:09:19] 2.11.2.0 6636 28704 245772 146778 3 63 13108132 18432001 6777 130560 0 68267685 99.499 66404395 29061 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 07:09:19] CVMFS is ok
[2025-06-04 07:09:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:09:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:09:19] Further information can be found at the LHC@home message board.
[2025-06-04 07:09:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:09:19] Checking for apptainer binary...
[2025-06-04 07:09:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:09:19] Running /usr/bin/apptainer --version
[2025-06-04 07:09:19] apptainer version 1.3.2-1.el7
[2025-06-04 07:09:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:09:20] c-210-37-3.aglt2.org
[2025-06-04 07:09:20] apptainer works
[2025-06-04 07:09:20] Set ATHENA_PROC_NUMBER=9
[2025-06-04 07:09:20] Set ATHENA_CORE_NUMBER=9
[2025-06-04 07:09:20] Starting ATLAS job with PandaID=6678364303
[2025-06-04 07:09:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:26:35]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:26:35]  lfn=log.45006595._053803.job.log.tgz.1
[2025-06-04 08:26:35]  mtime=0
[2025-06-04 08:26:35]  protocol_id=None
[2025-06-04 08:26:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:26:35]  replicas=None
[2025-06-04 08:26:35]  scope=mc23_13p6TeV
[2025-06-04 08:26:35]  status=None
[2025-06-04 08:26:35]  status_code=0
[2025-06-04 08:26:35]  storage_token=
[2025-06-04 08:26:35]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678364303/log.45006595._053803.job.log.tgz.1
[2025-06-04 08:26:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/6c/log.45006595._053803.job.log.tgz.1
[2025-06-04 08:26:35]  workdir=None
[2025-06-04 08:26:35] ]
[2025-06-04 08:26:35] 2025-06-04 12:26:06,075 | INFO     | monitor loop #346: job 0:6678364303 is in state 'stageout'
[2025-06-04 08:26:35] 2025-06-04 12:26:06,081 | INFO     | transferring file log.45006595._053803.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678364303/log.45006595._053803.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:26:35] 2025-06-04 12:26:06,081 | WARNING  | aborting job monitor tasks since payload process 84074 is not running
[2025-06-04 08:26:35] 2025-06-04 12:26:06,082 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678364303/log.45006595._053803.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._053803.job
[2025-06-04 08:26:35] 2025-06-04 12:26:06,109 | INFO     | adding to output.list: log.45006595._053803.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/6c/log.45006595._053803.job.log.tg
[2025-06-04 08:26:35] 2025-06-04 12:26:06,110 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:26:35] 2025-06-04 12:26:06,111 | INFO     | summary of transferred files:
[2025-06-04 08:26:35] 2025-06-04 12:26:06,111 | INFO     |  -- lfn=log.45006595._053803.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:26:35] 2025-06-04 12:26:06,111 | INFO     | stage-out finished correctly
[2025-06-04 08:26:35] 2025-06-04 12:26:08,584 | INFO     | monitor loop #347: job 0:6678364303 is in state 'finished'
[2025-06-04 08:26:35] 2025-06-04 12:26:08,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:26:35] 2025-06-04 12:26:08,681 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:26:35] 2025-06-04 12:26:10,447 | INFO     | job 6678364303 has state=finished
[2025-06-04 08:26:35] 2025-06-04 12:26:10,447 | INFO     | preparing for final server update for job 6678364303 in state='finished'
[2025-06-04 08:26:35] 2025-06-04 12:26:10,506 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 08:26:35] 2025-06-04 12:26:10,506 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:26:35] 2025-06-04 12:26:10,506 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:26:35] 2025-06-04 12:26:10,506 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:26:35] 2025-06-04 12:26:10,506 | INFO     | job 6678364303 has finished - writing final server update
[2025-06-04 08:26:35] 2025-06-04 12:26:10,507 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:26:35] 2025-06-04 12:26:10,510 | INFO     | executing command: lscpu
[2025-06-04 08:26:35] 2025-06-04 12:26:10,570 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:26:35] 2025-06-04 12:26:11,087 | INFO     | monitor loop #348: job 0:6678364303 is in state 'finished'
[2025-06-04 08:26:35] 2025-06-04 12:26:11,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:26:35] 2025-06-04 12:26:13,591 | INFO     | monitor loop #349: job 0:6678364303 is in state 'finished'
[2025-06-04 08:26:35] 2025-06-04 12:26:13,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:26:35] 2025-06-04 12:26:14,843 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:26:35] 2025-06-04 12:26:14,844 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678364303/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:26:35] 2025-06-04 12:26:14,846 | INFO     | extracted standard info from prmon json
[2025-06-04 08:26:35] 2025-06-04 12:26:14,846 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:26:35] 2025-06-04 12:26:14,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:26:35] 2025-06-04 12:26:14,847 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:26:35] 2025-06-04 12:26:14,847 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:26:35] 2025-06-04 12:26:14,850 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:26:35] 2025-06-04 12:26:14,851 | INFO     | sum of square deviations: 97479037.0
[2025-06-04 08:26:35] 2025-06-04 12:26:14,852 | INFO     | sum of deviations: 343367566.50000006
[2025-06-04 08:26:35] 2025-06-04 12:26:14,852 | INFO     | mean x: 1749037749.5
[2025-06-04 08:26:35] 2025-06-04 12:26:14,852 | INFO     | mean y: 2525303.3970588236
[2025-06-04 08:26:35] 2025-06-04 12:26:14,853 | INFO     | -- intersect: -6158418159.374857
[2025-06-04 08:26:35] 2025-06-04 12:26:14,853 | INFO     | intersect: -6158418159.374857
[2025-06-04 08:26:35] 2025-06-04 12:26:14,853 | INFO     | chi2: 0.019243777085230545
[2025-06-04 08:26:35] 2025-06-04 12:26:14,853 | INFO     | -- intersect: -6158418159.374857
[2025-06-04 08:26:35] 2025-06-04 12:26:14,854 | INFO     | current memory leak: 3.52 B/s (using 68 data points, chi2=0.02)
[2025-06-04 08:26:35] 2025-06-04 12:26:14,854 | INFO     | ..............................
[2025-06-04 08:26:35] 2025-06-04 12:26:14,855 | INFO     | . Timing measurements:
[2025-06-04 08:26:35] 2025-06-04 12:26:14,855 | INFO     | . get job = 0 s
[2025-06-04 08:26:35] 2025-06-04 12:26:14,855 | INFO     | . initial setup = 2 s
[2025-06-04 08:26:35] 2025-06-04 12:26:14,855 | INFO     | . payload setup = 7 s
[2025-06-04 08:26:35] 2025-06-04 12:26:14,855 | INFO     | . stage-in = 0 s
[2025-06-04 08:26:35] 2025-06-04 12:26:14,855 | INFO     | . payload execution = 4565 s
[2025-06-04 08:26:35] 2025-06-04 12:26:14,855 | INFO     | . stage-out = 0 s
[2025-06-04 08:26:35] 2025-06-04 12:26:14,855 | INFO     | . log creation = 0 s
[2025-06-04 08:26:35] 2025-06-04 12:26:14,855 | INFO     | ..............................
[2025-06-04 08:26:35] 2025-06-04 12:26:14,906 | INFO     | 
[2025-06-04 08:26:35] 2025-06-04 12:26:14,906 | INFO     | job summary report
[2025-06-04 08:26:35] 2025-06-04 12:26:14,906 | INFO     | --------------------------------------------------
[2025-06-04 08:26:35] 2025-06-04 12:26:14,906 | INFO     | PanDA job id: 6678364303
[2025-06-04 08:26:35] 2025-06-04 12:26:14,906 | INFO     | task id: 45006595
[2025-06-04 08:26:35] 2025-06-04 12:26:14,907 | INFO     | errors: (none)
[2025-06-04 08:26:35] 2025-06-04 12:26:14,907 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:26:35] 2025-06-04 12:26:14,907 | INFO     | pilot state: finished 
[2025-06-04 08:26:35] 2025-06-04 12:26:14,907 | INFO     | transexitcode: 0
[2025-06-04 08:26:35] 2025-06-04 12:26:14,907 | INFO     | exeerrorcode: 0
[2025-06-04 08:26:35] 2025-06-04 12:26:14,907 | INFO     | exeerrordiag: 
[2025-06-04 08:26:35] 2025-06-04 12:26:14,907 | INFO     | exitcode: 0
[2025-06-04 08:26:35] 2025-06-04 12:26:14,907 | INFO     | exitmsg: OK
[2025-06-04 08:26:35] 2025-06-04 12:26:14,907 | INFO     | cpuconsumptiontime: 33877 s
[2025-06-04 08:26:35] 2025-06-04 12:26:14,907 | INFO     | nevents: 400
[2025-06-04 08:26:35] 2025-06-04 12:26:14,908 | INFO     | neventsw: 0
[2025-06-04 08:26:35] 2025-06-04 12:26:14,908 | INFO     | pid: 84074
[2025-06-04 08:26:35] 2025-06-04 12:26:14,908 | INFO     | pgrp: 84074
[2025-06-04 08:26:35] 2025-06-04 12:26:14,908 | INFO     | corecount: 9
[2025-06-04 08:26:35] 2025-06-04 12:26:14,908 | INFO     | event service: False
[2025-06-04 08:26:35] 2025-06-04 12:26:14,908 | INFO     | sizes: {0: 2405184, 1: 2405212, 5: 2405418, 11: 2405474, 4577: 2431499, 4578: 2440440, 4581: 2440624, 4587: 2440794}
[2025-06-04 08:26:35] 2025-06-04 12:26:14,908 | INFO     | --------------------------------------------------
[2025-06-04 08:26:35] 2025-06-04 12:26:14,908 | INFO     | 
[2025-06-04 08:26:35] 2025-06-04 12:26:14,908 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 08:26:35] 2025-06-04 12:26:14,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:26:35] 2025-06-04 12:26:14,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:26:35] 2025-06-04 12:26:14,938 | INFO     | job 6678364303 has completed (purged errors)
[2025-06-04 08:26:35] 2025-06-04 12:26:14,938 | INFO     | overall cleanup function is called
[2025-06-04 08:26:35] 2025-06-04 12:26:15,947 | INFO     | --- collectZombieJob: --- 10, [84074]
[2025-06-04 08:26:35] 2025-06-04 12:26:15,947 | INFO     | zombie collector waiting for pid 84074
[2025-06-04 08:26:35] 2025-06-04 12:26:15,947 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:26:35] 2025-06-04 12:26:15,947 | INFO     | collected zombie processes
[2025-06-04 08:26:35] 2025-06-04 12:26:15,948 | INFO     | will attempt to kill all subprocesses of pid=84074
[2025-06-04 08:26:35] 2025-06-04 12:26:16,110 | INFO     | process IDs to be killed: [84074] (in reverse order)
[2025-06-04 08:26:35] 2025-06-04 12:26:16,187 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:26:35] 2025-06-04 12:26:16,188 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:26:35] 2025-06-04 12:26:16,198 | INFO     | did not find any defunct processes belonging to 84074
[2025-06-04 08:26:35] 2025-06-04 12:26:16,202 | INFO     | did not find any defunct processes belonging to 84074
[2025-06-04 08:26:35] 2025-06-04 12:26:16,203 | INFO     | ready for new job
[2025-06-04 08:26:35] 2025-06-04 12:26:16,203 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:26:35] 2025-06-04 12:26:16,204 | INFO     | **************************************
[2025-06-04 08:26:35] 2025-06-04 12:26:16,204 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:26:35] 2025-06-04 12:26:16,204 | INFO     | **************************************
[2025-06-04 08:26:35] 2025-06-04 12:26:16,204 | INFO     | 
[2025-06-04 08:26:35] 2025-06-04 12:26:16,207 | INFO     | architecture information:
[2025-06-04 08:26:35] 2025-06-04 12:26:16,207 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:26:35] 2025-06-04 12:26:16,226 | INFO     | cat /etc/os-release:
[2025-06-04 08:26:35] NAME="CentOS Linux"
[2025-06-04 08:26:35] VERSION="7 (Core)"
[2025-06-04 08:26:35] ID="centos"
[2025-06-04 08:26:35] ID_LIKE="rhel fedora"
[2025-06-04 08:26:35] VERSION_ID="7"
[2025-06-04 08:26:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:26:35] ANSI_COLOR="0;31"
[2025-06-04 08:26:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:26:35] HOME_URL="https://www.centos.org/"
[2025-06-04 08:26:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:26:35] 
[2025-06-04 08:26:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:26:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:26:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:26:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:26:35] 
[2025-06-04 08:26:35] 2025-06-04 12:26:16,227 | INFO     | **************************************
[2025-06-04 08:26:35] 2025-06-04 12:26:16,730 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 08:26:35] 2025-06-04 12:26:16,754 | INFO     | sufficient remaining disk space (56435408896 B)
[2025-06-04 08:26:35] 2025-06-04 12:26:16,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:26:35] 2025-06-04 12:26:16,755 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:26:35] 2025-06-04 12:26:16,755 | INFO     | update_server=False
[2025-06-04 08:26:35] 2025-06-04 12:26:16,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:26:35] 2025-06-04 12:26:16,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:26:35] 2025-06-04 12:26:16,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:26:35] 2025-06-04 12:26:16,756 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:26:35] 2025-06-04 12:26:16,757 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:26:35] 2025-06-04 12:26:16,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:26:35] 2025-06-04 12:26:16,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:26:35] 2025-06-04 12:26:16,914 | INFO     | all job control threads have been joined
[2025-06-04 08:26:35] 2025-06-04 12:26:17,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:26:35] 2025-06-04 12:26:17,100 | INFO     | aborting loop
[2025-06-04 08:26:35] 2025-06-04 12:26:17,222 | INFO     | all data control threads have been joined
[2025-06-04 08:26:35] 2025-06-04 12:26:17,760 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:17,762 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:17,920 | INFO     | [job] control thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:17,957 | INFO     | [job] validate thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:18,106 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:18,117 | INFO     | all payload control threads have been joined
[2025-06-04 08:26:35] 2025-06-04 12:26:18,227 | INFO     | [data] control thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:18,262 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:18,380 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:18,387 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:18,602 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:18,762 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:18,982 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:19,122 | INFO     | [payload] control thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:19,123 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:19,244 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:26:35] 2025-06-04 12:26:23,249 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:27,414 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:26:35] 2025-06-04 12:26:28,418 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:26:35] 2025-06-04 12:26:29,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265803732800)>', '<ExcThread(monitor, started 140265218098944)>']
[2025-06-04 08:26:35] 2025-06-04 12:26:29,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:26:35] 2025-06-04 12:26:29,809 | INFO     | [monitor] control thread has ended
[2025-06-04 08:26:35] 2025-06-04 12:26:34,685 | INFO     | all workflow threads have been joined
[2025-06-04 08:26:35] 2025-06-04 12:26:34,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:26:35] 2025-06-04 12:26:34,686 | INFO     | traces error code: 0
[2025-06-04 08:26:35] 2025-06-04 12:26:34,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:26:35] 2025-06-04 12:26:34,784 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:26:35] 2025-06-04 12:26:34,787 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:26:35] 2025-06-04 12:26:34,790 [wrapper] pilotpid: 77629
[2025-06-04 08:26:35] 2025-06-04 12:26:34,794 [wrapper] Pilot exit status: 0
[2025-06-04 08:26:35] 2025-06-04 12:26:34,807 [wrapper] pandaids: 6678364303
[2025-06-04 08:26:35] 2025-06-04 12:26:34,860 [wrapper] cleanup supervisor_pilot 196946 77630
[2025-06-04 08:26:35] 2025-06-04 12:26:34,865 [wrapper] Test setup, not cleaning
[2025-06-04 08:26:35] 2025-06-04 12:26:34,869 [wrapper] apfmon messages muted
[2025-06-04 08:26:35] 2025-06-04 12:26:34,873 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:26:35] 2025-06-04 12:26:34,876 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:26:35]  *** Error codes and diagnostics ***
[2025-06-04 08:26:35]     "exeErrorCode": 0,
[2025-06-04 08:26:35]     "exeErrorDiag": "",
[2025-06-04 08:26:35]     "pilotErrorCode": 0,
[2025-06-04 08:26:35]     "pilotErrorDiag": "",
[2025-06-04 08:26:35]  *** Listing of results directory ***
[2025-06-04 08:26:35] total 394580
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:10 queuedata.json
[2025-06-04 08:26:35] -rwx------ 1 boincer umatlas     37140 Jun  4 02:11 runpilot2-wrapper.sh
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:26:35] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:09 run_atlas
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:09 job.xml
[2025-06-04 08:26:35] -rw-r--r-- 2 boincer umatlas 217855509 Jun  4 07:09 EVNT.45006593._002153.pool.root.1
[2025-06-04 08:26:35] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:09 start_atlas.sh
[2025-06-04 08:26:35] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:09 shared
[2025-06-04 08:26:35] -rw-r--r-- 2 boincer umatlas    508885 Jun  4 07:09 input.tar.gz
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:09 boinc_lockfile
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 07:09 pandaJob.out
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas    986812 Jun  4 07:09 agis_schedconf.cvmfs.json
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas   1603667 Jun  4 07:09 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:26:35] drwx------ 4 boincer umatlas      4096 Jun  4 07:09 pilot3
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas      6354 Jun  4 08:19 init_data.xml
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas        95 Jun  4 08:25 pilot_heartbeat.json
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas 180794670 Jun  4 08:25 HITS.45006595._053803.pool.root.1
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas       529 Jun  4 08:25 boinc_task_state.xml
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas      1051 Jun  4 08:26 memory_monitor_summary.json
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas    326969 Jun  4 08:26 log.45006595._053803.job.log.tgz.1
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas      7741 Jun  4 08:26 heartbeat.json
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:26 boinc_mmap_file
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas      4548 Jun  4 08:26 pilotlog.txt
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:26 wrapper_checkpoint.txt
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas    456560 Jun  4 08:26 log.45006595._053803.job.log.1
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas       357 Jun  4 08:26 output.list
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:26 runtime_log
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas    798720 Jun  4 08:26 result.tar.gz
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 08:26 runtime_log.err
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas       660 Jun  4 08:26 9d1LDmsWwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHRnKDmnzEJVo.diag
[2025-06-04 08:26:35] -rw-r--r-- 1 boincer umatlas     21564 Jun  4 08:26 stderr.txt
[2025-06-04 08:26:35] HITS file was successfully produced:
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas 180794670 Jun  4 08:25 shared/HITS.pool.root.1
[2025-06-04 08:26:35]  *** Contents of shared directory: ***
[2025-06-04 08:26:35] total 390616
[2025-06-04 08:26:35] -rw-r--r-- 2 boincer umatlas 217855509 Jun  4 07:09 ATLAS.root_0
[2025-06-04 08:26:35] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:09 start_atlas.sh
[2025-06-04 08:26:35] -rw-r--r-- 2 boincer umatlas    508885 Jun  4 07:09 input.tar.gz
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas 180794670 Jun  4 08:25 HITS.pool.root.1
[2025-06-04 08:26:35] -rw------- 1 boincer umatlas    798720 Jun  4 08:26 result.tar.gz
08:26:36 (74052): run_atlas exited; CPU time 33938.015469
08:26:36 (74052): called boinc_finish(0)

</stderr_txt>
]]>

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