Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:00:57 (1759618): wrapper (7.7.26015): starting
07:00:57 (1759618): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:00:57] Arguments: --nthreads 8
[2025-06-04 07:00:57] Threads: 8
[2025-06-04 07:00:57] Checking for CVMFS
[2025-06-04 07:00:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:00:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:00:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:00:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:00:57] 2.12.6.0 4471 37226 521008 146777 0 197 20071974 32935936 15033 16776704 0 155457088 99.570 183033933 27636 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:00:57] CVMFS is ok
[2025-06-04 07:00:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:00:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:00:57] Further information can be found at the LHC@home message board.
[2025-06-04 07:00:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:00:57] Checking for apptainer binary...
[2025-06-04 07:00:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:00:57] Running /usr/bin/apptainer --version
[2025-06-04 07:00:57] apptainer version 1.4.1-1.el9
[2025-06-04 07:00:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:00:58] c7-11-13.aglt2.org
[2025-06-04 07:00:58] apptainer works
[2025-06-04 07:00:58] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:00:58] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:00:58] Starting ATLAS job with PandaID=6679463715
[2025-06-04 07:00:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:09:20]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:09:20]  mtime=0
[2025-06-04 08:09:20]  protocol_id=None
[2025-06-04 08:09:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:09:20]  replicas=None
[2025-06-04 08:09:20]  scope=mc23_13p6TeV
[2025-06-04 08:09:20]  status=None
[2025-06-04 08:09:20]  status_code=0
[2025-06-04 08:09:20]  storage_token=
[2025-06-04 08:09:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679463715/log.45006595._056351.job.log.tgz.1
[2025-06-04 08:09:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/d9/log.45006595._056351.job.log.tgz.1
[2025-06-04 08:09:20]  workdir=None
[2025-06-04 08:09:20] ]
[2025-06-04 08:09:20] 2025-06-04 12:08:56,579 | INFO     | transferring file log.45006595._056351.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679463715/log.45006595._056351.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:09:20] 2025-06-04 12:08:56,579 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679463715/log.45006595._056351.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056351.job
[2025-06-04 08:09:20] 2025-06-04 12:08:56,603 | INFO     | adding to output.list: log.45006595._056351.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/d9/log.45006595._056351.job.log.tg
[2025-06-04 08:09:20] 2025-06-04 12:08:56,604 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:09:20] 2025-06-04 12:08:56,604 | INFO     | summary of transferred files:
[2025-06-04 08:09:20] 2025-06-04 12:08:56,604 | INFO     |  -- lfn=log.45006595._056351.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:09:20] 2025-06-04 12:08:56,604 | INFO     | stage-out finished correctly
[2025-06-04 08:09:20] 2025-06-04 12:08:58,002 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:09:20] 2025-06-04 12:08:58,077 | INFO     | job 6679463715 has state=finished
[2025-06-04 08:09:20] 2025-06-04 12:08:58,077 | INFO     | preparing for final server update for job 6679463715 in state='finished'
[2025-06-04 08:09:20] 2025-06-04 12:08:58,078 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:09:20] 2025-06-04 12:08:58,078 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:09:20] 2025-06-04 12:08:58,078 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:09:20] 2025-06-04 12:08:58,079 | INFO     | job 6679463715 has finished - writing final server update
[2025-06-04 08:09:20] 2025-06-04 12:08:58,079 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:09:20] 2025-06-04 12:08:58,096 | INFO     | executing command: lscpu
[2025-06-04 08:09:20] 2025-06-04 12:08:58,181 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:09:20] 2025-06-04 12:09:01,852 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:09:20] 2025-06-04 12:09:01,852 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679463715/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:09:20] 2025-06-04 12:09:01,853 | INFO     | extracted standard info from prmon json
[2025-06-04 08:09:20] 2025-06-04 12:09:01,853 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:09:20] 2025-06-04 12:09:01,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:09:20] 2025-06-04 12:09:01,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:09:20] 2025-06-04 12:09:01,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:09:20] 2025-06-04 12:09:01,855 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:09:20] 2025-06-04 12:09:01,855 | INFO     | sum of square deviations: 66959395.0
[2025-06-04 08:09:20] 2025-06-04 12:09:01,855 | INFO     | sum of deviations: 8576115751.499999
[2025-06-04 08:09:20] 2025-06-04 12:09:01,855 | INFO     | mean x: 1749036999.5
[2025-06-04 08:09:20] 2025-06-04 12:09:01,855 | INFO     | mean y: 2115737.8833333333
[2025-06-04 08:09:20] 2025-06-04 12:09:01,855 | INFO     | -- intersect: -224013405330.79187
[2025-06-04 08:09:20] 2025-06-04 12:09:01,855 | INFO     | intersect: -224013405330.79187
[2025-06-04 08:09:20] 2025-06-04 12:09:01,855 | INFO     | chi2: 0.8913668289101644
[2025-06-04 08:09:20] 2025-06-04 12:09:01,855 | INFO     | -- intersect: -224013405330.79187
[2025-06-04 08:09:20] 2025-06-04 12:09:01,856 | INFO     | current memory leak: 128.08 B/s (using 60 data points, chi2=0.89)
[2025-06-04 08:09:20] 2025-06-04 12:09:01,856 | INFO     | ..............................
[2025-06-04 08:09:20] 2025-06-04 12:09:01,856 | INFO     | . Timing measurements:
[2025-06-04 08:09:20] 2025-06-04 12:09:01,856 | INFO     | . get job = 0 s
[2025-06-04 08:09:20] 2025-06-04 12:09:01,856 | INFO     | . initial setup = 2 s
[2025-06-04 08:09:20] 2025-06-04 12:09:01,856 | INFO     | . payload setup = 6 s
[2025-06-04 08:09:20] 2025-06-04 12:09:01,856 | INFO     | . stage-in = 0 s
[2025-06-04 08:09:20] 2025-06-04 12:09:01,856 | INFO     | . payload execution = 4042 s
[2025-06-04 08:09:20] 2025-06-04 12:09:01,856 | INFO     | . stage-out = 0 s
[2025-06-04 08:09:20] 2025-06-04 12:09:01,856 | INFO     | . log creation = 0 s
[2025-06-04 08:09:20] 2025-06-04 12:09:01,856 | INFO     | ..............................
[2025-06-04 08:09:20] 2025-06-04 12:09:01,914 | INFO     | 
[2025-06-04 08:09:20] 2025-06-04 12:09:01,914 | INFO     | job summary report
[2025-06-04 08:09:20] 2025-06-04 12:09:01,914 | INFO     | --------------------------------------------------
[2025-06-04 08:09:20] 2025-06-04 12:09:01,914 | INFO     | PanDA job id: 6679463715
[2025-06-04 08:09:20] 2025-06-04 12:09:01,914 | INFO     | task id: 45006595
[2025-06-04 08:09:20] 2025-06-04 12:09:01,914 | INFO     | errors: (none)
[2025-06-04 08:09:20] 2025-06-04 12:09:01,914 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:09:20] 2025-06-04 12:09:01,914 | INFO     | pilot state: finished 
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | transexitcode: 0
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | exeerrorcode: 0
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | exeerrordiag: 
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | exitcode: 0
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | exitmsg: OK
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | cpuconsumptiontime: 26839 s
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | nevents: 400
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | neventsw: 0
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | pid: 1769617
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | pgrp: 1769617
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | corecount: 8
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | event service: False
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | sizes: {0: 2404963, 1: 2405162, 5: 2405368, 11: 2405424, 4052: 2431278, 4053: 2440219, 4054: 2440403, 4058: 2440573}
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | --------------------------------------------------
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | 
[2025-06-04 08:09:20] 2025-06-04 12:09:01,915 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:09:20] 2025-06-04 12:09:01,935 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:09:20] 2025-06-04 12:09:01,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:09:20] 2025-06-04 12:09:01,938 | INFO     | job 6679463715 has completed (purged errors)
[2025-06-04 08:09:20] 2025-06-04 12:09:01,938 | INFO     | overall cleanup function is called
[2025-06-04 08:09:20] 2025-06-04 12:09:02,303 | WARNING  | process 1769617 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:09:20] 2025-06-04 12:09:02,492 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:09:20] 2025-06-04 12:09:02,492 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:09:20] 2025-06-04 12:09:02,493 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6679463715/payload.stdout) since it has not been created yet
[2025-06-04 08:09:20] 2025-06-04 12:09:02,493 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:09:20] 2025-06-04 12:09:02,508 | INFO     | sufficient remaining disk space (96196362240 B)
[2025-06-04 08:09:20] 2025-06-04 12:09:02,508 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-06-04 08:09:20] 2025-06-04 12:09:02,508 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6679463715/HITS.45006595._056351.pool.root.1 since it does not exist
[2025-06-04 08:09:20] 2025-06-04 12:09:02,735 | INFO     | number of running child processes to parent process 1769617: 1
[2025-06-04 08:09:20] 2025-06-04 12:09:02,735 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:09:20] 2025-06-04 12:09:02,735 | INFO     | aborting job monitoring since job object (job id=6679463715) has expired
[2025-06-04 08:09:20] 2025-06-04 12:09:02,946 | INFO     | --- collectZombieJob: --- 10, [1769617]
[2025-06-04 08:09:20] 2025-06-04 12:09:02,946 | INFO     | zombie collector waiting for pid 1769617
[2025-06-04 08:09:20] 2025-06-04 12:09:02,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:09:20] 2025-06-04 12:09:02,946 | INFO     | collected zombie processes
[2025-06-04 08:09:20] 2025-06-04 12:09:02,946 | INFO     | will attempt to kill all subprocesses of pid=1769617
[2025-06-04 08:09:20] 2025-06-04 12:09:03,245 | INFO     | process IDs to be killed: [1769617] (in reverse order)
[2025-06-04 08:09:20] 2025-06-04 12:09:03,357 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:09:20] 2025-06-04 12:09:03,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:09:20] 2025-06-04 12:09:03,371 | INFO     | did not find any defunct processes belonging to 1769617
[2025-06-04 08:09:20] 2025-06-04 12:09:03,384 | INFO     | did not find any defunct processes belonging to 1769617
[2025-06-04 08:09:20] 2025-06-04 12:09:03,385 | INFO     | ready for new job
[2025-06-04 08:09:20] 2025-06-04 12:09:03,385 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:09:20] 2025-06-04 12:09:03,386 | INFO     | **************************************
[2025-06-04 08:09:20] 2025-06-04 12:09:03,386 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:09:20] 2025-06-04 12:09:03,386 | INFO     | **************************************
[2025-06-04 08:09:20] 2025-06-04 12:09:03,386 | INFO     | 
[2025-06-04 08:09:20] 2025-06-04 12:09:03,403 | INFO     | architecture information:
[2025-06-04 08:09:20] 2025-06-04 12:09:03,403 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:09:20] 2025-06-04 12:09:03,420 | INFO     | cat /etc/os-release:
[2025-06-04 08:09:20] NAME="CentOS Linux"
[2025-06-04 08:09:20] VERSION="7 (Core)"
[2025-06-04 08:09:20] ID="centos"
[2025-06-04 08:09:20] ID_LIKE="rhel fedora"
[2025-06-04 08:09:20] VERSION_ID="7"
[2025-06-04 08:09:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:09:20] ANSI_COLOR="0;31"
[2025-06-04 08:09:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:09:20] HOME_URL="https://www.centos.org/"
[2025-06-04 08:09:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:09:20] 
[2025-06-04 08:09:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:09:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:09:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:09:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:09:20] 
[2025-06-04 08:09:20] 2025-06-04 12:09:03,420 | INFO     | **************************************
[2025-06-04 08:09:20] 2025-06-04 12:09:03,922 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:09:20] 2025-06-04 12:09:03,941 | INFO     | sufficient remaining disk space (96196362240 B)
[2025-06-04 08:09:20] 2025-06-04 12:09:03,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:09:20] 2025-06-04 12:09:03,941 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:09:20] 2025-06-04 12:09:03,941 | INFO     | update_server=False
[2025-06-04 08:09:20] 2025-06-04 12:09:03,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:09:20] 2025-06-04 12:09:03,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:09:20] 2025-06-04 12:09:03,942 | INFO     | aborting loop
[2025-06-04 08:09:20] 2025-06-04 12:09:04,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:09:20] 2025-06-04 12:09:04,513 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:09:20] 2025-06-04 12:09:04,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:09:20] 2025-06-04 12:09:04,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:09:20] 2025-06-04 12:09:04,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:09:20] 2025-06-04 12:09:04,908 | INFO     | all data control threads have been joined
[2025-06-04 08:09:20] 2025-06-04 12:09:04,942 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:04,947 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:04,965 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:04,994 | INFO     | all job control threads have been joined
[2025-06-04 08:09:20] 2025-06-04 12:09:05,395 | INFO     | all payload control threads have been joined
[2025-06-04 08:09:20] 2025-06-04 12:09:05,574 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:05,586 | INFO     | [job] validate thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:05,831 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:05,910 | INFO     | [data] control thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:05,954 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:05,976 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:05,999 | INFO     | [job] control thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:06,041 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:06,401 | INFO     | [payload] control thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:06,714 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:06,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:09:20] 2025-06-04 12:09:07,932 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:08,090 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:14,155 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:09:20] 2025-06-04 12:09:15,162 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:09:20] 2025-06-04 12:09:15,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140282115909440)>', '<ExcThread(monitor, started 140281475229440)>']
[2025-06-04 08:09:20] 2025-06-04 12:09:15,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:09:20] 2025-06-04 12:09:15,559 | INFO     | [monitor] control thread has ended
[2025-06-04 08:09:20] 2025-06-04 12:09:20,557 | INFO     | all workflow threads have been joined
[2025-06-04 08:09:20] 2025-06-04 12:09:20,558 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:09:20] 2025-06-04 12:09:20,558 | INFO     | traces error code: 0
[2025-06-04 08:09:20] 2025-06-04 12:09:20,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:09:20] 2025-06-04 12:09:20,670 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:09:20] 2025-06-04 12:09:20,673 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:09:20] 2025-06-04 12:09:20,677 [wrapper] pilotpid: 1763218
[2025-06-04 08:09:20] 2025-06-04 12:09:20,680 [wrapper] Pilot exit status: 0
[2025-06-04 08:09:20] 2025-06-04 12:09:20,692 [wrapper] pandaids: 6679463715
[2025-06-04 08:09:20] 2025-06-04 12:09:20,786 [wrapper] cleanup supervisor_pilot 1941796 1763219
[2025-06-04 08:09:20] 2025-06-04 12:09:20,789 [wrapper] Test setup, not cleaning
[2025-06-04 08:09:20] 2025-06-04 12:09:20,792 [wrapper] apfmon messages muted
[2025-06-04 08:09:20] 2025-06-04 12:09:20,794 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:09:20] 2025-06-04 12:09:20,798 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:09:20]  *** Error codes and diagnostics ***
[2025-06-04 08:09:20]     "exeErrorCode": 0,
[2025-06-04 08:09:20]     "exeErrorDiag": "",
[2025-06-04 08:09:20]     "pilotErrorCode": 0,
[2025-06-04 08:09:20]     "pilotErrorDiag": "",
[2025-06-04 08:09:20]  *** Listing of results directory ***
[2025-06-04 08:09:20] total 385752
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 05:03 queuedata.json
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 05:04 pilot3.tar.gz
[2025-06-04 08:09:20] -rwx------. 1 boincer umatlas     37140 Jun  4 05:04 runpilot2-wrapper.sh
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:09:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:00 run_atlas
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:00 job.xml
[2025-06-04 08:09:20] -rw-r--r--. 2 boincer umatlas 212968513 Jun  4 07:00 EVNT.45006593._001794.pool.root.1
[2025-06-04 08:09:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:00 start_atlas.sh
[2025-06-04 08:09:20] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:00 shared
[2025-06-04 08:09:20] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 07:00 input.tar.gz
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:00 boinc_lockfile
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:00 pandaJob.out
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas    986812 Jun  4 07:01 agis_schedconf.cvmfs.json
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas   1603667 Jun  4 07:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:09:20] drwx------. 4 boincer umatlas      4096 Jun  4 07:01 pilot3
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas      6897 Jun  4 08:00 init_data.xml
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:08 boinc_task_state.xml
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas 176794944 Jun  4 08:08 HITS.45006595._056351.pool.root.1
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas        95 Jun  4 08:08 pilot_heartbeat.json
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas      1026 Jun  4 08:08 memory_monitor_summary.json
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas    295536 Jun  4 08:08 log.45006595._056351.job.log.tgz.1
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas      7686 Jun  4 08:09 heartbeat.json
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:09 boinc_mmap_file
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:09 wrapper_checkpoint.txt
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas      4425 Jun  4 08:09 pilotlog.txt
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas    408899 Jun  4 08:09 log.45006595._056351.job.log.1
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas       357 Jun  4 08:09 output.list
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:09 runtime_log
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas    727040 Jun  4 08:09 result.tar.gz
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 08:09 runtime_log.err
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas       651 Jun  4 08:09 QAIMDmTEzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYvnKDmIOfthn.diag
[2025-06-04 08:09:20] -rw-r--r--. 1 boincer umatlas     21768 Jun  4 08:09 stderr.txt
[2025-06-04 08:09:20] HITS file was successfully produced:
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas 176794944 Jun  4 08:08 shared/HITS.pool.root.1
[2025-06-04 08:09:20]  *** Contents of shared directory: ***
[2025-06-04 08:09:20] total 381864
[2025-06-04 08:09:20] -rw-r--r--. 2 boincer umatlas 212968513 Jun  4 07:00 ATLAS.root_0
[2025-06-04 08:09:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:00 start_atlas.sh
[2025-06-04 08:09:20] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 07:00 input.tar.gz
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas 176794944 Jun  4 08:08 HITS.pool.root.1
[2025-06-04 08:09:20] -rw-------. 1 boincer umatlas    727040 Jun  4 08:09 result.tar.gz
08:09:22 (1759618): run_atlas exited; CPU time 26872.759243
08:09:22 (1759618): called boinc_finish(0)

</stderr_txt>
]]>

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