Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:13:19 (221177): wrapper (7.7.26015): starting
07:13:19 (221177): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 07:13:19] Arguments: --nthreads 9
[2025-06-04 07:13:19] Threads: 9
[2025-06-04 07:13:19] Checking for CVMFS
[2025-06-04 07:13:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:13:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:13:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:13:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:13:20] 2.11.2.0 6612 28708 236876 146778 3 65 16727625 18432000 8012 130560 0 65318377 99.507 66227338 28150 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 07:13:20] CVMFS is ok
[2025-06-04 07:13:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:13:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:13:20] Further information can be found at the LHC@home message board.
[2025-06-04 07:13:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:13:20] Checking for apptainer binary...
[2025-06-04 07:13:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:13:20] Running /usr/bin/apptainer --version
[2025-06-04 07:13:20] apptainer version 1.3.2-1.el7
[2025-06-04 07:13:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:13:22] c-210-31-1.aglt2.org
[2025-06-04 07:13:22] apptainer works
[2025-06-04 07:13:22] Set ATHENA_PROC_NUMBER=9
[2025-06-04 07:13:22] Set ATHENA_CORE_NUMBER=9
[2025-06-04 07:13:22] Starting ATLAS job with PandaID=6679424105
[2025-06-04 07:13:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:36:20]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:36:20]  mtime=0
[2025-06-04 08:36:20]  protocol_id=None
[2025-06-04 08:36:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:36:20]  replicas=None
[2025-06-04 08:36:20]  scope=mc23_13p6TeV
[2025-06-04 08:36:20]  status=None
[2025-06-04 08:36:20]  status_code=0
[2025-06-04 08:36:20]  storage_token=
[2025-06-04 08:36:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679424105/log.45006595._056273.job.log.tgz.1
[2025-06-04 08:36:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/1e/log.45006595._056273.job.log.tgz.1
[2025-06-04 08:36:20]  workdir=None
[2025-06-04 08:36:20] ]
[2025-06-04 08:36:20] 2025-06-04 12:35:47,647 | INFO     | transferring file log.45006595._056273.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679424105/log.45006595._056273.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:36:20] 2025-06-04 12:35:47,647 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679424105/log.45006595._056273.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056273.job
[2025-06-04 08:36:20] 2025-06-04 12:35:47,670 | INFO     | adding to output.list: log.45006595._056273.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/1e/log.45006595._056273.job.log.tg
[2025-06-04 08:36:20] 2025-06-04 12:35:47,671 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:36:20] 2025-06-04 12:35:47,671 | INFO     | summary of transferred files:
[2025-06-04 08:36:20] 2025-06-04 12:35:47,671 | INFO     |  -- lfn=log.45006595._056273.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:36:20] 2025-06-04 12:35:47,671 | INFO     | stage-out finished correctly
[2025-06-04 08:36:20] 2025-06-04 12:35:47,767 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:36:20] 2025-06-04 12:35:49,464 | INFO     | monitor loop #368: job 0:6679424105 is in state 'finished'
[2025-06-04 08:36:20] 2025-06-04 12:35:49,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:36:20] 2025-06-04 12:35:49,575 | INFO     | job 6679424105 has state=finished
[2025-06-04 08:36:20] 2025-06-04 12:35:49,576 | INFO     | preparing for final server update for job 6679424105 in state='finished'
[2025-06-04 08:36:20] 2025-06-04 12:35:49,577 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:36:20] 2025-06-04 12:35:49,577 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:36:20] 2025-06-04 12:35:49,577 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:36:20] 2025-06-04 12:35:49,577 | INFO     | job 6679424105 has finished - writing final server update
[2025-06-04 08:36:20] 2025-06-04 12:35:49,577 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:36:20] 2025-06-04 12:35:49,582 | INFO     | executing command: lscpu
[2025-06-04 08:36:20] 2025-06-04 12:35:49,639 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:36:20] 2025-06-04 12:35:51,967 | INFO     | monitor loop #369: job 0:6679424105 is in state 'finished'
[2025-06-04 08:36:20] 2025-06-04 12:35:51,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:36:20] 2025-06-04 12:35:54,469 | INFO     | monitor loop #370: job 0:6679424105 is in state 'finished'
[2025-06-04 08:36:20] 2025-06-04 12:35:54,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:36:20] 2025-06-04 12:35:56,973 | INFO     | monitor loop #371: job 0:6679424105 is in state 'finished'
[2025-06-04 08:36:20] 2025-06-04 12:35:56,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:36:20] 2025-06-04 12:35:59,478 | INFO     | monitor loop #372: job 0:6679424105 is in state 'finished'
[2025-06-04 08:36:20] 2025-06-04 12:35:59,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:36:20] 2025-06-04 12:35:59,630 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:36:20] 2025-06-04 12:35:59,631 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679424105/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:36:20] 2025-06-04 12:35:59,631 | INFO     | extracted standard info from prmon json
[2025-06-04 08:36:20] 2025-06-04 12:35:59,632 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:36:20] 2025-06-04 12:35:59,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:36:20] 2025-06-04 12:35:59,632 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:36:20] 2025-06-04 12:35:59,632 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:36:20] 2025-06-04 12:35:59,634 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:36:20] 2025-06-04 12:35:59,635 | INFO     | sum of square deviations: 120605052.0
[2025-06-04 08:36:20] 2025-06-04 12:35:59,635 | INFO     | sum of deviations: -1570701322.0
[2025-06-04 08:36:20] 2025-06-04 12:35:59,635 | INFO     | mean x: 1749038180.0
[2025-06-04 08:36:20] 2025-06-04 12:35:59,635 | INFO     | mean y: 2569684.9589041094
[2025-06-04 08:36:20] 2025-06-04 12:35:59,635 | INFO     | -- intersect: 22781189120.85512
[2025-06-04 08:36:20] 2025-06-04 12:35:59,635 | INFO     | intersect: 22781189120.85512
[2025-06-04 08:36:20] 2025-06-04 12:35:59,635 | INFO     | chi2: 0.006080008249639731
[2025-06-04 08:36:20] 2025-06-04 12:35:59,636 | INFO     | -- intersect: 22781189120.85512
[2025-06-04 08:36:20] 2025-06-04 12:35:59,636 | INFO     | current memory leak: -13.02 B/s (using 73 data points, chi2=0.01)
[2025-06-04 08:36:20] 2025-06-04 12:35:59,636 | INFO     | ..............................
[2025-06-04 08:36:20] 2025-06-04 12:35:59,636 | INFO     | . Timing measurements:
[2025-06-04 08:36:20] 2025-06-04 12:35:59,636 | INFO     | . get job = 0 s
[2025-06-04 08:36:20] 2025-06-04 12:35:59,636 | INFO     | . initial setup = 2 s
[2025-06-04 08:36:20] 2025-06-04 12:35:59,636 | INFO     | . payload setup = 14 s
[2025-06-04 08:36:20] 2025-06-04 12:35:59,636 | INFO     | . stage-in = 0 s
[2025-06-04 08:36:20] 2025-06-04 12:35:59,636 | INFO     | . payload execution = 4878 s
[2025-06-04 08:36:20] 2025-06-04 12:35:59,637 | INFO     | . stage-out = 1 s
[2025-06-04 08:36:20] 2025-06-04 12:35:59,637 | INFO     | . log creation = 0 s
[2025-06-04 08:36:20] 2025-06-04 12:35:59,637 | INFO     | ..............................
[2025-06-04 08:36:20] 2025-06-04 12:36:00,230 | INFO     | 
[2025-06-04 08:36:20] 2025-06-04 12:36:00,230 | INFO     | job summary report
[2025-06-04 08:36:20] 2025-06-04 12:36:00,230 | INFO     | --------------------------------------------------
[2025-06-04 08:36:20] 2025-06-04 12:36:00,230 | INFO     | PanDA job id: 6679424105
[2025-06-04 08:36:20] 2025-06-04 12:36:00,230 | INFO     | task id: 45006595
[2025-06-04 08:36:20] 2025-06-04 12:36:00,231 | INFO     | errors: (none)
[2025-06-04 08:36:20] 2025-06-04 12:36:00,231 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:36:20] 2025-06-04 12:36:00,231 | INFO     | pilot state: finished 
[2025-06-04 08:36:20] 2025-06-04 12:36:00,231 | INFO     | transexitcode: 0
[2025-06-04 08:36:20] 2025-06-04 12:36:00,231 | INFO     | exeerrorcode: 0
[2025-06-04 08:36:20] 2025-06-04 12:36:00,231 | INFO     | exeerrordiag: 
[2025-06-04 08:36:20] 2025-06-04 12:36:00,231 | INFO     | exitcode: 0
[2025-06-04 08:36:20] 2025-06-04 12:36:00,231 | INFO     | exitmsg: OK
[2025-06-04 08:36:20] 2025-06-04 12:36:00,231 | INFO     | cpuconsumptiontime: 34695 s
[2025-06-04 08:36:20] 2025-06-04 12:36:00,231 | INFO     | nevents: 400
[2025-06-04 08:36:20] 2025-06-04 12:36:00,231 | INFO     | neventsw: 0
[2025-06-04 08:36:20] 2025-06-04 12:36:00,231 | INFO     | pid: 231788
[2025-06-04 08:36:20] 2025-06-04 12:36:00,232 | INFO     | pgrp: 231788
[2025-06-04 08:36:20] 2025-06-04 12:36:00,232 | INFO     | corecount: 9
[2025-06-04 08:36:20] 2025-06-04 12:36:00,232 | INFO     | event service: False
[2025-06-04 08:36:20] 2025-06-04 12:36:00,232 | INFO     | sizes: {0: 2405132, 9: 2405338, 11: 2405366, 4896: 2431511, 4898: 2440508, 4910: 2440622}
[2025-06-04 08:36:20] 2025-06-04 12:36:00,232 | INFO     | --------------------------------------------------
[2025-06-04 08:36:20] 2025-06-04 12:36:00,232 | INFO     | 
[2025-06-04 08:36:20] 2025-06-04 12:36:00,232 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:36:20] 2025-06-04 12:36:00,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,262 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,262 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,262 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,264 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:36:20] 2025-06-04 12:36:00,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,264 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:36:20] 2025-06-04 12:36:00,264 | INFO     | job 6679424105 has completed (purged errors)
[2025-06-04 08:36:20] 2025-06-04 12:36:00,264 | INFO     | overall cleanup function is called
[2025-06-04 08:36:20] 2025-06-04 12:36:01,272 | INFO     | --- collectZombieJob: --- 10, [231788]
[2025-06-04 08:36:20] 2025-06-04 12:36:01,272 | INFO     | zombie collector waiting for pid 231788
[2025-06-04 08:36:20] 2025-06-04 12:36:01,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:36:20] 2025-06-04 12:36:01,273 | INFO     | collected zombie processes
[2025-06-04 08:36:20] 2025-06-04 12:36:01,273 | INFO     | will attempt to kill all subprocesses of pid=231788
[2025-06-04 08:36:20] 2025-06-04 12:36:01,453 | INFO     | process IDs to be killed: [231788] (in reverse order)
[2025-06-04 08:36:20] 2025-06-04 12:36:01,540 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:36:20] 2025-06-04 12:36:01,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:36:20] 2025-06-04 12:36:01,547 | INFO     | did not find any defunct processes belonging to 231788
[2025-06-04 08:36:20] 2025-06-04 12:36:01,553 | INFO     | did not find any defunct processes belonging to 231788
[2025-06-04 08:36:20] 2025-06-04 12:36:01,553 | INFO     | ready for new job
[2025-06-04 08:36:20] 2025-06-04 12:36:01,553 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:36:20] 2025-06-04 12:36:01,555 | INFO     | **************************************
[2025-06-04 08:36:20] 2025-06-04 12:36:01,555 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:36:20] 2025-06-04 12:36:01,555 | INFO     | **************************************
[2025-06-04 08:36:20] 2025-06-04 12:36:01,555 | INFO     | 
[2025-06-04 08:36:20] 2025-06-04 12:36:01,557 | INFO     | architecture information:
[2025-06-04 08:36:20] 2025-06-04 12:36:01,558 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:36:20] 2025-06-04 12:36:01,574 | INFO     | cat /etc/os-release:
[2025-06-04 08:36:20] NAME="CentOS Linux"
[2025-06-04 08:36:20] VERSION="7 (Core)"
[2025-06-04 08:36:20] ID="centos"
[2025-06-04 08:36:20] ID_LIKE="rhel fedora"
[2025-06-04 08:36:20] VERSION_ID="7"
[2025-06-04 08:36:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:36:20] ANSI_COLOR="0;31"
[2025-06-04 08:36:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:36:20] HOME_URL="https://www.centos.org/"
[2025-06-04 08:36:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:36:20] 
[2025-06-04 08:36:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:36:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:36:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:36:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:36:20] 
[2025-06-04 08:36:20] 2025-06-04 12:36:01,574 | INFO     | **************************************
[2025-06-04 08:36:20] 2025-06-04 12:36:02,076 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:36:20] 2025-06-04 12:36:02,105 | INFO     | sufficient remaining disk space (56459526144 B)
[2025-06-04 08:36:20] 2025-06-04 12:36:02,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:36:20] 2025-06-04 12:36:02,105 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:36:20] 2025-06-04 12:36:02,105 | INFO     | update_server=False
[2025-06-04 08:36:20] 2025-06-04 12:36:02,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:36:20] 2025-06-04 12:36:02,106 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:36:20] 2025-06-04 12:36:02,106 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:36:20] 2025-06-04 12:36:02,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:36:20] 2025-06-04 12:36:02,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:36:20] 2025-06-04 12:36:02,272 | INFO     | all data control threads have been joined
[2025-06-04 08:36:20] 2025-06-04 12:36:02,372 | INFO     | all job control threads have been joined
[2025-06-04 08:36:20] 2025-06-04 12:36:02,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:36:20] 2025-06-04 12:36:02,989 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:36:20] 2025-06-04 12:36:02,989 | INFO     | aborting loop
[2025-06-04 08:36:20] 2025-06-04 12:36:03,110 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:03,178 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:03,278 | INFO     | [data] control thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:03,283 | INFO     | all payload control threads have been joined
[2025-06-04 08:36:20] 2025-06-04 12:36:03,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:36:20] 2025-06-04 12:36:03,378 | INFO     | [job] control thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:03,609 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:03,630 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:03,925 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:03,995 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:04,231 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:04,261 | INFO     | [job] validate thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:04,268 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:04,284 | INFO     | [payload] control thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:04,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:36:20] 2025-06-04 12:36:05,295 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:05,752 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:06,846 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:12,388 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:36:20] 2025-06-04 12:36:13,394 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:36:20] 2025-06-04 12:36:15,206 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140287470556992)>', '<ExcThread(monitor, started 140287028479744)>']
[2025-06-04 08:36:20] 2025-06-04 12:36:16,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:36:20] 2025-06-04 12:36:16,178 | INFO     | [monitor] control thread has ended
[2025-06-04 08:36:20] 2025-06-04 12:36:20,231 | INFO     | all workflow threads have been joined
[2025-06-04 08:36:20] 2025-06-04 12:36:20,231 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:36:20] 2025-06-04 12:36:20,232 | INFO     | traces error code: 0
[2025-06-04 08:36:20] 2025-06-04 12:36:20,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:36:20] 2025-06-04 12:36:20,423 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:36:20] 2025-06-04 12:36:20,429 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:36:20] 2025-06-04 12:36:20,437 [wrapper] pilotpid: 225272
[2025-06-04 08:36:20] 2025-06-04 12:36:20,446 [wrapper] Pilot exit status: 0
[2025-06-04 08:36:20] 2025-06-04 12:36:20,476 [wrapper] pandaids: 6679424105
[2025-06-04 08:36:20] 2025-06-04 12:36:20,545 [wrapper] cleanup supervisor_pilot 100495 225273
[2025-06-04 08:36:20] 2025-06-04 12:36:20,557 [wrapper] Test setup, not cleaning
[2025-06-04 08:36:20] 2025-06-04 12:36:20,565 [wrapper] apfmon messages muted
[2025-06-04 08:36:20] 2025-06-04 12:36:20,574 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:36:20] 2025-06-04 12:36:20,577 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:36:20]  *** Error codes and diagnostics ***
[2025-06-04 08:36:20]     "exeErrorCode": 0,
[2025-06-04 08:36:20]     "exeErrorDiag": "",
[2025-06-04 08:36:20]     "pilotErrorCode": 0,
[2025-06-04 08:36:20]     "pilotErrorDiag": "",
[2025-06-04 08:36:20]  *** Listing of results directory ***
[2025-06-04 08:36:20] total 384912
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 08:36:20] -rwx------ 1 boincer umatlas     37140 Jun  4 05:03 runpilot2-wrapper.sh
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 05:03 queuedata.json
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:36:20] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:13 run_atlas
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:13 job.xml
[2025-06-04 08:36:20] -rw-r--r-- 2 boincer umatlas 213850544 Jun  4 07:13 EVNT.45006593._001793.pool.root.1
[2025-06-04 08:36:20] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:13 shared
[2025-06-04 08:36:20] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 07:13 input.tar.gz
[2025-06-04 08:36:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:13 start_atlas.sh
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:13 boinc_lockfile
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 07:13 pandaJob.out
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas    986812 Jun  4 07:13 agis_schedconf.cvmfs.json
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas   1603667 Jun  4 07:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:36:20] drwx------ 4 boincer umatlas      4096 Jun  4 07:13 pilot3
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas      6354 Jun  4 08:30 init_data.xml
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas       529 Jun  4 08:34 boinc_task_state.xml
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas 174886896 Jun  4 08:35 HITS.45006595._056273.pool.root.1
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas        95 Jun  4 08:35 pilot_heartbeat.json
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas      1058 Jun  4 08:35 memory_monitor_summary.json
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas    309960 Jun  4 08:35 log.45006595._056273.job.log.tgz.1
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas      7750 Jun  4 08:35 heartbeat.json
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:36 wrapper_checkpoint.txt
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:36 boinc_mmap_file
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas      4548 Jun  4 08:36 pilotlog.txt
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas    483197 Jun  4 08:36 log.45006595._056273.job.log.1
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas       357 Jun  4 08:36 output.list
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:36 runtime_log
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas    808960 Jun  4 08:36 result.tar.gz
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 08:36 runtime_log.err
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas       660 Jun  4 08:36 p1xMDmdCzg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmX0aKDm4m2CEo.diag
[2025-06-04 08:36:20] -rw-r--r-- 1 boincer umatlas     21629 Jun  4 08:36 stderr.txt
[2025-06-04 08:36:20] HITS file was successfully produced:
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas 174886896 Jun  4 08:35 shared/HITS.pool.root.1
[2025-06-04 08:36:20]  *** Contents of shared directory: ***
[2025-06-04 08:36:20] total 380940
[2025-06-04 08:36:20] -rw-r--r-- 2 boincer umatlas 213850544 Jun  4 07:13 ATLAS.root_0
[2025-06-04 08:36:20] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 07:13 input.tar.gz
[2025-06-04 08:36:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:13 start_atlas.sh
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas 174886896 Jun  4 08:35 HITS.pool.root.1
[2025-06-04 08:36:20] -rw------- 1 boincer umatlas    808960 Jun  4 08:36 result.tar.gz
08:36:22 (221177): run_atlas exited; CPU time 34765.341946
08:36:22 (221177): called boinc_finish(0)

</stderr_txt>
]]>

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