Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
15:48:07 (2435029): wrapper (7.7.26015): starting
15:48:07 (2435029): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 15:48:07] Arguments: --nthreads 12
[2025-06-06 15:48:07] Threads: 12
[2025-06-06 15:48:07] Checking for CVMFS
[2025-06-06 15:48:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 15:48:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 15:48:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 15:48:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 15:48:18] 2.13.0.0 2409195 89 45444 146860 0 56 2352857 4096001 0 130560 0 68269 99.994 2695 36 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2025-06-06 15:48:18] CVMFS is ok
[2025-06-06 15:48:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 15:48:18] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 15:48:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 15:48:18] Further information can be found at the LHC@home message board.
[2025-06-06 15:48:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 15:48:18] Checking for apptainer binary...
[2025-06-06 15:48:18] apptainer is not installed, using version from CVMFS
[2025-06-06 15:48:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 15:48:19] ws24
[2025-06-06 15:48:19] apptainer works
[2025-06-06 15:48:19] Set ATHENA_PROC_NUMBER=12
[2025-06-06 15:48:19] Set ATHENA_CORE_NUMBER=12
[2025-06-06 15:48:19] Starting ATLAS job with PandaID=6678364363
[2025-06-06 15:48:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 17:18:01]  *** The last 200 lines of the pilot log: ***
[2025-06-06 17:18:01] ]
[2025-06-06 17:18:01] 2025-06-06 15:09:33,700 | INFO     | transferring file log.45006595._053863.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6678364363/log.45006595._053863.job.log.tgz.1 to /var/lib/boinc
[2025-06-06 17:18:01] 2025-06-06 15:09:33,700 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6678364363/log.45006595._053863.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.450065
[2025-06-06 17:18:01] 2025-06-06 15:09:33,751 | INFO     | adding to output.list: log.45006595._053863.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/bf/log.45006595._053863.job.log.tg
[2025-06-06 17:18:01] 2025-06-06 15:09:33,752 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 17:18:01] 2025-06-06 15:09:33,753 | INFO     | summary of transferred files:
[2025-06-06 17:18:01] 2025-06-06 15:09:33,753 | INFO     |  -- lfn=log.45006595._053863.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 17:18:01] 2025-06-06 15:09:33,753 | INFO     | stage-out finished correctly
[2025-06-06 17:18:01] 2025-06-06 15:09:34,041 | INFO     | monitor loop #350: job 0:6678364363 is in state 'finished'
[2025-06-06 17:18:01] 2025-06-06 15:09:34,041 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:18:01] 2025-06-06 15:09:36,543 | INFO     | monitor loop #351: job 0:6678364363 is in state 'finished'
[2025-06-06 17:18:01] 2025-06-06 15:09:36,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:18:01] 2025-06-06 15:09:37,249 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 17:18:01] 2025-06-06 15:09:39,046 | INFO     | monitor loop #352: job 0:6678364363 is in state 'finished'
[2025-06-06 17:18:01] 2025-06-06 15:09:39,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:18:01] 2025-06-06 15:09:40,232 | INFO     | job 6678364363 has state=finished
[2025-06-06 17:18:01] 2025-06-06 15:09:40,232 | INFO     | preparing for final server update for job 6678364363 in state='finished'
[2025-06-06 17:18:01] 2025-06-06 15:09:40,233 | INFO     | this job has now completed (state=finished)
[2025-06-06 17:18:01] 2025-06-06 15:09:40,233 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 17:18:01] 2025-06-06 15:09:40,233 | INFO     | log transfer has been attempted: DONE
[2025-06-06 17:18:01] 2025-06-06 15:09:40,233 | INFO     | job 6678364363 has finished - writing final server update
[2025-06-06 17:18:01] 2025-06-06 15:09:40,234 | INFO     | total number of processed events: 400 (read)
[2025-06-06 17:18:01] 2025-06-06 15:09:40,245 | INFO     | executing command: lscpu
[2025-06-06 17:18:01] 2025-06-06 15:09:40,291 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 17:18:01] 2025-06-06 15:09:41,551 | INFO     | monitor loop #353: job 0:6678364363 is in state 'finished'
[2025-06-06 17:18:01] 2025-06-06 15:09:41,552 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:18:01] 2025-06-06 15:09:44,055 | INFO     | monitor loop #354: job 0:6678364363 is in state 'finished'
[2025-06-06 17:18:01] 2025-06-06 15:09:44,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:18:01] 2025-06-06 15:09:45,498 | INFO     | PID=2438703 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 17:18:01] 2025-06-06 15:09:46,559 | INFO     | monitor loop #355: job 0:6678364363 is in state 'finished'
[2025-06-06 17:18:01] 2025-06-06 15:09:46,560 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:18:01] 2025-06-06 15:09:49,063 | INFO     | monitor loop #356: job 0:6678364363 is in state 'finished'
[2025-06-06 17:18:01] 2025-06-06 15:09:49,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:18:01] 2025-06-06 15:09:51,567 | INFO     | monitor loop #357: job 0:6678364363 is in state 'finished'
[2025-06-06 17:18:01] 2025-06-06 15:09:51,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:18:01] 2025-06-06 15:09:54,070 | INFO     | monitor loop #358: job 0:6678364363 is in state 'finished'
[2025-06-06 17:18:01] 2025-06-06 15:09:54,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:18:01] 2025-06-06 15:09:56,574 | INFO     | monitor loop #359: job 0:6678364363 is in state 'finished'
[2025-06-06 17:18:01] 2025-06-06 15:09:56,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:18:01] 2025-06-06 15:09:57,304 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 17:18:01] 2025-06-06 15:09:57,304 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678364363/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 17:18:01] 2025-06-06 15:09:57,307 | INFO     | extracted standard info from prmon json
[2025-06-06 17:18:01] 2025-06-06 15:09:57,307 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 17:18:01] 2025-06-06 15:09:57,307 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 17:18:01] 2025-06-06 15:09:57,308 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 17:18:01] 2025-06-06 15:09:57,308 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 17:18:01] 2025-06-06 15:09:57,312 | INFO     | fitting pss+swap vs Time
[2025-06-06 17:18:01] 2025-06-06 15:09:57,321 | INFO     | sum of square deviations: 115715658.0
[2025-06-06 17:18:01] 2025-06-06 15:09:57,325 | INFO     | sum of deviations: -575169792.9999999
[2025-06-06 17:18:01] 2025-06-06 15:09:57,325 | INFO     | mean x: 1749220235.5
[2025-06-06 17:18:01] 2025-06-06 15:09:57,325 | INFO     | mean y: 2708133.4444444445
[2025-06-06 17:18:01] 2025-06-06 15:09:57,326 | INFO     | -- intersect: 8697284633.747852
[2025-06-06 17:18:01] 2025-06-06 15:09:57,326 | INFO     | intersect: 8697284633.747852
[2025-06-06 17:18:01] 2025-06-06 15:09:57,326 | INFO     | chi2: 0.03701328306303325
[2025-06-06 17:18:01] 2025-06-06 15:09:57,326 | INFO     | -- intersect: 8697284633.747852
[2025-06-06 17:18:01] 2025-06-06 15:09:57,326 | INFO     | current memory leak: -4.97 B/s (using 72 data points, chi2=0.04)
[2025-06-06 17:18:01] 2025-06-06 15:09:57,327 | INFO     | ..............................
[2025-06-06 17:18:01] 2025-06-06 15:09:57,327 | INFO     | . Timing measurements:
[2025-06-06 17:18:01] 2025-06-06 15:09:57,327 | INFO     | . get job = 0 s
[2025-06-06 17:18:01] 2025-06-06 15:09:57,327 | INFO     | . initial setup = 15 s
[2025-06-06 17:18:01] 2025-06-06 15:09:57,327 | INFO     | . payload setup = 9 s
[2025-06-06 17:18:01] 2025-06-06 15:09:57,327 | INFO     | . stage-in = 0 s
[2025-06-06 17:18:01] 2025-06-06 15:09:57,327 | INFO     | . payload execution = 4809 s
[2025-06-06 17:18:01] 2025-06-06 15:09:57,327 | INFO     | . stage-out = 0 s
[2025-06-06 17:18:01] 2025-06-06 15:09:57,327 | INFO     | . log creation = 0 s
[2025-06-06 17:18:01] 2025-06-06 15:09:57,328 | INFO     | ..............................
[2025-06-06 17:18:01] 2025-06-06 15:09:57,776 | INFO     | 
[2025-06-06 17:18:01] 2025-06-06 15:09:57,776 | INFO     | job summary report
[2025-06-06 17:18:01] 2025-06-06 15:09:57,776 | INFO     | --------------------------------------------------
[2025-06-06 17:18:01] 2025-06-06 15:09:57,776 | INFO     | PanDA job id: 6678364363
[2025-06-06 17:18:01] 2025-06-06 15:09:57,777 | INFO     | task id: 45006595
[2025-06-06 17:18:01] 2025-06-06 15:09:57,777 | INFO     | errors: (none)
[2025-06-06 17:18:01] 2025-06-06 15:09:57,777 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 17:18:01] 2025-06-06 15:09:57,777 | INFO     | pilot state: finished 
[2025-06-06 17:18:01] 2025-06-06 15:09:57,777 | INFO     | transexitcode: 0
[2025-06-06 17:18:01] 2025-06-06 15:09:57,777 | INFO     | exeerrorcode: 0
[2025-06-06 17:18:01] 2025-06-06 15:09:57,777 | INFO     | exeerrordiag: 
[2025-06-06 17:18:01] 2025-06-06 15:09:57,777 | INFO     | exitcode: 0
[2025-06-06 17:18:01] 2025-06-06 15:09:57,777 | INFO     | exitmsg: OK
[2025-06-06 17:18:01] 2025-06-06 15:09:57,777 | INFO     | cpuconsumptiontime: 38309 s
[2025-06-06 17:18:01] 2025-06-06 15:09:57,777 | INFO     | nevents: 400
[2025-06-06 17:18:01] 2025-06-06 15:09:57,778 | INFO     | neventsw: 0
[2025-06-06 17:18:01] 2025-06-06 15:09:57,778 | INFO     | pid: 2445283
[2025-06-06 17:18:01] 2025-06-06 15:09:57,778 | INFO     | pgrp: 2445283
[2025-06-06 17:18:01] 2025-06-06 15:09:57,778 | INFO     | corecount: 12
[2025-06-06 17:18:01] 2025-06-06 15:09:57,778 | INFO     | event service: False
[2025-06-06 17:18:01] 2025-06-06 15:09:57,778 | INFO     | sizes: {0: 2396514, 1: 2397377, 2: 2397377, 11: 2397611, 12: 2397639, 4822: 2423765, 4823: 2432720, 4827: 2432776, 4847: 2432946}
[2025-06-06 17:18:01] 2025-06-06 15:09:57,778 | INFO     | --------------------------------------------------
[2025-06-06 17:18:01] 2025-06-06 15:09:57,778 | INFO     | 
[2025-06-06 17:18:01] 2025-06-06 15:09:57,778 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 17:18:01] 2025-06-06 15:09:57,835 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,836 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,836 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,836 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,837 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,837 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 17:18:01] 2025-06-06 15:09:57,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,837 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 17:18:01] 2025-06-06 15:09:57,837 | INFO     | job 6678364363 has completed (purged errors)
[2025-06-06 17:18:01] 2025-06-06 15:09:57,838 | INFO     | overall cleanup function is called
[2025-06-06 17:18:01] 2025-06-06 15:09:58,848 | INFO     | --- collectZombieJob: --- 10, [2445283]
[2025-06-06 17:18:01] 2025-06-06 15:09:58,848 | INFO     | zombie collector waiting for pid 2445283
[2025-06-06 17:18:01] 2025-06-06 15:09:58,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 17:18:01] 2025-06-06 15:09:58,849 | INFO     | collected zombie processes
[2025-06-06 17:18:01] 2025-06-06 15:09:58,849 | INFO     | will attempt to kill all subprocesses of pid=2445283
[2025-06-06 17:18:01] 2025-06-06 15:09:59,131 | INFO     | process IDs to be killed: [2445283] (in reverse order)
[2025-06-06 17:18:01] 2025-06-06 15:09:59,284 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 17:18:01] 2025-06-06 15:09:59,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 17:18:01] 2025-06-06 15:09:59,293 | INFO     | did not find any defunct processes belonging to 2445283
[2025-06-06 17:18:01] 2025-06-06 15:09:59,301 | INFO     | did not find any defunct processes belonging to 2445283
[2025-06-06 17:18:01] 2025-06-06 15:09:59,302 | INFO     | ready for new job
[2025-06-06 17:18:01] 2025-06-06 15:09:59,302 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 17:18:01] 2025-06-06 15:09:59,303 | INFO     | **************************************
[2025-06-06 17:18:01] 2025-06-06 15:09:59,304 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 17:18:01] 2025-06-06 15:09:59,304 | INFO     | **************************************
[2025-06-06 17:18:01] 2025-06-06 15:09:59,304 | INFO     | 
[2025-06-06 17:18:01] 2025-06-06 15:09:59,305 | INFO     | architecture information:
[2025-06-06 17:18:01] 2025-06-06 15:09:59,307 | INFO     | executing command: cat /etc/os-release
[2025-06-06 17:18:01] 2025-06-06 15:09:59,350 | INFO     | cat /etc/os-release:
[2025-06-06 17:18:01] NAME="CentOS Linux"
[2025-06-06 17:18:01] VERSION="7 (Core)"
[2025-06-06 17:18:01] ID="centos"
[2025-06-06 17:18:01] ID_LIKE="rhel fedora"
[2025-06-06 17:18:01] VERSION_ID="7"
[2025-06-06 17:18:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 17:18:01] ANSI_COLOR="0;31"
[2025-06-06 17:18:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 17:18:01] HOME_URL="https://www.centos.org/"
[2025-06-06 17:18:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 17:18:01] 
[2025-06-06 17:18:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 17:18:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 17:18:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 17:18:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 17:18:01] 
[2025-06-06 17:18:01] 2025-06-06 15:09:59,351 | INFO     | **************************************
[2025-06-06 17:18:01] 2025-06-06 15:09:59,853 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 17:18:01] 2025-06-06 15:09:59,885 | INFO     | sufficient remaining disk space (22671261696 B)
[2025-06-06 17:18:01] 2025-06-06 15:09:59,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 17:18:01] 2025-06-06 15:09:59,885 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 17:18:01] 2025-06-06 15:09:59,886 | INFO     | update_server=False
[2025-06-06 17:18:01] 2025-06-06 15:09:59,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 17:18:01] 2025-06-06 15:09:59,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 17:18:01] 2025-06-06 15:09:59,886 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 17:18:01] 2025-06-06 15:09:59,888 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 17:18:01] 2025-06-06 15:09:59,888 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 17:18:01] 2025-06-06 15:09:59,888 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 17:18:01] 2025-06-06 15:10:00,083 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:18:01] 2025-06-06 15:10:00,083 | INFO     | aborting loop
[2025-06-06 17:18:01] 2025-06-06 15:10:00,506 | INFO     | all data control threads have been joined
[2025-06-06 17:18:01] 2025-06-06 15:10:00,893 | INFO     | [job] retrieve thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:01,068 | INFO     | [payload] validate_post thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:01,091 | INFO     | [job] job monitor thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:01,225 | INFO     | [job] validate thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:01,256 | INFO     | all payload control threads have been joined
[2025-06-06 17:18:01] 2025-06-06 15:10:01,317 | INFO     | all job control threads have been joined
[2025-06-06 17:18:01] 2025-06-06 15:10:01,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 17:18:01] 2025-06-06 15:10:01,476 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:01,512 | INFO     | [data] control thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:01,892 | INFO     | [data] copytool_out thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:02,102 | INFO     | [data] copytool_in thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:02,176 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:02,264 | INFO     | [payload] control thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:02,281 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:02,322 | INFO     | [job] control thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:02,346 | INFO     | [payload] failed_post thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:02,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:18:01] 2025-06-06 15:10:03,475 | INFO     | [job] queue monitor thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:05,392 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:09,967 | INFO     | job.realtimelogging is not enabled
[2025-06-06 17:18:01] 2025-06-06 15:10:10,974 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 17:18:01] 2025-06-06 15:10:12,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130583019206464)>', '<ExcThread(monitor, started 130582474372864)>']
[2025-06-06 17:18:01] 2025-06-06 15:10:13,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 17:18:01] 2025-06-06 15:10:13,966 | INFO     | [monitor] control thread has ended
[2025-06-06 17:18:01] 2025-06-06 15:10:18,001 | INFO     | all workflow threads have been joined
[2025-06-06 17:18:01] 2025-06-06 15:10:18,001 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 17:18:01] 2025-06-06 15:10:18,002 | INFO     | traces error code: 0
[2025-06-06 17:18:01] 2025-06-06 15:10:18,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 17:18:01] 2025-06-06 15:10:18,206 [wrapper] ==== pilot stdout END ====
[2025-06-06 17:18:01] 2025-06-06 15:10:18,217 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 17:18:01] 2025-06-06 15:10:18,223 [wrapper] pilotpid: 2438703
[2025-06-06 17:18:01] 2025-06-06 15:10:18,236 [wrapper] Pilot exit status: 0
[2025-06-06 17:18:01] 2025-06-06 15:10:18,261 [wrapper] pandaids: 6678364363
[2025-06-06 17:18:01] 2025-06-06 15:10:18,356 [wrapper] cleanup supervisor_pilot 2459991 2438704
[2025-06-06 17:18:01] 2025-06-06 15:10:18,364 [wrapper] Test setup, not cleaning
[2025-06-06 17:18:01] 2025-06-06 15:10:18,369 [wrapper] apfmon messages muted
[2025-06-06 17:18:01] 2025-06-06 15:10:18,381 [wrapper] ==== wrapper stdout END ====
[2025-06-06 17:18:01] 2025-06-06 15:10:18,391 [wrapper] ==== wrapper stderr END ====
[2025-06-06 17:18:01]  *** Error codes and diagnostics ***
[2025-06-06 17:18:01]     "exeErrorCode": 0,
[2025-06-06 17:18:01]     "exeErrorDiag": "",
[2025-06-06 17:18:01]     "pilotErrorCode": 0,
[2025-06-06 17:18:01]     "pilotErrorDiag": "",
[2025-06-06 17:18:01]  *** Listing of results directory ***
[2025-06-06 17:18:01] total 390996
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc      5111 Jun  4 08:18 queuedata.json
[2025-06-06 17:18:01] -rwx------ 1 boinc boinc     37140 Jun  4 08:20 runpilot2-wrapper.sh
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc       100 Jun  6 15:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 17:18:01] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 15:48 run_atlas
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc       105 Jun  6 15:48 job.xml
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc      9498 Jun  6 15:48 init_data.xml
[2025-06-06 17:18:01] -rw-r--r-- 2 boinc boinc 217035785 Jun  6 15:48 EVNT.45006593._002156.pool.root.1
[2025-06-06 17:18:01] drwxrwx--x 2 boinc boinc      4096 Jun  6 15:48 shared
[2025-06-06 17:18:01] -rw-r--r-- 2 boinc boinc    508886 Jun  6 15:48 input.tar.gz
[2025-06-06 17:18:01] -rw-r--r-- 2 boinc boinc     15093 Jun  6 15:48 start_atlas.sh
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc         0 Jun  6 15:48 boinc_lockfile
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc      2525 Jun  6 15:48 pandaJob.out
[2025-06-06 17:18:01] -rw------- 1 boinc boinc    985728 Jun  6 15:48 agis_schedconf.cvmfs.json
[2025-06-06 17:18:01] -rw------- 1 boinc boinc   1598969 Jun  6 15:48 agis_ddmendpoints.agis.ALL.json
[2025-06-06 17:18:01] drwx------ 4 boinc boinc      4096 Jun  6 15:48 pilot3
[2025-06-06 17:18:01] -rw------- 1 boinc boinc 177877605 Jun  6 17:08 HITS.45006595._053863.pool.root.1
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc       529 Jun  6 17:09 boinc_task_state.xml
[2025-06-06 17:18:01] -rw------- 1 boinc boinc      1035 Jun  6 17:09 memory_monitor_summary.json
[2025-06-06 17:18:01] -rw------- 1 boinc boinc        95 Jun  6 17:09 pilot_heartbeat.json
[2025-06-06 17:18:01] -rw------- 1 boinc boinc    357137 Jun  6 17:09 log.45006595._053863.job.log.tgz.1
[2025-06-06 17:18:01] -rw------- 1 boinc boinc      7669 Jun  6 17:09 heartbeat.json
[2025-06-06 17:18:01] -rw------- 1 boinc boinc      4555 Jun  6 17:10 pilotlog.txt
[2025-06-06 17:18:01] -rw------- 1 boinc boinc    457203 Jun  6 17:10 log.45006595._053863.job.log.1
[2025-06-06 17:18:01] -rw------- 1 boinc boinc       357 Jun  6 17:10 output.list
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc       620 Jun  6 17:10 runtime_log
[2025-06-06 17:18:01] -rw------- 1 boinc boinc    829440 Jun  6 17:10 result.tar.gz
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc      8686 Jun  6 17:10 runtime_log.err
[2025-06-06 17:18:01] -rw------- 1 boinc boinc       643 Jun  6 17:10 dtlNDmpfwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4RnKDmxAPrzn.diag
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc      8192 Jun  6 17:18 boinc_mmap_file
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc        27 Jun  6 17:18 wrapper_checkpoint.txt
[2025-06-06 17:18:01] -rw-r--r-- 1 boinc boinc     22588 Jun  6 17:18 stderr.txt
[2025-06-06 17:18:01] HITS file was successfully produced:
[2025-06-06 17:18:01] -rw------- 1 boinc boinc 177877605 Jun  6 17:08 shared/HITS.pool.root.1
[2025-06-06 17:18:01]  *** Contents of shared directory: ***
[2025-06-06 17:18:01] total 387000
[2025-06-06 17:18:01] -rw-r--r-- 2 boinc boinc 217035785 Jun  6 15:48 ATLAS.root_0
[2025-06-06 17:18:01] -rw-r--r-- 2 boinc boinc    508886 Jun  6 15:48 input.tar.gz
[2025-06-06 17:18:01] -rw-r--r-- 2 boinc boinc     15093 Jun  6 15:48 start_atlas.sh
[2025-06-06 17:18:01] -rw------- 1 boinc boinc 177877605 Jun  6 17:08 HITS.pool.root.1
[2025-06-06 17:18:01] -rw------- 1 boinc boinc    829440 Jun  6 17:10 result.tar.gz
17:18:03 (2435029): run_atlas exited; CPU time 38135.350014
17:18:03 (2435029): called boinc_finish(0)

</stderr_txt>
]]>

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